Autoimmune lymphoproliferative syndrome
disease diseaseOn this page
Also known as ALPSALPS (autoimmune lymphoproliferative syndrome)autoimmune lymphoproliferative syndrome type 1, autosomal dominantCanale-Smith syndromeFAS deficiency
Summary
Autoimmune lymphoproliferative syndrome (MONDO:0017979) is a disease (an umbrella term covering 9 Mondo subtypes) caused by variants in FAS and FASLG, with 7 cohort genes and 6 clinical trials. The dominant Reactome pathway is FasL/ CD95L signaling (3 cohort genes). Top therapeutic interventions include sirolimus, valproic acid, and soquelitinib.
At a glance
- Prevalence: Unknown (Worldwide) [Orphanet-validated]
- Causal genes: FAS (GenCC Definitive), FASLG (GenCC Strong)
- Umbrella term: 9 Mondo subtypes
- Cohort genes: 7
- ClinVar variants: 2
- Phenotypes (HPO): 72
- Clinical trials: 6
Clinical features
Epidemiology
Prevalence records
1 prevalence record(s), Orphanet:
| Type | Class | Value | Geography | Validation |
|---|---|---|---|---|
| Cases/families | 500 | Worldwide | Validated |
Signs & symptoms
Clinical features (HPO)
72 HPO clinical features (Orphanet curated; top 50 by frequency):
| HPO ID | Term | Frequency |
|---|---|---|
| HP:0001744 | Splenomegaly | Very frequent (80-99%) |
| HP:0002716 | Lymphadenopathy | Very frequent (80-99%) |
| HP:0002730 | Chronic noninfectious lymphadenopathy | Very frequent (80-99%) |
| HP:0002960 | Autoimmunity | Very frequent (80-99%) |
| HP:0000978 | Bruising susceptibility | Frequent (30-79%) |
| HP:0001890 | Autoimmune hemolytic anemia | Frequent (30-79%) |
| HP:0001892 | Abnormal bleeding | Frequent (30-79%) |
| HP:0001904 | Neutropenia in presence of anti-neutropil antibodies | Frequent (30-79%) |
| HP:0001971 | Hypersplenism | Frequent (30-79%) |
| HP:0001973 | Autoimmune thrombocytopenia | Frequent (30-79%) |
| HP:0002240 | Hepatomegaly | Frequent (30-79%) |
| HP:0002851 | Elevated proportion of CD4-negative, CD8-negative, alpha-beta regulatory T cells | Frequent (30-79%) |
| HP:0003237 | Increased circulating IgG level | Frequent (30-79%) |
| HP:0005404 | Increased B cell count | Frequent (30-79%) |
| HP:0010702 | Increased circulating antibody level | Frequent (30-79%) |
| HP:0030886 | Abnormal lymphocyte apoptosis | Frequent (30-79%) |
| HP:0033199 | Increased circulating interleukin 10 concentration | Frequent (30-79%) |
| HP:0011117 | Abnormal circulating interleukin concentration | Frequent (30-79%) |
| HP:0000099 | Glomerulonephritis | Occasional (5-29%) |
| HP:0001025 | Urticaria | Occasional (5-29%) |
| HP:0001880 | Eosinophilia | Occasional (5-29%) |
| HP:0001888 | Lymphopenia | Occasional (5-29%) |
| HP:0001923 | Reticulocytosis | Occasional (5-29%) |
| HP:0002633 | Vasculitis | Occasional (5-29%) |
| HP:0002848 | Specific anti-polysaccharide antibody deficiency | Occasional (5-29%) |
| HP:0002850 | Decreased circulating total IgM | Occasional (5-29%) |
| HP:0002923 | Rheumatoid factor positive | Occasional (5-29%) |
| HP:0003212 | Increased circulating IgE level | Occasional (5-29%) |
| HP:0003261 | Increased circulating IgA level | Occasional (5-29%) |
| HP:0003453 | Antineutrophil antibody positivity | Occasional (5-29%) |
| HP:0003493 | Antinuclear antibody positivity | Occasional (5-29%) |
| HP:0003613 | Antiphospholipid antibody positivity | Occasional (5-29%) |
| HP:0004315 | Decreased circulating IgG level | Occasional (5-29%) |
| HP:0004844 | Coombs-positive hemolytic anemia | Occasional (5-29%) |
| HP:0012115 | Hepatitis | Occasional (5-29%) |
| HP:0012189 | Hodgkin lymphoma | Occasional (5-29%) |
| HP:0012190 | T-cell lymphoma | Occasional (5-29%) |
| HP:0012191 | B-cell lymphoma | Occasional (5-29%) |
| HP:0012539 | Non-Hodgkin lymphoma | Occasional (5-29%) |
| HP:0030080 | Burkitt lymphoma | Occasional (5-29%) |
| HP:0031392 | Abnormal proportion of CD4 T cells | Occasional (5-29%) |
| HP:0031393 | Abnormal proportion of CD8 T cells | Occasional (5-29%) |
| HP:0034447 | Increased circulating interleukin 18 concentration | Occasional (5-29%) |
| HP:0040126 | Abnormal vitamin B12 level | Occasional (5-29%) |
| HP:0100646 | Thyroiditis | Occasional (5-29%) |
| HP:0100827 | Lymphocytosis | Occasional (5-29%) |
| HP:6000016 | Elevated circulating vitamin B12 concentration | Occasional (5-29%) |
| HP:6000017 | Elevated circulating soluble FASL concentration | Occasional (5-29%) |
| HP:0032218 | Decreased proportion of CD4-positive T cells | Occasional (5-29%) |
| HP:0000083 | Renal insufficiency | Very rare (<1-4%) |
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | autoimmune lymphoproliferative syndrome |
| Mondo ID | MONDO:0017979 |
| MeSH | D056735 |
| Orphanet | 3261 |
| DOID | DOID:6688 |
| ICD-10-CM | D89.82 |
| ICD-11 | 1072688797 |
| NCIT | C37864 |
| GARD | 0008686 |
| MedDRA | 10069521 |
| Is cancer (heuristic) | no |
Also known as: ALPS · ALPS (autoimmune lymphoproliferative syndrome) · autoimmune lymphoproliferative syndrome type 1, autosomal dominant · Canale-Smith syndrome · FAS deficiency
Data availability: 2 ClinVar variants · 9 GenCC gene-disease records.
Disease family
An umbrella term covering 9 Mondo subtypes.
Classification path: disease › human disease › disease by body system or component › immune system disorder › hypersensitivity reaction disease › type IV hypersensitivity disease › autoimmune lymphoproliferative syndrome
Related subtypes (2): cryoglobulinemia, serum sickness
Subtypes (9): autoimmune lymphoproliferative syndrome type 1, autoimmune lymphoproliferative syndrome type 2A, autoimmune lymphoproliferative syndrome type 2B, autoimmune lymphoproliferative syndrome type 4, autoimmune lymphoproliferative syndrome due to CTLA4 haploinsufficiency, Castleman-Kojima disease, FAS-related autoimmune lymphoproliferative immune disorder, type 3 autoimmune lymphoproliferative syndrome, autoimmune lymphoproliferative syndrome, type III caused by mutation in PRKCD
Genetics & variants
GWAS landscape
No GWAS associations recorded — common-variant (GWAS) studies don’t cover this disease (typical for Mendelian / rare diseases). See the curated gene cohort and Mendelian overlap below.
Variant details and genetic-evidence tiers
ClinVar germline variants
2 retrieved; paginated sample, class counts are floors:
2 pathogenic
| ClinVar | Variant (HGVS) | Gene | Classification | Review |
|---|---|---|---|---|
| 3572951 | NC_000010.10:g.90533969_90911342del | ACTA2 | Pathogenic | criteria provided, single submitter |
| 3376841 | NM_000043.6(FAS):c.381C>A (p.Cys127Ter) | FAS | Pathogenic | criteria provided, single submitter |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 32 · Orphanet: 10 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
GenCC gene–disease validity (cohort genes)
the Disease column is the GenCC-asserted condition — a cohort gene’s strongest validity may be for a related predisposition syndrome.
| Gene | Classification | Inheritance | Disease | Records |
|---|---|---|---|---|
| FAS | Definitive | Autosomal dominant | autoimmune lymphoproliferative syndrome type 1 | 7 |
| FASN | Definitive | Autosomal dominant | autoimmune lymphoproliferative syndrome type 1 | 8 |
| CASP10 | Strong | Autosomal dominant | autoimmune lymphoproliferative syndrome type 2A | 3 |
| FASLG | Strong | Autosomal recessive | autoimmune lymphoproliferative syndrome type 1 | 6 |
| PRKCD | Strong | Autosomal recessive | autoimmune lymphoproliferative syndrome, type III caused by mutation in PRKCD | 5 |
| RASGRP1 | Supportive | Autosomal dominant | autoimmune lymphoproliferative syndrome | 3 |
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|---|---|
| FAS | Orphanet:117 | Behçet disease |
| FAS | Orphanet:3261 | Autoimmune lymphoproliferative syndrome |
| FAS | Orphanet:3437 | Vogt-Koyanagi-Harada disease |
| FASLG | Orphanet:3261 | Autoimmune lymphoproliferative syndrome |
| CASP10 | Orphanet:3261 | Autoimmune lymphoproliferative syndrome |
| PRKCD | Orphanet:664711 | EBV-induced lymphoproliferative disease due to PRKCD deficiency |
| RASGRP1 | Orphanet:664699 | EBV-induced lymphoproliferative disease due to RASGRP1 deficiency |
| ACTA2 | Orphanet:2573 | Moyamoya disease |
| ACTA2 | Orphanet:404463 | Multisystemic smooth muscle dysfunction syndrome |
| ACTA2 | Orphanet:91387 | Familial thoracic aortic aneurysm and aortic dissection |
Cohort genes → proteins
7 cohort genes, 7 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|---|
| multi_evidence | 7 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|---|---|---|---|---|
| FAS | HGNC:11920 | ENSG00000026103 | P25445 | Tumor necrosis factor receptor superfamily member 6 | gencc,clinvar |
| FASN | HGNC:3594 | ENSG00000169710 | P49327 | Fatty acid synthase | gencc,clinvar |
| FASLG | HGNC:11936 | ENSG00000117560 | P48023 | Tumor necrosis factor ligand superfamily member 6 | gencc |
| CASP10 | HGNC:1500 | ENSG00000003400 | Q92851 | Caspase-10 | gencc |
| PRKCD | HGNC:9399 | ENSG00000163932 | Q05655 | Protein kinase C delta type | gencc |
| RASGRP1 | HGNC:9878 | ENSG00000172575 | O95267 | RAS guanyl-releasing protein 1 | gencc |
| ACTA2 | HGNC:130 | ENSG00000107796 | P62736 | Actin, aortic smooth muscle | clinvar |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|---|---|
| FAS | Tumor necrosis factor receptor superfamily member 6 | Receptor for TNFSF6/FASLG. |
| FASN | Fatty acid synthase | Fatty acid synthetase is a multifunctional enzyme that catalyzes the de novo biosynthesis of long-chain saturated fatty acids starting from acetyl-CoA and malonyl-CoA in the presence of NADPH. |
| FASLG | Tumor necrosis factor ligand superfamily member 6 | Cytokine that binds to TNFRSF6/FAS, a receptor that transduces the apoptotic signal into cells. |
| CASP10 | Caspase-10 | Involved in the activation cascade of caspases responsible for apoptosis execution. |
| PRKCD | Protein kinase C delta type | Calcium-independent, phospholipid- and diacylglycerol (DAG)-dependent serine/threonine-protein kinase that plays contrasting roles in cell death and cell survival by functioning as a pro-apoptotic protein during DNA damage-induced apoptosi… |
| RASGRP1 | RAS guanyl-releasing protein 1 | Functions as a calcium- and diacylglycerol (DAG)-regulated nucleotide exchange factor specifically activating Ras through the exchange of bound GDP for GTP. |
| ACTA2 | Actin, aortic smooth muscle | Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. |
Protein-family classification
Druggable: 3 · Difficult: 0 · Unknown: 4 · Druggable fraction: 0.43
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|---|---|---|
| Enzyme (other) | 2 | 3.4× | 0.330 |
| Kinase | 1 | 4.0× | 0.340 |
| Other/Unknown | 4 | 1.0× | 0.626 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|---|---|---|---|
| FAS | Other/Unknown | no | Death_dom, TNFR/NGFR_Cys_rich_reg, Fas_rcpt | |
| FASN | Enzyme (other) | yes | 2.3.1.39 | Thioesterase, Ac_transferase_dom_sf, Ppantetheine_attach_site |
| FASLG | Other/Unknown | no | TNF_dom, TNF, Tumour_necrosis_fac-like_dom | |
| CASP10 | Enzyme (other) | yes | 3.4.22.63 | Pept_C14_p20, DED_dom, Pept_C14_p10 |
| PRKCD | Kinase | yes | 2.7.11.13 | C2_dom, Prot_kinase_dom, AGC-kinase_C |
| RASGRP1 | Other/Unknown | no | Ras-like_Gua-exchang_fac_N, RASGEF_cat_dom, EF_hand_dom | |
| ACTA2 | Other/Unknown | no | Actin, Actin_CS, Actin/actin-like_CS |
Expression context
Cohort genes with no expression data: 0.
7 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 0 |
| broad (>20) | 7 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|---|
| granulocyte | 2 |
| monocyte | 2 |
| left ovary | 1 |
| rectum | 1 |
| right ovary | 1 |
| endometrium epithelium | 1 |
| right hemisphere of cerebellum | 1 |
| skin of abdomen | 1 |
| blood | 1 |
| lymph node | 1 |
| colonic epithelium | 1 |
| leukocyte | 1 |
| mononuclear cell | 1 |
| Brodmann (1909) area 23 | 1 |
| cerebellar vermis | 1 |
| pons | 1 |
| blood vessel layer | 1 |
| cauda epididymis | 1 |
| saphenous vein | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|---|---|---|---|
| FAS | 280 | ubiquitous | marker | rectum, left ovary, right ovary |
| FASN | 273 | ubiquitous | marker | right hemisphere of cerebellum, endometrium epithelium, skin of abdomen |
| FASLG | 118 | tissue_specific | marker | granulocyte, blood, lymph node |
| CASP10 | 206 | ubiquitous | marker | colonic epithelium, granulocyte, monocyte |
| PRKCD | 229 | ubiquitous | marker | monocyte, mononuclear cell, leukocyte |
| RASGRP1 | 248 | broad | marker | pons, cerebellar vermis, Brodmann (1909) area 23 |
| ACTA2 | 289 | ubiquitous | marker | cauda epididymis, blood vessel layer, saphenous vein |
Protein interactions among cohort
Intra-cohort edges: 3.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|---|
| FASN | 6,551 |
| FASLG | 4,373 |
| FAS | 3,314 |
| PRKCD | 3,286 |
| RASGRP1 | 1,939 |
| CASP10 | 1,242 |
| ACTA2 | 774 |
Intra-cohort edges
| A | B | Sources |
|---|---|---|
| CASP10 | FAS | intact, string_interaction |
| CASP10 | FASLG | biogrid_interaction, string_interaction |
| FAS | FASLG | intact, string_interaction |
Structural data
PDB: 5 · AlphaFold-only: 2 · No structure: 0
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|---|---|
| FASN | P49327 | 34 |
| FAS | P25445 | 7 |
| FASLG | P48023 | 3 |
| PRKCD | Q05655 | 2 |
| RASGRP1 | O95267 | 2 |
AlphaFold-only cohort genes (top 30 by pLDDT)
| Symbol | UniProt | pLDDT |
|---|---|---|
| ACTA2 | P62736 | 95.43 |
| CASP10 | Q92851 | 69.54 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 93. Enrichment computed across 7 evidence-associated genes (7 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 7 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| FasL/ CD95L signaling | 3 | 978.9× | 1e-07 | FAS, FASLG, CASP10 |
| Regulation by c-FLIP | 2 | 296.6× | 4e-04 | FAS, FASLG |
| CASP8 activity is inhibited | 2 | 296.6× | 4e-04 | FAS, FASLG |
| Dimerization of procaspase-8 | 2 | 296.6× | 4e-04 | FAS, FASLG |
| Caspase activation via Death Receptors in the presence of ligand | 2 | 217.5× | 6e-04 | FAS, FASLG |
| Effects of PIP2 hydrolysis | 2 | 130.5× | 0.001 | PRKCD, RASGRP1 |
| RIPK1-mediated regulated necrosis | 2 | 130.5× | 0.001 | FAS, FASLG |
| Activation of RAS in B cells | 1 | 326.3× | 0.036 | RASGRP1 |
| TRAIL signaling | 1 | 203.9× | 0.043 | CASP10 |
| ChREBP activates metabolic gene expression | 1 | 181.3× | 0.043 | FASN |
| HuR (ELAVL1) binds and stabilizes mRNA | 1 | 181.3× | 0.043 | PRKCD |
| NR1H2 & NR1H3 regulate gene expression linked to lipogenesis | 1 | 163.1× | 0.043 | FASN |
| TP53 Regulates Transcription of Caspase Activators and Caspases | 1 | 135.9× | 0.043 | CASP10 |
| TP53 Regulates Transcription of Death Receptors and Ligands | 1 | 135.9× | 0.043 | FAS |
| Regulation of CDH1 Function | 1 | 135.9× | 0.043 | ACTA2 |
| NF-kB activation through FADD/RIP-1 pathway mediated by caspase-8 and -10 | 1 | 125.5× | 0.043 | CASP10 |
| Vitamin B5 (pantothenate) metabolism | 1 | 108.8× | 0.043 | FASN |
| Regulation of mRNA stability by proteins that bind AU-rich elements | 1 | 108.8× | 0.043 | PRKCD |
| Rap1 signalling | 1 | 102.0× | 0.043 | RASGRP1 |
| FOXO-mediated transcription of cell death genes | 1 | 102.0× | 0.043 | FASLG |
| VEGFR2 mediated cell proliferation | 1 | 81.6× | 0.043 | PRKCD |
| NOTCH4 Intracellular Domain Regulates Transcription | 1 | 81.6× | 0.043 | ACTA2 |
| TP53 Regulates Transcription of Cell Death Genes | 1 | 77.7× | 0.043 | CASP10 |
| Developmental Lineage of Mammary Gland Myoepithelial Cells | 1 | 77.7× | 0.043 | ACTA2 |
| Deregulated CDK5 triggers multiple neurodegenerative pathways in Alzheimer’s disease models | 1 | 74.2× | 0.043 | FASLG |
| Signaling by NOTCH4 | 1 | 70.9× | 0.043 | ACTA2 |
| Apoptotic cleavage of cellular proteins | 1 | 68.0× | 0.043 | PRKCD |
| SHC1 events in ERBB2 signaling | 1 | 68.0× | 0.043 | PRKCD |
| Apoptotic execution phase | 1 | 68.0× | 0.043 | PRKCD |
| Role of phospholipids in phagocytosis | 1 | 65.3× | 0.043 | PRKCD |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 7 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| necroptotic signaling pathway | 2 | 601.9× | 5e-04 | FAS, FASLG |
| positive regulation of apoptotic signaling pathway | 2 | 166.0× | 0.003 | FAS, PRKCD |
| apoptotic process | 4 | 16.4× | 0.003 | FAS, FASLG, CASP10, PRKCD |
| B cell proliferation | 2 | 137.6× | 0.003 | PRKCD, RASGRP1 |
| extrinsic apoptotic signaling pathway via death domain receptors | 2 | 114.6× | 0.003 | FAS, FASLG |
| extrinsic apoptotic signaling pathway | 2 | 87.5× | 0.005 | FAS, FASLG |
| positive regulation of hepatic stellate cell contraction | 1 | 2407.4× | 0.005 | ACTA2 |
| positive regulation of phospholipid scramblase activity | 1 | 2407.4× | 0.005 | PRKCD |
| positive regulation of phosphatidylserine exposure on apoptotic cell surface | 1 | 2407.4× | 0.005 | FASLG |
| positive regulation of glucosylceramide catabolic process | 1 | 2407.4× | 0.005 | PRKCD |
| positive regulation of neuron apoptotic process | 2 | 77.7× | 0.005 | FASLG, CASP10 |
| signal transduction | 4 | 9.2× | 0.005 | FAS, FASLG, PRKCD, RASGRP1 |
| inflammatory cell apoptotic process | 1 | 1203.7× | 0.007 | FASLG |
| positive regulation of hepatic stellate cell migration | 1 | 1203.7× | 0.007 | ACTA2 |
| release of sequestered calcium ion into cytosol by endoplasmic reticulum | 1 | 1203.7× | 0.007 | FASLG |
| positive regulation of sphingomyelin catabolic process | 1 | 1203.7× | 0.007 | PRKCD |
| termination of signal transduction | 1 | 802.5× | 0.007 | PRKCD |
| secretory granule localization | 1 | 802.5× | 0.007 | RASGRP1 |
| Fas signaling pathway | 1 | 802.5× | 0.007 | FAS |
| retinal cell programmed cell death | 1 | 802.5× | 0.007 | FASLG |
| juxtaglomerular apparatus development | 1 | 802.5× | 0.007 | ACTA2 |
| regulation of ceramide biosynthetic process | 1 | 802.5× | 0.007 | PRKCD |
| protein kinase C signaling | 1 | 601.9× | 0.009 | PRKCD |
| glomerular mesangial cell development | 1 | 601.9× | 0.009 | ACTA2 |
| vascular associated smooth muscle contraction | 1 | 481.5× | 0.009 | ACTA2 |
| negative regulation of filopodium assembly | 1 | 481.5× | 0.009 | PRKCD |
| cellular response to hyperoxia | 1 | 481.5× | 0.009 | FAS |
| mesenchyme migration | 1 | 481.5× | 0.009 | ACTA2 |
| phospholipase C/protein kinase C signal transduction | 1 | 401.2× | 0.011 | PRKCD |
| positive regulation of hepatic stellate cell activation | 1 | 401.2× | 0.011 | ACTA2 |
Therapeutics
Drug target analysis
Approved (phase 4): 2 · Phase ≥3: 2 · Phased (≥1): 2 · Undrugged: 5
Druggability breadth: 6 of 7 evidence-associated genes (86%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Genes with an approved drug
The molecule shown is one approved compound that hits the gene — not necessarily a drug of choice or one indicated for this disease.
| Symbol | Example approved molecule |
|---|---|
| FASN | RABEPRAZOLE |
| PRKCD | INGENOL MEBUTATE |
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|---|---|
| PRKCD | 49 | 4 |
| FASN | 8 | 4 |
| FAS | 0 | 0 |
| FASLG | 0 | 0 |
| CASP10 | 0 | 0 |
| RASGRP1 | 0 | 0 |
| ACTA2 | 0 | 0 |
Drugs targeting cohort genes (top 30)
| Molecule | Max phase | Targets in cohort |
|---|---|---|
| RABEPRAZOLE | 4 | FASN |
| PANTOPRAZOLE | 4 | FASN |
| OMEPRAZOLE | 4 | FASN |
| ORLISTAT | 4 | FASN |
| LANSOPRAZOLE | 4 | FASN |
| INGENOL MEBUTATE | 4 | PRKCD |
| MIDOSTAURIN | 4 | PRKCD |
| TAMOXIFEN | 4 | PRKCD |
| TOFACITINIB CITRATE | 4 | PRKCD |
| BARICITINIB | 4 | PRKCD |
| TOFACITINIB | 4 | PRKCD |
| CAPIVASERTIB | 4 | PRKCD |
| BOSUTINIB | 4 | PRKCD |
| ABEMACICLIB | 4 | PRKCD |
| EPIGALOCATECHIN GALLATE | 3 | FASN |
| SURAMIN | 3 | PRKCD |
| FASUDIL | 3 | PRKCD |
| ALVOCIDIB | 3 | PRKCD |
| CURCUMIN | 3 | PRKCD |
| CRENOLANIB | 3 | PRKCD |
| ENZASTAURIN | 3 | PRKCD |
| RIPASUDIL | 3 | PRKCD |
| DOVITINIB | 3 | PRKCD |
| LESTAURTINIB | 3 | PRKCD |
| RUBOXISTAURIN | 3 | PRKCD |
| LUTEOLIN | 2 | FASN |
| DENIFANSTAT | 2 | FASN |
| PHORBOL MYRISTATE ACETATE | 2 | PRKCD |
| EDELFOSINE | 2 | PRKCD |
| UPROSERTIB | 2 | PRKCD |
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 3.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|---|---|
| PRKCD | 804 | Binding:790, Functional:14 |
| FASN | 142 | Binding:136, Functional:6 |
| CASP10 | 22 | Binding:21, Functional:1 |
| FAS | 8 | Binding:8 |
| RASGRP1 | 8 | Binding:8 |
| FASLG | 2 | Binding:2 |
Cohort enzymes (BRENDA EC)
| Symbol | EC numbers | Names |
|---|---|---|
| FASN | 2.3.1.39, 2.3.1.85 | [acyl-carrier-protein] S-malonyltransferase, fatty-acid synthase system |
| CASP10 | 3.4.22.63 | caspase-10 |
| PRKCD | 2.7.11.13 | protein kinase C |
Cohort genes with high screening signal
≥100 ChEMBL assays — a studied-ness signal; see Therapeutics for approved-drug status.
| Symbol | ChEMBL assays |
|---|---|
| FASN | 142 |
| PRKCD | 804 |
Pharmacogenomics
Cohort genes with a PharmGKB record: 7; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Chemical tractability of cohort targets
30 approved/phased compounds have measured bioactivity against a cohort gene (and aren’t yet in disease-level trials). This is a research / tractability signal, NOT a therapeutic recommendation — a bioactivity row often reflects off-target or screening binding (e.g. promiscuous kinase inhibitors against a cohort kinase), implying no disease mechanism.
| Compound | Max phase | Cohort target (bioactivity) |
|---|---|---|
| RABEPRAZOLE | 4 | FASN |
| PANTOPRAZOLE | 4 | FASN |
| OMEPRAZOLE | 4 | FASN |
| ORLISTAT | 4 | FASN |
| LANSOPRAZOLE | 4 | FASN |
| INGENOL MEBUTATE | 4 | PRKCD |
| MIDOSTAURIN | 4 | PRKCD |
| TAMOXIFEN | 4 | PRKCD |
| TOFACITINIB CITRATE | 4 | PRKCD |
| BARICITINIB | 4 | PRKCD |
| TOFACITINIB | 4 | PRKCD |
| CAPIVASERTIB | 4 | PRKCD |
| BOSUTINIB | 4 | PRKCD |
| ABEMACICLIB | 4 | PRKCD |
| EPIGALOCATECHIN GALLATE | 3 | FASN |
| SURAMIN | 3 | PRKCD |
| FASUDIL | 3 | PRKCD |
| ALVOCIDIB | 3 | PRKCD |
| CURCUMIN | 3 | PRKCD |
| CRENOLANIB | 3 | PRKCD |
| ENZASTAURIN | 3 | PRKCD |
| RIPASUDIL | 3 | PRKCD |
| DOVITINIB | 3 | PRKCD |
| LESTAURTINIB | 3 | PRKCD |
| RUBOXISTAURIN | 3 | PRKCD |
| LUTEOLIN | 2 | FASN |
| DENIFANSTAT | 2 | FASN |
| PHORBOL MYRISTATE ACETATE | 2 | PRKCD |
| EDELFOSINE | 2 | PRKCD |
| UPROSERTIB | 2 | PRKCD |
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|---|---|---|
| A | Approved (phase 4 drug) | 2 | FASN, PRKCD |
| B | Phased (≥1) drug, not yet approved | 0 | |
| C | Druggable family + PDB, no drug | 0 | |
| D | Druggable family + AlphaFold only, no drug | 1 | CASP10 |
| E | Difficult family or no structure, no drug | 4 | FAS, FASLG, RASGRP1, ACTA2 |
Undrugged target profiles
5 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
| Symbol | ChEMBL assays | Drugged partners (top 3) |
|---|---|---|
| FAS | 8 | — |
| FASLG | 2 | — |
| CASP10 | 22 | — |
| RASGRP1 | 8 | — |
| ACTA2 | 0 | — |
Clinical trials & evidence
Clinical trials
Clinical trials: 6.
Phase distribution (across all retrieved trials)
| Phase | Trials |
|---|---|
| PHASE1/PHASE2 | 2 |
| PHASE2 | 2 |
| Not specified | 2 |
Top trials by phase / activity
| NCT | Phase | Status | Title |
|---|---|---|---|
| NCT01821781 | PHASE2 | ACTIVE_NOT_RECRUITING | Immune Disorder HSCT Protocol |
| NCT06730126 | PHASE2 | RECRUITING | Study of the ITK Inhibitor Soquelitinib to Reduce Lymphoproliferation and Improve Cytopenias in Autoimmune Lymphoproliferative Syndrome (ALPS)-FAS Patients |
| NCT00392951 | PHASE1/PHASE2 | COMPLETED | Sirolimus for Autoimmune Disease of Blood Cells |
| NCT00605657 | PHASE1/PHASE2 | COMPLETED | Valproic Acid (Depakote[Registered Trademark]) to Treat Autoimmune Lymphoproliferative Syndrome (ALPS) |
| NCT04902807 | Not specified | RECRUITING | Conception of a Diagnosis, Prognosis and Therapeutic Decision Tool for Patients With Autoimmunity and Inflammation |
| NCT01672918 | Not specified | WITHDRAWN | Fluorodeoxyglucose Imaging Studies to Detect Lymphoma |
Drugs tested across these trials (top 30)
| Molecule | Max phase | Trials referencing |
|---|---|---|
| SIROLIMUS | 4 | 1 |
| VALPROIC ACID | 4 | 1 |
| SOQUELITINIB | 2 | 1 |