Arthrogryposis syndrome
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Summary
Arthrogryposis syndrome (MONDO:0015225) is a disease (an umbrella term covering 6 Mondo subtypes) with 8 cohort genes. The dominant Reactome pathway is Striated Muscle Contraction (3 cohort genes).
At a glance
- Umbrella term: 6 Mondo subtypes
- Cohort genes: 8
- ClinVar variants: 13
Clinical features
No curated clinical features (Orphanet) for this disease.
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | arthrogryposis syndrome |
| Mondo ID | MONDO:0015225 |
| Orphanet | 109007 |
| ICD-11 | 1692487835 |
| GARD | 0019870 |
| Is cancer (heuristic) | no |
Also known as: arthrogryposis syndrome
Data availability: 13 ClinVar variants · 2 GenCC gene-disease records · 2 cell lines.
Disease family
An umbrella term covering 6 Mondo subtypes.
Classification path: disease › human disease › disease by developmental or physiological process › disorder of development or morphogenesis › developmental defect during embryogenesis › congenital limb malformation › arthrogryposis syndrome
Related subtypes (106): Adams-Oliver syndrome, ADULT syndrome, Hypoglossia-hypodactyly syndrome, ankyloblepharon-ectodermal defects-cleft lip/palate syndrome, Cooks syndrome, Townes-Brocks syndrome, brachydactyly-arterial hypertension syndrome, brachydactyly-preaxial hallux varus syndrome, fibular aplasia-ectrodactyly syndrome, Brachymorphism-onychodysplasia-dysphalangism syndrome, brachytelephalangy-dysmorphism-Kallmann syndrome, femoral-facial syndrome, laurin-Sandrow syndrome, Emery-Nelson syndrome, hand-foot-genital syndrome, IVIC syndrome, Leri pleonosteosis, OSLAM syndrome, pelvis-shoulder dysplasia, phocomelia-ectrodactyly-deafness-sinus arrhythmia syndrome, Poland syndrome, crossed polysyndactyly, postaxial tetramelic oligodactyly, radio-renal syndrome, scalp defects-postaxial polydactyly syndrome, splenogonadal fusion-limb defects-micrognathia syndrome, Karsch-Neugebauer syndrome, symphalangism with multiple anomalies of hands and feet, proximal symphalangism, tarsal-carpal coalition syndrome, extensor tendons of finger anomalies, tetramelic monodactyly, thumb stiffness-brachydactyly-intellectual disability syndrome, tibia, hypoplasia or aplasia of, with polydactyly, Say-field-Coldwell syndrome, triphalangeal thumbs-brachyectrodactyly syndrome, humerus trochlea aplasia, Aphalangy-hemivertebrae-urogenital-intestinal dysgenesis syndrome, camptodactyly syndrome, Guadalajara type 2, Cenani-Lenz syndactyly syndrome, split hand-foot malformation 1 with sensorineural hearing loss, EEM syndrome, ectrodactyly-polydactyly syndrome, lethal faciocardiomelic dysplasia, femur-fibula-ulna complex, Gollop-Wolfgang complex, acromesomelic dysplasia 2B, Fuhrmann syndrome, hallux varus-preaxial polysyndactyly syndrome, Keutel syndrome, absence deformity of leg-cataract syndrome, intellectual disability-spasticity-ectrodactyly syndrome, fibular aplasia, tibial campomelia, and oligosyndactyly syndrome, pelviscapular dysplasia, radioulnar synostosis-developmental delay-hypotonia syndrome, rapadilino syndrome, EEC syndrome, Sugarman brachydactyly, tetraamelia-multiple malformations syndrome, thrombocytopenia-absent radius syndrome, phocomelia, Schinzel type, ulna hypoplasia-intellectual disability syndrome, syndactyly-telecanthus-anogenital and renal malformations syndrome, Mononen-Karnes-Senac syndrome, absent radius-anogenital anomalies syndrome, ulnar hypoplasia-split foot syndrome, aphalangy-syndactyly-microcephaly syndrome, 2q37 microdeletion syndrome, absent tibia-polydactyly-arachnoid cyst syndrome, skeletal dysplasia-epilepsy-short stature syndrome, autosomal recessive amelia, temtamy preaxial brachydactyly syndrome, radio-ulnar synostosis-amegakaryocytic thrombocytopenia syndrome, acropectoral syndrome, familial digital arthropathy-brachydactyly, Duane-radial ray syndrome, ulnar/fibula ray defect-brachydactyly syndrome, intellectual disability-brachydactyly-Pierre Robin syndrome, Al-Gazali syndrome, cocoon syndrome, mammary-digital-nail syndrome, syndactyly-camptodactyly and clinodactyly of fifth fingers-bifid toes syndrome, postaxial polydactyly-anterior pituitary anomalies-facial dysmorphism syndrome, split-foot malformation-mesoaxial polydactyly syndrome, TELO2-related intellectual disability-neurodevelopmental disorder, radial deficiency-tibial hypoplasia syndrome, camptodactyly-taurinuria syndrome, fibular dimelia-diplopodia syndrome, shoulder and thorax deformity-congenital heart disease syndrome, Cornelia de Lange syndrome, familial clubfoot with or without associated lower limb anomalies, heart-hand syndrome, hyperphosphatasia-intellectual disability syndrome, limb transversal defect-cardiac anomaly syndrome, triphalangeal thumb-polysyndactyly syndrome, multiple synostoses syndrome, hereditary thrombocytosis with transverse limb defect, thalidomide embryopathy, tibial aplasia-ectrodactyly syndrome, microcephaly-brachydactyly-kyphoscoliosis syndrome, acrofacial dysostosis, caudal regression-sirenomelia spectrum, Rubinstein-Taybi syndrome, acrocephalosyndactyly, congenital progressive bone marrow failure-B-cell immunodeficiency-skeletal dysplasia syndrome, omphalocele-diaphragmatic hernia-cardiovascular anomalies-radial ray defect syndrome
Subtypes (6): arthrogryposis multiplex congenita, multiple pterygium syndrome, popliteal pterygium syndrome, lethal congenital contracture syndrome, distal arthrogryposis, congenital amyoplasia
Genetics & variants
GWAS landscape
No GWAS associations recorded — common-variant (GWAS) studies don’t cover this disease (typical for Mendelian / rare diseases). See the curated gene cohort and Mendelian overlap below.
Variant details and genetic-evidence tiers
ClinVar germline variants
13 retrieved; paginated sample, class counts are floors:
7 conflicting classifications of pathogenicity, 4 uncertain significance, 2 pathogenic/likely pathogenic
| ClinVar | Variant (HGVS) | Gene | Classification | Review |
|---|---|---|---|---|
| 208584 | NM_000158.4(GBE1):c.691+2T>C | GBE1 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 254646 | NM_052867.4(NALCN):c.1733A>G (p.Tyr578Cys) | NALCN | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 1341390 | NM_000158.4(GBE1):c.1063C>T (p.Arg355Cys) | GBE1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 346793 | NM_000158.4(GBE1):c.721A>G (p.Met241Val) | GBE1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 238813 | NM_001267550.2(TTN):c.59402G>A (p.Gly19801Asp) | LOC126806424 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 197940 | NM_182961.4(SYNE1):c.7976C>A (p.Thr2659Asn) | SYNE1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 178169 | NM_001267550.2(TTN):c.92696T>C (p.Ile30899Thr) | TTN | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 179334 | NM_001267550.2(TTN):c.86729AAG[1] (p.Glu28911del) | TTN | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 202582 | NM_001267550.2(TTN):c.1066G>C (p.Glu356Gln) | TTN | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 4074922 | NM_001457.4(FLNB):c.5252T>C (p.Ile1751Thr) | FLNB | Uncertain significance | criteria provided, single submitter |
| 3377247 | NM_002470.4(MYH3):c.2083C>T (p.Arg695Trp) | MYH3 | Uncertain significance | criteria provided, single submitter |
| 4075151 | NM_182961.4(SYNE1):c.9530A>T (p.Asp3177Val) | SYNE1 | Uncertain significance | criteria provided, single submitter |
| 4072188 | NM_001267550.2(TTN):c.13084G>C (p.Glu4362Gln) | TTN | Uncertain significance | criteria provided, single submitter |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 18 · Orphanet: 44 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
GenCC gene–disease validity (cohort genes)
the Disease column is the GenCC-asserted condition — a cohort gene’s strongest validity may be for a related predisposition syndrome.
| Gene | Classification | Inheritance | Disease | Records |
|---|---|---|---|---|
| ACTC1 | Strong | Autosomal dominant | distal arthrogryposis | 12 |
| MYO9A | Limited | Unknown | arthrogryposis syndrome | 6 |
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|---|---|
| ACTC1 | Orphanet:154 | Familial isolated dilated cardiomyopathy |
| ACTC1 | Orphanet:54260 | Left ventricular noncompaction |
| ACTC1 | Orphanet:99103 | Atrial septal defect, ostium secundum type |
| MYO9A | Orphanet:98914 | Presynaptic congenital myasthenic syndromes |
| TTN | Orphanet:140922 | Titin-related limb-girdle muscular dystrophy R10 |
| TTN | Orphanet:154 | Familial isolated dilated cardiomyopathy |
| TTN | Orphanet:169186 | Autosomal recessive centronuclear myopathy |
| TTN | Orphanet:178464 | Hereditary myopathy with early respiratory failure |
| TTN | Orphanet:289377 | Early-onset myopathy with fatal cardiomyopathy |
| TTN | Orphanet:293888 | Inherited isolated arrhythmogenic cardiomyopathy, dominant-left variant |
| TTN | Orphanet:293899 | Inherited isolated arrhythmogenic ventricular dysplasia, biventricular variant |
| TTN | Orphanet:293910 | Inherited isolated arrhythmogenic cardiomyopathy, dominant-right variant |
| TTN | Orphanet:324604 | Classic multiminicore myopathy |
| TTN | Orphanet:334 | Hereditary atrial fibrillation |
| TTN | Orphanet:466921 | Childhood-onset progressive contractures-limb-girdle weakness-muscle dystrophy syndrome |
| TTN | Orphanet:609 | Tibial muscular dystrophy |
| TTN | Orphanet:707983 | Early-onset autosomal recessive TTN-related distal myopathy |
| SYNE1 | Orphanet:319332 | Autosomal recessive myogenic arthrogryposis multiplex congenita |
| SYNE1 | Orphanet:88644 | Autosomal recessive ataxia, Beauce type |
| SYNE1 | Orphanet:98853 | Autosomal dominant Emery-Dreifuss muscular dystrophy |
| NALCN | Orphanet:1146 | Distal arthrogryposis type 1 |
| NALCN | Orphanet:1147 | Sheldon-Hall syndrome |
| NALCN | Orphanet:2053 | Freeman-Sheldon syndrome |
| NALCN | Orphanet:562528 | Congenital limbs-face contractures-hypotonia-developmental delay syndrome |
| NALCN | Orphanet:700336 | Hypotonia-speech impairment-severe cognitive delay syndrome due to NALCN deficiency |
| FLNB | Orphanet:1190 | Atelosteogenesis type I |
| FLNB | Orphanet:1263 | Boomerang dysplasia |
| FLNB | Orphanet:3275 | Spondylocarpotarsal synostosis |
| FLNB | Orphanet:503 | Larsen syndrome |
| FLNB | Orphanet:56305 | Atelosteogenesis type III |
| GBE1 | Orphanet:206583 | Adult polyglucosan body disease |
| GBE1 | Orphanet:308621 | Glycogen storage disease due to glycogen branching enzyme deficiency, progressive hepatic form |
| GBE1 | Orphanet:308638 | Glycogen storage disease due to glycogen branching enzyme deficiency, non progressive hepatic form |
| GBE1 | Orphanet:308655 | Glycogen storage disease due to glycogen branching enzyme deficiency, fatal perinatal neuromuscular form |
| GBE1 | Orphanet:308670 | Glycogen storage disease due to glycogen branching enzyme deficiency, congenital neuromuscular form |
| GBE1 | Orphanet:308684 | Glycogen storage disease due to glycogen branching enzyme deficiency, childhood combined hepatic and myopathic form |
| GBE1 | Orphanet:308698 | Glycogen storage disease due to glycogen branching enzyme deficiency, childhood neuromuscular form |
| GBE1 | Orphanet:308712 | Glycogen storage disease due to glycogen branching enzyme deficiency, adult neuromuscular form |
| MYH3 | Orphanet:1146 | Distal arthrogryposis type 1 |
| MYH3 | Orphanet:1147 | Sheldon-Hall syndrome |
| MYH3 | Orphanet:2053 | Freeman-Sheldon syndrome |
| MYH3 | Orphanet:2990 | Autosomal recessive multiple pterygium syndrome |
| MYH3 | Orphanet:3275 | Spondylocarpotarsal synostosis |
| MYH3 | Orphanet:65743 | Autosomal dominant multiple pterygium syndrome |
Cohort genes → proteins
8 cohort genes, 8 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|---|
| multi_evidence | 8 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|---|---|---|---|---|
| ACTC1 | HGNC:143 | ENSG00000159251 | P68032 | Actin, alpha cardiac muscle 1 | gencc |
| MYO9A | HGNC:7608 | ENSG00000066933 | B2RTY4 | Unconventional myosin-IXa | gencc |
| TTN | HGNC:12403 | ENSG00000155657 | Q8WZ42 | Titin | clinvar |
| SYNE1 | HGNC:17089 | ENSG00000131018 | Q8NF91 | Nesprin-1 | clinvar |
| NALCN | HGNC:19082 | ENSG00000102452 | Q8IZF0 | Sodium leak channel NALCN | clinvar |
| FLNB | HGNC:3755 | ENSG00000136068 | O75369 | Filamin-B | clinvar |
| GBE1 | HGNC:4180 | ENSG00000114480 | Q04446 | 1,4-alpha-glucan-branching enzyme | clinvar |
| MYH3 | HGNC:7573 | ENSG00000109063 | P11055 | Myosin-3 | clinvar |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|---|---|
| ACTC1 | Actin, alpha cardiac muscle 1 | Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. |
| MYO9A | Unconventional myosin-IXa | Myosins are actin-based motor molecules with ATPase activity. |
| TTN | Titin | Key component in the assembly and functioning of vertebrate striated muscles. |
| SYNE1 | Nesprin-1 | Multi-isomeric modular protein which forms a linking network between organelles and the actin cytoskeleton to maintain the subcellular spatial organization. |
| NALCN | Sodium leak channel NALCN | Voltage-gated ion channel responsible for the resting Na(+) permeability that controls neuronal excitability. |
| FLNB | Filamin-B | Connects cell membrane constituents to the actin cytoskeleton. |
| GBE1 | 1,4-alpha-glucan-branching enzyme | Glycogen-branching enzyme participates in the glycogen biosynthetic process along with glycogenin and glycogen synthase. |
| MYH3 | Myosin-3 | Muscle contraction. |
Protein-family classification
Druggable: 4 · Difficult: 1 · Unknown: 3 · Druggable fraction: 0.5
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|---|---|---|
| Antibody/Immunoglobulin | 2 | 7.3× | 0.143 |
| Ion channel | 1 | 13.9× | 0.174 |
| Kinase | 1 | 3.5× | 0.424 |
| Scaffold/PPI | 1 | 2.2× | 0.474 |
| Other/Unknown | 3 | 0.7× | 0.919 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|---|---|---|---|
| ACTC1 | Other/Unknown | no | Actin, Actin_CS, Actin/actin-like_CS | |
| MYO9A | Other/Unknown | no | IQ_motif_EF-hand-BS, RA_dom, RhoGAP_dom | |
| TTN | Kinase | yes | 2.7.11.1 | Prot_kinase_dom, Ig_sub2, Ig_sub |
| SYNE1 | Other/Unknown | no | Actinin_actin-bd_CS, CH_dom, Spectrin_repeat | |
| NALCN | Ion channel | yes | Ion_trans_dom, Volt_channel_dom_sf, NALCN | |
| FLNB | Antibody/Immunoglobulin | yes | Filamin/ABP280_rpt, Actinin_actin-bd_CS, CH_dom | |
| GBE1 | Antibody/Immunoglobulin | yes | Glyco_hydro_13_N, GH13_cat_dom, A-amylase/branching_C | |
| MYH3 | Scaffold/PPI | no | Myosin_head_motor_dom-like, Myosin_tail, SH3_Myosin |
Expression context
Cohort genes with no expression data: 0.
7 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 0 |
| broad (>20) | 8 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|---|
| calcaneal tendon | 2 |
| biceps brachii | 2 |
| gluteal muscle | 2 |
| heart right ventricle | 1 |
| left ventricle myocardium | 1 |
| myocardium | 1 |
| male germ cell | 1 |
| sperm | 1 |
| skeletal muscle tissue of biceps brachii | 1 |
| cerebellar hemisphere | 1 |
| right hemisphere of cerebellum | 1 |
| Brodmann (1909) area 23 | 1 |
| corpus callosum | 1 |
| middle temporal gyrus | 1 |
| mucosa of transverse colon | 1 |
| tibial nerve | 1 |
| transverse colon | 1 |
| tibialis anterior | 1 |
| left testis | 1 |
| right testis | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|---|---|---|---|
| ACTC1 | 224 | broad | marker | left ventricle myocardium, heart right ventricle, myocardium |
| MYO9A | 280 | ubiquitous | marker | calcaneal tendon, male germ cell, sperm |
| TTN | 223 | broad | marker | biceps brachii, gluteal muscle, skeletal muscle tissue of biceps brachii |
| SYNE1 | 275 | ubiquitous | marker | cerebellar hemisphere, right hemisphere of cerebellum, calcaneal tendon |
| NALCN | 201 | ubiquitous | marker | middle temporal gyrus, Brodmann (1909) area 23, corpus callosum |
| FLNB | 290 | ubiquitous | marker | mucosa of transverse colon, tibial nerve, transverse colon |
| GBE1 | 293 | ubiquitous | marker | gluteal muscle, tibialis anterior, biceps brachii |
| MYH3 | 203 | tissue_specific | yes | left testis, right testis, testis |
Protein interactions among cohort
Intra-cohort edges: 1.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|---|
| TTN | 4,237 |
| GBE1 | 3,402 |
| FLNB | 2,927 |
| SYNE1 | 2,886 |
| MYO9A | 2,434 |
| NALCN | 1,860 |
| MYH3 | 1,795 |
| ACTC1 | 996 |
Intra-cohort edges
| A | B | Sources |
|---|---|---|
| SYNE1 | TTN | string_interaction |
Structural data
PDB: 6 · AlphaFold-only: 2 · No structure: 0
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|---|---|
| TTN | Q8WZ42 | 64 |
| FLNB | O75369 | 23 |
| ACTC1 | P68032 | 16 |
| NALCN | Q8IZF0 | 5 |
| SYNE1 | Q8NF91 | 3 |
| GBE1 | Q04446 | 3 |
AlphaFold-only cohort genes (top 30 by pLDDT)
| Symbol | UniProt | pLDDT |
|---|---|---|
| MYH3 | P11055 | 74.35 |
| MYO9A | B2RTY4 | 58.07 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 25. Enrichment computed across 8 evidence-associated genes (8 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 8 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| Striated Muscle Contraction | 3 | 115.7× | 4e-05 | TTN, ACTC1, MYH3 |
| RHOB GTPase cycle | 2 | 38.6× | 0.014 | ACTC1, MYO9A |
| Glycogen storage disease type IV (GBE1) | 1 | 475.8× | 0.018 | GBE1 |
| Muscle contraction | 2 | 19.3× | 0.024 | ACTC1, MYH3 |
| RHOA GTPase cycle | 2 | 18.7× | 0.024 | ACTC1, MYO9A |
| Regulation of CDH1 Function | 1 | 119.0× | 0.030 | ACTC1 |
| RHO GTPase cycle | 2 | 15.0× | 0.030 | ACTC1, MYO9A |
| Glycogen synthesis | 1 | 102.0× | 0.031 | GBE1 |
| Formation of the dystrophin-glycoprotein complex (DGC) | 1 | 38.6× | 0.053 | ACTC1 |
| Meiosis | 1 | 35.7× | 0.053 | SYNE1 |
| RHOV GTPase cycle | 1 | 35.7× | 0.053 | MYO9A |
| Signaling by Rho GTPases | 2 | 8.6× | 0.053 | ACTC1, MYO9A |
| Signaling by Rho GTPases, Miro GTPases and RHOBTB3 | 2 | 8.4× | 0.053 | ACTC1, MYO9A |
| Reproduction | 1 | 23.8× | 0.074 | SYNE1 |
| Activation of STAT3 by cadherin engagement | 1 | 20.4× | 0.075 | ACTC1 |
| Non-integrin membrane-ECM interactions | 1 | 19.3× | 0.075 | ACTC1 |
| ISG15 antiviral mechanism | 1 | 18.8× | 0.075 | FLNB |
| Meiotic synapsis | 1 | 17.6× | 0.075 | SYNE1 |
| Stimuli-sensing channels | 1 | 17.0× | 0.075 | NALCN |
| Ion channel transport | 1 | 12.0× | 0.101 | NALCN |
| Platelet degranulation | 1 | 11.0× | 0.104 | TTN |
| Extracellular matrix organization | 1 | 7.9× | 0.136 | ACTC1 |
| Signal Transduction | 2 | 2.5× | 0.198 | ACTC1, MYO9A |
| Cell Cycle | 1 | 4.5× | 0.210 | SYNE1 |
| Transport of small molecules | 1 | 3.1× | 0.277 | NALCN |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 8 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| skeletal muscle thin filament assembly | 2 | 702.2× | 2e-04 | TTN, ACTC1 |
| cardiac muscle tissue morphogenesis | 2 | 351.1× | 3e-04 | TTN, ACTC1 |
| cardiac myofibril assembly | 2 | 324.1× | 3e-04 | TTN, ACTC1 |
| muscle filament sliding | 2 | 263.3× | 4e-04 | TTN, MYH3 |
| actin filament-based movement | 2 | 200.6× | 5e-04 | ACTC1, MYH3 |
| skeletal muscle contraction | 2 | 127.7× | 0.001 | TTN, MYH3 |
| cardiac muscle contraction | 2 | 100.3× | 0.001 | TTN, ACTC1 |
| sarcomere organization | 2 | 95.8× | 0.001 | TTN, MYH3 |
| muscle contraction | 2 | 52.0× | 0.004 | TTN, MYH3 |
| actin-myosin filament sliding | 1 | 1053.2× | 0.006 | ACTC1 |
| skeletal muscle myosin thick filament assembly | 1 | 702.2× | 0.007 | TTN |
| sarcomerogenesis | 1 | 702.2× | 0.007 | TTN |
| nuclear matrix anchoring at nuclear membrane | 1 | 702.2× | 0.007 | SYNE1 |
| positive regulation of synaptic transmission, cholinergic | 1 | 421.3× | 0.009 | NALCN |
| cytoplasmic actin-based contraction involved in cell motility | 1 | 421.3× | 0.009 | ACTC1 |
| mesenchyme migration | 1 | 421.3× | 0.009 | ACTC1 |
| regulation of neuron projection arborization | 1 | 351.1× | 0.010 | MYO9A |
| detection of muscle stretch | 1 | 300.9× | 0.011 | TTN |
| cardiac muscle hypertrophy | 1 | 210.7× | 0.014 | TTN |
| cell junction assembly | 1 | 210.7× | 0.014 | MYO9A |
| keratinocyte development | 1 | 191.5× | 0.015 | FLNB |
| obsolete protein kinase A signaling | 1 | 175.5× | 0.016 | TTN |
| regulation of resting membrane potential | 1 | 162.0× | 0.016 | NALCN |
| establishment of epithelial cell apical/basal polarity | 1 | 131.7× | 0.019 | MYO9A |
| mitotic chromosome condensation | 1 | 123.9× | 0.019 | TTN |
| positive regulation of synaptic transmission, GABAergic | 1 | 123.9× | 0.019 | NALCN |
| epithelial cell morphogenesis | 1 | 117.0× | 0.019 | FLNB |
| glycogen biosynthetic process | 1 | 117.0× | 0.019 | GBE1 |
| striated muscle contraction | 1 | 105.3× | 0.019 | TTN |
| muscle cell differentiation | 1 | 105.3× | 0.019 | SYNE1 |
Therapeutics
Drug target analysis
Approved (phase 4): 0 · Phase ≥3: 0 · Phased (≥1): 0 · Undrugged: 8
Druggability breadth: 3 of 8 evidence-associated genes (38%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|---|---|
| ACTC1 | 0 | 0 |
| MYO9A | 0 | 0 |
| TTN | 0 | 0 |
| SYNE1 | 0 | 0 |
| NALCN | 0 | 0 |
| FLNB | 0 | 0 |
| GBE1 | 0 | 0 |
| MYH3 | 0 | 0 |
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 1.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|---|---|
| ACTC1 | 6 | Binding:6 |
| FLNB | 2 | Binding:2 |
| TTN | 1 | Binding:1 |
Cohort enzymes (BRENDA EC)
| Symbol | EC numbers | Names |
|---|---|---|
| TTN | 2.7.11.1 | non-specific serine/threonine protein kinase |
Pharmacogenomics
Cohort genes with a PharmGKB record: 8; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Chemical tractability of cohort targets
0 approved/phased compounds have measured bioactivity against a cohort gene (and aren’t yet in disease-level trials). This is a research / tractability signal, NOT a therapeutic recommendation — a bioactivity row often reflects off-target or screening binding (e.g. promiscuous kinase inhibitors against a cohort kinase), implying no disease mechanism.
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|---|---|---|
| A | Approved (phase 4 drug) | 0 | |
| B | Phased (≥1) drug, not yet approved | 0 | |
| C | Druggable family + PDB, no drug | 4 | TTN, NALCN, FLNB, GBE1 |
| D | Druggable family + AlphaFold only, no drug | 0 | |
| E | Difficult family or no structure, no drug | 4 | ACTC1, MYO9A, SYNE1, MYH3 |
Undrugged target profiles
8 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
| Symbol | ChEMBL assays | Drugged partners (top 3) |
|---|---|---|
| ACTC1 | 6 | — |
| MYO9A | 0 | — |
| TTN | 1 | — |
| SYNE1 | 0 | — |
| NALCN | 0 | — |
| FLNB | 2 | — |
| GBE1 | 0 | — |
| MYH3 | 0 | — |
Clinical trials & evidence
Clinical trials
Clinical trials: 0.