ATM-related cancer predisposition
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Summary
ATM-related cancer predisposition (MONDO:0700270) is a cancer caused by ATM (GenCC Definitive), with 2 cohort genes (1 CIViC-evidence somatic driver; 288 ClinVar predisposition records).
At a glance
- Classification: Cancer
- Causal gene: ATM (GenCC Definitive)
- Cohort genes: 2
- ClinVar variants: 288
Clinical features
No curated clinical features (Orphanet) for this disease.
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | ATM-related cancer predisposition |
| Mondo ID | MONDO:0700270 |
| GARD | 0026410 |
| Is cancer (heuristic) | yes |
Data availability: 288 ClinVar variants · 136 ClinGen variant curations · 1 GenCC gene-disease record.
Disease family
Classification path: disease › human disease › disease by etiologic mechanism › disease of genetic or genomic mechanism › hereditary disease › hereditary neoplastic syndrome › ATM-related cancer predisposition
Related subtypes (116): mosaic variegated aneuploidy syndrome, tuberous sclerosis, hereditary breast ovarian cancer syndrome, hereditary multiple osteochondromas, nevoid basal cell carcinoma syndrome, leukemia, chronic lymphocytic, susceptibility to, 2, blue rubber bleb nevus, cherubism, Beckwith-Wiedemann syndrome, multiple self-healing squamous epithelioma, erythroleukemia, familial, susceptibility to, goiter, multinodular 1, with or without Sertoli-Leydig cell tumors, hyperparathyroidism 2 with jaw tumors, Kaposi sarcoma, susceptibility to, hereditary leiomyomatosis and renal cell cancer, susceptibility to uveal melanoma, melanoma and neural system tumor syndrome, nasopharyngeal carcinoma, susceptibility to, 2, WAGR syndrome, neuroblastoma, susceptibility to, 1, Rothmund-Thomson syndrome, mismatch repair cancer syndrome 1, Wiskott-Aldrich syndrome, N syndrome, hereditary thrombocytopenia and hematologic cancer predisposition syndrome, prostate cancer/brain cancer susceptibility, Brooke-Spiegler syndrome, pancreatic cancer, susceptibility to, 1, Carney-Stratakis syndrome, nasopharyngeal carcinoma, susceptibility to, 1, ovarian cancer, susceptibility to, 1, colorectal cancer, susceptibility to, 1, lung cancer susceptibility 1, leukemia, chronic lymphocytic, susceptibility to, 1, Kostmann syndrome, colorectal cancer, susceptibility to, 2, colorectal cancer, susceptibility to, 3, colorectal cancer, susceptibility to, 5, colorectal cancer, susceptibility to, 6, colorectal cancer, susceptibility to, 7, leukemia, chronic lymphocytic, susceptibility to, 3, leukemia, chronic lymphocytic, susceptibility to, 4, leukemia, chronic lymphocytic, susceptibility to, 5, lung cancer susceptibility 3, colorectal cancer, susceptibility to, 8, colorectal cancer, susceptibility to, 9, colorectal cancer, susceptibility to, 10, colorectal cancer, susceptibility to, 11, lung cancer susceptibility 4, neuroblastoma, susceptibility to, 3, neuroblastoma, susceptibility to, 4, neuroblastoma, susceptibility to, 5, neuroblastoma, susceptibility to, 6, leukemia, acute lymphocytic, susceptibility to, 1, leukemia, acute lymphocytic, susceptibility to, 2, lung cancer susceptibility 5, BAP1-related tumor predisposition syndrome, familial cutaneous telangiectasia and oropharyngeal predisposition cancer syndrome, Maffucci syndrome, basal cell carcinoma, susceptibility to, 7, colorectal cancer, susceptibility to, 12, leukemia, acute lymphoblastic, susceptibility to, 3, cholangiocarcinoma, susceptibility to, progeroid features-hepatocellular carcinoma predisposition syndrome, neuroblastoma, susceptibility to, 7, DDX41-related hematologic malignancy predisposition syndrome, nasopharyngeal carcinoma, susceptibility to, 3, familial isolated hyperparathyroidism, intestinal polyposis syndrome, dyskeratosis congenita, familial rhabdoid tumor, multiple endocrine neoplasia, hereditary pheochromocytoma-paraganglioma, PTEN hamartoma tumor syndrome, familial multiple fibrofolliculoma, hereditary retinoblastoma, familial atypical multiple mole melanoma syndrome, hereditary nonpolyposis colon cancer, Li-Fraumeni syndrome, Cobb syndrome, neurofibromatosis, susceptibility to familial cutaneous melanoma, pancreatic cancer, susceptibility to, 5, leukemia, acute myeloid, susceptibility to, diffuse gastric and lobular breast cancer syndrome with or without cleft lip and/or palate, glioma susceptibility, hemangioma, capillary infantile, susceptibility to, CDH1-related diffuse gastric and lobular breast cancer syndrome, NTHL1-deficiency tumor predisposition syndrome, SAMD9-related spectrum and myeloid neoplasm risk, neuroblastoma, susceptibility to, 2, BARD1-related cancer predisposition, BRCA1-related cancer predisposition, BRCA2-related cancer predisposition, CHEK2-related cancer predisposition, PALB2-related cancer predisposition, RAD51C-related cancer predisposition, RAD51D-related cancer predisposition, Li-fraumeni-like syndrome, breast cancer, familial, susceptibility to, 1, breast cancer, familial, susceptibility to, 2, breast cancer, familial, susceptibility to, 3, colorectal cancer, susceptibility to, 4, colorectal cancer, susceptibility to, on chromosome 15, ovarian cancer, familial, susceptibility to, 1, ovarian cancer, familial, susceptibility to, 2, ovarian cancer, familial, susceptibility to, 3, inherited hematologic cancer-predisposing syndrome, mosaic neurofibromatosis/schwannomatosis, tumor predisposition syndrome 2, prostate cancer, hereditary, X-linked 3, follicular lymphoma, susceptibility to, GPR161-related medulloblastoma predisposition, SAMD9L-related spectrum and myeloid neoplasm risk, HAVCR2-related cancer predisposition, EGLN1-related erythrocytosis and pheochromocytoma/paraganglioma predisposition
Genetics & variants
GWAS landscape
No GWAS associations recorded — common-variant (GWAS) studies don’t cover this disease (typical for Mendelian / rare diseases). See the curated gene cohort and Mendelian overlap below.
Variant details and genetic-evidence tiers
ClinVar germline variants
288 retrieved; paginated sample, class counts are floors:
89 pathogenic, 66 uncertain significance, 40 conflicting classifications of pathogenicity, 27 likely pathogenic, 23 benign/likely benign, 22 pathogenic/likely pathogenic, 12 benign, 9 likely benign
| ClinVar | Variant (HGVS) | Gene | Classification | Review |
|---|---|---|---|---|
| 1676606 | Single allele | Pathogenic | reviewed by expert panel | |
| 127337 | NM_000051.4(ATM):c.1339C>T (p.Arg447Ter) | ATM | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 127340 | NM_000051.4(ATM):c.1564_1565del (p.Glu522fs) | ATM | Pathogenic | reviewed by expert panel |
| 127374 | NM_000051.4(ATM):c.3802del (p.Glu1267_Val1268insTer) | ATM | Pathogenic | reviewed by expert panel |
| 127403 | NM_000051.4(ATM):c.5228C>T (p.Thr1743Ile) | ATM | Pathogenic | reviewed by expert panel |
| 127405 | NM_000051.4(ATM):c.5290del (p.Leu1764fs) | ATM | Pathogenic | reviewed by expert panel |
| 127463 | NM_000051.4(ATM):c.8786+1G>A | ATM | Pathogenic | reviewed by expert panel |
| 1332151 | NM_000051.4(ATM):c.3662G>A (p.Trp1221Ter) | ATM | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 135780 | NM_000051.4(ATM):c.8266A>T (p.Lys2756Ter) | ATM | Pathogenic | reviewed by expert panel |
| 140818 | NM_000051.4(ATM):c.6997dup | ATM | Pathogenic | reviewed by expert panel |
| 140889 | NM_000051.4(ATM):c.1402_1403del (p.Lys468fs) | ATM | Pathogenic | reviewed by expert panel |
| 140897 | NM_000051.4(ATM):c.8565_8566delinsAA (p.Ser2855_Val2856delinsArgIle) | ATM | Pathogenic | reviewed by expert panel |
| 140907 | NM_000051.4(ATM):c.8473C>T (p.Gln2825Ter) | ATM | Pathogenic | reviewed by expert panel |
| 141037 | NM_000051.4(ATM):c.378del (p.Asp126fs) | ATM | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 141325 | NM_000051.4(ATM):c.2284_2285del (p.Leu762fs) | ATM | Pathogenic | reviewed by expert panel |
| 141404 | NM_000051.4(ATM):c.5908C>T (p.Gln1970Ter) | ATM | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 141474 | NM_000051.4(ATM):c.1355del (p.Thr452fs) | ATM | Pathogenic | reviewed by expert panel |
| 141647 | NM_000051.4(ATM):c.7517_7520del | ATM | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 141742 | NM_000051.4(ATM):c.790del (p.Tyr264fs) | ATM | Pathogenic | reviewed by expert panel |
| 141887 | NM_000051.4(ATM):c.1158del (p.Lys387fs) | ATM | Pathogenic | reviewed by expert panel |
| 142355 | NM_000051.4(ATM):c.6976-2A>C | ATM | Pathogenic | reviewed by expert panel |
| 142700 | NM_000051.4(ATM):c.8147T>C (p.Val2716Ala) | ATM | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 1713223 | NM_000051.4(ATM):c.6372C>G (p.Tyr2124Ter) | ATM | Pathogenic | reviewed by expert panel |
| 1733279 | NM_000051.4(ATM):c.3617T>A (p.Leu1206Ter) | ATM | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 181865 | NM_000051.4(ATM):c.8264_8268del (p.Tyr2755fs) | ATM | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 181874 | NM_000051.4(ATM):c.237del (p.Lys79fs) | ATM | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 181974 | NM_000051.4(ATM):c.6095G>A (p.Arg2032Lys) | ATM | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 185137 | NM_000051.4(ATM):c.3349C>T (p.Gln1117Ter) | ATM | Pathogenic | reviewed by expert panel |
| 185405 | NM_000051.4(ATM):c.2839-3_2839delinsGATACTA | ATM | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 186242 | NM_000051.4(ATM):c.8395_8404del (p.Phe2799fs) | ATM | Pathogenic | reviewed by expert panel |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 14 · Orphanet: 8 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
Somatic driver evidence (intOGen + CIViC, cohort fanout)
| Gene | intOGen role | Cancer types | CIViC |
|---|---|---|---|
| ATM | LoF | BLCA,BRCA,CCRCC,CHOL,CLLSLL,COAD,COADREAD,ESCA,HCC,LUAD,LUSC,MEL,NSCLC,PAAD,PANCREAS,PANET,PCM,PLMESO,PRAD,PROSTATE,STAD,UCEC,UTUC,WDTC | CIViC #69 |
GenCC gene–disease validity (cohort genes)
the Disease column is the GenCC-asserted condition — a cohort gene’s strongest validity may be for a related predisposition syndrome.
| Gene | Classification | Inheritance | Disease | Records |
|---|---|---|---|---|
| ATM | Definitive | Autosomal dominant | ATM-related cancer predisposition | 14 |
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|---|---|
| ATM | Orphanet:100 | Ataxia-telangiectasia |
| ATM | Orphanet:1331 | Familial prostate cancer |
| ATM | Orphanet:145 | Hereditary breast and/or ovarian cancer syndrome |
| ATM | Orphanet:227535 | Hereditary breast cancer |
| ATM | Orphanet:370109 | Ataxia-telangiectasia variant |
| ATM | Orphanet:440437 | Familial colorectal cancer Type X |
| ATM | Orphanet:52416 | Mantle cell lymphoma |
| ATM | Orphanet:67038 | B-cell chronic lymphocytic leukemia |
Cohort genes → proteins
2 cohort genes, 2 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|---|
| multi_evidence | 2 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|---|---|---|---|---|
| ATM | HGNC:795 | ENSG00000149311 | Q13315 | Serine-protein kinase ATM | gencc,clinvar |
| C11orf65 | HGNC:28519 | ENSG00000166323 | Q8NCR3 | Protein MFI | clinvar |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|---|---|
| ATM | Serine-protein kinase ATM | Serine/threonine protein kinase which activates checkpoint signaling upon double strand breaks (DSBs), apoptosis and genotoxic stresses such as ionizing ultraviolet A light (UVA), thereby acting as a DNA damage sensor. |
| C11orf65 | Protein MFI | Acts as an inhibitor of mitochondrial fission. |
Protein-family classification
Druggable: 1 · Difficult: 0 · Unknown: 1 · Druggable fraction: 0.5
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|---|---|---|
| Kinase | 1 | 13.9× | 0.142 |
| Other/Unknown | 1 | 0.9× | 0.805 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|---|---|---|---|
| ATM | Kinase | yes | 2.7.11.1 | PI3/4_kinase_cat_dom, PIK-rel_kinase_FAT, FATC_dom |
| C11orf65 | Other/Unknown | no |
Expression context
Cohort genes with no expression data: 0.
2 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 0 |
| broad (>20) | 2 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|---|
| calcaneal tendon | 1 |
| colonic epithelium | 1 |
| corpus callosum | 1 |
| left testis | 1 |
| right testis | 1 |
| sperm | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|---|---|---|---|
| ATM | 286 | ubiquitous | marker | calcaneal tendon, colonic epithelium, corpus callosum |
| C11orf65 | 163 | ubiquitous | marker | sperm, left testis, right testis |
Protein interactions among cohort
Intra-cohort edges: 0.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|---|
| ATM | 7,383 |
| C11orf65 | 312 |
Structural data
PDB: 1 · AlphaFold-only: 1 · No structure: 0
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|---|---|
| ATM | Q13315 | 14 |
AlphaFold-only cohort genes (top 30 by pLDDT)
| Symbol | UniProt | pLDDT |
|---|---|---|
| C11orf65 | Q8NCR3 | 74.69 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 61. Enrichment computed across 2 evidence-associated genes (1 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 1 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| Sensing of DNA Double Strand Breaks | 1 | 1903.3× | 0.007 | ATM |
| TP53 Regulates Transcription of Caspase Activators and Caspases | 1 | 951.7× | 0.007 | ATM |
| Pexophagy | 1 | 951.7× | 0.007 | ATM |
| Defective homologous recombination repair (HRR) due to PALB2 loss of function | 1 | 951.7× | 0.007 | ATM |
| Diseases of DNA Double-Strand Break Repair | 1 | 815.7× | 0.007 | ATM |
| Defective homologous recombination repair (HRR) due to BRCA2 loss of function | 1 | 815.7× | 0.007 | ATM |
| Stabilization of p53 | 1 | 761.3× | 0.007 | ATM |
| p53-Dependent G1 DNA Damage Response | 1 | 713.8× | 0.007 | ATM |
| p53-Dependent G1/S DNA damage checkpoint | 1 | 713.8× | 0.007 | ATM |
| G1/S DNA Damage Checkpoints | 1 | 671.8× | 0.007 | ATM |
| Resolution of D-Loop Structures | 1 | 634.4× | 0.007 | ATM |
| Diseases of DNA repair | 1 | 571.0× | 0.007 | ATM |
| TP53 Regulates Transcription of Cell Death Genes | 1 | 543.8× | 0.007 | ATM |
| TP53 Regulates Transcription of Genes Involved in Cytochrome C Release | 1 | 543.8× | 0.007 | ATM |
| Regulation of TP53 Activity through Methylation | 1 | 543.8× | 0.007 | ATM |
| Regulation of TP53 Expression and Degradation | 1 | 519.1× | 0.007 | ATM |
| DNA Double Strand Break Response | 1 | 475.8× | 0.007 | ATM |
| Impaired BRCA2 binding to PALB2 | 1 | 456.8× | 0.007 | ATM |
| Defective homologous recombination repair (HRR) due to BRCA1 loss of function | 1 | 423.0× | 0.007 | ATM |
| Defective HDR through Homologous Recombination Repair (HRR) due to PALB2 loss of BRCA1 binding function | 1 | 423.0× | 0.007 | ATM |
| Defective HDR through Homologous Recombination Repair (HRR) due to PALB2 loss of BRCA2/RAD51/RAD51C binding function | 1 | 423.0× | 0.007 | ATM |
| Cellular response to heat stress | 1 | 393.8× | 0.007 | ATM |
| Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA) | 1 | 393.8× | 0.007 | ATM |
| Homologous DNA Pairing and Strand Exchange | 1 | 380.7× | 0.007 | ATM |
| Homology Directed Repair | 1 | 308.6× | 0.007 | ATM |
| HDR through Homologous Recombination (HRR) or Single Strand Annealing (SSA) | 1 | 308.6× | 0.007 | ATM |
| Impaired BRCA2 binding to RAD51 | 1 | 308.6× | 0.007 | ATM |
| Resolution of D-loop Structures through Holliday Junction Intermediates | 1 | 300.5× | 0.007 | ATM |
| HDR through Single Strand Annealing (SSA) | 1 | 292.8× | 0.007 | ATM |
| Regulation of TP53 Degradation | 1 | 292.8× | 0.007 | ATM |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 2 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| establishment of RNA localization to telomere | 1 | 4213.0× | 0.005 | ATM |
| establishment of protein-containing complex localization to telomere | 1 | 4213.0× | 0.005 | ATM |
| positive regulation of telomerase catalytic core complex assembly | 1 | 4213.0× | 0.005 | ATM |
| pre-B cell allelic exclusion | 1 | 2808.7× | 0.005 | ATM |
| cellular response to nitrosative stress | 1 | 2808.7× | 0.005 | ATM |
| peptidyl-serine autophosphorylation | 1 | 1685.2× | 0.005 | ATM |
| negative regulation of mitochondrial fission | 1 | 1685.2× | 0.005 | C11orf65 |
| negative regulation of telomere capping | 1 | 1685.2× | 0.005 | ATM |
| regulation of telomere maintenance via telomerase | 1 | 1404.3× | 0.005 | ATM |
| obsolete negative regulation of protein targeting to mitochondrion | 1 | 1404.3× | 0.005 | C11orf65 |
| positive regulation of telomere maintenance via telomere lengthening | 1 | 1404.3× | 0.005 | ATM |
| lipoprotein catabolic process | 1 | 1203.7× | 0.005 | ATM |
| V(D)J recombination | 1 | 1053.2× | 0.005 | ATM |
| meiotic telomere clustering | 1 | 936.2× | 0.005 | ATM |
| female meiotic nuclear division | 1 | 842.6× | 0.005 | ATM |
| histone mRNA catabolic process | 1 | 842.6× | 0.005 | ATM |
| cellular response to X-ray | 1 | 842.6× | 0.005 | ATM |
| DNA double-strand break processing | 1 | 766.0× | 0.005 | ATM |
| regulation of autophagosome assembly | 1 | 561.7× | 0.006 | ATM |
| pexophagy | 1 | 526.6× | 0.006 | ATM |
| regulation of cellular response to heat | 1 | 526.6× | 0.006 | ATM |
| positive regulation of DNA damage response, signal transduction by p53 class mediator | 1 | 495.6× | 0.006 | ATM |
| replicative senescence | 1 | 495.6× | 0.006 | ATM |
| negative regulation of B cell proliferation | 1 | 468.1× | 0.006 | ATM |
| oocyte development | 1 | 468.1× | 0.006 | ATM |
| cellular response to stress | 1 | 421.3× | 0.006 | ATM |
| signal transduction in response to DNA damage | 1 | 401.2× | 0.006 | ATM |
| positive regulation of telomere maintenance via telomerase | 1 | 366.4× | 0.007 | ATM |
| cellular response to gamma radiation | 1 | 300.9× | 0.008 | ATM |
| mitotic spindle assembly checkpoint signaling | 1 | 280.9× | 0.008 | ATM |
Therapeutics
Drug target analysis
Approved (phase 4): 1 · Phase ≥3: 1 · Phased (≥1): 1 · Undrugged: 1
Druggability breadth: 1 of 2 evidence-associated genes (50%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Genes with an approved drug
The molecule shown is one approved compound that hits the gene — not necessarily a drug of choice or one indicated for this disease.
| Symbol | Example approved molecule |
|---|---|
| ATM | AMIODARONE HYDROCHLORIDE |
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|---|---|
| ATM | 35 | 4 |
| C11orf65 | 0 | 0 |
Drugs targeting cohort genes (top 30)
| Molecule | Max phase | Targets in cohort |
|---|---|---|
| AMIODARONE HYDROCHLORIDE | 4 | ATM |
| FURAZOLIDONE | 4 | ATM |
| ESTRADIOL ACETATE | 4 | ATM |
| NAFTIFINE HYDROCHLORIDE | 4 | ATM |
| METHYSERGIDE MALEATE | 4 | ATM |
| AMITRIPTYLINE HYDROCHLORIDE | 4 | ATM |
| XYLOMETAZOLINE HYDROCHLORIDE | 4 | ATM |
| FLUVOXAMINE MALEATE | 4 | ATM |
| ESTRADIOL VALERATE | 4 | ATM |
| PERMETHRIN | 4 | ATM |
| MITOTANE | 4 | ATM |
| TICLOPIDINE HYDROCHLORIDE | 4 | ATM |
| ENOXIMONE | 4 | ATM |
| METHYLENE BLUE ANHYDROUS | 4 | ATM |
| DITHIAZANINE IODIDE | 4 | ATM |
| ETHACRYNIC ACID | 4 | ATM |
| SECNIDAZOLE | 4 | ATM |
| MENADIONE | 4 | ATM |
| FENOFIBRATE | 4 | ATM |
| DIPYRIDAMOLE | 4 | ATM |
| DACTOLISIB | 3 | ATM |
| STREPTONIGRIN | 2 | ATM |
| CALCIMYCIN | 2 | ATM |
| ENPIROLINE | 2 | ATM |
| OXACEPROL | 2 | ATM |
| TOLONIUM CHLORIDE | 2 | ATM |
| ESTRADIOL BENZOATE | 2 | ATM |
| BERZOSERTIB | 2 | ATM |
| LARTESERTIB | 2 | ATM |
| ALTHIAZIDE | 2 | ATM |
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 1.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|---|---|
| ATM | 240 | Binding:233, Functional:5, ADMET:2 |
Cohort enzymes (BRENDA EC)
| Symbol | EC numbers | Names |
|---|---|---|
| ATM | 2.7.11.1 | non-specific serine/threonine protein kinase |
Cohort genes with high screening signal
≥100 ChEMBL assays — a studied-ness signal; see Therapeutics for approved-drug status.
| Symbol | ChEMBL assays |
|---|---|
| ATM | 240 |
Pharmacogenomics
Cohort genes with a PharmGKB record: 2; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Drug repurposing candidates
30 approved/phased drugs hit cohort targets but don’t yet appear in disease-level clinical trials. Target-inhibition rationale is strongest for cancer driver genes; a bioactivity hit is a screening signal, not a treatment claim.
| Compound | Max phase | Cohort target (bioactivity) |
|---|---|---|
| AMIODARONE HYDROCHLORIDE | 4 | ATM |
| FURAZOLIDONE | 4 | ATM |
| ESTRADIOL ACETATE | 4 | ATM |
| NAFTIFINE HYDROCHLORIDE | 4 | ATM |
| METHYSERGIDE MALEATE | 4 | ATM |
| AMITRIPTYLINE HYDROCHLORIDE | 4 | ATM |
| XYLOMETAZOLINE HYDROCHLORIDE | 4 | ATM |
| FLUVOXAMINE MALEATE | 4 | ATM |
| ESTRADIOL VALERATE | 4 | ATM |
| PERMETHRIN | 4 | ATM |
| MITOTANE | 4 | ATM |
| TICLOPIDINE HYDROCHLORIDE | 4 | ATM |
| ENOXIMONE | 4 | ATM |
| METHYLENE BLUE ANHYDROUS | 4 | ATM |
| DITHIAZANINE IODIDE | 4 | ATM |
| ETHACRYNIC ACID | 4 | ATM |
| SECNIDAZOLE | 4 | ATM |
| MENADIONE | 4 | ATM |
| FENOFIBRATE | 4 | ATM |
| DIPYRIDAMOLE | 4 | ATM |
| DACTOLISIB | 3 | ATM |
| STREPTONIGRIN | 2 | ATM |
| CALCIMYCIN | 2 | ATM |
| ENPIROLINE | 2 | ATM |
| OXACEPROL | 2 | ATM |
| TOLONIUM CHLORIDE | 2 | ATM |
| ESTRADIOL BENZOATE | 2 | ATM |
| BERZOSERTIB | 2 | ATM |
| LARTESERTIB | 2 | ATM |
| ALTHIAZIDE | 2 | ATM |
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|---|---|---|
| A | Approved (phase 4 drug) | 1 | ATM |
| B | Phased (≥1) drug, not yet approved | 0 | |
| C | Druggable family + PDB, no drug | 0 | |
| D | Druggable family + AlphaFold only, no drug | 0 | |
| E | Difficult family or no structure, no drug | 1 | C11orf65 |
Undrugged target profiles
1 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
| Symbol | ChEMBL assays | Drugged partners (top 3) |
|---|---|---|
| C11orf65 | 0 | — |
Clinical trials & evidence
Clinical trials
Clinical trials: 0.