Autosomal agammaglobulinemia
diseaseOn this page
Also known as agammaglobulinemia, non-Bruton typeAGM
Summary
Autosomal agammaglobulinemia (MONDO:0011096) is a disease (an umbrella term covering 8 Mondo subtypes) with 9 cohort genes. The dominant Reactome pathway is Antigen activates B Cell Receptor (BCR) leading to generation of second messengers (5 cohort genes).
At a glance
- Prevalence: (Worldwide) [Orphanet-validated]
- Umbrella term: 8 Mondo subtypes
- Cohort genes: 9
- Phenotypes (HPO): 29
Clinical features
Epidemiology
Prevalence records
2 prevalence record(s), Orphanet:
| Type | Class | Value | Geography | Validation |
|---|---|---|---|---|
| Cases/families | 100 | Worldwide | Validated | |
| Point prevalence | <1 / 1 000 000 | Europe | Not yet validated |
Signs & symptoms
Clinical features (HPO)
29 HPO clinical features (Orphanet curated; top 29 by frequency):
| HPO ID | Term | Frequency |
|---|---|---|
| HP:0000246 | Sinusitis | Very frequent (80-99%) |
| HP:0000389 | Chronic otitis media | Very frequent (80-99%) |
| HP:0000509 | Conjunctivitis | Very frequent (80-99%) |
| HP:0000988 | Skin rash | Very frequent (80-99%) |
| HP:0001581 | Recurrent skin infections | Very frequent (80-99%) |
| HP:0001945 | Fever | Very frequent (80-99%) |
| HP:0002014 | Diarrhea | Very frequent (80-99%) |
| HP:0002205 | Recurrent respiratory infections | Very frequent (80-99%) |
| HP:0002719 | Recurrent infections | Very frequent (80-99%) |
| HP:0002721 | Immunodeficiency | Very frequent (80-99%) |
| HP:0004432 | Agammaglobulinemia | Very frequent (80-99%) |
| HP:0012378 | Fatigue | Very frequent (80-99%) |
| HP:0012735 | Cough | Very frequent (80-99%) |
| HP:0001369 | Arthritis | Frequent (30-79%) |
| HP:0001508 | Failure to thrive | Frequent (30-79%) |
| HP:0002754 | Osteomyelitis | Frequent (30-79%) |
| HP:0000218 | High palate | Occasional (5-29%) |
| HP:0000286 | Epicanthus | Occasional (5-29%) |
| HP:0000316 | Hypertelorism | Occasional (5-29%) |
| HP:0001287 | Meningitis | Occasional (5-29%) |
| HP:0001875 | Decreased total neutrophil count | Occasional (5-29%) |
| HP:0001944 | Dehydration | Occasional (5-29%) |
| HP:0002024 | Malabsorption | Occasional (5-29%) |
| HP:0002110 | Bronchiectasis | Occasional (5-29%) |
| HP:0012115 | Hepatitis | Occasional (5-29%) |
| HP:0100658 | Cellulitis | Occasional (5-29%) |
| HP:0100806 | Sepsis | Occasional (5-29%) |
| HP:0200043 | Verrucae | Occasional (5-29%) |
| HP:0000377 | Abnormal pinna morphology | Occasional (5-29%) |
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | autosomal agammaglobulinemia |
| Mondo ID | MONDO:0011096 |
| MeSH | C538056 |
| Orphanet | 33110 |
| UMLS | C1832241 |
| MedGen | 316941 |
| GARD | 0009640 |
| Is cancer (heuristic) | no |
Also known as: agammaglobulinemia, non-Bruton type · AGM
Data availability: 8 GenCC gene-disease records.
Disease family
An umbrella term covering 8 Mondo subtypes.
Classification path: disease › human disease › disease by body system or component › immune system disorder › inborn error of immunity › B cell deficiency › agammaglobulinemia › isolated agammaglobulinemia › autosomal agammaglobulinemia
Related subtypes (1): Bruton-type agammaglobulinemia
Subtypes (8): agammaglobulinemia 6, autosomal recessive, agammaglobulinemia 2, autosomal recessive, agammaglobulinemia 3, autosomal recessive, agammaglobulinemia 4, autosomal recessive, agammaglobulinemia 5, autosomal dominant, agammaglobulinemia 7, autosomal recessive, agammaglobulinemia 8, autosomal dominant, autosomal recessive agammaglobulinemia 1
Genetics & variants
GWAS landscape
No GWAS associations recorded — common-variant (GWAS) studies don’t cover this disease (typical for Mendelian / rare diseases). See the curated gene cohort and Mendelian overlap below.
Variant details and genetic-evidence tiers
No tiered GWAS variants or ClinVar records for this disease.
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 46 · Orphanet: 12 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
GenCC gene–disease validity (cohort genes)
the Disease column is the GenCC-asserted condition — a cohort gene’s strongest validity may be for a related predisposition syndrome.
| Gene | Classification | Inheritance | Disease | Records |
|---|---|---|---|---|
| CD79A | Definitive | Autosomal recessive | agammaglobulinemia 3, autosomal recessive | 4 |
| IGHM | Definitive | Autosomal recessive | autosomal recessive agammaglobulinemia 1 | 4 |
| BLNK | Strong | Autosomal recessive | agammaglobulinemia 4, autosomal recessive | 4 |
| CD79B | Strong | Autosomal recessive | agammaglobulinemia 6, autosomal recessive | 3 |
| IGLL1 | Strong | Autosomal recessive | agammaglobulinemia 2, autosomal recessive | 5 |
| PIK3R1 | Strong | Autosomal recessive | agammaglobulinemia 7, autosomal recessive | 13 |
| TCF3 | Strong | Autosomal dominant | agammaglobulinemia 8, autosomal dominant | 5 |
| TCF7L1 | Strong | Autosomal dominant | agammaglobulinemia 8, autosomal dominant | 6 |
| LRRC8A | Supportive | Autosomal dominant | autosomal agammaglobulinemia | 2 |
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|---|---|
| TCF3 | Orphanet:33110 | Autosomal non-syndromic agammaglobulinemia |
| TCF3 | Orphanet:585956 | B-lymphoblastic leukemia/lymphoma with t(1;19)(q23;p13.3) |
| TCF3 | Orphanet:641375 | B-lymphoblastic leukemia/lymphoma with t(17;19) |
| BLNK | Orphanet:33110 | Autosomal non-syndromic agammaglobulinemia |
| CD79A | Orphanet:33110 | Autosomal non-syndromic agammaglobulinemia |
| CD79B | Orphanet:33110 | Autosomal non-syndromic agammaglobulinemia |
| LRRC8A | Orphanet:33110 | Autosomal non-syndromic agammaglobulinemia |
| IGHM | Orphanet:33110 | Autosomal non-syndromic agammaglobulinemia |
| IGLL1 | Orphanet:33110 | Autosomal non-syndromic agammaglobulinemia |
| PIK3R1 | Orphanet:3163 | SHORT syndrome |
| PIK3R1 | Orphanet:33110 | Autosomal non-syndromic agammaglobulinemia |
| PIK3R1 | Orphanet:693681 | Activated PI3K-delta syndrome 2 |
Cohort genes → proteins
9 cohort genes, 9 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|---|
| multi_evidence | 9 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|---|---|---|---|---|
| TCF3 | HGNC:11633 | ENSG00000071564 | P15923 | Transcription factor E2-alpha | gencc |
| TCF7L1 | HGNC:11640 | ENSG00000152284 | Q9HCS4 | Transcription factor 7-like 1 | gencc |
| BLNK | HGNC:14211 | ENSG00000095585 | Q8WV28 | B-cell linker protein | gencc |
| CD79A | HGNC:1698 | ENSG00000105369 | P11912 | B-cell antigen receptor complex-associated protein alpha chain | gencc |
| CD79B | HGNC:1699 | ENSG00000007312 | P40259 | B-cell antigen receptor complex-associated protein beta chain | gencc |
| LRRC8A | HGNC:19027 | ENSG00000136802 | Q8IWT6 | Volume-regulated anion channel subunit LRRC8A | gencc |
| IGHM | HGNC:5541 | ENSG00000211899 | P01871 | Immunoglobulin heavy constant mu | gencc |
| IGLL1 | HGNC:5870 | ENSG00000128322 | P15814 | Immunoglobulin lambda-like polypeptide 1 | gencc |
| PIK3R1 | HGNC:8979 | ENSG00000145675 | P27986 | Phosphatidylinositol 3-kinase regulatory subunit alpha | gencc |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|---|---|
| TCF3 | Transcription factor E2-alpha | Transcriptional regulator involved in the initiation of neuronal differentiation and mesenchymal to epithelial transition. |
| TCF7L1 | Transcription factor 7-like 1 | Participates in the Wnt signaling pathway. |
| BLNK | B-cell linker protein | Functions as a central linker protein, downstream of the B-cell receptor (BCR), bridging the SYK kinase to a multitude of signaling pathways and regulating biological outcomes of B-cell function and development. |
| CD79A | B-cell antigen receptor complex-associated protein alpha chain | Required in cooperation with CD79B for initiation of the signal transduction cascade activated by binding of antigen to the B-cell antigen receptor complex (BCR) which leads to internalization of the complex, trafficking to late endosomes… |
| CD79B | B-cell antigen receptor complex-associated protein beta chain | Required in cooperation with CD79A for initiation of the signal transduction cascade activated by the B-cell antigen receptor complex (BCR) which leads to internalization of the complex, trafficking to late endosomes and antigen presentati… |
| LRRC8A | Volume-regulated anion channel subunit LRRC8A | Essential component of the volume-regulated anion channel (VRAC, also named VSOAC channel), an anion channel required to maintain a constant cell volume in response to extracellular or intracellular osmotic changes. |
| IGHM | Immunoglobulin heavy constant mu | Constant region of immunoglobulin heavy chains. |
| IGLL1 | Immunoglobulin lambda-like polypeptide 1 | Critical for B-cell development. |
| PIK3R1 | Phosphatidylinositol 3-kinase regulatory subunit alpha | Binds to activated (phosphorylated) protein-Tyr kinases, through its SH2 domain, and acts as an adapter, mediating the association of the p110 catalytic unit to the plasma membrane. |
Protein-family classification
Druggable: 5 · Difficult: 2 · Unknown: 2 · Druggable fraction: 0.56
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|---|---|---|
| Antibody/Immunoglobulin | 4 | 13.0× | 7e-04 |
| Kinase | 1 | 3.1× | 0.692 |
| Scaffold/PPI | 1 | 1.9× | 0.692 |
| Transcription factor | 1 | 0.9× | 0.859 |
| Other/Unknown | 2 | 0.4× | 0.992 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|---|---|---|---|
| TCF3 | Transcription factor | no | bHLH_dom, HLH_DNA-bd_sf, NeuroDiff_E-box_TFs | |
| TCF7L1 | Other/Unknown | no | HMG_box_dom, CTNNB1-bd_N, TCF/LEF | |
| BLNK | Scaffold/PPI | no | SH2, SH2_dom_sf, Immunoreceptor_sig_adapters | |
| CD79A | Antibody/Immunoglobulin | yes | Phos_immunorcpt_sig_ITAM, Ig_sub2, Ig_sub | |
| CD79B | Antibody/Immunoglobulin | yes | Phos_immunorcpt_sig_ITAM, Ig_sub, Ig-like_dom | |
| LRRC8A | Other/Unknown | no | Leu-rich_rpt, Leu-rich_rpt_typical-subtyp, LRRC8_Pannexin-like | |
| IGHM | Antibody/Immunoglobulin | yes | Ig/MHC_CS, Ig_C1-set, Ig-like_dom | |
| IGLL1 | Antibody/Immunoglobulin | yes | Ig/MHC_CS, Ig_C1-set, Ig-like_dom | |
| PIK3R1 | Kinase | yes | 2.7.1.153 | RhoGAP_dom, SH2, SH3_domain |
Expression context
Cohort genes with no expression data: 0.
9 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 0 |
| broad (>20) | 9 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|---|
| granulocyte | 3 |
| spleen | 3 |
| corpus epididymis | 2 |
| lymph node | 2 |
| embryo | 1 |
| ganglionic eminence | 1 |
| ventricular zone | 1 |
| aorta | 1 |
| popliteal artery | 1 |
| tibial artery | 1 |
| oral cavity | 1 |
| tongue squamous epithelium | 1 |
| gingiva | 1 |
| gingival epithelium | 1 |
| nasal cavity epithelium | 1 |
| vermiform appendix | 1 |
| bone marrow | 1 |
| bone marrow cell | 1 |
| male germ line stem cell (sensu Vertebrata) in testis | 1 |
| calcaneal tendon | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|---|---|---|---|
| TCF3 | 294 | ubiquitous | marker | ganglionic eminence, ventricular zone, embryo |
| TCF7L1 | 230 | ubiquitous | marker | popliteal artery, tibial artery, aorta |
| BLNK | 257 | broad | marker | tongue squamous epithelium, oral cavity, corpus epididymis |
| CD79A | 182 | broad | marker | spleen, granulocyte, lymph node |
| CD79B | 210 | broad | marker | granulocyte, spleen, lymph node |
| LRRC8A | 262 | ubiquitous | marker | gingival epithelium, nasal cavity epithelium, gingiva |
| IGHM | 180 | tissue_specific | marker | spleen, granulocyte, vermiform appendix |
| IGLL1 | 112 | tissue_specific | marker | bone marrow, bone marrow cell, male germ line stem cell (sensu Vertebrata) in testis |
| PIK3R1 | 294 | ubiquitous | marker | calcaneal tendon, caput epididymis, corpus epididymis |
Protein interactions among cohort
Intra-cohort edges: 10.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|---|
| PIK3R1 | 5,168 |
| CD79A | 3,177 |
| CD79B | 2,382 |
| TCF7L1 | 1,635 |
| LRRC8A | 1,554 |
| BLNK | 1,475 |
| IGLL1 | 1,349 |
| TCF3 | 457 |
| IGHM | 93 |
Intra-cohort edges
| A | B | Sources |
|---|---|---|
| BLNK | CD79A | biogrid_interaction, string_interaction |
| BLNK | CD79B | string_interaction |
| BLNK | IGLL1 | string_interaction |
| BLNK | LRRC8A | string_interaction |
| CD79A | CD79B | string_interaction |
| CD79A | IGLL1 | string_interaction |
| CD79A | LRRC8A | string_interaction |
| CD79B | IGLL1 | string_interaction |
| CD79B | LRRC8A | string_interaction |
| IGLL1 | LRRC8A | string_interaction |
Structural data
PDB: 8 · AlphaFold-only: 1 · No structure: 0
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|---|---|
| PIK3R1 | P27986 | 105 |
| IGHM | P01871 | 31 |
| LRRC8A | Q8IWT6 | 9 |
| TCF3 | P15923 | 5 |
| CD79A | P11912 | 5 |
| CD79B | P40259 | 5 |
| IGLL1 | P15814 | 3 |
| BLNK | Q8WV28 | 1 |
AlphaFold-only cohort genes (top 30 by pLDDT)
| Symbol | UniProt | pLDDT |
|---|---|---|
| TCF7L1 | Q9HCS4 | 52.59 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 122. Enrichment computed across 9 evidence-associated genes (9 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 9 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| Antigen activates B Cell Receptor (BCR) leading to generation of second messengers | 5 | 198.3× | 2e-09 | BLNK, CD79A, CD79B, IGHM, PIK3R1 |
| CD22 mediated BCR regulation | 3 | 761.3× | 2e-07 | CD79A, CD79B, IGHM |
| Potential therapeutics for SARS | 4 | 50.8× | 3e-05 | BLNK, CD79A, CD79B, IGHM |
| Signaling by the B Cell Receptor (BCR) | 3 | 115.3× | 6e-05 | BLNK, CD79A, CD79B |
| Regulation of signaling by CBL | 2 | 110.3× | 0.003 | BLNK, PIK3R1 |
| Interleukin-3, Interleukin-5 and GM-CSF signaling | 2 | 70.5× | 0.007 | BLNK, PIK3R1 |
| SARS-CoV Infections | 3 | 18.5× | 0.008 | BLNK, CD79A, CD79B |
| Viral Infection Pathways | 3 | 10.3× | 0.037 | BLNK, CD79A, CD79B |
| Adaptive Immune System | 3 | 9.9× | 0.037 | BLNK, CD79A, CD79B |
| MET activates PI3K/AKT signaling | 1 | 211.5× | 0.044 | PIK3R1 |
| Activated NTRK3 signals through PI3K | 1 | 211.5× | 0.044 | PIK3R1 |
| Cell surface interactions at the vascular wall | 2 | 21.1× | 0.044 | IGHM, IGLL1 |
| Infectious disease | 3 | 8.3× | 0.044 | BLNK, CD79A, CD79B |
| Activated NTRK2 signals through PI3K | 1 | 181.3× | 0.044 | PIK3R1 |
| Signaling by LTK in cancer | 1 | 181.3× | 0.044 | PIK3R1 |
| PI3K/AKT activation | 1 | 141.0× | 0.044 | PIK3R1 |
| Binding of TCF/LEF:CTNNB1 to target gene promoters | 1 | 126.9× | 0.044 | TCF7L1 |
| RUNX3 regulates WNT signaling | 1 | 126.9× | 0.044 | TCF7L1 |
| IRS-mediated signalling | 1 | 115.3× | 0.044 | PIK3R1 |
| PI3K events in ERBB4 signaling | 1 | 115.3× | 0.044 | PIK3R1 |
| Co-stimulation by ICOS | 1 | 115.3× | 0.044 | PIK3R1 |
| GP1b-IX-V activation signalling | 1 | 105.7× | 0.044 | PIK3R1 |
| Signaling by FGFR4 in disease | 1 | 105.7× | 0.044 | PIK3R1 |
| Erythropoietin activates Phosphoinositide-3-kinase (PI3K) | 1 | 105.7× | 0.044 | PIK3R1 |
| Signaling by PDGFRA transmembrane, juxtamembrane and kinase domain mutants | 1 | 97.6× | 0.044 | PIK3R1 |
| Signaling by PDGFRA extracellular domain mutants | 1 | 97.6× | 0.044 | PIK3R1 |
| Signaling by LTK | 1 | 97.6× | 0.044 | PIK3R1 |
| Signaling by FLT3 ITD and TKD mutants | 1 | 84.6× | 0.044 | PIK3R1 |
| Repression of WNT target genes | 1 | 79.3× | 0.044 | TCF7L1 |
| Constitutive Signaling by EGFRvIII | 1 | 79.3× | 0.044 | PIK3R1 |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 9 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| B cell differentiation | 5 | 121.6× | 2e-08 | TCF3, BLNK, CD79A, CD79B, PIK3R1 |
| B cell receptor signaling pathway | 4 | 178.3× | 2e-07 | BLNK, CD79A, CD79B, IGHM |
| intracellular glucose homeostasis | 2 | 129.1× | 0.003 | LRRC8A, PIK3R1 |
| adaptive immune response | 3 | 28.1× | 0.003 | CD79A, CD79B, IGHM |
| pre-B cell differentiation | 1 | 1872.4× | 0.009 | LRRC8A |
| immune response | 3 | 15.7× | 0.010 | CD79B, IGLL1, PIK3R1 |
| pre-B cell allelic exclusion | 1 | 624.1× | 0.015 | IGHM |
| regulation of toll-like receptor 4 signaling pathway | 1 | 624.1× | 0.015 | PIK3R1 |
| positive regulation of endoplasmic reticulum unfolded protein response | 1 | 624.1× | 0.015 | PIK3R1 |
| myeloid leukocyte migration | 1 | 468.1× | 0.018 | PIK3R1 |
| B cell lineage commitment | 1 | 374.5× | 0.018 | TCF3 |
| taurine transmembrane transport | 1 | 312.1× | 0.018 | LRRC8A |
| immunoglobulin V(D)J recombination | 1 | 312.1× | 0.018 | TCF3 |
| interleukin-18-mediated signaling pathway | 1 | 312.1× | 0.018 | PIK3R1 |
| monoatomic anion transmembrane transport | 1 | 312.1× | 0.018 | LRRC8A |
| cyclic-GMP-AMP transmembrane import across plasma membrane | 1 | 234.1× | 0.023 | LRRC8A |
| positive regulation of focal adhesion disassembly | 1 | 208.1× | 0.024 | PIK3R1 |
| response to osmotic stress | 1 | 170.2× | 0.025 | LRRC8A |
| monoatomic anion transport | 1 | 156.0× | 0.025 | LRRC8A |
| aspartate transmembrane transport | 1 | 156.0× | 0.025 | LRRC8A |
| protein hexamerization | 1 | 156.0× | 0.025 | LRRC8A |
| T follicular helper cell differentiation | 1 | 156.0× | 0.025 | PIK3R1 |
| growth hormone receptor signaling pathway | 1 | 133.8× | 0.028 | PIK3R1 |
| positive regulation of RNA splicing | 1 | 117.0× | 0.031 | PIK3R1 |
| positive regulation of leukocyte migration | 1 | 110.1× | 0.031 | PIK3R1 |
| negative regulation of cell-matrix adhesion | 1 | 98.5× | 0.032 | PIK3R1 |
| regulation of Wnt signaling pathway | 1 | 98.5× | 0.032 | TCF7L1 |
| immunoglobulin mediated immune response | 1 | 78.0× | 0.039 | IGLL1 |
| cell volume homeostasis | 1 | 66.9× | 0.041 | LRRC8A |
| positive regulation of lamellipodium assembly | 1 | 66.9× | 0.041 | PIK3R1 |
Therapeutics
Drug target analysis
Approved (phase 4): 1 · Phase ≥3: 1 · Phased (≥1): 1 · Undrugged: 8
Druggability breadth: 2 of 9 evidence-associated genes (22%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Genes with an approved drug
The molecule shown is one approved compound that hits the gene — not necessarily a drug of choice or one indicated for this disease.
| Symbol | Example approved molecule |
|---|---|
| PIK3R1 | IDELALISIB |
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|---|---|
| PIK3R1 | 26 | 4 |
| TCF3 | 0 | 0 |
| TCF7L1 | 0 | 0 |
| BLNK | 0 | 0 |
| CD79A | 0 | 0 |
| CD79B | 0 | 0 |
| LRRC8A | 0 | 0 |
| IGHM | 0 | 0 |
| IGLL1 | 0 | 0 |
Drugs targeting cohort genes (top 30)
| Molecule | Max phase | Targets in cohort |
|---|---|---|
| IDELALISIB | 4 | PIK3R1 |
| ALPELISIB | 4 | PIK3R1 |
| DUVELISIB | 4 | PIK3R1 |
| COPANLISIB | 4 | PIK3R1 |
| UMBRALISIB | 4 | PIK3R1 |
| DACTOLISIB | 3 | PIK3R1 |
| BUPARLISIB | 3 | PIK3R1 |
| QUERCETIN | 3 | PIK3R1 |
| OMIPALISIB | 2 | PIK3R1 |
| VISTUSERTIB | 2 | PIK3R1 |
| FIMEPINOSTAT | 2 | PIK3R1 |
| EGANELISIB | 2 | PIK3R1 |
| BERZOSERTIB | 2 | PIK3R1 |
| BIMIRALISIB | 2 | PIK3R1 |
| PICTILISIB | 2 | PIK3R1 |
| ZSTK-474 | 2 | PIK3R1 |
| GSK-2636771 | 2 | PIK3R1 |
| AMDIZALISIB | 2 | PIK3R1 |
| RISOVALISIB | 2 | PIK3R1 |
| DEZAPELISIB | 2 | PIK3R1 |
| ROGINOLISIB | 2 | PIK3R1 |
| AZD-8055 | 1 | PIK3R1 |
| VS-5584 | 1 | PIK3R1 |
| AZD-8186 | 1 | PIK3R1 |
| GS-9901 | 1 | PIK3R1 |
| AZD-7648 | 1 | PIK3R1 |
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 1.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|---|---|
| PIK3R1 | 493 | Binding:470, ADMET:23 |
| CD79B | 1 | Binding:1 |
Cohort enzymes (BRENDA EC)
| Symbol | EC numbers | Names |
|---|---|---|
| PIK3R1 | 2.7.1.153 | phosphatidylinositol-4,5-bisphosphate 3-kinase |
Cohort genes with high screening signal
≥100 ChEMBL assays — a studied-ness signal; see Therapeutics for approved-drug status.
| Symbol | ChEMBL assays |
|---|---|
| PIK3R1 | 493 |
Pharmacogenomics
Cohort genes with a PharmGKB record: 9; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Chemical tractability of cohort targets
26 approved/phased compounds have measured bioactivity against a cohort gene (and aren’t yet in disease-level trials). This is a research / tractability signal, NOT a therapeutic recommendation — a bioactivity row often reflects off-target or screening binding (e.g. promiscuous kinase inhibitors against a cohort kinase), implying no disease mechanism.
| Compound | Max phase | Cohort target (bioactivity) |
|---|---|---|
| IDELALISIB | 4 | PIK3R1 |
| ALPELISIB | 4 | PIK3R1 |
| DUVELISIB | 4 | PIK3R1 |
| COPANLISIB | 4 | PIK3R1 |
| UMBRALISIB | 4 | PIK3R1 |
| DACTOLISIB | 3 | PIK3R1 |
| BUPARLISIB | 3 | PIK3R1 |
| QUERCETIN | 3 | PIK3R1 |
| OMIPALISIB | 2 | PIK3R1 |
| VISTUSERTIB | 2 | PIK3R1 |
| FIMEPINOSTAT | 2 | PIK3R1 |
| EGANELISIB | 2 | PIK3R1 |
| BERZOSERTIB | 2 | PIK3R1 |
| BIMIRALISIB | 2 | PIK3R1 |
| PICTILISIB | 2 | PIK3R1 |
| ZSTK-474 | 2 | PIK3R1 |
| GSK-2636771 | 2 | PIK3R1 |
| AMDIZALISIB | 2 | PIK3R1 |
| RISOVALISIB | 2 | PIK3R1 |
| DEZAPELISIB | 2 | PIK3R1 |
| ROGINOLISIB | 2 | PIK3R1 |
| AZD-8055 | 1 | PIK3R1 |
| VS-5584 | 1 | PIK3R1 |
| AZD-8186 | 1 | PIK3R1 |
| GS-9901 | 1 | PIK3R1 |
| AZD-7648 | 1 | PIK3R1 |
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|---|---|---|
| A | Approved (phase 4 drug) | 1 | PIK3R1 |
| B | Phased (≥1) drug, not yet approved | 0 | |
| C | Druggable family + PDB, no drug | 4 | CD79A, CD79B, IGHM, IGLL1 |
| D | Druggable family + AlphaFold only, no drug | 0 | |
| E | Difficult family or no structure, no drug | 4 | TCF3, TCF7L1, BLNK, LRRC8A |
Undrugged target profiles
8 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
| Symbol | ChEMBL assays | Drugged partners (top 3) |
|---|---|---|
| TCF3 | 0 | — |
| TCF7L1 | 0 | — |
| BLNK | 0 | — |
| CD79A | 0 | — |
| CD79B | 1 | — |
| LRRC8A | 0 | — |
| IGHM | 0 | — |
| IGLL1 | 0 | — |
Clinical trials & evidence
Clinical trials
Clinical trials: 0.