Arthrogryposis
diseaseOn this page
Also known as Arthrogryposes, congenital multiplecongenital multiple Arthrogryposescongenital multiple arthrogryposis
Summary
Arthrogryposis (MONDO:0008779) is a disease (an umbrella term covering 5 Mondo subtypes) caused by variants in MYBPC1 and MYH3, with 9 cohort genes and 9 clinical trials. The dominant Reactome pathway is Striated Muscle Contraction (5 cohort genes).
At a glance
- Causal genes: MYBPC1 (GenCC Strong), MYH3 (GenCC Strong)
- Umbrella term: 5 Mondo subtypes
- Cohort genes: 9
- ClinVar variants: 5
- Clinical trials: 9
Clinical features
No curated clinical features (Orphanet) for this disease.
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | arthrogryposis |
| Mondo ID | MONDO:0008779 |
| EFO | EFO:0003857 |
| MeSH | D001176 |
| NCIT | C84572 |
| UMLS | C0003886 |
| MedGen | 2455 |
| Is cancer (heuristic) | no |
Also known as: Arthrogryposes, congenital multiple · congenital multiple Arthrogryposes · congenital multiple arthrogryposis
Data availability: 5 ClinVar variants · 4 GenCC gene-disease records · 2 cell lines.
Disease family
An umbrella term covering 5 Mondo subtypes.
Classification path: disease › human disease › disease by body system or component › nervous system disorder › movement disorder › arthrogryposis
Related subtypes (53): cerebellar ataxia, chronic tic disorder, choreatic disease, extrapyramidal and movement disease, benign shuddering attacks, transient tic disorder, essential tremor, lingual-facial-buccal dyskinesia, kuru, inherited Creutzfeldt-Jakob disease, Tourette syndrome, clonic hemifacial spasm, Huntington disease, multiple system atrophy, spinal muscular atrophy-progressive myoclonic epilepsy syndrome, benign paroxysmal tonic upgaze of childhood with ataxia, hereditary geniospasm, tremor-nystagmus-duodenal ulcer syndrome, Lafora disease, Unverricht-Lundborg syndrome, neuronal intranuclear inclusion disease, Huntington disease-like 3, brain-lung-thyroid syndrome, myoclonus, familial, proximal myopathy with extrapyramidal signs, progressive myoclonic epilepsy type 7, progressive essential tremor-speech impairment-facial dysmorphism-intellectual disability-abnormal behavior syndrome, progressive non-fluent aphasia, opsoclonus-myoclonus syndrome, isolated facial myokymia, primary orthostatic tremor, familial congenital mirror movements, neuroacanthocytosis, behavioral variant of frontotemporal dementia, frontotemporal dementia with motor neuron disease, hyperekplexia, intellectual disability-hyperkinetic movement-truncal ataxia syndrome, neurodegeneration with brain iron accumulation, Huntington disease-like syndrome due to C9ORF72 expansions, variably protease-sensitive prionopathy, corticobasal syndrome, sensorineural hearing loss-early graying-essential tremor syndrome, progressive supranuclear palsy, Sandifer syndrome, psychogenic movement disorders, epilepsy with myoclonic absences, infantile hypotonia-oculomotor anomalies-hyperkinetic movements-developmental delay syndrome, childhood-onset benign chorea with striatal involvement, childhood-onset motor and cognitive regression syndrome with extrapyramidal movement disorder, PRRT2-associated paroxysmal movement disorder, SLC6A3-related dopamine transporter deficiency syndrome, dyskinesia with orofacial involvement, autosomal dominant, complex movement disorder with or without neurodevelopmental features
Subtypes (5): congenital contractural arachnodactyly, Freeman-Sheldon syndrome, boylan dew greco syndrome, distal arthrogryposis Moore weaver type, massa casaer ceulemans syndrome
Genetics & variants
GWAS landscape
No GWAS associations recorded — common-variant (GWAS) studies don’t cover this disease (typical for Mendelian / rare diseases). See the curated gene cohort and Mendelian overlap below.
Variant details and genetic-evidence tiers
ClinVar germline variants
5 retrieved; paginated sample, class counts are floors:
4 likely pathogenic, 1 pathogenic
| ClinVar | Variant (HGVS) | Gene | Classification | Review |
|---|---|---|---|---|
| 12463 | NM_003289.4(TPM2):c.397C>T (p.Arg133Trp) | TPM2 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 2579718 | NM_005159.5(ACTC1):c.1121G>A (p.Arg374His) | ACTC1 | Likely pathogenic | criteria provided, single submitter |
| 1324108 | NM_198721.4(COL25A1):c.382C>T (p.Arg128Ter) | COL25A1 | Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 3384057 | NM_004826.4(ECEL1):c.1184+1G>T | ECEL1 | Likely pathogenic | criteria provided, single submitter |
| 4820580 | NM_001457.4(FLNB):c.623G>T (p.Trp208Leu) | FLNB | Likely pathogenic | criteria provided, single submitter |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 46 · Orphanet: 34 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
GenCC gene–disease validity (cohort genes)
the Disease column is the GenCC-asserted condition — a cohort gene’s strongest validity may be for a related predisposition syndrome.
| Gene | Classification | Inheritance | Disease | Records |
|---|---|---|---|---|
| MYBPC1 | Strong | Autosomal dominant | arthrogryposis, distal, type 1B | 11 |
| MYH3 | Strong | Autosomal dominant | distal arthrogryposis type 2B1 | 14 |
| SCN1A | Moderate | Autosomal dominant | arthrogryposis | 20 |
| TNNI1 | Moderate | Autosomal dominant | arthrogryposis |
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|---|---|
| SCN1A | Orphanet:1942 | Epilepsy with myoclonic-atonic seizures |
| SCN1A | Orphanet:2382 | Lennox-Gastaut syndrome |
| SCN1A | Orphanet:293181 | Epilepsy of infancy with migrating focal seizures |
| SCN1A | Orphanet:33069 | Dravet syndrome |
| SCN1A | Orphanet:36387 | Genetic epilepsy with febrile seizure plus |
| SCN1A | Orphanet:442835 | Non-specific early-onset epileptic encephalopathy |
| SCN1A | Orphanet:569 | Familial or sporadic hemiplegic migraine |
| MYBPC1 | Orphanet:1146 | Distal arthrogryposis type 1 |
| MYBPC1 | Orphanet:137783 | Lethal congenital contracture syndrome type 3 |
| MYBPC1 | Orphanet:498693 | MYBPC1-related autosomal recessive non-lethal arthrogryposis multiplex congenita syndrome |
| MYH3 | Orphanet:1146 | Distal arthrogryposis type 1 |
| MYH3 | Orphanet:1147 | Sheldon-Hall syndrome |
| MYH3 | Orphanet:2053 | Freeman-Sheldon syndrome |
| MYH3 | Orphanet:2990 | Autosomal recessive multiple pterygium syndrome |
| MYH3 | Orphanet:3275 | Spondylocarpotarsal synostosis |
| MYH3 | Orphanet:65743 | Autosomal dominant multiple pterygium syndrome |
| TPM2 | Orphanet:1146 | Distal arthrogryposis type 1 |
| TPM2 | Orphanet:1147 | Sheldon-Hall syndrome |
| TPM2 | Orphanet:171436 | Typical nemaline myopathy |
| TPM2 | Orphanet:171439 | Childhood-onset nemaline myopathy |
| TPM2 | Orphanet:171881 | Cap myopathy |
| TPM2 | Orphanet:2020 | Congenital fiber-type disproportion myopathy |
| ACTC1 | Orphanet:154 | Familial isolated dilated cardiomyopathy |
| ACTC1 | Orphanet:54260 | Left ventricular noncompaction |
| ACTC1 | Orphanet:99103 | Atrial septal defect, ostium secundum type |
| COL25A1 | Orphanet:1143 | Neurogenic arthrogryposis multiplex congenita |
| COL25A1 | Orphanet:45358 | Congenital fibrosis of extraocular muscles |
| COL25A1 | Orphanet:91411 | Congenital ptosis |
| ECEL1 | Orphanet:329457 | Distal arthrogryposis type 5D |
| FLNB | Orphanet:1190 | Atelosteogenesis type I |
| FLNB | Orphanet:1263 | Boomerang dysplasia |
| FLNB | Orphanet:3275 | Spondylocarpotarsal synostosis |
| FLNB | Orphanet:503 | Larsen syndrome |
| FLNB | Orphanet:56305 | Atelosteogenesis type III |
Cohort genes → proteins
9 cohort genes, 9 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|---|
| multi_evidence | 9 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|---|---|---|---|---|
| SCN1A | HGNC:10585 | ENSG00000144285 | P35498 | Sodium channel protein type 1 subunit alpha | gencc |
| TNNI1 | HGNC:11945 | ENSG00000159173 | P19237 | Troponin I, slow skeletal muscle | gencc |
| MYBPC1 | HGNC:7549 | ENSG00000196091 | Q00872 | Myosin-binding protein C, slow-type | gencc |
| MYH3 | HGNC:7573 | ENSG00000109063 | P11055 | Myosin-3 | gencc |
| TPM2 | HGNC:12011 | ENSG00000198467 | P07951 | Tropomyosin beta chain | clinvar |
| ACTC1 | HGNC:143 | ENSG00000159251 | P68032 | Actin, alpha cardiac muscle 1 | clinvar |
| COL25A1 | HGNC:18603 | ENSG00000188517 | Q9BXS0 | Collagen alpha-1(XXV) chain | clinvar |
| ECEL1 | HGNC:3147 | ENSG00000171551 | O95672 | Endothelin-converting enzyme-like 1 | clinvar |
| FLNB | HGNC:3755 | ENSG00000136068 | O75369 | Filamin-B | clinvar |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|---|---|
| SCN1A | Sodium channel protein type 1 subunit alpha | Pore-forming subunit of Nav1.1, a voltage-gated sodium (Nav) channel that directly mediates the depolarizing phase of action potentials in excitable membranes. |
| TNNI1 | Troponin I, slow skeletal muscle | Troponin I is the inhibitory subunit of troponin, the thin filament regulatory complex which confers calcium-sensitivity to striated muscle actomyosin ATPase activity. |
| MYBPC1 | Myosin-binding protein C, slow-type | Thick filament-associated protein located in the crossbridge region of vertebrate striated muscle a bands. |
| MYH3 | Myosin-3 | Muscle contraction. |
| TPM2 | Tropomyosin beta chain | Binds to actin filaments in muscle and non-muscle cells. |
| ACTC1 | Actin, alpha cardiac muscle 1 | Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. |
| COL25A1 | Collagen alpha-1(XXV) chain | Inhibits fibrillization of amyloid-beta peptide during the elongation phase. |
| ECEL1 | Endothelin-converting enzyme-like 1 | May contribute to the degradation of peptide hormones and be involved in the inactivation of neuronal peptides. |
| FLNB | Filamin-B | Connects cell membrane constituents to the actin cytoskeleton. |
Protein-family classification
Druggable: 4 · Difficult: 1 · Unknown: 4 · Druggable fraction: 0.44
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|---|---|---|
| Antibody/Immunoglobulin | 2 | 6.5× | 0.180 |
| Ion channel | 1 | 12.4× | 0.195 |
| Protease | 1 | 4.1× | 0.368 |
| Scaffold/PPI | 1 | 1.9× | 0.519 |
| Other/Unknown | 4 | 0.8× | 0.847 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|---|---|---|---|
| SCN1A | Ion channel | yes | Na_channel_asu, Ion_trans_dom, Na_channel_a1su | |
| TNNI1 | Other/Unknown | no | Troponin, Troponin_sf, Troponin_I | |
| MYBPC1 | Antibody/Immunoglobulin | yes | Ig_sub2, Ig_sub, FN3_dom | |
| MYH3 | Scaffold/PPI | no | Myosin_head_motor_dom-like, Myosin_tail, SH3_Myosin | |
| TPM2 | Other/Unknown | no | Tropomyosin | |
| ACTC1 | Other/Unknown | no | Actin, Actin_CS, Actin/actin-like_CS | |
| COL25A1 | Other/Unknown | no | Collagen, Collagen_Structural_Proteins | |
| ECEL1 | Protease | yes | Peptidase_M13, Peptidase_M13_N, Peptidase_M13_C | |
| FLNB | Antibody/Immunoglobulin | yes | Filamin/ABP280_rpt, Actinin_actin-bd_CS, CH_dom |
Expression context
Cohort genes with no expression data: 0.
8 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 0 |
| broad (>20) | 9 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|---|
| skeletal muscle tissue of biceps brachii | 2 |
| skeletal muscle tissue of rectus abdominis | 2 |
| left testis | 2 |
| right testis | 2 |
| Brodmann (1909) area 23 | 1 |
| lateral nuclear group of thalamus | 1 |
| primary visual cortex | 1 |
| diaphragm | 1 |
| biceps brachii | 1 |
| testis | 1 |
| blood vessel layer | 1 |
| popliteal artery | 1 |
| saphenous vein | 1 |
| heart right ventricle | 1 |
| left ventricle myocardium | 1 |
| myocardium | 1 |
| sperm | 1 |
| adenohypophysis | 1 |
| left ovary | 1 |
| right ovary | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|---|---|---|---|
| SCN1A | 154 | tissue_specific | marker | Brodmann (1909) area 23, lateral nuclear group of thalamus, primary visual cortex |
| TNNI1 | 183 | broad | marker | skeletal muscle tissue of rectus abdominis, skeletal muscle tissue of biceps brachii, diaphragm |
| MYBPC1 | 225 | broad | marker | biceps brachii, skeletal muscle tissue of rectus abdominis, skeletal muscle tissue of biceps brachii |
| MYH3 | 203 | tissue_specific | yes | left testis, right testis, testis |
| TPM2 | 283 | ubiquitous | marker | saphenous vein, popliteal artery, blood vessel layer |
| ACTC1 | 224 | broad | marker | left ventricle myocardium, heart right ventricle, myocardium |
| COL25A1 | 163 | broad | marker | sperm, left testis, right testis |
| ECEL1 | 152 | broad | marker | left ovary, right ovary, adenohypophysis |
| FLNB | 290 | ubiquitous | marker | mucosa of transverse colon, tibial nerve, transverse colon |
Protein interactions among cohort
Intra-cohort edges: 4.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|---|
| FLNB | 2,927 |
| SCN1A | 2,287 |
| MYBPC1 | 1,816 |
| MYH3 | 1,795 |
| TNNI1 | 1,367 |
| ECEL1 | 1,194 |
| COL25A1 | 1,104 |
| ACTC1 | 996 |
| TPM2 | 357 |
Intra-cohort edges
| A | B | Sources |
|---|---|---|
| MYBPC1 | MYH3 | string_interaction |
| MYH3 | TNNI1 | biogrid_interaction |
| MYH3 | TPM2 | biogrid_interaction |
| TNNI1 | TPM2 | biogrid_interaction |
Structural data
PDB: 4 · AlphaFold-only: 5 · No structure: 0
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|---|---|
| FLNB | O75369 | 23 |
| ACTC1 | P68032 | 16 |
| MYBPC1 | Q00872 | 8 |
| SCN1A | P35498 | 1 |
AlphaFold-only cohort genes (top 30 by pLDDT)
| Symbol | UniProt | pLDDT |
|---|---|---|
| TPM2 | P07951 | 91.51 |
| ECEL1 | O95672 | 88.62 |
| TNNI1 | P19237 | 78.44 |
| MYH3 | P11055 | 74.35 |
| COL25A1 | Q9BXS0 | 57.23 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 25. Enrichment computed across 9 evidence-associated genes (8 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 8 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| Striated Muscle Contraction | 5 | 192.9× | 4e-10 | TNNI1, TPM2, ACTC1, MYBPC1, MYH3 |
| Muscle contraction | 4 | 38.6× | 2e-05 | SCN1A, ACTC1, MYBPC1, MYH3 |
| Regulation of CDH1 Function | 1 | 119.0× | 0.070 | ACTC1 |
| Interaction between L1 and Ankyrins | 1 | 46.0× | 0.093 | SCN1A |
| Phase 0 - rapid depolarisation | 1 | 43.3× | 0.093 | SCN1A |
| Formation of the dystrophin-glycoprotein complex (DGC) | 1 | 38.6× | 0.093 | ACTC1 |
| Smooth Muscle Contraction | 1 | 33.2× | 0.093 | TPM2 |
| Collagen chain trimerization | 1 | 32.4× | 0.093 | COL25A1 |
| Collagen degradation | 1 | 22.0× | 0.093 | COL25A1 |
| Collagen biosynthesis and modifying enzymes | 1 | 21.3× | 0.093 | COL25A1 |
| Activation of STAT3 by cadherin engagement | 1 | 20.4× | 0.093 | ACTC1 |
| Non-integrin membrane-ECM interactions | 1 | 19.3× | 0.093 | ACTC1 |
| RHOB GTPase cycle | 1 | 19.3× | 0.093 | ACTC1 |
| ISG15 antiviral mechanism | 1 | 18.8× | 0.093 | FLNB |
| L1CAM interactions | 1 | 15.0× | 0.108 | SCN1A |
| Cardiac conduction | 1 | 13.6× | 0.111 | SCN1A |
| RHOA GTPase cycle | 1 | 9.3× | 0.150 | ACTC1 |
| Extracellular matrix organization | 1 | 7.9× | 0.165 | ACTC1 |
| RHO GTPase cycle | 1 | 7.5× | 0.165 | ACTC1 |
| Axon guidance | 1 | 5.6× | 0.205 | SCN1A |
| Nervous system development | 1 | 5.4× | 0.205 | SCN1A |
| Signaling by Rho GTPases | 1 | 4.3× | 0.234 | ACTC1 |
| Signaling by Rho GTPases, Miro GTPases and RHOBTB3 | 1 | 4.2× | 0.234 | ACTC1 |
| Developmental Biology | 1 | 1.8× | 0.455 | SCN1A |
| Signal Transduction | 1 | 1.3× | 0.563 | ACTC1 |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 9 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| actin filament-based movement | 2 | 178.3× | 0.003 | ACTC1, MYH3 |
| skeletal muscle contraction | 2 | 113.5× | 0.003 | TNNI1, MYH3 |
| cardiac muscle contraction | 2 | 89.2× | 0.003 | TNNI1, ACTC1 |
| sarcomere organization | 2 | 85.1× | 0.003 | MYBPC1, MYH3 |
| actin-myosin filament sliding | 1 | 936.2× | 0.008 | ACTC1 |
| regulation of ATP-dependent activity | 1 | 936.2× | 0.008 | TPM2 |
| muscle contraction | 2 | 46.2× | 0.008 | TPM2, MYH3 |
| cytoplasmic actin-based contraction involved in cell motility | 1 | 374.5× | 0.013 | ACTC1 |
| mesenchyme migration | 1 | 374.5× | 0.013 | ACTC1 |
| actin filament organization | 2 | 26.4× | 0.013 | TPM2, ACTC1 |
| skeletal muscle thin filament assembly | 1 | 312.1× | 0.015 | ACTC1 |
| transition between fast and slow fiber | 1 | 267.5× | 0.016 | TNNI1 |
| regulation of striated muscle contraction | 1 | 234.1× | 0.016 | TNNI1 |
| axonogenesis involved in innervation | 1 | 187.2× | 0.018 | COL25A1 |
| membrane depolarization during action potential | 1 | 187.2× | 0.018 | SCN1A |
| keratinocyte development | 1 | 170.2× | 0.018 | FLNB |
| neuronal action potential propagation | 1 | 156.0× | 0.018 | SCN1A |
| cardiac muscle tissue morphogenesis | 1 | 156.0× | 0.018 | ACTC1 |
| cardiac myofibril assembly | 1 | 144.0× | 0.018 | ACTC1 |
| detection of mechanical stimulus involved in sensory perception of pain | 1 | 124.8× | 0.019 | SCN1A |
| muscle filament sliding | 1 | 117.0× | 0.019 | MYH3 |
| neuromuscular process controlling posture | 1 | 117.0× | 0.019 | SCN1A |
| respiratory system process | 1 | 104.0× | 0.019 | ECEL1 |
| epithelial cell morphogenesis | 1 | 104.0× | 0.019 | FLNB |
| nerve development | 1 | 104.0× | 0.019 | SCN1A |
| heart contraction | 1 | 85.1× | 0.022 | ACTC1 |
| ventricular cardiac muscle tissue morphogenesis | 1 | 78.0× | 0.023 | TNNI1 |
| cardiac muscle cell action potential involved in contraction | 1 | 78.0× | 0.023 | SCN1A |
| actomyosin structure organization | 1 | 62.4× | 0.027 | ACTC1 |
| adult walking behavior | 1 | 55.1× | 0.029 | SCN1A |
Therapeutics
Drug target analysis
Approved (phase 4): 1 · Phase ≥3: 1 · Phased (≥1): 1 · Undrugged: 8
Druggability breadth: 3 of 9 evidence-associated genes (33%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Genes with an approved drug
The molecule shown is one approved compound that hits the gene — not necessarily a drug of choice or one indicated for this disease.
| Symbol | Example approved molecule |
|---|---|
| SCN1A | MEXILETINE HYDROCHLORIDE |
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|---|---|
| SCN1A | 94 | 4 |
| TNNI1 | 0 | 0 |
| MYBPC1 | 0 | 0 |
| MYH3 | 0 | 0 |
| TPM2 | 0 | 0 |
| ACTC1 | 0 | 0 |
| COL25A1 | 0 | 0 |
| ECEL1 | 0 | 0 |
| FLNB | 0 | 0 |
Drugs targeting cohort genes (top 30)
| Molecule | Max phase | Targets in cohort |
|---|---|---|
| MEXILETINE HYDROCHLORIDE | 4 | SCN1A |
| BEPRIDIL | 4 | SCN1A |
| DIBUCAINE | 4 | SCN1A |
| ARTICAINE | 4 | SCN1A |
| BUPIVACAINE | 4 | SCN1A |
| IMIPRAMINE | 4 | SCN1A |
| DROPERIDOL | 4 | SCN1A |
| DICYCLOMINE | 4 | SCN1A |
| TETRABENAZINE | 4 | SCN1A |
| PHENIRAMINE | 4 | SCN1A |
| PRILOCAINE | 4 | SCN1A |
| PROPOXYCAINE | 4 | SCN1A |
| PROPARACAINE | 4 | SCN1A |
| HEXYLCAINE | 4 | SCN1A |
| PRAMOXINE | 4 | SCN1A |
| BENOXINATE | 4 | SCN1A |
| QUINIDINE | 4 | SCN1A |
| FELODIPINE | 4 | SCN1A |
| PHENYTOIN | 4 | SCN1A |
| QUININE | 4 | SCN1A |
| NISOLDIPINE | 4 | SCN1A |
| NIFEDIPINE | 4 | SCN1A |
| PRAZOSIN | 4 | SCN1A |
| DILTIAZEM | 4 | SCN1A |
| PRENYLAMINE | 4 | SCN1A |
| COCAINE | 4 | SCN1A |
| TRIFLUOPERAZINE | 4 | SCN1A |
| CINNARIZINE | 4 | SCN1A |
| THIORIDAZINE | 4 | SCN1A |
| ETIDOCAINE | 4 | SCN1A |
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 0.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|---|---|
| SCN1A | 149 | Binding:115, Functional:18, ADMET:14, Toxicity:2 |
| ACTC1 | 6 | Binding:6 |
| FLNB | 2 | Binding:2 |
Cohort genes with high screening signal
≥100 ChEMBL assays — a studied-ness signal; see Therapeutics for approved-drug status.
| Symbol | ChEMBL assays |
|---|---|
| SCN1A | 149 |
Pharmacogenomics
Cohort genes with a PharmGKB record: 9; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Chemical tractability of cohort targets
30 approved/phased compounds have measured bioactivity against a cohort gene (and aren’t yet in disease-level trials). This is a research / tractability signal, NOT a therapeutic recommendation — a bioactivity row often reflects off-target or screening binding (e.g. promiscuous kinase inhibitors against a cohort kinase), implying no disease mechanism.
| Compound | Max phase | Cohort target (bioactivity) |
|---|---|---|
| MEXILETINE HYDROCHLORIDE | 4 | SCN1A |
| BEPRIDIL | 4 | SCN1A |
| DIBUCAINE | 4 | SCN1A |
| ARTICAINE | 4 | SCN1A |
| BUPIVACAINE | 4 | SCN1A |
| IMIPRAMINE | 4 | SCN1A |
| DROPERIDOL | 4 | SCN1A |
| DICYCLOMINE | 4 | SCN1A |
| TETRABENAZINE | 4 | SCN1A |
| PHENIRAMINE | 4 | SCN1A |
| PRILOCAINE | 4 | SCN1A |
| PROPOXYCAINE | 4 | SCN1A |
| PROPARACAINE | 4 | SCN1A |
| HEXYLCAINE | 4 | SCN1A |
| PRAMOXINE | 4 | SCN1A |
| BENOXINATE | 4 | SCN1A |
| QUINIDINE | 4 | SCN1A |
| FELODIPINE | 4 | SCN1A |
| PHENYTOIN | 4 | SCN1A |
| QUININE | 4 | SCN1A |
| NISOLDIPINE | 4 | SCN1A |
| NIFEDIPINE | 4 | SCN1A |
| PRAZOSIN | 4 | SCN1A |
| DILTIAZEM | 4 | SCN1A |
| PRENYLAMINE | 4 | SCN1A |
| COCAINE | 4 | SCN1A |
| TRIFLUOPERAZINE | 4 | SCN1A |
| CINNARIZINE | 4 | SCN1A |
| THIORIDAZINE | 4 | SCN1A |
| ETIDOCAINE | 4 | SCN1A |
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|---|---|---|
| A | Approved (phase 4 drug) | 1 | SCN1A |
| B | Phased (≥1) drug, not yet approved | 0 | |
| C | Druggable family + PDB, no drug | 2 | MYBPC1, FLNB |
| D | Druggable family + AlphaFold only, no drug | 1 | ECEL1 |
| E | Difficult family or no structure, no drug | 5 | TNNI1, MYH3, TPM2, ACTC1, COL25A1 |
Undrugged target profiles
8 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
| Symbol | ChEMBL assays | Drugged partners (top 3) |
|---|---|---|
| TNNI1 | 0 | — |
| MYBPC1 | 0 | — |
| MYH3 | 0 | — |
| TPM2 | 0 | — |
| ACTC1 | 6 | — |
| COL25A1 | 0 | — |
| ECEL1 | 0 | — |
| FLNB | 2 | — |
Clinical trials & evidence
Clinical trials
Clinical trials: 9.
Phase distribution (across all retrieved trials)
| Phase | Trials |
|---|---|
| Not specified | 8 |
| PHASE2 | 1 |
Top trials by phase / activity
| NCT | Phase | Status | Title |
|---|---|---|---|
| NCT01028833 | PHASE2 | COMPLETED | Effects of Power Mobility on Young Children With Severe Motor Impairments |
| NCT04798378 | Not specified | ACTIVE_NOT_RECRUITING | NuroSleeve Powered Brace & Stimulation System to Restore Arm Function |
| NCT06192134 | Not specified | NOT_YET_RECRUITING | Continuous Passive Motion Device for Children With Arthrogryposis |
| NCT07429188 | Not specified | RECRUITING | Impact Study on Users of Upper Limb Assistive Devices |
| NCT01144741 | Not specified | TERMINATED | Survey Study and Records Review of Treatment Outcomes in Freeman-Sheldon Syndrome |
| NCT01306994 | Not specified | WITHDRAWN | Study of Resting and Exercising Body Functioning in Freeman-Sheldon Syndrome and Related Conditions |
| NCT01307475 | Not specified | TERMINATED | Study of Quality of Life in Freeman-Sheldon Syndrome and Related Conditions |
| NCT02218593 | Not specified | COMPLETED | WREX Outcome Study |
| NCT04789746 | Not specified | UNKNOWN | Ready, Set, Go! A Physical Fitness Intervention for Children With Mobility Challenges |