Summary
Asthma (MONDO:0004979) is a disease (an umbrella term covering 8 Mondo subtypes) with 75 cohort genes (3,219 GWAS associations across 280 studies) and 3,826 clinical trials. The dominant Reactome pathway is TNFs bind their physiological receptors (8 cohort genes). Top therapeutic interventions include montelukast, albuterol, and salmeterol.
At a glance
- Umbrella term: 8 Mondo subtypes
- Cohort genes: 75
- GWAS associations: 3,219
- ClinVar variants: 12
- Clinical trials: 3,826
Clinical features
No curated clinical features (Orphanet) for this disease.
Identifiers
Disease identifiers
| Field | Value |
|---|
| Canonical name | asthma |
| Mondo ID | MONDO:0004979 |
| MeSH | D001249 |
| DOID | DOID:2841 |
| ICD-10-CM | J45 |
| ICD-11 | 1656445230 |
| NCIT | C28397 |
| SNOMED CT | 31387002 |
| UMLS | C0004096 |
| MedGen | 2109 |
| Is cancer (heuristic) | no |
Also known as: chronic obstructive asthma · chronic obstructive asthma with acute exacerbation · chronic obstructive asthma with status asthmaticus · exercise induced asthma · exercise-induced asthma
Data availability: 12 ClinVar variants · 3,219 GWAS associations (280 studies) · 1 HPO phenotype · 1 cell line.
Disease family
An umbrella term covering 8 Mondo subtypes.
Classification path: disease › human disease › disease by body system or component › respiratory system disorder › lower respiratory tract disorder › bronchial disorder › asthma
Related subtypes (5): bronchial neoplasm, bronchitis, bronchiectasis, non-syndromic bridging bronchus, non-syndromic congenital bronchial atresia
Subtypes (8): cough variant asthma, intrinsic asthma, status asthmaticus, allergic asthma, childhood onset asthma, occupational asthma, chronic asthma, acute asthma
Genetics & variants
GWAS landscape
3,219 GWAS associations across 280 studies. Top hits map to 16 distinct genes (as reported by GWAS).
Top associations by p-value
| rsID | p-value | Gene | Risk allele | Odds ratio |
|---|
| rs28383454 | 2e-116 | HLA-DQA1 | T | 1.18 |
| rs7749543 | 8e-115 | HLA-DQB2 - HLA-DOB | ? | |
| rs9273123 | 4e-105 | HLA-DQA1 | A | 1.19 |
| rs9276643 | 7e-105 | HLA-DQB2 - HLA-DOB | ? | |
| rs28798705 | 6e-104 | HLA-DQA1 - HLA-DQB1 | A | 1.18 |
| rs72823641 | 1e-78 | IL18R1, IL1RL1 | T | 1.16 |
| rs7936312 | 1e-77 | EMSY - LINC02757 | T | 1.11 |
| rs992969 | 3e-72 | GTF3AP1 - IL33 | A | 1.15 |
| rs60227565 | 5e-71 | CFAP144P2 - IL1RL1 | G | 1.2 |
| rs7848215 | 9e-71 | GTF3AP1 - IL33 | T | 1.15 |
| rs28407950 | 7e-70 | HLA-DQA1 - HLA-DQB1 | C | 1.12 |
| rs4795399 | 7e-65 | GSDMB | T | 2.29 |
| rs28690449 | 2e-64 | TLR10 - TLR1 | C | 1.12 |
| rs11655198 | 1e-63 | ZPBP2 | ? | 1.18 |
| rs1008723 | 2e-62 | GSDMB | G | 1.11 |
| rs11236797 | 6e-62 | EMSY - LINC02757 | A | 1.12 |
| rs1438673 | 7e-62 | WDR36 - RPS3AP21 | C | 1.09 |
| rs2428494 | 2e-60 | HLA-B | A | 1.12 |
| rs34290285 | 6e-58 | D2HGDH | G | 1.11 |
| rs9901146 | 4e-57 | ZPBP2 - GSDMB | G | |
| rs12470864 | 2e-56 | CFAP144P2 - IL1RL1 | A | 1.12 |
| rs1861245 | 1e-52 | IL18R1, IL1RL1 | C | 1.12 |
| rs1837253 | 1e-51 | BCLAF1P1 - TSLP | C | 1.11 |
| rs1444782 | 1e-48 | LINC02676 - LINC00709 | G | 1.1 |
| rs1775554 | 2e-46 | LINC02676 - LINC00709 | A | 1.1 |
| rs72743461 | 3e-46 | SMAD3 | A | 1.12 |
| rs12935657 | 6e-45 | CLEC16A | G | 1.09 |
| rs6881270 | 3e-44 | IL7R | C | 1.09 |
| rs62557312 | 3e-43 | RANBP6 - GTF3AP1 | C | 1.13 |
| rs55646091 | 9e-42 | EMSY - LINC02757 | A | 1.24 |
Top studies (by case count)
| Study | Lead author | Year | Cases | Controls | Title |
|---|
| GCST007798 | Ferreira MAR | 2019 | 40,544 | 300,671 | Genetic Architectures of Childhood- and Adult-Onset Asthma Are Partly Distinct. |
| GCST003987 | Pickrell JK | 2016 | 28,399 | 128,843 | Detection and interpretation of shared genetic influences on 42 human traits. |
| GCST007563 | Zhu Z | 2018 | 25,685 | 76,768 | A genome-wide cross-trait analysis from UK Biobank highlights the shared genetic architecture of asthma and allergic diseases. |
| GCST005212 | Demenais F | 2017 | 19,954 | 107,715 | Multiancestry association study identifies new asthma risk loci that colocalize with immune-cell enhancer marks. |
| GCST006862 | Demenais F | 2017 | 19,954 | 107,715 | Multiancestry association study identifies new asthma risk loci that colocalize with immune-cell enhancer marks. |
| GCST007596 | Dahlin A | 2018 | 16,274 | 38,269 | Large-scale, multi-ethnic genome-wide association study identifies novel loci contributing to asthma susceptibility in adults. |
| GCST007562 | Zhu Z | 2018 | 14,085 | 76,768 | A genome-wide cross-trait analysis from UK Biobank highlights the shared genetic architecture of asthma and allergic diseases. |
| GCST007564 | Zhu Z | 2018 | 14,085 | 76,768 | A genome-wide cross-trait analysis from UK Biobank highlights the shared genetic architecture of asthma and allergic diseases. |
| GCST001226 | Ferreira MA | 2011 | 12,475 | 19,967 | Identification of IL6R and chromosome 11q13.5 as risk loci for asthma. |
| GCST000804 | Moffatt MF | 2010 | 10,365 | 16,110 | A large-scale, consortium-based genomewide association study of asthma. |
Variant details and genetic-evidence tiers
Tier distribution (top 50 variants)
| Tier | Variants |
|---|
| Tier 1: coding | 1 |
| Tier 2: splice/UTR | 2 |
| Tier 3: regulatory | 4 |
| Tier 4: intronic/intergenic | 43 |
MAF distribution
| Bucket | Variants |
|---|
| common (>=0.05) | 47 |
| low_freq (0.01-0.05) | 1 |
| rare (<0.01) | 0 |
| unknown | 2 |
Functional consequences
| Consequence | Count |
|---|
| intron_variant | 23 |
| intergenic_variant | 20 |
| regulatory_region_variant | 4 |
| 3_prime_UTR_variant | 2 |
| missense_variant | 1 |
Top variants
| rsID | Chr | Pos | Alleles | MAF | Consequence | Gene | p-value | Tier |
|---|
| rs28383454 | 6 | 32641593 | G>C,T | 0.05 | intron_variant | HLA-DQA1 | 2e-116 | Tier 4: intronic/intergenic |
| rs7749543 | 6 | 32783639 | G>A,T | 0.05 | intergenic_variant | HLA-DQB2 - HLA-DOB | 8e-115 | Tier 4: intronic/intergenic |
| rs9273123 | 6 | 32644956 | G>A | 0.05 | intergenic_variant | HLA-DQA1 | 4e-105 | Tier 4: intronic/intergenic |
| rs9276643 | 6 | 32777057 | G>A,C,T | 0.05 | intergenic_variant | HLA-DQB2 - HLA-DOB | 7e-105 | Tier 4: intronic/intergenic |
| rs28798705 | 6 | 32650032 | A>G,T | 0.05 | intergenic_variant | HLA-DQA1 - HLA-DQB1 | 6e-104 | Tier 4: intronic/intergenic |
| rs72823641 | 2 | 102319699 | T>A,C | 0.137 | intron_variant | IL18R1, IL1RL1 | 1e-78 | Tier 4: intronic/intergenic |
| rs7936312 | 11 | 76582682 | G>C,T | 0.477 | intergenic_variant | EMSY - LINC02757 | 1e-77 | Tier 4: intronic/intergenic |
| rs992969 | 9 | 6209697 | A>C,G,T | 0.05 | intergenic_variant | GTF3AP1 - IL33 | 3e-72 | Tier 4: intronic/intergenic |
| rs60227565 | 2 | 102275879 | G>A,C,T | 0.05 | intron_variant | CFAP144P2 - IL1RL1 | 5e-71 | Tier 4: intronic/intergenic |
| rs7848215 | 9 | 6213468 | C>A,G,T | 0.05 | intergenic_variant | GTF3AP1 - IL33 | 9e-71 | Tier 4: intronic/intergenic |
| rs28407950 | 6 | 32658571 | C>G,T | 0.244 | intergenic_variant | HLA-DQA1 - HLA-DQB1 | 7e-70 | Tier 4: intronic/intergenic |
| rs4795399 | 17 | 39905186 | T>A,C | 0.471 | intron_variant | GSDMB | 7e-65 | Tier 4: intronic/intergenic |
| rs28690449 | 4 | 38787511 | C>A,G,T | 0.201 | intergenic_variant | TLR10 - TLR1 | 2e-64 | Tier 4: intronic/intergenic |
| rs11655198 | 17 | 39869916 | C>T | 0.05 | intron_variant | ZPBP2 | 1e-63 | Tier 4: intronic/intergenic |
| rs1008723 | 17 | 39910014 | G>C,T | 0.489 | intron_variant | GSDMB | 2e-62 | Tier 4: intronic/intergenic |
| rs11236797 | 11 | 76588605 | C>A | 0.05 | regulatory_region_variant | EMSY - LINC02757 | 6e-62 | Tier 3: regulatory |
| rs1438673 | 5 | 111131801 | C>A,G,T | 0.483 | intergenic_variant | WDR36 - RPS3AP21 | 7e-62 | Tier 4: intronic/intergenic |
| rs2428494 | 6 | 31354420 | T>A,C,G | 0.05 | intron_variant | HLA-B | 2e-60 | Tier 4: intronic/intergenic |
| rs34290285 | 2 | 241759225 | G>A | 0.255 | intron_variant | D2HGDH | 6e-58 | Tier 4: intronic/intergenic |
| rs9901146 | 17 | 39887090 | G>A | 0.49 | intergenic_variant | ZPBP2 - GSDMB | 4e-57 | Tier 4: intronic/intergenic |
| rs12470864 | 2 | 102309902 | G>A,T | 0.05 | intergenic_variant | CFAP144P2 - IL1RL1 | 2e-56 | Tier 4: intronic/intergenic |
| rs1861245 | 2 | 102350446 | C>T | 0.05 | intron_variant | IL18R1, IL1RL1 | 1e-52 | Tier 4: intronic/intergenic |
| rs1837253 | 5 | 111066174 | T>C | 0.261 | intron_variant | BCLAF1P1 - TSLP | 1e-51 | Tier 4: intronic/intergenic |
| rs1444782 | 10 | 9016708 | G>A | 0.424 | intron_variant | LINC02676 - LINC00709 | 1e-48 | Tier 4: intronic/intergenic |
| rs1775554 | 10 | 9012377 | A>C,G,T | 0.05 | intron_variant | LINC02676 - LINC00709 | 2e-46 | Tier 4: intronic/intergenic |
| rs72743461 | 15 | 67149412 | C>A,T | 0.05 | intron_variant | SMAD3 | 3e-46 | Tier 4: intronic/intergenic |
| rs12935657 | 16 | 11125184 | G>A,T | 0.244 | intron_variant | CLEC16A | 6e-45 | Tier 4: intronic/intergenic |
| rs6881270 | 5 | 35878993 | C>T | 0.275 | 3_prime_UTR_variant | IL7R | 3e-44 | Tier 2: splice/UTR |
| rs62557312 | 9 | 6047765 | C>G,T | 0.05 | intron_variant | RANBP6 - GTF3AP1 | 3e-43 | Tier 4: intronic/intergenic |
| rs55646091 | 11 | 76588387 | G>A | 0.05 | regulatory_region_variant | EMSY - LINC02757 | 9e-42 | Tier 3: regulatory |
ClinVar germline variants
12 retrieved; paginated sample, class counts are floors:
6 uncertain significance, 2 likely pathogenic, 2 pathogenic, 1 benign, 1 risk factor
| ClinVar | Variant (HGVS) | Gene | Classification | Review |
|---|
| 267847 | 46;XY;t(9;11)(q34;p11.2)dn | | Pathogenic | criteria provided, single submitter |
| 48648 | NM_032415.7(CARD11):c.367G>A (p.Gly123Ser) | CARD11 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 267807 | 46;XY;t(7;9)(q21;p23)dn | | Likely pathogenic | criteria provided, single submitter |
| 267892 | 46;XX;t(4;14)(p15.2;q13)dn | | Likely pathogenic | criteria provided, single submitter |
| 638564 | NM_004117.4(FKBP5):c.106-2332A>C | FKBP5 | risk factor | no assertion criteria provided |
| 267810 | 46;XX;t(4;15)(q31.3;q15) | | Uncertain significance | criteria provided, single submitter |
| 267820 | 46;XY;t(16;20)(q11.2;q13.2)dn | | Uncertain significance | criteria provided, single submitter |
| 267862 | 46;XY;t(1;3)(p22;q21)dn | | Uncertain significance | criteria provided, single submitter |
| 267914 | 46;XY;t(9;14)(p21;q12)dn | | Uncertain significance | criteria provided, single submitter |
| 267924 | 46;XY;t(16;20)(q23.1;p11.22) | | Uncertain significance | criteria provided, single submitter |
| 267942 | 46;XY;t(1;14)(q42;q13) | | Uncertain significance | criteria provided, single submitter |
| 12712 | NM_001060.6(TBXA2R):c.179G>T (p.Arg60Leu) | TBXA2R | Benign | criteria provided, single submitter |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 0 · Orphanet: 55 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 1
Dual-evidence genes (GWAS + Mendelian — highest-confidence targets)
| Gene | HGNC | Evidence routes |
|---|
| CARD11 | CARD11 | GWAS, Orphanet |
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|
| CARD11 | Orphanet:300324 | Persistent polyclonal B-cell lymphocytosis |
| CARD11 | Orphanet:357237 | Combined immunodeficiency due to CARD11 deficiency |
| CARD11 | Orphanet:464336 | BENTA disease |
| CARD11 | Orphanet:619972 | CADINS disease |
| BCL6 | Orphanet:480541 | High grade B-cell lymphoma with MYC and/ or BCL2 and/or BCL6 rearrangement |
| BCL6 | Orphanet:545 | Follicular lymphoma |
| BCL6 | Orphanet:98838 | Primary mediastinal large B-cell lymphoma |
| BCL6 | Orphanet:98839 | Intravascular large B-cell lymphoma |
| RHO | Orphanet:215 | Congenital stationary night blindness |
| RHO | Orphanet:52427 | Retinitis punctata albescens |
| RHO | Orphanet:791 | Retinitis pigmentosa |
| BCR | Orphanet:261330 | Distal 22q11.2 microdeletion syndrome |
| BCR | Orphanet:521 | Chronic myeloid leukemia |
| BCR | Orphanet:585909 | B-lymphoblastic leukemia/lymphoma with t(9;22)(q34.1;q11.2) |
| BCR | Orphanet:99861 | Precursor T-cell acute lymphoblastic leukemia |
| RORA | Orphanet:528084 | Non-specific syndromic intellectual disability |
| RORC | Orphanet:477857 | Mendelian susceptibility to mycobacterial diseases due to complete RORgamma receptor deficiency |
| RPL5 | Orphanet:124 | Diamond-Blackfan anemia |
| CFB | Orphanet:544472 | Atypical hemolytic uremic syndrome with complement gene abnormality |
| RPS26 | Orphanet:124 | Diamond-Blackfan anemia |
| RUNX1 | Orphanet:102724 | Acute myeloid leukemia with t(8;21)(q22;q22) translocation |
| RUNX1 | Orphanet:521 | Chronic myeloid leukemia |
| RUNX1 | Orphanet:71290 | Familial platelet disorder with associated myeloid malignancy |
| RUNX1 | Orphanet:98850 | Aggressive systemic mastocytosis |
| RYR1 | Orphanet:169186 | Autosomal recessive centronuclear myopathy |
| RYR1 | Orphanet:169189 | Autosomal dominant centronuclear myopathy |
| RYR1 | Orphanet:178145 | Moderate multiminicore disease with hand involvement |
| RYR1 | Orphanet:324581 | Benign Samaritan congenital myopathy |
| RYR1 | Orphanet:33108 | Lethal multiple pterygium syndrome |
| RYR1 | Orphanet:423 | Malignant hyperthermia of anesthesia |
| RYR1 | Orphanet:424107 | Congenital myopathy with myasthenic-like onset |
| RYR1 | Orphanet:466650 | Exercise-induced malignant hyperthermia |
| RYR1 | Orphanet:597 | Central core disease |
| RYR1 | Orphanet:700188 | Calf-predominant weakness-gastrocnemius medialis atrophy-distal myopathy |
| RYR1 | Orphanet:98905 | Congenital multicore myopathy with external ophthalmoplegia |
| RYR1 | Orphanet:99741 | King-Denborough syndrome |
| SARDH | Orphanet:3129 | Sarcosinemia |
| ATXN2 | Orphanet:803 | Amyotrophic lateral sclerosis |
| ATXN2 | Orphanet:98756 | Spinocerebellar ataxia type 2 |
| SGCG | Orphanet:353 | Gamma-sarcoglycan-related limb-girdle muscular dystrophy R5 |
| SKIC2 | Orphanet:84064 | Trichohepatoenteric syndrome |
| SLCO1B1 | Orphanet:3111 | Rotor syndrome |
| SLC22A5 | Orphanet:158 | Systemic primary carnitine deficiency |
| SLC34A1 | Orphanet:157215 | Hereditary hypophosphatemic rickets with hypercalciuria |
| SLC34A1 | Orphanet:244305 | Dominant hypophosphatemia with nephrolithiasis or osteoporosis |
| SLC34A1 | Orphanet:300547 | Autosomal recessive infantile hypercalcemia |
| SLC34A1 | Orphanet:3337 | Primary Fanconi renotubular syndrome |
| SMARCA2 | Orphanet:3051 | Nicolaides-Baraitser syndrome |
| SMARCA2 | Orphanet:637013 | SMARCA2-related blepharophimosis-intellectual disability syndrome |
| SMARCC2 | Orphanet:1465 | Coffin-Siris syndrome |
Cohort genes → proteins
75 cohort genes, 67 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|
| gwas_only | 74 |
| gwas_and_clinvar | 1 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|
| CARD11 | HGNC:16393 | ENSG00000198286 | Q9BXL7 | Caspase recruitment domain-containing protein 11 | gwas,clinvar |
| BCL6 | HGNC:1001 | ENSG00000113916 | P41182 | B-cell lymphoma 6 protein | gwas |
| RHO | HGNC:10012 | ENSG00000163914 | P08100 | Rhodopsin | gwas |
| RING1 | HGNC:10018 | ENSG00000204227 | Q06587 | E3 ubiquitin-protein ligase RING1 | gwas |
| RNF14 | HGNC:10058 | ENSG00000013561 | Q9UBS8 | E3 ubiquitin-protein ligase RNF14 | gwas |
| RNF5 | HGNC:10068 | ENSG00000204308 | Q99942 | E3 ubiquitin-protein ligase RNF5 | gwas |
| BCR | HGNC:1014 | ENSG00000186716 | P11274 | Breakpoint cluster region protein | gwas |
| SNORD21 | HGNC:10144 | ENSG00000206680 | | small nucleolar RNA, C/D box 21 | gwas |
| SNORD48 | HGNC:10188 | ENSG00000201823 | | small nucleolar RNA, C/D box 48 | gwas |
| SNORD52 | HGNC:10202 | ENSG00000201754 | | small nucleolar RNA, C/D box 52 | gwas |
| SNORA66 | HGNC:10223 | ENSG00000207523 | | small nucleolar RNA, H/ACA box 66 | gwas |
| RORA | HGNC:10258 | ENSG00000069667 | P35398 | Nuclear receptor ROR-alpha | gwas |
| RORC | HGNC:10260 | ENSG00000143365 | P51449 | Nuclear receptor ROR-gamma | gwas |
| RPL19 | HGNC:10312 | ENSG00000108298 | P84098 | Large ribosomal subunit protein eL19 | gwas |
| RPL41 | HGNC:10354 | ENSG00000229117 | P62945 | Small ribosomal subunit protein eS32 | gwas |
| RPL41P2 | HGNC:10357 | ENSG00000256338 | | ribosomal protein L41 pseudogene 2 | gwas |
| RPL5 | HGNC:10360 | ENSG00000122406 | P46777 | Large ribosomal subunit protein uL18 | gwas |
| CFB | HGNC:1037 | ENSG00000243649 | P00751 | Complement factor B | gwas |
| RPS26 | HGNC:10414 | ENSG00000197728 | P62854 | Small ribosomal subunit protein eS26 | gwas |
| RUNX1 | HGNC:10471 | ENSG00000159216 | Q01196 | Runt-related transcription factor 1 | gwas |
| RUNX3 | HGNC:10473 | ENSG00000020633 | Q13761 | Runt-related transcription factor 3 | gwas |
| RYBP | HGNC:10480 | ENSG00000163602 | Q8N488 | RING1 and YY1-binding protein | gwas |
| RYR1 | HGNC:10483 | ENSG00000196218 | P21817 | Ryanodine receptor 1 | gwas |
| S100A10 | HGNC:10487 | ENSG00000197747 | P60903 | Protein S100-A10 | gwas |
| S100A11 | HGNC:10488 | ENSG00000163191 | P31949 | Protein S100-A11 | gwas |
| S100A12 | HGNC:10489 | ENSG00000163221 | P80511 | Protein S100-A12 | gwas |
| S100A8 | HGNC:10498 | ENSG00000143546 | P05109 | Protein S100-A8 | gwas |
| S100A9 | HGNC:10499 | ENSG00000163220 | P06702 | Protein S100-A9 | gwas |
| BID | HGNC:1050 | ENSG00000015475 | P55957 | BH3-interacting domain death agonist | gwas |
| SARDH | HGNC:10536 | ENSG00000123453 | Q9UL12 | Sarcosine dehydrogenase, mitochondrial | gwas |
| ATXN2 | HGNC:10555 | ENSG00000204842 | Q99700 | Ataxin-2 | gwas |
| CXCR5 | HGNC:1060 | ENSG00000160683 | P32302 | C-X-C chemokine receptor type 5 | gwas |
| CCL20 | HGNC:10619 | ENSG00000115009 | P78556 | C-C motif chemokine 20 | gwas |
| CCL22 | HGNC:10621 | ENSG00000102962 | O00626 | C-C motif chemokine 22 | gwas |
| SEMG2 | HGNC:10743 | ENSG00000124157 | Q02383 | Semenogelin-2 | gwas |
| SGCG | HGNC:10809 | ENSG00000102683 | Q13326 | Gamma-sarcoglycan | gwas |
| SHMT2 | HGNC:10852 | ENSG00000182199 | P34897 | Serine hydroxymethyltransferase, mitochondrial | gwas |
| PMEL | HGNC:10880 | ENSG00000185664 | P40967 | Melanocyte protein PMEL | gwas |
| SIM2 | HGNC:10883 | ENSG00000159263 | Q14190 | Single-minded homolog 2 | gwas |
| SIPA1 | HGNC:10885 | ENSG00000213445 | Q96FS4 | Signal-induced proliferation-associated protein 1 | gwas |
| SKIC2 | HGNC:10898 | ENSG00000204351 | Q15477 | Superkiller complex protein 2 | gwas |
| SLCO1A2 | HGNC:10956 | ENSG00000084453 | P46721 | Solute carrier organic anion transporter family member 1A2 | gwas |
| SLCO1B1 | HGNC:10959 | ENSG00000134538 | Q9Y6L6 | Solute carrier organic anion transporter family member 1B1 | gwas |
| SLC22A4 | HGNC:10968 | ENSG00000197208 | Q9H015 | Solute carrier family 22 member 4 | gwas |
| SLC22A5 | HGNC:10969 | ENSG00000197375 | O76082 | Organic cation/carnitine transporter 2 | gwas |
| SLC24A2 | HGNC:10976 | ENSG00000155886 | Q9UI40 | Sodium/potassium/calcium exchanger 2 | gwas |
| BRAP | HGNC:1099 | ENSG00000089234 | Q7Z569 | BRCA1-associated protein | gwas |
| SLC34A1 | HGNC:11019 | ENSG00000131183 | Q06495 | Sodium-dependent phosphate transport protein 2A | gwas |
| BRD2 | HGNC:1103 | ENSG00000204256 | P25440 | Bromodomain-containing protein 2 | gwas |
| SLC6A12 | HGNC:11045 | ENSG00000111181 | P48065 | Sodium- and chloride-dependent betaine transporter | gwas |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|
| CARD11 | Caspase recruitment domain-containing protein 11 | Adapter protein that plays a key role in adaptive immune response by transducing the activation of NF-kappa-B downstream of T-cell receptor (TCR) and B-cell receptor (BCR) engagement. |
| BCL6 | B-cell lymphoma 6 protein | Transcriptional repressor mainly required for germinal center (GC) formation and antibody affinity maturation which has different mechanisms of action specific to the lineage and biological functions. |
| RHO | Rhodopsin | Photoreceptor required for image-forming vision at low light intensity. |
| RING1 | E3 ubiquitin-protein ligase RING1 | Constitutes one of the E3 ubiquitin-protein ligases that mediate monoubiquitination of ‘Lys-119’ of histone H2A, thereby playing a central role in histone code and gene regulation. |
| RNF14 | E3 ubiquitin-protein ligase RNF14 | E3 ubiquitin-protein ligase that plays a key role in the RNF14-RNF25 translation quality control pathway, a pathway that takes place when a ribosome has stalled during translation, and which promotes ubiquitination and degradation of trans… |
| RNF5 | E3 ubiquitin-protein ligase RNF5 | Membrane-bound E3 ubiquitin-protein ligase that mediates ubiquitination of target proteins. |
| BCR | Breakpoint cluster region protein | Protein with a unique structure having two opposing regulatory activities toward small GTP-binding proteins. |
| RORA | Nuclear receptor ROR-alpha | Nuclear receptor that binds DNA as a monomer to ROR response elements (RORE) containing a single core motif half-site 5’-AGGTCA-3’ preceded by a short A-T-rich sequence. |
| RORC | Nuclear receptor ROR-gamma | Nuclear receptor that binds DNA as a monomer to ROR response elements (RORE) containing a single core motif half-site 5’-AGGTCA-3’ preceded by a short A-T-rich sequence. |
| RPL19 | Large ribosomal subunit protein eL19 | Component of the large ribosomal subunit. |
| RPL41 | Small ribosomal subunit protein eS32 | Component of the small ribosomal subunit (Ref.8). |
| RPL5 | Large ribosomal subunit protein uL18 | Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. |
| CFB | Complement factor B | Precursor of the catalytic component of the C3 and C5 convertase complexes of the alternative pathway of the complement system, a cascade of proteins that leads to phagocytosis and breakdown of pathogens and signaling that strengthens the… |
| RPS26 | Small ribosomal subunit protein eS26 | Component of the small ribosomal subunit. |
| RUNX1 | Runt-related transcription factor 1 | Forms the heterodimeric complex core-binding factor (CBF) with CBFB. |
| RUNX3 | Runt-related transcription factor 3 | Forms the heterodimeric complex core-binding factor (CBF) with CBFB. |
| RYBP | RING1 and YY1-binding protein | Component of a Polycomb group (PcG) multiprotein PRC1-like complex, a complex class required to maintain the transcriptionally repressive state of many genes, including Hox genes, throughout development. |
| RYR1 | Ryanodine receptor 1 | Cytosolic calcium-activated calcium channel that mediates the release of Ca(2+) from the sarcoplasmic reticulum into the cytosol and thereby plays a key role in triggering muscle contraction following depolarization of T-tubules. |
| S100A10 | Protein S100-A10 | Because S100A10 induces the dimerization of ANXA2/p36, it may function as a regulator of protein phosphorylation in that the ANXA2 monomer is the preferred target (in vitro) of tyrosine-specific kinase. |
| S100A11 | Protein S100-A11 | Facilitates the differentiation and the cornification of keratinocytes. |
| S100A12 | Protein S100-A12 | S100A12 is a calcium-, zinc- and copper-binding protein which plays a prominent role in the regulation of inflammatory processes and immune response. |
| S100A8 | Protein S100-A8 | S100A8 is a calcium- and zinc-binding protein which plays a prominent role in the regulation of inflammatory processes and immune response. |
| S100A9 | Protein S100-A9 | S100A9 is a calcium- and zinc-binding protein which plays a prominent role in the regulation of inflammatory processes and immune response. |
| BID | BH3-interacting domain death agonist | Induces caspases and apoptosis. |
| SARDH | Sarcosine dehydrogenase, mitochondrial | Catalyzes the last step of the oxidative degradation of choline to glycine. |
| ATXN2 | Ataxin-2 | Involved in EGFR trafficking, acting as negative regulator of endocytic EGFR internalization at the plasma membrane. |
| CXCR5 | C-X-C chemokine receptor type 5 | Cytokine receptor that binds to B-lymphocyte chemoattractant (BLC). |
| CCL20 | C-C motif chemokine 20 | Acts as a ligand for C-C chemokine receptor CCR6. |
| CCL22 | C-C motif chemokine 22 | May play a role in the trafficking of activated/effector T-lymphocytes to inflammatory sites and other aspects of activated T-lymphocyte physiology. |
| SEMG2 | Semenogelin-2 | Participates in the formation of a gel matrix (sperm coagulum) entrapping the accessory gland secretions and ejaculated spermatozoa. |
| SGCG | Gamma-sarcoglycan | Component of the sarcoglycan complex, a subcomplex of the dystrophin-glycoprotein complex which forms a link between the F-actin cytoskeleton and the extracellular matrix. |
| SHMT2 | Serine hydroxymethyltransferase, mitochondrial | Catalyzes the cleavage of serine to glycine accompanied with the production of 5,10-methylenetetrahydrofolate, an essential intermediate for purine biosynthesis. |
| PMEL | Melanocyte protein PMEL | Forms physiological amyloids that play a central role in melanosome morphogenesis and pigmentation. |
| SIM2 | Single-minded homolog 2 | Transcription factor that may be a master gene of CNS development in cooperation with Arnt. |
| SIPA1 | Signal-induced proliferation-associated protein 1 | GTPase activator for the nuclear Ras-related regulatory proteins Rap1 and Rap2 in vitro, converting them to the putatively inactive GDP-bound state. |
| SKIC2 | Superkiller complex protein 2 | Helicase component of the SKI complex, a multiprotein complex that assists the RNA-degrading exosome during the mRNA decay and quality-control pathways. |
| SLCO1A2 | Solute carrier organic anion transporter family member 1A2 | Na(+)-independent transporter that mediates the cellular uptake of a broad range of organic anions such as the endogenous bile salts cholate and deoxycholate, either in their unconjugated or conjugated forms (taurocholate and glycocholate)… |
| SLCO1B1 | Solute carrier organic anion transporter family member 1B1 | Mediates the Na(+)-independent uptake of organic anions. |
| SLC22A4 | Solute carrier family 22 member 4 | Transporter that mediates the transport of endogenous and microbial zwitterions and organic cations. |
| SLC22A5 | Organic cation/carnitine transporter 2 | Sodium-ion dependent, high affinity carnitine transporter. |
| SLC24A2 | Sodium/potassium/calcium exchanger 2 | Calcium, potassium:sodium antiporter that transports 1 Ca(2+) and 1 K(+) in exchange for 4 Na(+). |
| BRAP | BRCA1-associated protein | Negatively regulates MAP kinase activation by limiting the formation of Raf/MEK complexes probably by inactivation of the KSR1 scaffold protein. |
| SLC34A1 | Sodium-dependent phosphate transport protein 2A | Involved in actively transporting phosphate into cells via Na(+) cotransport in the renal brush border membrane. |
| BRD2 | Bromodomain-containing protein 2 | Chromatin reader protein that specifically recognizes and binds histone H4 acetylated at ‘Lys-5’ and ‘Lys-12’ (H4K5ac and H4K12ac, respectively), thereby controlling gene expression and remodeling chromatin structures. |
| SLC6A12 | Sodium- and chloride-dependent betaine transporter | Transporter that mediates cellular uptake of betaine and GABA in a sodium- and chloride-dependent process. |
| SLC6A13 | Sodium- and chloride-dependent GABA transporter 2 | Mediates sodium- and chloride-dependent transport of gamma-aminobutyric acid (GABA). |
| SLC7A10 | Asc-type amino acid transporter 1 | Associates with SLC3A2/4F2hc to form a functional heterodimeric complex that translocates small neutral L- and D-amino acids across the plasma membrane. |
| SLC8A1 | Sodium/calcium exchanger 1 | Mediates the exchange of one Ca(2+) ion against three to four Na(+) ions across the cell membrane, and thereby contributes to the regulation of cytoplasmic Ca(2+) levels and Ca(2+)-dependent cellular processes. |
| ZFP36L1 | mRNA decay activator protein ZFP36L1 | Zinc-finger RNA-binding protein that destabilizes several cytoplasmic AU-rich element (ARE)-containing mRNA transcripts by promoting their poly(A) tail removal or deadenylation, and hence provide a mechanism for attenuating protein synthes… |
| SLC9A2 | Sodium/hydrogen exchanger 2 | Plasma membrane Na(+)/H(+) antiporter. |
Protein-family classification
Druggable: 14 · Difficult: 16 · Unknown: 45 · Druggable fraction: 0.19
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|
| Transporter | 5 | 5.2× | 0.028 |
| Nuclear receptor | 2 | 10.3× | 0.081 |
| Transcription factor | 13 | 1.4× | 0.386 |
| Other/Unknown | 45 | 1.1× | 0.676 |
| Ion channel | 1 | 1.5× | 0.984 |
| Scaffold/PPI | 3 | 0.7× | 0.989 |
| GPCR | 2 | 0.6× | 0.989 |
| Protease | 1 | 0.5× | 0.989 |
| Antibody/Immunoglobulin | 1 | 0.4× | 0.989 |
| Enzyme (other) | 2 | 0.3× | 0.989 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|
| CARD11 | Scaffold/PPI | no | | CARD, DEATH-like_dom_sf, P-loop_NTPase |
| BCL6 | Transcription factor | no | | BTB/POZ_dom, SKP1/BTB/POZ_sf, Znf_C2H2_type |
| RHO | GPCR | yes | | GPCR_Rhodpsn, Rhodopsin, Opsin |
| RING1 | Transcription factor | no | | Znf_RING, Znf_RING/FYVE/PHD, Znf_RING_CS |
| RNF14 | Transcription factor | no | | Znf_RING, IBR_dom, RWD_dom |
| RNF5 | Transcription factor | no | | Znf_RING, Znf_RING/FYVE/PHD, Znf_RING_CS |
| BCR | Scaffold/PPI | no | | C2_dom, RhoGAP_dom, DH_dom |
| SNORD21 | Other/Unknown | no | | |
| SNORD48 | Other/Unknown | no | | |
| SNORD52 | Other/Unknown | no | | |
| SNORA66 | Other/Unknown | no | | |
| RORA | Nuclear receptor | yes | | Nucl_hrmn_rcpt_lig-bd, Znf_hrmn_rcpt, Nuclear_hrmn_rcpt |
| RORC | Nuclear receptor | yes | | Nucl_hrmn_rcpt_lig-bd, Znf_hrmn_rcpt, Nuclear_hrmn_rcpt |
| RPL19 | Other/Unknown | no | | Ribosomal_eL19_dom, Ribosomal_eL19_dom1, Ribosomal_eL19_CS |
| RPL41 | Other/Unknown | no | | Ribosomal_eS32 |
| RPL41P2 | Other/Unknown | no | | |
| RPL5 | Other/Unknown | no | | Rbsml_uL18_euk_arc, Ribosomal_uL18_C_euk, Ribosomal_L18 |
| CFB | Protease | yes | 3.4.21.47 | Sushi_SCR_CCP_dom, Trypsin_dom, Peptidase_S1A |
| RPS26 | Other/Unknown | no | | Ribosomal_eS26, Ribosomal_eS26_sf, Ribosomal_eS26_CS |
| RUNX1 | Transcription factor | no | | AML1_Runt, p53-like_TF_DNA-bd_sf, p53/RUNT-type_TF_DNA-bd_sf |
| RUNX3 | Transcription factor | no | | AML1_Runt, p53-like_TF_DNA-bd_sf, p53/RUNT-type_TF_DNA-bd_sf |
| RYBP | Transcription factor | no | | Znf_RanBP2, YAF2_RYBP, Znf_RanBP2_sf |
| RYR1 | Ion channel | yes | | RIH_dom, B30.2/SPRY, Ryanodine_rcpt |
| S100A10 | Other/Unknown | no | | S100/CaBP7/8-like_CS, EF-hand-dom_pair, S100_Ca-bd_sub |
| S100A11 | Other/Unknown | no | | S100/CaBP7/8-like_CS, EF_hand_dom, EF-hand-dom_pair |
| S100A12 | Other/Unknown | no | | S100/CaBP7/8-like_CS, EF_hand_dom, EF-hand-dom_pair |
| S100A8 | Other/Unknown | no | | S100/CaBP7/8-like_CS, EF_hand_dom, EF-hand-dom_pair |
| S100A9 | Other/Unknown | no | | S100/CaBP7/8-like_CS, EF_hand_dom, EF-hand-dom_pair |
| BID | Other/Unknown | no | | BID, Bcl2_BH3_motif_CS, Bcl-2-like_sf |
| SARDH | Other/Unknown | no | | FAD-dep_OxRdtase, GCVT_N, GcvT_C |
| ATXN2 | Other/Unknown | no | | LsmAD_domain, PAM2_motif, LSM_dom_sf |
| CXCR5 | GPCR | yes | | GPCR_Rhodpsn, Chemokine_CXCR5, GPCR_Rhodpsn_7TM |
| CCL20 | Other/Unknown | no | | Chemokine_CC_CS, Chemokine_IL8-like_dom, Chemokine_CC_DCCL |
| CCL22 | Other/Unknown | no | | Chemokine_CC_CS, Chemokine_IL8-like_dom, Interleukin_8-like_sf |
| SEMG2 | Other/Unknown | no | | Semenogelin |
| SGCG | Other/Unknown | no | | Sarcoglycan, Sarcoglycan_gamma/delta/zeta |
| SHMT2 | Enzyme (other) | yes | 2.1.2.1 | Ser_HO-MeTrfase, PyrdxlP-dep_Trfase_major, PyrdxlP-dep_Trfase_small |
| PMEL | Antibody/Immunoglobulin | yes | | PKD_dom, Ig-like_fold, PKD/Chitinase_dom |
| SIM2 | Transcription factor | no | | PAS, PAC, SIM_C |
| SIPA1 | Scaffold/PPI | no | | Rap/Ran_GAP_dom, PDZ, Rap/Ran-GAP_sf |
| SKIC2 | Other/Unknown | no | | Helicase_C-like, DEAD/DEAH_box_helicase_dom, Ski2/MTR4_C |
| SLCO1A2 | Transporter | yes | | Kazal_dom, OATP, MFS_dom |
| SLCO1B1 | Transporter | yes | | Kazal_dom, OATP, MFS_dom |
| SLC22A4 | Transporter | yes | | Orgcat_transp/SVOP, MFS_sugar_transport-like, Sugar_transporter_CS |
| SLC22A5 | Transporter | yes | | Orgcat_transp/SVOP, MFS_sugar_transport-like, Sugar_transporter_CS |
| SLC24A2 | Other/Unknown | no | | K/Na/Ca-exchanger, NaCa_Exmemb, NCX_ion-bd_dom_sf |
| BRAP | Transcription factor | no | | Znf_UBP, Znf_RING, BRAP2/ETP1_RRM |
| SLC34A1 | Other/Unknown | no | | Na/Pi_transpt |
| BRD2 | Other/Unknown | no | | Bromodomain, Bromodomain_CS, NET_dom |
| SLC6A12 | Other/Unknown | no | | Na/ntran_symport, Na/ntran_symport_betaine, SNS_sf |
Expression context
Cohort genes with no expression data: 0.
65 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 1 |
| broad (>20) | 74 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|
| lower esophagus mucosa | 12 |
| granulocyte | 9 |
| ganglionic eminence | 6 |
| liver | 6 |
| male germ line stem cell (sensu Vertebrata) in testis | 6 |
| right lobe of liver | 6 |
| buccal mucosa cell | 5 |
| gastrocnemius | 4 |
| adrenal tissue | 4 |
| endothelial cell | 4 |
| cortical plate | 4 |
| sural nerve | 4 |
| monocyte | 4 |
| ventricular zone | 4 |
| lymph node | 3 |
| spleen | 3 |
| vermiform appendix | 3 |
| calcaneal tendon | 3 |
| primordial germ cell in gonad | 3 |
| mucosa of transverse colon | 3 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|
| CARD11 | 188 | broad | marker | granulocyte, lymph node, spleen |
| BCL6 | 300 | ubiquitous | marker | gastrocnemius, mucosa of stomach, blood |
| RHO | 38 | tissue_specific | marker | optic choroid, neuron projection bundle connecting eye with brain, diaphragm |
| RING1 | 133 | ubiquitous | marker | pituitary gland, adenohypophysis, right lobe of thyroid gland |
| RNF14 | 289 | ubiquitous | marker | adrenal tissue, endothelial cell, oocyte |
| RNF5 | 134 | ubiquitous | marker | ganglionic eminence, adult mammalian kidney, cortical plate |
| BCR | 275 | ubiquitous | marker | nucleus accumbens, caudate nucleus, putamen |
| SNORD21 | 59 | | yes | sural nerve, liver, adrenal tissue |
| SNORD48 | 74 | tissue_specific | yes | sural nerve, vermiform appendix, liver |
| SNORD52 | 8 | tissue_specific | yes | sural nerve, Brodmann (1909) area 9, liver |
| SNORA66 | 121 | | yes | sural nerve, lower esophagus mucosa, adrenal tissue |
| RORA | 284 | ubiquitous | marker | upper leg skin, lateral nuclear group of thalamus, skin of hip |
| RORC | 209 | broad | marker | gastrocnemius, male germ line stem cell (sensu Vertebrata) in testis, hindlimb stylopod muscle |
| RPL19 | 301 | ubiquitous | marker | primordial germ cell in gonad, calcaneal tendon, granulocyte |
| RPL41 | 134 | ubiquitous | marker | ovary, right ovary, left ovary |
| RPL41P2 | 133 | broad | marker | bone marrow cell, vermiform appendix, duodenum |
| RPL5 | 292 | ubiquitous | marker | germinal epithelium of ovary, primordial germ cell in gonad, parietal pleura |
| CFB | 134 | broad | marker | right lobe of liver, liver, gall bladder |
| RPS26 | 140 | ubiquitous | marker | granulocyte, left adrenal gland cortex, mucosa of transverse colon |
| RUNX1 | 253 | ubiquitous | marker | olfactory segment of nasal mucosa, epithelium of bronchus, mucosa of paranasal sinus |
| RUNX3 | 220 | broad | marker | granulocyte, buccal mucosa cell, lymph node |
| RYBP | 292 | tissue_specific | marker | lower lobe of lung, cartilage tissue, endothelial cell |
| RYR1 | 214 | broad | marker | gluteal muscle, gastrocnemius, hindlimb stylopod muscle |
| S100A10 | 295 | ubiquitous | marker | mucosa of sigmoid colon, colonic mucosa, dorsal root ganglion |
| S100A11 | 292 | ubiquitous | marker | lower esophagus mucosa, esophagus mucosa, olfactory segment of nasal mucosa |
| S100A12 | 212 | broad | marker | trabecular bone tissue, monocyte, bone marrow |
| S100A8 | 274 | broad | marker | pharyngeal mucosa, monocyte, mononuclear cell |
| S100A9 | 244 | broad | marker | granulocyte, monocyte, leukocyte |
| BID | 253 | ubiquitous | marker | monocyte, leukocyte, mononuclear cell |
| SARDH | 173 | broad | marker | right lobe of liver, buccal mucosa cell, liver |
Protein interactions among cohort
Intra-cohort edges: 48.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|
| RPL5 | 6,028 |
| SHMT2 | 5,293 |
| RUNX1 | 4,994 |
| SMARCA2 | 4,237 |
| BCL6 | 3,984 |
| S100A9 | 3,907 |
| SMARCC2 | 3,686 |
| CARD11 | 3,587 |
| RHO | 3,578 |
| S100A8 | 3,432 |
Intra-cohort edges
| A | B | Sources |
|---|
| BCL6 | CXCR5 | string_interaction |
| BRD2 | RUNX3 | intact |
| RHO | SLC24A2 | string_interaction |
| RING1 | RYBP | biogrid_interaction, intact, string_interaction |
| RPL5 | RPS26 | biogrid_interaction |
| RUNX1 | RUNX3 | string_interaction |
| RUNX1 | SLC22A4 | string_interaction |
| S100A10 | SLC8A1 | intact |
| S100A11 | SLC8A1 | intact |
| S100A12 | S100A8 | string_interaction |
| S100A12 | SLC8A1 | intact |
| S100A8 | S100A9 | biogrid_interaction, intact, string_interaction |
| S100A8 | SLC8A1 | intact |
| S100A9 | SLC8A1 | intact |
| S100A9 | SPRR2E | biogrid_interaction |
| SARDH | SHMT2 | string_interaction |
| SHMT2 | SNORA66 | biogrid_interaction |
| SHMT2 | SNORD21 | biogrid_interaction |
| SLC22A4 | SLC22A5 | intact |
| SLC22A4 | SLCO1A2 | string_interaction |
| SLC22A5 | SLCO1A2 | string_interaction |
| SMARCA2 | SMARCC2 | intact, string_interaction |
| SMARCA2 | SMARCE1 | intact, string_interaction |
| SMARCC2 | SMARCE1 | intact, string_interaction |
| SPRR1A | SPRR2A | string_interaction |
| SPRR1A | SPRR2D | string_interaction |
| SPRR1A | SPRR2E | string_interaction |
| SPRR1A | SPRR2F | string_interaction |
| SPRR1A | SPRR2G | string_interaction |
| SPRR1B | SPRR2A | string_interaction |
| SPRR1B | SPRR2D | string_interaction |
| SPRR1B | SPRR2E | string_interaction |
| SPRR1B | SPRR2F | string_interaction |
| SPRR1B | SPRR2G | string_interaction |
| SPRR2A | SPRR2D | string_interaction |
| SPRR2A | SPRR2E | string_interaction |
| SPRR2A | SPRR2F | string_interaction |
| SPRR2A | SPRR3 | string_interaction |
| SPRR2D | SPRR2E | string_interaction |
| SPRR2D | SPRR2F | string_interaction |
| SPRR2D | SPRR2G | string_interaction |
| SPRR2D | SPRR3 | string_interaction |
| SPRR2E | SPRR2F | string_interaction |
| SPRR2E | SPRR2G | string_interaction |
| SPRR2E | SPRR3 | string_interaction |
| SPRR2F | SPRR2G | string_interaction |
| SPRR2F | SPRR3 | string_interaction |
| SPRR2G | SPRR3 | string_interaction |
Structural data
PDB: 38 · AlphaFold-only: 29 · No structure: 8
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|
| BCL6 | P41182 | 246 |
| RPL19 | P84098 | 190 |
| RPS26 | P62854 | 190 |
| RPL41 | P62945 | 185 |
| RPL5 | P46777 | 184 |
| BRD2 | P25440 | 174 |
| RORC | P51449 | 161 |
| SNRPB2 | P08579 | 50 |
| SMARCA2 | P51531 | 32 |
| SHMT2 | P34897 | 27 |
| CFB | P00751 | 26 |
| PMEL | P40967 | 20 |
| BID | P55957 | 17 |
| S100A8 | P05109 | 13 |
| S100A9 | P06702 | 13 |
| SKIC2 | Q15477 | 11 |
| S100A12 | P80511 | 9 |
| SLCO1B1 | Q9Y6L6 | 9 |
| SMARCC2 | Q8TAQ2 | 9 |
| SMARCE1 | Q969G3 | 8 |
| S100A10 | P60903 | 7 |
| CCL20 | P78556 | 6 |
| BCR | P11274 | 5 |
| RUNX1 | Q01196 | 5 |
| RYBP | Q8N488 | 5 |
| SLC8A1 | P32418 | 5 |
| RHO | P08100 | 4 |
| SLC7A10 | Q9NS82 | 4 |
| SMPD1 | P17405 | 4 |
| RORA | P35398 | 3 |
AlphaFold-only cohort genes (top 30 by pLDDT)
| Symbol | UniProt | pLDDT |
|---|
| SARDH | Q9UL12 | 93.03 |
| SLC6A13 | Q9NSD5 | 89.18 |
| CCL22 | O00626 | 88.21 |
| SLC22A4 | Q9H015 | 85.07 |
| RNF14 | Q9UBS8 | 83.00 |
| CXCR5 | P32302 | 80.85 |
| SGCG | Q13326 | 80.24 |
| SLCO1A2 | P46721 | 79.97 |
| SPRR2B | P35325 | 78.45 |
| SPRR2G | Q9BYE4 | 77.94 |
| SPRR2E | P22531 | 77.66 |
| SPRR2D | P22532 | 77.37 |
| SPRR2A | P35326 | 77.32 |
| BRAP | Q7Z569 | 76.92 |
| SPRR2F | Q96RM1 | 75.55 |
| RING1 | Q06587 | 72.69 |
| SLC34A1 | Q06495 | 72.24 |
| SIPA1 | Q96FS4 | 72.20 |
| SPRR1B | P22528 | 70.02 |
| SPRR1A | P35321 | 69.36 |
| RNF5 | Q99942 | 68.71 |
| SLC24A2 | Q9UI40 | 67.75 |
| SLC9A4 | Q6AI14 | 66.73 |
| SLC9A2 | Q9UBY0 | 66.40 |
| SIM2 | Q14190 | 63.05 |
| SOX1 | O00570 | 59.29 |
| SPRR3 | Q9UBC9 | 52.87 |
| SP2 | Q02086 | 45.39 |
| SEMG2 | Q02383 | 30.69 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 604. Enrichment computed across 250 evidence-associated genes (169 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 169 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|
| TNFs bind their physiological receptors | 8 | 18.6× | 4e-06 | TNFRSF1B, TNFRSF6B, TNFRSF8, TNFSF15, TNFSF18, TNFSF4, FASLG, CD70 |
| Differentiation of naive CD4+ T cells to T helper 1 cells (Th1 cells) | 4 | 20.8× | 0.004 | RUNX1, RUNX3, TBX21, TNF |
| RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known | 6 | 10.7× | 0.004 | RING1, RUNX1, RYBP, SMARCA2, SMARCC2, SMARCE1 |
| Formation of the cornified envelope | 10 | 5.2× | 0.004 | SPRR1A, SPRR1B, SPRR2A, SPRR2B, SPRR2D, SPRR2E, SPRR2F, SPRR2G (+2 more) |
| SLC-mediated transmembrane transport | 12 | 4.2× | 0.004 | RUNX1, SLCO1A2, SLCO1B1, SLC22A4, SLC22A5, SLC24A2, SLC6A12, SLC6A13 (+4 more) |
| Interleukin-4 and Interleukin-13 signaling | 9 | 5.5× | 0.004 | BCL6, RORA, RORC, CCL22, STAT6, TNF, TNFRSF1B, FASLG (+1 more) |
| Transport of small molecules | 18 | 2.7× | 0.011 | RNF5, RUNX1, RYR1, SLCO1A2, SLCO1B1, SLC22A4, SLC22A5, SLC24A2 (+10 more) |
| Activation of C3 and C5 | 3 | 22.5× | 0.019 | CFB, C2, C4A |
| RUNX3 regulates p14-ARF | 3 | 20.3× | 0.021 | RUNX1, RUNX3, BRD2 |
| TNFR2 non-canonical NF-kB pathway | 6 | 6.4× | 0.021 | TNF, TNFRSF11A, TNFRSF1B, FASLG, CD70, TRAF3 |
| RUNX3 regulates RUNX1-mediated transcription | 2 | 45.0× | 0.036 | RUNX1, RUNX3 |
| Regulation of TNFR1 signaling | 5 | 6.6× | 0.046 | TAX1BP1, TNF, TNFAIP3, TRAF1, UBE2D3 |
| Reuptake of GABA | 2 | 33.8× | 0.052 | SLC6A12, SLC6A13 |
| SLC-mediated transport of organic cations | 3 | 13.5× | 0.052 | RUNX1, SLC22A4, SLC22A5 |
| R-HSA-549132 | 3 | 13.5× | 0.052 | RUNX1, SLC22A4, SLC22A5 |
| Negative regulators of DDX58/IFIH1 signaling | 4 | 7.7× | 0.064 | TAX1BP1, TNFAIP3, TRAF3, UBE2D3 |
| R-HSA-425393 | 6 | 4.6× | 0.068 | SLC24A2, SLC6A12, SLC7A10, SLC8A1, SLC9A2, SLC9A4 |
| Formation of the polybromo-BAF (pBAF) complex | 3 | 11.3× | 0.074 | SMARCA2, SMARCC2, SMARCE1 |
| R-HSA-425366 | 5 | 5.4× | 0.075 | RUNX1, SLC22A4, SLC22A5, SLC6A12, SLC6A13 |
| MyD88 deficiency (TLR2/4) | 3 | 10.7× | 0.078 | S100A8, S100A9, TLR1 |
| Tachykinin receptors bind tachykinins | 2 | 22.5× | 0.079 | TAC3, TACR1 |
| RUNX3 Regulates Immune Response and Cell Migration | 2 | 22.5× | 0.079 | RORC, RUNX3 |
| IRAK4 deficiency (TLR2/4) | 3 | 10.1× | 0.079 | S100A8, S100A9, TLR1 |
| Developmental Biology | 22 | 1.9× | 0.079 | RPL41, RPS26, RUNX1, SMARCA2, SMARCC2, SMARCE1, SOX1, SPRR1A (+14 more) |
| Transcriptional regulation by RUNX3 | 4 | 6.4× | 0.080 | RUNX1, RUNX3, BRD2, TEAD1 |
| Keratinization | 9 | 3.0× | 0.080 | SPRR1A, SPRR1B, SPRR2A, SPRR2B, SPRR2D, SPRR2E, SPRR2F, SPRR2G (+1 more) |
| Regulation of MITF-M-dependent genes involved in pigmentation | 4 | 6.3× | 0.082 | PMEL, SMARCA2, SMARCC2, SMARCE1 |
| Metal sequestration by antimicrobial proteins | 2 | 19.3× | 0.094 | S100A8, S100A9 |
| Regulation of TLR by endogenous ligand | 3 | 8.8× | 0.094 | S100A8, S100A9, TLR1 |
| Choline catabolism | 2 | 16.9× | 0.099 | SARDH, SLC22A4 |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 221 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|
| regulation of transcription by RNA polymerase II | 44 | 2.3× | 1e-04 | RNF14, RORA, RORC, RUNX1, RUNX3, SIM2, BRD2, SMARCA2 (+36 more) |
| tumor necrosis factor-mediated signaling pathway | 8 | 12.0× | 2e-04 | TMSB4X, TNF, TNFRSF11A, TNFRSF1B, TNFSF18, CD70, TRAF1, TRAF3 |
| epidermis development | 8 | 7.6× | 0.005 | SPRR1A, SPRR1B, SPRR2B, SPRR2D, SPRR2E, SPRR2F, SPRR2G, SPRR3 |
| positive regulation of inflammatory response | 9 | 5.9× | 0.008 | S100A12, S100A8, S100A9, STAT5B, TNF, TNFSF18, TNFSF4, CCN4 (+1 more) |
| keratinocyte differentiation | 7 | 7.8× | 0.009 | BCR, SPRR1A, SPRR1B, SPRR2B, SPRR2F, SPRR2G, SPRR3 |
| regulation of T cell proliferation | 4 | 19.1× | 0.010 | BCL6, BID, TNFRSF1B, TNFSF18 |
| keratinization | 7 | 7.4× | 0.010 | SPRR1B, SPRR2B, SPRR2D, SPRR2F, SPRR2G, SPRR3, TCHH |
| regulation of steroid metabolic process | 3 | 32.7× | 0.014 | RORA, RORC, STAT5B |
| negative regulation of transcription by RNA polymerase II | 27 | 2.2× | 0.021 | BCL6, RORC, RUNX1, RUNX3, RYBP, SIM2, SMARCA2, SOX1 (+19 more) |
| regulation of endothelial cell apoptotic process | 2 | 76.2× | 0.025 | TEK, TNF |
| regulation of cytokine production | 6 | 6.7× | 0.035 | BCL6, BTN3A2, BTNL2, TRAF3, UBASH3A, CCN4 |
| inflammatory response | 16 | 2.7× | 0.035 | BCL6, S100A12, S100A8, S100A9, CCL20, CCL22, TACR1, TBXA2R (+8 more) |
| female courtship behavior | 2 | 50.8× | 0.042 | THRA, THRB |
| isotype switching to IgE isotypes | 2 | 50.8× | 0.042 | BCL6, STAT6 |
| neutrophil aggregation | 2 | 50.8× | 0.042 | S100A8, S100A9 |
| sodium ion import across plasma membrane | 4 | 11.3× | 0.042 | SLC34A1, SLC8A1, SLC9A2, SLC9A4 |
| osteoclast differentiation | 5 | 7.8× | 0.042 | TFRC, TNF, TNFRSF11A, TOB2, CCN4 |
| ossification | 6 | 6.2× | 0.042 | RUNX1, RUNX3, SLC34A1, THRA, TNFRSF11A, TWIST1 |
| regulation of B cell differentiation | 3 | 17.6× | 0.045 | CARD11, ZFP36L1, IKZF3 |
| thyroid hormone receptor signaling pathway | 2 | 38.1× | 0.052 | THRA, THRB |
| positive regulation of thyroid hormone receptor signaling pathway | 2 | 38.1× | 0.052 | THRA, THRB |
| T-helper 1 cell lineage commitment | 2 | 38.1× | 0.052 | STAT6, TBX21 |
| tolerance induction in gut-associated lymphoid tissue | 2 | 38.1× | 0.052 | RORC, ZBTB16 |
| citrate metabolic process | 2 | 38.1× | 0.052 | ACO1, ACO2 |
| carnitine transport | 2 | 38.1× | 0.052 | SLC22A4, SLC22A5 |
| negative regulation of CD4-positive, alpha-beta T cell differentiation | 2 | 38.1× | 0.052 | RUNX1, RUNX3 |
| gamma-aminobutyric acid reuptake | 2 | 38.1× | 0.052 | SLC6A12, SLC6A13 |
| obsolete positive regulation of NF-kappaB transcription factor activity | 6 | 5.6× | 0.052 | CARD11, S100A12, TNF, TNFSF18, TRAF1, CRNN |
| positive regulation of DNA-templated transcription | 18 | 2.3× | 0.052 | RNF14, RORA, RORC, RUNX1, RUNX3, RYBP, SMARCA2, SMARCC2 (+10 more) |
| positive regulation of blood pressure | 3 | 14.3× | 0.054 | TAC3, TACR1, TBXA2R |
Therapeutics
Drugs indicated for this disease
27 approved, 41 in late-stage (phase 3) trials. Disease-direct ChEMBL indications, not inferred from the associated-gene cohort below.
Earlier-phase candidates (phase 2, investigational — efficacy not yet established): Adalimumab, Alanine, Alendronic Acid, Ambrisentan, Amlitelimab, Amoxicillin, Antipyrine, Arformoterol, Arginine, Astegolimab, Atorvastatin, Benzocaine, Bosentan, Brodalumab, Clavulanic Acid, Clazakizumab, Clopidogrel, Curcumin, Daclizumab, Dexpramipexole, Doconexent, Dornase Alfa, Duvelisib, Ensifentrine, Esomeprazole, Etanercept, Fiboflapon, Fingolimod, Gefapixant, Glycine, Golimumab, INTERFERON BETA-1A, Itepekimab, L-Citrulline, Lenzilumab, Ligelizumab, Minocycline, Nadolol, Olodaterol, Palifermin, Pemirolast, Pioglitazone, Povorcitinib, Prasugrel, Propranolol, Ramatroban, Rilzabrutinib, Risankizumab, Rosiglitazone, Secukinumab, Semaglutide, Senicapoc, Setipiprant, Sirukumab, Sitaxentan, Sodium Chloride, Stapokibart, Tacrolimus Anhydrous, Terfenadine, Tozorakimab, Umeclidinium.
Drug target analysis
Approved (phase 4): 15 · Phase ≥3: 16 · Phased (≥1): 23 · Undrugged: 52
Druggability breadth: 97 of 250 evidence-associated genes (39%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Genes with an approved drug
The molecule shown is one approved compound that hits the gene — not necessarily a drug of choice or one indicated for this disease.
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|
| BCR | 64 | 4 |
| SLCO1B1 | 57 | 4 |
| RORC | 9 | 4 |
| BRD2 | 9 | 3 |
| SHMT2 | 7 | 4 |
| BID | 4 | 4 |
| SLC9A2 | 3 | 2 |
| SMPD1 | 3 | 4 |
| BCL6 | 2 | 2 |
| RORA | 2 | 4 |
Drugs targeting cohort genes (top 30)
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 3.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|
| RORC | 758 | Binding:707, Functional:50, Unclassified:1 |
| BRD2 | 681 | Binding:655, Functional:19, ADMET:7 |
| BCR | 486 | Binding:478, Functional:6, Toxicity:2 |
| SMARCA2 | 311 | Binding:274, Functional:25, ADMET:12 |
| SLCO1B1 | 242 | Functional:106, ADMET:82, Binding:53, Toxicity:1 |
| BCL6 | 209 | Binding:202, Functional:7 |
| RORA | 115 | Binding:111, Functional:3, Unclassified:1 |
| SLC22A5 | 97 | Functional:79, ADMET:18 |
| RPL19 | 90 | Binding:90 |
| RPL5 | 90 | Binding:90 |
| RPL41 | 89 | Binding:89 |
| RPS26 | 89 | Binding:89 |
| SLCO1A2 | 70 | Functional:60, ADMET:9, Binding:1 |
| SLC6A12 | 50 | Binding:48, Functional:2 |
| BID | 44 | Binding:44 |
| SMPD1 | 42 | Binding:40, Functional:2 |
| CFB | 33 | Binding:33 |
| CXCR5 | 33 | Binding:21, Functional:12 |
| SLC22A4 | 29 | Functional:26, ADMET:3 |
| RUNX1 | 20 | Binding:17, Functional:3 |
| RYR1 | 16 | Binding:13, Functional:3 |
| SLC6A13 | 15 | Binding:15 |
| S100A10 | 12 | Binding:12 |
| S100A9 | 10 | Binding:10 |
| SLC9A2 | 10 | Binding:8, Functional:2 |
| SLC8A1 | 9 | Binding:8, Functional:1 |
| SLC34A1 | 8 | Binding:7, Functional:1 |
| SMARCC2 | 7 | Binding:7 |
| SMARCE1 | 7 | Binding:7 |
| SNRPB2 | 7 | Binding:7 |
| S100A8 | 6 | Binding:6 |
| SHMT2 | 6 | Binding:6 |
| ATXN2 | 5 | Binding:3, Functional:2 |
| RNF5 | 2 | Binding:2 |
| BRAP | 2 | Binding:2 |
| RHO | 1 | Binding:1 |
| RING1 | 1 | Binding:1 |
| RYBP | 1 | Binding:1 |
| S100A11 | 1 | Binding:1 |
| CCL22 | 1 | Binding:1 |
| SLC24A2 | 1 | Functional:1 |
| SPRR3 | 1 | Binding:1 |
Cohort enzymes (BRENDA EC)
| Symbol | EC numbers | Names |
|---|
| CFB | 3.4.21.47 | alternative-complement-pathway C3/C5 convertase |
| SHMT2 | 2.1.2.1 | glycine hydroxymethyltransferase |
| SMPD1 | 3.1.4.12 | sphingomyelin phosphodiesterase |
Cohort genes with high screening signal
≥100 ChEMBL assays — a studied-ness signal; see Therapeutics for approved-drug status.
| Symbol | ChEMBL assays |
|---|
| BCL6 | 209 |
| BCR | 486 |
| RORA | 115 |
| RORC | 758 |
| SLCO1B1 | 242 |
| BRD2 | 681 |
| SMARCA2 | 311 |
Pharmacogenomics
Cohort genes with a PharmGKB record: 75; with CPIC/DPWG dosing guidelines: 2.
Cohort genes with a CPIC/DPWG dosing guideline
| Symbol | CPIC guidelines |
|---|
| RYR1 | 1 |
| SLCO1B1 | 1 |
Chemical tractability of cohort targets
30 approved/phased compounds have measured bioactivity against a cohort gene (and aren’t yet in disease-level trials). This is a research / tractability signal, NOT a therapeutic recommendation — a bioactivity row often reflects off-target or screening binding (e.g. promiscuous kinase inhibitors against a cohort kinase), implying no disease mechanism.
| Compound | Max phase | Cohort target (bioactivity) |
|---|
| PONATINIB | 4 | BCR |
| DASATINIB ANHYDROUS | 4 | BCR |
| IMATINIB MESYLATE | 4 | BCR |
| INFIGRATINIB | 4 | BCR |
| NILOTINIB | 4 | BCR |
| BOSUTINIB | 4 | BCR |
| ASCIMINIB | 4 | BCR |
| DASATINIB | 4 | BCR |
| TIRBANIBULIN | 4 | BCR |
| IMATINIB | 4 | BCR |
| FEDRATINIB | 4 | BCR |
| TIVOZANIB | 4 | BCR |
| LENVATINIB | 4 | BCR |
| AXITINIB | 4 | BCR |
| IBRUTINIB | 4 | BCR |
| REGORAFENIB | 4 | BCR |
| CABOZANTINIB | 4 | BCR |
| VANDETANIB | 4 | BCR |
| TOVORAFENIB | 4 | BCR |
| NINTEDANIB | 4 | BCR |
| ERLOTINIB | 4 | BCR, SLCO1B1 |
| CRIZOTINIB | 4 | BCR |
| TRETINOIN | 4 | RORA, RORC |
| DIGOXIN | 4 | RORC, SLCO1B1 |
| ALITRETINOIN | 4 | RORC |
| GENTAMICIN SULFATE | 4 | RPL19, RPL41, RPL5, RPS26 |
| IPTACOPAN | 4 | CFB |
| APOMORPHINE HYDROCHLORIDE | 4 | RUNX1 |
| VENETOCLAX | 4 | BID |
| OXAPROZIN | 4 | SHMT2 |
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|
| A | Approved (phase 4 drug) | 15 | BCR, RORA, RORC, RPL19, RPL41, RPL5, CFB, RPS26, RUNX1, BID (+5 more) |
| B | Phased (≥1) drug, not yet approved | 8 | BCL6, S100A8, BRD2, SLC6A12, SLC6A13, SLC9A2, SMARCA2, SNRPB2 |
| C | Druggable family + PDB, no drug | 5 | RHO, RYR1, PMEL, SLC22A5, SLC7A10 |
| D | Druggable family + AlphaFold only, no drug | 2 | CXCR5, SLC22A4 |
| E | Difficult family or no structure, no drug | 45 | CARD11, RING1, RNF14, RNF5, SNORD21, SNORD48, SNORD52, SNORA66, RPL41P2, RUNX3 (+35 more) |
Undrugged target profiles
52 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
| Symbol | ChEMBL assays | Drugged partners (top 3) |
|---|
| S100A9 | 10 | S100A8 |
| SLC22A4 | 29 | RUNX1 |
| CARD11 | 0 | — |
| RHO | 1 | — |
| RING1 | 1 | — |
| RNF14 | 0 | — |
| RNF5 | 2 | — |
| SNORD21 | 0 | — |
| SNORD48 | 0 | — |
| SNORD52 | 0 | — |
| SNORA66 | 0 | — |
| RPL41P2 | 0 | — |
| RUNX3 | 0 | — |
| RYBP | 1 | — |
| RYR1 | 16 | — |
| S100A10 | 12 | — |
| S100A11 | 1 | — |
| S100A12 | 0 | — |
| SARDH | 0 | — |
| ATXN2 | 5 | — |
| CXCR5 | 33 | — |
| CCL20 | 0 | — |
| CCL22 | 1 | — |
| SEMG2 | 0 | — |
| SGCG | 0 | — |
| PMEL | 0 | — |
| SIM2 | 0 | — |
| SIPA1 | 0 | — |
| SKIC2 | 0 | — |
| SLC22A5 | 97 | — |
Clinical trials & evidence
Clinical trials
Clinical trials: 3,826.
Phase distribution (across all retrieved trials)
| Phase | Trials |
|---|
| PHASE3 | 490 |
| PHASE4 | 374 |
| PHASE2 | 185 |
| PHASE2/PHASE3 | 35 |
| PHASE1/PHASE2 | 16 |
Top trials by phase / activity
| NCT | Phase | Status | Title |
|---|
| NCT01225913 | PHASE4 | RECRUITING | Mechanism(s) of Airflow Limitation During Exacerbation of Asthma |
| NCT03105843 | PHASE4 | RECRUITING | Sensory-Mechanical Responses to Eucapneic Voluntary Hyperventilation and Mannitol |
| NCT03694158 | PHASE4 | ACTIVE_NOT_RECRUITING | Investigating Dupilumab’s Effect in Asthma by Genotype |
| NCT03889743 | PHASE4 | RECRUITING | Innovative Steroid Treatment to Reduce Asthma Development in Children After First-time Rhinovirus Induced Wheezing |
| NCT03953300 | PHASE4 | ACTIVE_NOT_RECRUITING | Benralizumab Airway Remodeling Study in Severe Eosinophilic Asthmatics |
| NCT04380038 | PHASE4 | RECRUITING | Viral Infection in Asthma (VIA) Study |
| NCT04565483 | PHASE4 | RECRUITING | Predictive Signature of Benralizumab Response |
| NCT04743791 | PHASE4 | RECRUITING | Measuring the Effect of Dupilumab Treatment on Mucociliary Clearance (MCC) in Subjects With Moderate to Severe Asthma |
| NCT04763447 | PHASE4 | RECRUITING | Short Treatment with Omalizumab for Severe Asthma |
| NCT05097287 | PHASE4 | ACTIVE_NOT_RECRUITING | Study Assessing the Long-term Effect of Dupilumab on Prevention of Lung Function Decline in Adult Patients With Uncontrolled Moderate to Severe Asthma |
| NCT05598814 | PHASE4 | ACTIVE_NOT_RECRUITING | Mepolizumab to CRSwNP Through 12 Months - Randomised to FESS and Non-FESS Within the First 2 Weeks |
| NCT05626777 | PHASE4 | ACTIVE_NOT_RECRUITING | Symptoms Control and adhErenCe Assessment During Treatment With MepolizUmab New pREfilled Devices |
| NCT06041386 | PHASE4 | ACTIVE_NOT_RECRUITING | REIMAGINE - Real World EvaluatIon of Mepolizumab in Severe Asthma achievinG on Treatment clinIcal remissioN, a prospEctive Study |
| NCT06152653 | PHASE4 | RECRUITING | The Effects of Positive Airway Pressure on the Mucolytic Effects of NAC (TEAM) |
| NCT06372496 | PHASE4 | ACTIVE_NOT_RECRUITING | Pragmatic Open - Label Randomized Clinical Trial of FF/UMEC/VI vs Non-ellipta Usual Care ICS-LABA for Adult Participants With Uncontrolled Asthma |
| NCT06422689 | PHASE4 | ACTIVE_NOT_RECRUITING | Combination Short-Acting BroNchodilator and Inhaled Corticosteroid Rescue Therapy on Health Outcomes in Routine Care |
| NCT06556264 | PHASE4 | NOT_YET_RECRUITING | Immunologic Impact of Dupilumab in Patients Suffering From Asthma and Chronic Rhinosinusitis With Polyps |
| NCT06572228 | PHASE4 | ACTIVE_NOT_RECRUITING | Efficacy of Dupilumab Added to Medium Dose Inhaled Corticosteroid/Long-acting Beta-agonist (ICS/LABA) in Comparison to ICS Dose Escalation to High Dose ICS/LABA in Adolescent and Adult Patients With Uncontrolled Asthma |
| NCT06705764 | PHASE4 | NOT_YET_RECRUITING | Tezepelumab in the Treatment of Emergency Room Asthma in Adults (TERAA) |
| NCT06818019 | PHASE4 | NOT_YET_RECRUITING | Withdrawal of Dupilumab in Severe Asthma |
| NCT06970080 | PHASE4 | RECRUITING | Therapeutic Relevance of Abnormal Airway Morphology in Asthma |
| NCT07052942 | PHASE4 | RECRUITING | Individualizing Treatment for Asthma in Primary Care (Full Study) |
| NCT07166939 | PHASE4 | RECRUITING | 45th Multicenter Airway Research Collaboration |
| NCT07228052 | PHASE4 | NOT_YET_RECRUITING | Giving Asthmatics Intramuscular Steroids for Preventing Return to the Emergency Department |
| NCT07343661 | PHASE4 | ENROLLING_BY_INVITATION | Beyond EOsinophils: proteoMICS to Identify Potential Biomarker of Organ Damage and Response to MEPOLIZUMAB in EGPA |
| NCT07426458 | PHASE4 | RECRUITING | Ventilation and Perfusion in Asthmatics |
| NCT00070707 | PHASE4 | COMPLETED | Nasonex Compared With Placebo in Participants With Seasonal Allergic Rhinitis (SAR) and Concomitant Asthma (P03280) |
| NCT00071552 | PHASE4 | TERMINATED | Efficacy of QVAR vs Flovent Diskus on Small Airways in Poorly Controlled Asthmatic Adolescents/Adult Patients |
| NCT00096954 | PHASE4 | COMPLETED | A Prospective, Randomized, Double-Blind Study of the Efficacy of Omalizumab (Xolair) in Atopic Asthmatics With Good Lung Capacity Who Remain Difficult to Treat (EXACT) |
| NCT00102765 | PHASE4 | COMPLETED | Study Of Asthma In Patients Of African Descent |
| NCT00102882 | PHASE4 | COMPLETED | Study Of Asthma And Genetics In Patients To Be Treated With Fluticasone Propionate/Salmeterol Or Salmeterol Xinafoate |
| NCT00124176 | PHASE4 | COMPLETED | Continuous Levalbuterol for Treatment of Status Asthmaticus in Children |
| NCT00133042 | PHASE4 | COMPLETED | The Effect of Omalizumab on Airway Responsiveness to Adenosine in Patients With Poorly Controlled Asthma |
| NCT00140881 | PHASE4 | COMPLETED | A Study to Determine the Effect of Montelukast Sodium as an Episode Modifier in the Treatment of Infrequent Episodic Asthma in Children (0476-165) |
| NCT00140946 | PHASE4 | COMPLETED | A Study to Assess the Effect of Montelukast Sodium With Concomitant Administration of Inhaled Budesonide in Asthmatic Patients (0476-075) |
| NCT00148408 | PHASE4 | COMPLETED | Trial of Asthma Patient Education (TAPE) |
| NCT00152984 | PHASE4 | COMPLETED | Efficacy and Safety of Tiotropium in Patients With COPD and Concomitant Diagnosis of Asthma |
| NCT00153075 | PHASE4 | COMPLETED | Flow Rate Effect Respimat Inhaler Versus a Metered Dose Inhaler Using Berodual in Patients With Chronic Obstructive Pulmonary Disease (COPD) |
| NCT00156819 | PHASE4 | COMPLETED | The Leukotriene Modifier Or Corticosteroid or Corticosteroid-Salmeterol Trial |
| NCT00157937 | PHASE4 | COMPLETED | A Study to Compare Effectiveness of Montelukast Sodium With Comparator in Mild to Moderate Persistent Asthmatics (0476-329) |
Drugs tested across these trials (top 30)
- Cohort genes: CARD11, BCL6, RHO, RING1, RNF14, RNF5, BCR, SNORD21, SNORD48, SNORD52, SNORA66, RORA, RORC, RPL19, RPL41, RPL5, CFB, RPS26, RUNX1, RUNX3, RYBP, RYR1, S100A10, S100A11, S100A12, S100A8, S100A9, BID, SARDH, ATXN2, CXCR5, CCL20, CCL22, SEMG2, SGCG, SHMT2, PMEL, SIM2, SIPA1, SKIC2, SLCO1A2, SLCO1B1, SLC22A4, SLC22A5, SLC24A2, BRAP, SLC34A1, BRD2, SLC6A12, SLC6A13, SLC7A10, SLC8A1, ZFP36L1, SLC9A2, SLC9A4, SMARCA2, SMARCC2, SMARCE1, SMPD1, SNRPB2, SOX1, SP2, SPRR1A, SPRR1B, SPRR2A, SPRR2B, SPRR2D, SPRR2E, SPRR2F, SPRR2G, SPRR3
- Drugs: Montelukast, Albuterol, Salmeterol, Fluticasone Propionate, Formoterol, Arformoterol, Budesonide, Omalizumab, Vilanterol, Ciclesonide, Beclomethasone Dipropionate, Fluticasone Furoate, Benralizumab, Mepolizumab, Dupilumab, Theophylline, Levosalbutamol, Mometasone Furoate, Tiotropium, Tezepelumab, Indacaterol, Terbutaline, Darifenacin, Azithromycin, Dexamethasone, Methacholine, Ipratropium Bromide, Prednisolone, Prednisone, Reslizumab