Autosomal dominant nonsyndromic hearing loss 65
diseaseOn this page
Also known as autosomal dominant deafness 65autosomal dominant nonsyndromic deafness 65autosomal dominant nonsyndromic deafness caused by mutation in TBC1D24autosomal dominant nonsyndromic deafness type 65deafness, autosomal dominant 65deafness, autosomal dominant type 65DFNA65TBC1D24 autosomal dominant nonsyndromic deafness
Summary
Autosomal dominant nonsyndromic hearing loss 65 (MONDO:0014470) is a disease caused by TBC1D24 (GenCC Strong), with 5 cohort genes.
At a glance
- Causal gene: TBC1D24 (GenCC Strong)
- Cohort genes: 5
- ClinVar variants: 748
Clinical features
No curated clinical features (Orphanet) for this disease.
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | autosomal dominant nonsyndromic hearing loss 65 |
| Mondo ID | MONDO:0014470 |
| OMIM | 616044 |
| DOID | DOID:0110586 |
| UMLS | C3892048 |
| MedGen | 856147 |
| GARD | 0018140 |
| Is cancer (heuristic) | no |
Also known as: autosomal dominant deafness 65 · autosomal dominant nonsyndromic deafness 65 · autosomal dominant nonsyndromic deafness caused by mutation in TBC1D24 · autosomal dominant nonsyndromic deafness type 65 · deafness, autosomal dominant 65 · deafness, autosomal dominant type 65 · DFNA65 · TBC1D24 autosomal dominant nonsyndromic deafness
Data availability: 748 ClinVar variants · 3 GenCC gene-disease records.
Disease family
Classification path: disease › human disease › disease by etiologic mechanism › disease of genetic or genomic mechanism › hereditary disease › autosomal genetic disease › autosomal dominant disease › autosomal dominant nonsyndromic hearing loss › autosomal dominant nonsyndromic hearing loss 65
Related subtypes (75): autosomal dominant nonsyndromic hearing loss 1, autosomal dominant nonsyndromic hearing loss 2A, autosomal dominant nonsyndromic hearing loss 4A, autosomal dominant nonsyndromic hearing loss 6, autosomal dominant nonsyndromic hearing loss 5, autosomal dominant nonsyndromic hearing loss 10, autosomal dominant nonsyndromic hearing loss 11, autosomal dominant nonsyndromic hearing loss 9, autosomal dominant nonsyndromic hearing loss 7, autosomal dominant nonsyndromic hearing loss 12, autosomal dominant nonsyndromic hearing loss 3A, autosomal dominant nonsyndromic hearing loss 13, autosomal dominant nonsyndromic hearing loss 15, autosomal dominant nonsyndromic hearing loss 17, autosomal dominant nonsyndromic hearing loss 16, autosomal dominant nonsyndromic hearing loss 20, autosomal dominant nonsyndromic hearing loss 23, autosomal dominant nonsyndromic hearing loss 25, autosomal dominant nonsyndromic hearing loss 18, autosomal dominant nonsyndromic hearing loss 24, autosomal dominant nonsyndromic hearing loss 22, autosomal dominant nonsyndromic hearing loss 30, autosomal dominant nonsyndromic hearing loss 36, autosomal dominant nonsyndromic hearing loss 21, autosomal dominant nonsyndromic hearing loss 44, autosomal dominant nonsyndromic hearing loss 48, autosomal dominant nonsyndromic hearing loss 41, autosomal dominant nonsyndromic hearing loss 49, autosomal dominant nonsyndromic hearing loss 43, autosomal dominant nonsyndromic hearing loss 28, autosomal dominant nonsyndromic hearing loss 31, autosomal dominant nonsyndromic hearing loss 47, autosomal dominant auditory neuropathy 1, autosomal dominant nonsyndromic hearing loss 53, autosomal dominant nonsyndromic hearing loss 27, autosomal dominant nonsyndromic hearing loss 59, autosomal dominant nonsyndromic hearing loss 3B, autosomal dominant nonsyndromic hearing loss 2B, autosomal dominant nonsyndromic hearing loss 50, autosomal dominant nonsyndromic hearing loss 51, autosomal dominant nonsyndromic hearing loss 64, autosomal dominant nonsyndromic hearing loss 33, autosomal dominant nonsyndromic hearing loss 4B, autosomal dominant nonsyndromic hearing loss 56, autosomal dominant nonsyndromic hearing loss 54, autosomal dominant nonsyndromic hearing loss 58, autosomal dominant nonsyndromic hearing loss 67, autosomal dominant nonsyndromic hearing loss 40, autosomal dominant nonsyndromic hearing loss 69, autosomal dominant nonsyndromic hearing loss 68, autosomal dominant nonsyndromic hearing loss 70, autosomal dominant nonsyndromic hearing loss 66, hearing loss, autosomal dominant 74, hearing loss, autosomal dominant 77, hearing loss, autosomal dominant 81, hearing loss, autosomal dominant 82, hearing loss, autosomal dominant 83, hearing loss, autosomal dominant 84, hearing loss, autosomal dominant 80, hearing loss, autosomal dominant 37, hearing loss, autosomal dominant 75, hearing loss, autosomal dominant 76, hearing loss, autosomal dominant 71, hearing loss, autosomal dominant 72, hearing loss, autosomal dominant 73, hearing loss, autosomal dominant 34, with or without inflammation, hearing loss, autosomal dominant 78, hearing loss, autosomal dominant 79, hearing loss, autosomal dominant 85, hearing loss, autosomal dominant 86, hearing loss, autosomal dominant 87, hearing loss, autosomal dominant 88, hearing loss, autosomal dominant 89, hearing loss, autosomal dominant 90, autosomal dominant nonsyndromic hearing loss 91
Genetics & variants
GWAS landscape
No GWAS associations recorded — common-variant (GWAS) studies don’t cover this disease (typical for Mendelian / rare diseases). See the curated gene cohort and Mendelian overlap below.
Variant details and genetic-evidence tiers
ClinVar germline variants
600 retrieved; paginated sample, class counts are floors:
273 uncertain significance, 193 likely benign, 54 conflicting classifications of pathogenicity, 38 pathogenic, 18 benign/likely benign, 11 pathogenic/likely pathogenic, 7 likely pathogenic, 6 benign
| ClinVar | Variant (HGVS) | Gene | Classification | Review |
|---|---|---|---|---|
| 3243524 | NC_000016.9:g.(?2550259)(3154076_?)del | FLYWCH1 | Pathogenic | criteria provided, single submitter |
| 1029242 | NM_001199107.2(TBC1D24):c.965+2T>C | TBC1D24 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 1066340 | NM_001199107.2(TBC1D24):c.115G>C (p.Ala39Pro) | TBC1D24 | Pathogenic | criteria provided, single submitter |
| 1071941 | NM_001199107.2(TBC1D24):c.642_793del (p.Trp215fs) | TBC1D24 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 1072207 | NM_001199107.2(TBC1D24):c.715del (p.Val239fs) | TBC1D24 | Pathogenic | criteria provided, single submitter |
| 133246 | NM_001199107.2(TBC1D24):c.533C>T (p.Ser178Leu) | TBC1D24 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 1357131 | NM_001199107.2(TBC1D24):c.1397del (p.Pro466fs) | TBC1D24 | Pathogenic | criteria provided, single submitter |
| 1369893 | NM_001199107.2(TBC1D24):c.56del (p.Ile19fs) | TBC1D24 | Pathogenic | criteria provided, single submitter |
| 1378399 | NM_001199107.2(TBC1D24):c.979A>T (p.Lys327Ter) | TBC1D24 | Pathogenic | criteria provided, single submitter |
| 1397090 | NM_001199107.2(TBC1D24):c.1540C>T (p.Gln514Ter) | TBC1D24 | Pathogenic | criteria provided, single submitter |
| 1402576 | NC_000016.9:g.(?2546150)(2550959_?)del | TBC1D24 | Pathogenic | criteria provided, single submitter |
| 1451981 | NM_001199107.2(TBC1D24):c.1141dup (p.Arg381fs) | TBC1D24 | Pathogenic | criteria provided, single submitter |
| 1453407 | NM_001199107.2(TBC1D24):c.636G>A (p.Trp212Ter) | TBC1D24 | Pathogenic | criteria provided, single submitter |
| 1456664 | NM_001199107.2(TBC1D24):c.752del (p.Phe251fs) | TBC1D24 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 1459471 | NM_001199107.2(TBC1D24):c.806del (p.Ile269fs) | TBC1D24 | Pathogenic | criteria provided, single submitter |
| 1473155 | NM_001199107.2(TBC1D24):c.706G>A (p.Gly236Ser) | TBC1D24 | Pathogenic | criteria provided, single submitter |
| 183152 | NM_001199107.2(TBC1D24):c.119G>T (p.Arg40Leu) | TBC1D24 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 1966628 | NM_001199107.2(TBC1D24):c.1505dup (p.Ser503fs) | TBC1D24 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 1970211 | NM_001199107.2(TBC1D24):c.668_669delinsAA (p.Cys223Ter) | TBC1D24 | Pathogenic | criteria provided, single submitter |
| 2035641 | NM_001199107.2(TBC1D24):c.1574del (p.Gly525fs) | TBC1D24 | Pathogenic | criteria provided, single submitter |
| 207499 | NM_001199107.2(TBC1D24):c.457G>A (p.Glu153Lys) | TBC1D24 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 207503 | NM_001199107.2(TBC1D24):c.680G>T (p.Arg227Leu) | TBC1D24 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 207505 | NM_001199107.2(TBC1D24):c.845C>G (p.Pro282Arg) | TBC1D24 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 207507 | NM_001199107.2(TBC1D24):c.475del (p.Leu159fs) | TBC1D24 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 2101220 | NM_001199107.2(TBC1D24):c.1402_1409dup (p.Ser472fs) | TBC1D24 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 2121170 | NM_001199107.2(TBC1D24):c.1488del (p.Met497fs) | TBC1D24 | Pathogenic | criteria provided, single submitter |
| 2127078 | NM_001199107.2(TBC1D24):c.270_286del (p.Pro91fs) | TBC1D24 | Pathogenic | criteria provided, single submitter |
| 2163597 | NM_001199107.2(TBC1D24):c.132G>A (p.Trp44Ter) | TBC1D24 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 2938575 | NM_001199107.2(TBC1D24):c.1078del (p.Arg360fs) | TBC1D24 | Pathogenic | criteria provided, single submitter |
| 2942773 | NM_001199107.2(TBC1D24):c.309dup (p.Tyr104fs) | TBC1D24 | Pathogenic | criteria provided, single submitter |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 21 · Orphanet: 9 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
GenCC gene–disease validity (cohort genes)
the Disease column is the GenCC-asserted condition — a cohort gene’s strongest validity may be for a related predisposition syndrome.
| Gene | Classification | Inheritance | Disease | Records |
|---|---|---|---|---|
| TBC1D24 | Strong | Autosomal dominant | autosomal dominant nonsyndromic hearing loss 65 | 21 |
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|---|---|
| TBC1D24 | Orphanet:163727 | Rolandic epilepsy-paroxysmal exercise-induced dystonia-writer’s cramp syndrome |
| TBC1D24 | Orphanet:293181 | Epilepsy of infancy with migrating focal seizures |
| TBC1D24 | Orphanet:352582 | Familial infantile myoclonic epilepsy |
| TBC1D24 | Orphanet:352587 | Focal epilepsy-intellectual disability-cerebro-cerebellar malformation |
| TBC1D24 | Orphanet:352596 | Progressive myoclonic epilepsy with dystonia |
| TBC1D24 | Orphanet:79500 | DOORS syndrome |
| TBC1D24 | Orphanet:90635 | Rare autosomal dominant non-syndromic sensorineural deafness type DFNA |
| TBC1D24 | Orphanet:90636 | Rare autosomal recessive non-syndromic sensorineural deafness type DFNB |
| CCNF | Orphanet:803 | Amyotrophic lateral sclerosis |
Cohort genes → proteins
5 cohort genes, 5 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|---|
| multi_evidence | 5 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|---|---|---|---|---|
| TBC1D24 | HGNC:29203 | ENSG00000162065 | Q9ULP9 | TBC1 domain family member 24 | gencc,clinvar |
| CCNF | HGNC:1591 | ENSG00000162063 | P41002 | Cyclin-F | clinvar |
| MLST8 | HGNC:24825 | ENSG00000167965 | Q9BVC4 | Target of rapamycin complex subunit LST8 | clinvar |
| FLYWCH1 | HGNC:25404 | ENSG00000059122 | Q4VC44 | FLYWCH-type zinc finger-containing protein 1 | clinvar |
| EME2 | HGNC:27289 | ENSG00000197774 | A4GXA9 | Structure-specific endonuclease subunit EME2 | clinvar |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|---|---|
| TBC1D24 | TBC1 domain family member 24 | May act as a GTPase-activating protein for Rab family protein(s). |
| CCNF | Cyclin-F | Substrate recognition component of a SCF (SKP1-CUL1-F-box protein) E3 ubiquitin-protein ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. |
| MLST8 | Target of rapamycin complex subunit LST8 | Subunit of both mTORC1 and mTORC2, which regulates cell growth and survival in response to nutrient and hormonal signals. mTORC1 is activated in response to growth factors or amino acids. |
| FLYWCH1 | FLYWCH-type zinc finger-containing protein 1 | Transcription cofactor. |
| EME2 | Structure-specific endonuclease subunit EME2 | Non-catalytic subunit of the structure-specific, heterodimeric DNA endonuclease MUS81-EME2 which is involved in the maintenance of genome stability. |
Protein-family classification
Druggable: 0 · Difficult: 2 · Unknown: 3 · Druggable fraction: 0.0
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|---|---|---|
| Scaffold/PPI | 1 | 3.5× | 0.608 |
| Transcription factor | 1 | 1.6× | 0.608 |
| Other/Unknown | 3 | 1.1× | 0.608 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|---|---|---|---|
| TBC1D24 | Other/Unknown | no | Rab-GAP-TBC_dom, TLDc_dom, Rab-GAP_TBC_sf | |
| CCNF | Other/Unknown | no | F-box_dom, Cyclin_C-dom, Cyclin_N | |
| MLST8 | Scaffold/PPI | no | WD40_rpt, Quinoprotein_ADH-like_sf, WD40/YVTN_repeat-like_dom_sf | |
| FLYWCH1 | Transcription factor | no | Znf_FLYWCH, FLYWCH_N, FWCH1/FWCH2 | |
| EME2 | Other/Unknown | no | ERCC4_domain, Mms4/EME1/EME2, EME1/EME2_C |
Expression context
Cohort genes with no expression data: 0.
5 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 0 |
| broad (>20) | 5 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|---|
| cerebellar hemisphere | 3 |
| right hemisphere of cerebellum | 3 |
| cerebellar cortex | 2 |
| Brodmann (1909) area 23 | 1 |
| middle temporal gyrus | 1 |
| parotid gland | 1 |
| hair follicle | 1 |
| olfactory bulb | 1 |
| type B pancreatic cell | 1 |
| oviduct epithelium | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|---|---|---|---|
| TBC1D24 | 227 | ubiquitous | marker | parotid gland, Brodmann (1909) area 23, middle temporal gyrus |
| CCNF | 213 | ubiquitous | marker | type B pancreatic cell, olfactory bulb, hair follicle |
| MLST8 | 263 | ubiquitous | marker | right hemisphere of cerebellum, cerebellar hemisphere, cerebellar cortex |
| FLYWCH1 | 249 | ubiquitous | marker | right hemisphere of cerebellum, cerebellar hemisphere, cerebellar cortex |
| EME2 | 231 | ubiquitous | marker | oviduct epithelium, right hemisphere of cerebellum, cerebellar hemisphere |
Protein interactions among cohort
Intra-cohort edges: 0.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|---|
| CCNF | 6,626 |
| MLST8 | 2,702 |
| EME2 | 1,255 |
| TBC1D24 | 1,016 |
| FLYWCH1 | 826 |
Structural data
PDB: 4 · AlphaFold-only: 1 · No structure: 0
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|---|---|
| MLST8 | Q9BVC4 | 45 |
| CCNF | P41002 | 1 |
| FLYWCH1 | Q4VC44 | 1 |
| EME2 | A4GXA9 | 1 |
AlphaFold-only cohort genes (top 30 by pLDDT)
| Symbol | UniProt | pLDDT |
|---|---|---|
| TBC1D24 | Q9ULP9 | 84.46 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 52. Enrichment computed across 5 evidence-associated genes (4 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 4 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| Dengue virus modulates apoptosis | 1 | 178.4× | 0.038 | MLST8 |
| Regulation of TP53 Expression and Degradation | 1 | 129.8× | 0.038 | MLST8 |
| mTORC1-mediated signalling | 1 | 119.0× | 0.038 | MLST8 |
| Regulation of T cell activation by CD28 family | 1 | 105.7× | 0.038 | MLST8 |
| Constitutive Signaling by AKT1 E17K in Cancer | 1 | 105.7× | 0.038 | MLST8 |
| VEGFR2 mediated vascular permeability | 1 | 102.0× | 0.038 | MLST8 |
| Cellular response to heat stress | 1 | 98.5× | 0.038 | MLST8 |
| Energy dependent regulation of mTOR by LKB1-AMPK | 1 | 98.5× | 0.038 | MLST8 |
| CD28 dependent PI3K/Akt signaling | 1 | 98.5× | 0.038 | MLST8 |
| Co-stimulation by CD28 | 1 | 95.2× | 0.038 | MLST8 |
| PI3K/AKT Signaling in Cancer | 1 | 92.1× | 0.038 | MLST8 |
| Rab regulation of trafficking | 1 | 92.1× | 0.038 | TBC1D24 |
| HSF1-dependent transactivation | 1 | 79.3× | 0.038 | MLST8 |
| Resolution of D-loop Structures through Holliday Junction Intermediates | 1 | 75.1× | 0.038 | EME2 |
| Response of endothelial cells to shear stress | 1 | 75.1× | 0.038 | MLST8 |
| Regulation of TP53 Degradation | 1 | 73.2× | 0.038 | MLST8 |
| Fanconi Anemia Pathway | 1 | 69.6× | 0.038 | EME2 |
| MTOR signalling | 1 | 66.4× | 0.038 | MLST8 |
| TBC/RABGAPs | 1 | 64.9× | 0.038 | TBC1D24 |
| Cellular responses to mechanical stimuli | 1 | 64.9× | 0.038 | MLST8 |
| Adaptive Immune System | 2 | 14.9× | 0.038 | CCNF, MLST8 |
| PTEN Regulation | 1 | 57.1× | 0.041 | MLST8 |
| Signaling by VEGF | 1 | 54.9× | 0.041 | MLST8 |
| Amino acids regulate mTORC1 | 1 | 50.1× | 0.043 | MLST8 |
| Regulation of PTEN gene transcription | 1 | 44.6× | 0.046 | MLST8 |
| Cellular response to starvation | 1 | 41.4× | 0.047 | MLST8 |
| High laminar flow shear stress activates signaling by PIEZO1 and PECAM1:CDH5:KDR in endothelial cells | 1 | 40.2× | 0.047 | MLST8 |
| Autophagy | 1 | 37.1× | 0.050 | MLST8 |
| VEGFA-VEGFR2 Pathway | 1 | 34.8× | 0.051 | MLST8 |
| Regulation of TP53 Activity | 1 | 33.2× | 0.051 | MLST8 |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 5 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| re-entry into mitotic cell cycle | 1 | 1123.5× | 0.015 | CCNF |
| negative regulation of cellular response to oxidative stress | 1 | 842.6× | 0.015 | TBC1D24 |
| positive regulation of pentose-phosphate shunt | 1 | 842.6× | 0.015 | MLST8 |
| negative regulation of centrosome duplication | 1 | 674.1× | 0.015 | CCNF |
| TORC2 signaling | 1 | 306.4× | 0.019 | MLST8 |
| cellular response to osmotic stress | 1 | 240.7× | 0.019 | MLST8 |
| positive regulation of neuron migration | 1 | 198.3× | 0.019 | TBC1D24 |
| resolution of meiotic recombination intermediates | 1 | 187.2× | 0.019 | EME2 |
| mitotic intra-S DNA damage checkpoint signaling | 1 | 187.2× | 0.019 | EME2 |
| positive regulation of lipid biosynthetic process | 1 | 177.4× | 0.019 | MLST8 |
| positive regulation of dendrite morphogenesis | 1 | 177.4× | 0.019 | TBC1D24 |
| TORC1 signaling | 1 | 160.5× | 0.019 | MLST8 |
| TOR signaling | 1 | 153.2× | 0.019 | MLST8 |
| DNA damage response | 2 | 21.4× | 0.019 | MLST8, FLYWCH1 |
| positive regulation of glycolytic process | 1 | 134.8× | 0.020 | MLST8 |
| positive regulation of excitatory postsynaptic potential | 1 | 105.3× | 0.021 | TBC1D24 |
| positive regulation of TOR signaling | 1 | 99.1× | 0.021 | MLST8 |
| cellular response to nutrient levels | 1 | 93.6× | 0.021 | MLST8 |
| axon development | 1 | 91.1× | 0.021 | TBC1D24 |
| placenta development | 1 | 88.7× | 0.021 | CCNF |
| synaptic vesicle endocytosis | 1 | 86.4× | 0.021 | TBC1D24 |
| replication fork processing | 1 | 84.3× | 0.021 | EME2 |
| dendrite development | 1 | 78.4× | 0.022 | TBC1D24 |
| SCF-dependent proteasomal ubiquitin-dependent protein catabolic process | 1 | 74.9× | 0.022 | CCNF |
| positive regulation of actin filament polymerization | 1 | 66.1× | 0.024 | MLST8 |
| telomere maintenance | 1 | 53.5× | 0.028 | EME2 |
| negative regulation of autophagy | 1 | 51.9× | 0.028 | MLST8 |
| double-strand break repair | 1 | 40.6× | 0.034 | EME2 |
| G1/S transition of mitotic cell cycle | 1 | 40.1× | 0.034 | CCNF |
| positive regulation of cell growth | 1 | 36.6× | 0.036 | MLST8 |
Therapeutics
Drug target analysis
Approved (phase 4): 1 · Phase ≥3: 1 · Phased (≥1): 1 · Undrugged: 4
Druggability breadth: 1 of 5 evidence-associated genes (20%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Genes with an approved drug
The molecule shown is one approved compound that hits the gene — not necessarily a drug of choice or one indicated for this disease.
| Symbol | Example approved molecule |
|---|---|
| MLST8 | EVEROLIMUS |
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|---|---|
| MLST8 | 13 | 4 |
| TBC1D24 | 0 | 0 |
| CCNF | 0 | 0 |
| FLYWCH1 | 0 | 0 |
| EME2 | 0 | 0 |
Drugs targeting cohort genes (top 30)
| Molecule | Max phase | Targets in cohort |
|---|---|---|
| EVEROLIMUS | 4 | MLST8 |
| SIROLIMUS | 4 | MLST8 |
| DACTOLISIB | 3 | MLST8 |
| OMIPALISIB | 2 | MLST8 |
| VISTUSERTIB | 2 | MLST8 |
| OSI-027 | 2 | MLST8 |
| SAPANISERTIB | 2 | MLST8 |
| ONATASERTIB | 2 | MLST8 |
| CC-115 | 2 | MLST8 |
| PAXALISIB | 2 | MLST8 |
| BIMIRALISIB | 2 | MLST8 |
| AZD-8055 | 1 | MLST8 |
| RMC-5552 | 1 | MLST8 |
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 0.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|---|---|
| MLST8 | 275 | Binding:275 |
Cohort genes with high screening signal
≥100 ChEMBL assays — a studied-ness signal; see Therapeutics for approved-drug status.
| Symbol | ChEMBL assays |
|---|---|
| MLST8 | 275 |
Pharmacogenomics
Cohort genes with a PharmGKB record: 5; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Chemical tractability of cohort targets
13 approved/phased compounds have measured bioactivity against a cohort gene (and aren’t yet in disease-level trials). This is a research / tractability signal, NOT a therapeutic recommendation — a bioactivity row often reflects off-target or screening binding (e.g. promiscuous kinase inhibitors against a cohort kinase), implying no disease mechanism.
| Compound | Max phase | Cohort target (bioactivity) |
|---|---|---|
| EVEROLIMUS | 4 | MLST8 |
| SIROLIMUS | 4 | MLST8 |
| DACTOLISIB | 3 | MLST8 |
| OMIPALISIB | 2 | MLST8 |
| VISTUSERTIB | 2 | MLST8 |
| OSI-027 | 2 | MLST8 |
| SAPANISERTIB | 2 | MLST8 |
| ONATASERTIB | 2 | MLST8 |
| CC-115 | 2 | MLST8 |
| PAXALISIB | 2 | MLST8 |
| BIMIRALISIB | 2 | MLST8 |
| AZD-8055 | 1 | MLST8 |
| RMC-5552 | 1 | MLST8 |
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|---|---|---|
| A | Approved (phase 4 drug) | 1 | MLST8 |
| B | Phased (≥1) drug, not yet approved | 0 | |
| C | Druggable family + PDB, no drug | 0 | |
| D | Druggable family + AlphaFold only, no drug | 0 | |
| E | Difficult family or no structure, no drug | 4 | TBC1D24, CCNF, FLYWCH1, EME2 |
Undrugged target profiles
4 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
| Symbol | ChEMBL assays | Drugged partners (top 3) |
|---|---|---|
| TBC1D24 | 0 | — |
| CCNF | 0 | — |
| FLYWCH1 | 0 | — |
| EME2 | 0 | — |
Clinical trials & evidence
Clinical trials
Clinical trials: 0.