Autosomal dominant macrothrombocytopenia
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Summary
Autosomal dominant macrothrombocytopenia (MONDO:0015372) is a disease caused by GP1BB (GenCC Strong), with 9 cohort genes. The dominant Reactome pathway is Platelet Aggregation (Plug Formation) (4 cohort genes).
At a glance
- Prevalence: <1 / 1 000 000 (Worldwide) [Orphanet-validated]
- Causal gene: GP1BB (GenCC Strong)
- Cohort genes: 9
- ClinVar variants: 1
- Phenotypes (HPO): 9
Clinical features
Epidemiology
Prevalence records
2 prevalence record(s), Orphanet:
| Type | Class | Value | Geography | Validation |
|---|---|---|---|---|
| Cases/families | 100 | Worldwide | Validated | |
| Point prevalence | <1 / 1 000 000 | Worldwide | Validated |
Signs & symptoms
Clinical features (HPO)
9 HPO clinical features (Orphanet curated; top 9 by frequency):
| HPO ID | Term | Frequency |
|---|---|---|
| HP:0001873 | Thrombocytopenia | Very frequent (80-99%) |
| HP:0011877 | Increased mean platelet volume | Very frequent (80-99%) |
| HP:0040185 | Macrothrombocytopenia | Very frequent (80-99%) |
| HP:0032438 | Platelet anisocytosis | Frequent (30-79%) |
| HP:0000421 | Epistaxis | Occasional (5-29%) |
| HP:0000978 | Bruising susceptibility | Occasional (5-29%) |
| HP:0004846 | Prolonged bleeding after surgery | Occasional (5-29%) |
| HP:0006298 | Prolonged bleeding after dental extraction | Occasional (5-29%) |
| HP:0100608 | Metrorrhagia | Occasional (5-29%) |
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | autosomal dominant macrothrombocytopenia |
| Mondo ID | MONDO:0015372 |
| Orphanet | 140957 |
| SNOMED CT | 720521008 |
| UMLS | C4304021 |
| MedGen | 929690 |
| GARD | 0016965 |
| Is cancer (heuristic) | no |
Data availability: 1 ClinVar variant · 10 GenCC gene-disease records.
Disease family
An umbrella term covering 3 Mondo subtypes.
Classification path: disease › human disease › disease by body system or component › hematologic disorder › blood platelet disease › thrombocytopenia › inherited thrombocytopenia › autosomal dominant macrothrombocytopenia
Related subtypes (20): thrombocytopenia 2, thrombocytopenia, cyclic, thrombocytopenia 3, congenital thrombotic thrombocytopenic purpura, thrombocytopenia, X-linked, with or without dyserythropoietic anemia, thrombocytopenia 1, thrombocytopenia 4, thrombocytopenia 5, isolated delta-storage pool disease, syndromic constitutional thrombocytopenia, alpha granule disease, thrombocytopenia 7, macrothrombocytopenia, isolated, congenital autosomal recessive small-platelet thrombocytopenia, congenital amegakaryocytic thrombocytopenia, thrombocytopenia 9, thrombocytopenia 10, thrombocytopenia 11 with multiple congenital anomalies and dysmorphic facies, thrombocytopenia 12 with or without myopathy, thrombocytopenia 13, syndromic
Subtypes (3): platelet-type bleeding disorder 15, macrothrombocytopenia, isolated, 2, autosomal dominant, macrothrombocytopenia, isolated, 1, autosomal dominant
Genetics & variants
GWAS landscape
No GWAS associations recorded — common-variant (GWAS) studies don’t cover this disease (typical for Mendelian / rare diseases). See the curated gene cohort and Mendelian overlap below.
Variant details and genetic-evidence tiers
ClinVar germline variants
1 retrieved; paginated sample, class counts are floors:
1 pathogenic
| ClinVar | Variant (HGVS) | Gene | Classification | Review |
|---|---|---|---|---|
| 1324499 | NM_000407.5(GP1BB):c.423C>A (p.Cys141Ter) | SEPT5-GP1BB | Pathogenic | reviewed by expert panel |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 59 · Orphanet: 22 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
GenCC gene–disease validity (cohort genes)
the Disease column is the GenCC-asserted condition — a cohort gene’s strongest validity may be for a related predisposition syndrome.
| Gene | Classification | Inheritance | Disease | Records |
|---|---|---|---|---|
| TUBB1 | Definitive | Autosomal dominant | macrothrombocytopenia, isolated, 1, autosomal dominant | 5 |
| GP1BB | Strong | Autosomal dominant | autosomal dominant macrothrombocytopenia | 6 |
| ACTN1 | Supportive | Autosomal dominant | autosomal dominant macrothrombocytopenia | 5 |
| GFI1B | Supportive | Autosomal dominant | autosomal dominant macrothrombocytopenia | 5 |
| GP1BA | Supportive | Autosomal dominant | autosomal dominant macrothrombocytopenia | 12 |
| ITGA2B | Supportive | Autosomal dominant | autosomal dominant macrothrombocytopenia | 10 |
| ITGB3 | Supportive | Autosomal dominant | autosomal dominant macrothrombocytopenia | 7 |
| TPM4 | Supportive | Autosomal dominant | autosomal dominant macrothrombocytopenia | 2 |
| TRPM7 | Supportive | Autosomal dominant | autosomal dominant macrothrombocytopenia | 7 |
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|---|---|
| TPM4 | Orphanet:140957 | Autosomal dominant macrothrombocytopenia |
| TPM4 | Orphanet:178342 | Inflammatory myofibroblastic tumor |
| TUBB1 | Orphanet:140957 | Autosomal dominant macrothrombocytopenia |
| ACTN1 | Orphanet:140957 | Autosomal dominant macrothrombocytopenia |
| TRPM7 | Orphanet:140957 | Autosomal dominant macrothrombocytopenia |
| TRPM7 | Orphanet:90020 | Parkinson-dementia complex of Guam |
| GFI1B | Orphanet:140957 | Autosomal dominant macrothrombocytopenia |
| GFI1B | Orphanet:734 | Alpha delta granule deficiency |
| GP1BA | Orphanet:140957 | Autosomal dominant macrothrombocytopenia |
| GP1BA | Orphanet:274 | Bernard-Soulier syndrome |
| GP1BA | Orphanet:52530 | Pseudo-von Willebrand disease |
| GP1BA | Orphanet:853 | Fetal and neonatal alloimmune thrombocytopenia |
| GP1BB | Orphanet:140957 | Autosomal dominant macrothrombocytopenia |
| GP1BB | Orphanet:274 | Bernard-Soulier syndrome |
| GP1BB | Orphanet:567 | 22q11.2 deletion syndrome |
| GP1BB | Orphanet:853 | Fetal and neonatal alloimmune thrombocytopenia |
| ITGA2B | Orphanet:140957 | Autosomal dominant macrothrombocytopenia |
| ITGA2B | Orphanet:849 | Glanzmann thrombasthenia |
| ITGA2B | Orphanet:853 | Fetal and neonatal alloimmune thrombocytopenia |
| ITGB3 | Orphanet:140957 | Autosomal dominant macrothrombocytopenia |
| ITGB3 | Orphanet:849 | Glanzmann thrombasthenia |
| ITGB3 | Orphanet:853 | Fetal and neonatal alloimmune thrombocytopenia |
Cohort genes → proteins
9 cohort genes, 9 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|---|
| multi_evidence | 9 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|---|---|---|---|---|
| TPM4 | HGNC:12013 | ENSG00000167460 | P67936 | Tropomyosin alpha-4 chain | gencc |
| TUBB1 | HGNC:16257 | ENSG00000101162 | Q9H4B7 | Tubulin beta-1 chain | gencc |
| ACTN1 | HGNC:163 | ENSG00000072110 | P12814 | Alpha-actinin-1 | gencc |
| TRPM7 | HGNC:17994 | ENSG00000092439 | Q96QT4 | Transient receptor potential cation channel subfamily M member 7 | gencc |
| GFI1B | HGNC:4238 | ENSG00000165702 | Q5VTD9 | Zinc finger protein Gfi-1b | gencc |
| GP1BA | HGNC:4439 | ENSG00000185245 | P07359 | Platelet glycoprotein Ib alpha chain | gencc |
| GP1BB | HGNC:4440 | ENSG00000203618 | P13224 | Platelet glycoprotein Ib beta chain | gencc |
| ITGA2B | HGNC:6138 | ENSG00000005961 | P08514 | Integrin alpha-IIb | gencc |
| ITGB3 | HGNC:6156 | ENSG00000259207 | P05106 | Integrin beta-3 | gencc |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|---|---|
| TPM4 | Tropomyosin alpha-4 chain | Binds to actin filaments in muscle and non-muscle cells. |
| TUBB1 | Tubulin beta-1 chain | Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. |
| ACTN1 | Alpha-actinin-1 | F-actin cross-linking protein which is thought to anchor actin to a variety of intracellular structures. |
| TRPM7 | Transient receptor potential cation channel subfamily M member 7 | Bifunctional protein that combines an ion channel with an intrinsic kinase domain, enabling it to modulate cellular functions either by conducting ions through the pore or by phosphorylating downstream proteins via its kinase domain. |
| GFI1B | Zinc finger protein Gfi-1b | Essential proto-oncogenic transcriptional regulator necessary for development and differentiation of erythroid and megakaryocytic lineages. |
| GP1BA | Platelet glycoprotein Ib alpha chain | GP-Ib, a surface membrane protein of platelets, participates in the formation of platelet plugs by binding to the A1 domain of vWF, which is already bound to the subendothelium. |
| GP1BB | Platelet glycoprotein Ib beta chain | Gp-Ib, a surface membrane protein of platelets, participates in the formation of platelet plugs by binding to von Willebrand factor, which is already bound to the subendothelium. |
| ITGA2B | Integrin alpha-IIb | Integrin alpha-IIb/beta-3 (ITGA2B:ITGB3) is a receptor for fibronectin, fibrinogen, plasminogen, prothrombin, thrombospondin and vitronectin. |
| ITGB3 | Integrin beta-3 | Integrin alpha-V/beta-3 (ITGAV:ITGB3) is a receptor for cytotactin, fibronectin, laminin, matrix metalloproteinase-2, osteopontin, osteomodulin, prothrombin, thrombospondin, vitronectin and von Willebrand factor. |
Protein-family classification
Druggable: 2 · Difficult: 1 · Unknown: 6 · Druggable fraction: 0.22
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|---|---|---|
| Antibody/Immunoglobulin | 1 | 3.2× | 0.507 |
| Kinase | 1 | 3.1× | 0.507 |
| Other/Unknown | 6 | 1.2× | 0.507 |
| Transcription factor | 1 | 0.9× | 0.687 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|---|---|---|---|
| TPM4 | Other/Unknown | no | Tropomyosin, XRCC4-like_C | |
| TUBB1 | Other/Unknown | no | Tubulin, Beta_tubulin, Tubulin_FtsZ_GTPase | |
| ACTN1 | Other/Unknown | no | Actinin_actin-bd_CS, CH_dom, Spectrin_repeat | |
| TRPM7 | Kinase | yes | a-kinase_dom, Kinase-like_dom_sf, TRPM7_a-kinase_dom | |
| GFI1B | Transcription factor | no | Znf_C2H2_type, Znf_C2H2_sf | |
| GP1BA | Other/Unknown | no | LRRNT, Cys-rich_flank_reg_C, Leu-rich_rpt | |
| GP1BB | Other/Unknown | no | LRRNT, Cys-rich_flank_reg_C, LRR_dom_sf | |
| ITGA2B | Antibody/Immunoglobulin | yes | Integrin_alpha, FG-GAP, Int_alpha_beta-p | |
| ITGB3 | Other/Unknown | no | Integrin_bsu_VWA, Integrin_bsu_tail, EGF_extracell |
Expression context
Cohort genes with no expression data: 0.
9 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 0 |
| broad (>20) | 9 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|---|
| monocyte | 6 |
| leukocyte | 5 |
| mononuclear cell | 4 |
| right coronary artery | 1 |
| stromal cell of endometrium | 1 |
| tendon of biceps brachii | 1 |
| ascending aorta | 1 |
| blood vessel layer | 1 |
| saphenous vein | 1 |
| calcaneal tendon | 1 |
| cardiac muscle of right atrium | 1 |
| left ventricle myocardium | 1 |
| sperm | 1 |
| trabecular bone tissue | 1 |
| granulocyte | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|---|---|---|---|
| TPM4 | 281 | ubiquitous | marker | tendon of biceps brachii, stromal cell of endometrium, right coronary artery |
| TUBB1 | 140 | tissue_specific | marker | monocyte, mononuclear cell, leukocyte |
| ACTN1 | 292 | ubiquitous | marker | blood vessel layer, saphenous vein, ascending aorta |
| TRPM7 | 247 | ubiquitous | marker | left ventricle myocardium, calcaneal tendon, cardiac muscle of right atrium |
| GFI1B | 126 | tissue_specific | marker | sperm, trabecular bone tissue, monocyte |
| GP1BA | 186 | tissue_specific | marker | monocyte, mononuclear cell, leukocyte |
| GP1BB | 121 | broad | marker | monocyte, leukocyte, granulocyte |
| ITGA2B | 182 | broad | marker | monocyte, mononuclear cell, leukocyte |
| ITGB3 | 199 | ubiquitous | marker | monocyte, mononuclear cell, leukocyte |
Protein interactions among cohort
Intra-cohort edges: 8.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|---|
| TUBB1 | 4,106 |
| ITGB3 | 3,274 |
| ACTN1 | 3,220 |
| ITGA2B | 2,486 |
| TRPM7 | 1,995 |
| GP1BA | 1,703 |
| GFI1B | 1,554 |
| GP1BB | 1,280 |
| TPM4 | 557 |
Intra-cohort edges
| A | B | Sources |
|---|---|---|
| ACTN1 | GFI1B | intact |
| ACTN1 | TPM4 | biogrid_interaction |
| GFI1B | ITGA2B | string_interaction |
| GP1BA | GP1BB | biogrid_interaction, intact, string_interaction |
| GP1BA | ITGA2B | string_interaction |
| GP1BA | ITGB3 | string_interaction |
| GP1BB | ITGA2B | string_interaction |
| ITGA2B | ITGB3 | biogrid_interaction, intact, string_interaction |
Structural data
PDB: 5 · AlphaFold-only: 4 · No structure: 0
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|---|---|
| ITGB3 | P05106 | 123 |
| ITGA2B | P08514 | 78 |
| GP1BA | P07359 | 22 |
| ACTN1 | P12814 | 4 |
| GP1BB | P13224 | 3 |
AlphaFold-only cohort genes (top 30 by pLDDT)
| Symbol | UniProt | pLDDT |
|---|---|---|
| TPM4 | P67936 | 93.33 |
| TUBB1 | Q9H4B7 | 90.92 |
| TRPM7 | Q96QT4 | 69.90 |
| GFI1B | Q5VTD9 | 64.09 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 155. Enrichment computed across 9 evidence-associated genes (8 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 8 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| Platelet Aggregation (Plug Formation) | 4 | 219.6× | 2e-07 | GP1BA, GP1BB, ITGA2B, ITGB3 |
| Defective F9 activation | 2 | 475.8× | 3e-04 | GP1BA, GP1BB |
| Enhanced binding of GP1BA variant to VWF multimer:collagen | 2 | 407.9× | 3e-04 | GP1BA, GP1BB |
| Defective binding of VWF variant to GPIb:IX:V | 2 | 407.9× | 3e-04 | GP1BA, GP1BB |
| Response to elevated platelet cytosolic Ca2+ | 3 | 61.2× | 4e-04 | ACTN1, ITGA2B, ITGB3 |
| FXIIa, PKa-dependent activation of coagulation pathway | 2 | 285.5× | 5e-04 | GP1BA, GP1BB |
| GP1b-IX-V activation signalling | 2 | 237.9× | 6e-04 | GP1BA, GP1BB |
| Fibrin formation | 2 | 219.6× | 6e-04 | ITGA2B, ITGB3 |
| L1CAM interactions | 3 | 45.1× | 6e-04 | TUBB1, ITGA2B, ITGB3 |
| Hemostasis | 4 | 18.0× | 6e-04 | TUBB1, ACTN1, ITGA2B, ITGB3 |
| p130Cas linkage to MAPK signaling for integrins | 2 | 190.3× | 6e-04 | ITGA2B, ITGB3 |
| Platelet activation, signaling and aggregation | 3 | 39.6× | 6e-04 | ACTN1, ITGA2B, ITGB3 |
| GRB2:SOS provides linkage to MAPK signaling for Integrins | 2 | 178.4× | 6e-04 | ITGA2B, ITGB3 |
| Platelet Adhesion to exposed collagen | 2 | 167.9× | 6e-04 | GP1BA, GP1BB |
| Amplification and propagation of coagulation cascade | 2 | 158.6× | 7e-04 | GP1BA, GP1BB |
| Platelet degranulation | 3 | 32.9× | 8e-04 | ACTN1, ITGA2B, ITGB3 |
| Signal transduction by L1 | 2 | 129.8× | 9e-04 | ITGA2B, ITGB3 |
| Syndecan interactions | 2 | 105.7× | 0.001 | ACTN1, ITGB3 |
| Integrin signaling | 2 | 105.7× | 0.001 | ITGA2B, ITGB3 |
| Signaling by RAS mutants | 2 | 105.7× | 0.001 | ITGA2B, ITGB3 |
| Extracellular matrix organization | 3 | 23.7× | 0.002 | ACTN1, ITGA2B, ITGB3 |
| Signaling by high-kinase activity BRAF mutants | 2 | 79.3× | 0.002 | ITGA2B, ITGB3 |
| MAP2K and MAPK activation | 2 | 71.4× | 0.002 | ITGA2B, ITGB3 |
| Signaling by RAF1 mutants | 2 | 69.6× | 0.002 | ITGA2B, ITGB3 |
| Signaling by moderate kinase activity BRAF mutants | 2 | 63.4× | 0.002 | ITGA2B, ITGB3 |
| Paradoxical activation of RAF signaling by kinase inactive BRAF | 2 | 63.4× | 0.002 | ITGA2B, ITGB3 |
| Signaling downstream of RAS mutants | 2 | 63.4× | 0.002 | ITGA2B, ITGB3 |
| Oncogenic MAPK signaling | 2 | 62.1× | 0.002 | ITGA2B, ITGB3 |
| Regulation of clotting cascade | 2 | 58.3× | 0.003 | GP1BA, GP1BB |
| Axon guidance | 3 | 16.9× | 0.003 | TUBB1, ITGA2B, ITGB3 |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 9 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| platelet formation | 3 | 234.1× | 2e-05 | TPM4, TUBB1, ACTN1 |
| platelet activation | 3 | 89.2× | 2e-04 | GP1BA, GP1BB, ITGB3 |
| blood coagulation, intrinsic pathway | 2 | 468.1× | 3e-04 | GP1BA, GP1BB |
| positive regulation of platelet activation | 2 | 288.1× | 5e-04 | GP1BA, GP1BB |
| megakaryocyte development | 2 | 156.0× | 0.002 | GP1BA, GP1BB |
| release of sequestered calcium ion into cytosol | 2 | 76.4× | 0.005 | GP1BA, GP1BB |
| platelet aggregation | 2 | 74.9× | 0.005 | TUBB1, ITGB3 |
| regulation of serotonin uptake | 1 | 1872.4× | 0.007 | ITGB3 |
| positive regulation of adenylate cyclase-inhibiting opioid receptor signaling pathway | 1 | 1872.4× | 0.007 | ITGB3 |
| calcium-dependent cell-matrix adhesion | 1 | 936.2× | 0.009 | TRPM7 |
| negative regulation of lipoprotein metabolic process | 1 | 936.2× | 0.009 | ITGB3 |
| regulation of trophoblast cell migration | 1 | 936.2× | 0.009 | ITGB3 |
| platelet morphogenesis | 1 | 624.1× | 0.009 | ACTN1 |
| maintenance of postsynaptic specialization structure | 1 | 624.1× | 0.009 | ITGB3 |
| regulation of postsynaptic neurotransmitter receptor diffusion trapping | 1 | 624.1× | 0.009 | ITGB3 |
| blood coagulation | 2 | 38.6× | 0.009 | GP1BA, ITGB3 |
| cell-matrix adhesion | 2 | 36.4× | 0.009 | ITGA2B, ITGB3 |
| integrin-mediated signaling pathway | 2 | 35.7× | 0.009 | ITGA2B, ITGB3 |
| cell adhesion | 3 | 12.5× | 0.009 | GP1BA, GP1BB, ITGB3 |
| negative regulation of lipid transport | 1 | 468.1× | 0.011 | ITGB3 |
| tube development | 1 | 468.1× | 0.011 | ITGB3 |
| apolipoprotein A-I-mediated signaling pathway | 1 | 468.1× | 0.011 | ITGB3 |
| actin filament organization | 2 | 26.4× | 0.012 | TPM4, ACTN1 |
| cell-substrate junction assembly | 1 | 312.1× | 0.014 | ITGB3 |
| intracellular magnesium ion homeostasis | 1 | 312.1× | 0.014 | TRPM7 |
| positive regulation of glomerular mesangial cell proliferation | 1 | 312.1× | 0.014 | ITGB3 |
| magnesium ion homeostasis | 1 | 208.1× | 0.016 | TRPM7 |
| smooth muscle cell migration | 1 | 208.1× | 0.016 | ITGB3 |
| regulation of blood coagulation | 1 | 208.1× | 0.016 | GP1BA |
| actin filament network formation | 1 | 208.1× | 0.016 | ACTN1 |
Therapeutics
Drug target analysis
Approved (phase 4): 3 · Phase ≥3: 3 · Phased (≥1): 3 · Undrugged: 6
Druggability breadth: 7 of 9 evidence-associated genes (78%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Genes with an approved drug
The molecule shown is one approved compound that hits the gene — not necessarily a drug of choice or one indicated for this disease.
| Symbol | Example approved molecule |
|---|---|
| TUBB1 | COLCHICINE |
| ITGA2B | EPTIFIBATIDE |
| ITGB3 | EPTIFIBATIDE |
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|---|---|
| TUBB1 | 22 | 4 |
| ITGB3 | 18 | 4 |
| ITGA2B | 14 | 4 |
| TPM4 | 0 | 0 |
| ACTN1 | 0 | 0 |
| TRPM7 | 0 | 0 |
| GFI1B | 0 | 0 |
| GP1BA | 0 | 0 |
| GP1BB | 0 | 0 |
Drugs targeting cohort genes (top 30)
| Molecule | Max phase | Targets in cohort |
|---|---|---|
| COLCHICINE | 4 | TUBB1 |
| VINBLASTINE | 4 | TUBB1 |
| LEVOFLOXACIN ANHYDROUS | 4 | TUBB1 |
| DOCETAXEL | 4 | TUBB1 |
| NOSCAPINE | 4 | TUBB1 |
| VINBLASTINE SULFATE | 4 | TUBB1 |
| PACLITAXEL | 4 | ITGB3, TUBB1 |
| LEVOFLOXACIN | 4 | TUBB1 |
| VINORELBINE | 4 | TUBB1 |
| TIRBANIBULIN | 4 | TUBB1 |
| PODOFILOX | 4 | TUBB1 |
| VINCRISTINE | 4 | TUBB1 |
| DOCETAXEL ANHYDROUS | 4 | TUBB1 |
| EPTIFIBATIDE | 4 | ITGA2B, ITGB3 |
| ASPIRIN | 4 | ITGA2B, ITGB3 |
| TIROFIBAN | 4 | ITGA2B, ITGB3 |
| PATUPILONE | 3 | TUBB1 |
| NAFAMOSTAT | 3 | ITGA2B, ITGB3 |
| CILENGITIDE | 3 | ITGA2B, ITGB3 |
| TALTOBULIN | 2 | TUBB1 |
| ABT-751 | 2 | TUBB1 |
| MAYTANSINE | 2 | TUBB1 |
| DOLASTATIN-10 | 2 | TUBB1 |
| INDIBULIN | 2 | TUBB1 |
| PARBENDAZOLE | 2 | TUBB1 |
| NOCODAZOLE | 2 | TUBB1 |
| LAMIFIBAN | 2 | ITGA2B, ITGB3 |
| ROXIFIBAN | 2 | ITGA2B, ITGB3 |
| FRADAFIBAN | 2 | ITGA2B, ITGB3 |
| LOTRAFIBAN | 2 | ITGA2B, ITGB3 |
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 0.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|---|---|
| TUBB1 | 1,765 | Binding:1723, Functional:36, ADMET:6 |
| ITGB3 | 771 | Binding:575, Functional:183, ADMET:13 |
| ITGA2B | 407 | Binding:246, Functional:159, ADMET:2 |
| TRPM7 | 34 | Binding:34 |
| TPM4 | 4 | Binding:4 |
| ACTN1 | 1 | Binding:1 |
Cohort genes with high screening signal
≥100 ChEMBL assays — a studied-ness signal; see Therapeutics for approved-drug status.
| Symbol | ChEMBL assays |
|---|---|
| TUBB1 | 1,765 |
| ITGA2B | 407 |
| ITGB3 | 771 |
Pharmacogenomics
Cohort genes with a PharmGKB record: 9; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Chemical tractability of cohort targets
30 approved/phased compounds have measured bioactivity against a cohort gene (and aren’t yet in disease-level trials). This is a research / tractability signal, NOT a therapeutic recommendation — a bioactivity row often reflects off-target or screening binding (e.g. promiscuous kinase inhibitors against a cohort kinase), implying no disease mechanism.
| Compound | Max phase | Cohort target (bioactivity) |
|---|---|---|
| COLCHICINE | 4 | TUBB1 |
| VINBLASTINE | 4 | TUBB1 |
| LEVOFLOXACIN ANHYDROUS | 4 | TUBB1 |
| DOCETAXEL | 4 | TUBB1 |
| NOSCAPINE | 4 | TUBB1 |
| VINBLASTINE SULFATE | 4 | TUBB1 |
| PACLITAXEL | 4 | ITGB3, TUBB1 |
| LEVOFLOXACIN | 4 | TUBB1 |
| VINORELBINE | 4 | TUBB1 |
| TIRBANIBULIN | 4 | TUBB1 |
| PODOFILOX | 4 | TUBB1 |
| VINCRISTINE | 4 | TUBB1 |
| DOCETAXEL ANHYDROUS | 4 | TUBB1 |
| EPTIFIBATIDE | 4 | ITGA2B, ITGB3 |
| ASPIRIN | 4 | ITGA2B, ITGB3 |
| TIROFIBAN | 4 | ITGA2B, ITGB3 |
| PATUPILONE | 3 | TUBB1 |
| NAFAMOSTAT | 3 | ITGA2B, ITGB3 |
| CILENGITIDE | 3 | ITGA2B, ITGB3 |
| TALTOBULIN | 2 | TUBB1 |
| ABT-751 | 2 | TUBB1 |
| MAYTANSINE | 2 | TUBB1 |
| DOLASTATIN-10 | 2 | TUBB1 |
| INDIBULIN | 2 | TUBB1 |
| PARBENDAZOLE | 2 | TUBB1 |
| NOCODAZOLE | 2 | TUBB1 |
| LAMIFIBAN | 2 | ITGA2B, ITGB3 |
| ROXIFIBAN | 2 | ITGA2B, ITGB3 |
| FRADAFIBAN | 2 | ITGA2B, ITGB3 |
| LOTRAFIBAN | 2 | ITGA2B, ITGB3 |
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|---|---|---|
| A | Approved (phase 4 drug) | 3 | TUBB1, ITGA2B, ITGB3 |
| B | Phased (≥1) drug, not yet approved | 0 | |
| C | Druggable family + PDB, no drug | 0 | |
| D | Druggable family + AlphaFold only, no drug | 1 | TRPM7 |
| E | Difficult family or no structure, no drug | 5 | TPM4, ACTN1, GFI1B, GP1BA, GP1BB |
Undrugged target profiles
6 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
| Symbol | ChEMBL assays | Drugged partners (top 3) |
|---|---|---|
| TPM4 | 4 | — |
| ACTN1 | 1 | — |
| TRPM7 | 34 | — |
| GFI1B | 0 | — |
| GP1BA | 0 | — |
| GP1BB | 0 | — |
Clinical trials & evidence
Clinical trials
Clinical trials: 0.