Autosomal dominant optic atrophy, classic form
diseaseOn this page
Also known as autosomal dominant optic atrophy, Kjer typeKjer optic atrophyOAKOPA1optic atrophy 1optic atrophy type 1
Summary
Autosomal dominant optic atrophy, classic form (MONDO:0008134) is a disease caused by OPA1 (GenCC Definitive), with 4 cohort genes and 3 clinical trials.
At a glance
- Prevalence: 1-5 / 10 000 (Denmark) [Orphanet-validated]
- Causal gene: OPA1 (GenCC Definitive)
- Cohort genes: 4
- ClinVar variants: 221
- Phenotypes (HPO): 44
- Clinical trials: 3
Clinical features
Epidemiology
Prevalence records
4 prevalence record(s), Orphanet:
| Type | Class | Value | Geography | Validation |
|---|---|---|---|---|
| Point prevalence | 1-5 / 10 000 | 10 | Denmark | Validated |
| Point prevalence | 1-9 / 100 000 | 2.86 | United Kingdom | Validated |
| Point prevalence | 6-9 / 10 000 | 83.33 | Specific population | Validated |
| Point prevalence | 1-9 / 100 000 | 2 | Worldwide | Not yet validated |
Signs & symptoms
Clinical features (HPO)
44 HPO clinical features (Orphanet curated; top 44 by frequency):
| HPO ID | Term | Frequency |
|---|---|---|
| HP:0000505 | Visual impairment | Very frequent (80-99%) |
| HP:0000648 | Optic atrophy | Very frequent (80-99%) |
| HP:0000407 | Sensorineural hearing impairment | Frequent (30-79%) |
| HP:0000551 | Color vision defect | Frequent (30-79%) |
| HP:0000602 | Ophthalmoplegia | Frequent (30-79%) |
| HP:0007141 | Sensorimotor neuropathy | Frequent (30-79%) |
| HP:0012511 | Temporal optic disc pallor | Frequent (30-79%) |
| HP:0025514 | Morning glory anomaly | Frequent (30-79%) |
| HP:0030515 | Moderately reduced visual acuity | Frequent (30-79%) |
| HP:0000508 | Ptosis | Occasional (5-29%) |
| HP:0000603 | Central scotoma | Occasional (5-29%) |
| HP:0001251 | Ataxia | Occasional (5-29%) |
| HP:0001288 | Gait disturbance | Occasional (5-29%) |
| HP:0003198 | Myopathy | Occasional (5-29%) |
| HP:0000135 | Hypogonadism | Very rare (<1-4%) |
| HP:0000518 | Cataract | Very rare (<1-4%) |
| HP:0000639 | Nystagmus | Very rare (<1-4%) |
| HP:0000726 | Dementia | Very rare (<1-4%) |
| HP:0000738 | Hallucinations | Very rare (<1-4%) |
| HP:0000819 | Diabetes mellitus | Very rare (<1-4%) |
| HP:0000821 | Hypothyroidism | Very rare (<1-4%) |
| HP:0001250 | Seizure | Very rare (<1-4%) |
| HP:0001257 | Spasticity | Very rare (<1-4%) |
| HP:0001258 | Spastic paraplegia | Very rare (<1-4%) |
| HP:0001263 | Global developmental delay | Very rare (<1-4%) |
| HP:0001269 | Hemiparesis | Very rare (<1-4%) |
| HP:0001272 | Cerebellar atrophy | Very rare (<1-4%) |
| HP:0001284 | Areflexia | Very rare (<1-4%) |
| HP:0001761 | Pes cavus | Very rare (<1-4%) |
| HP:0001972 | Macrocytic anemia | Very rare (<1-4%) |
| HP:0002015 | Dysphagia | Very rare (<1-4%) |
| HP:0002076 | Migraine | Very rare (<1-4%) |
| HP:0002135 | Basal ganglia calcification | Very rare (<1-4%) |
| HP:0002518 | Abnormal periventricular white matter morphology | Very rare (<1-4%) |
| HP:0003202 | Skeletal muscle atrophy | Very rare (<1-4%) |
| HP:0003326 | Myalgia | Very rare (<1-4%) |
| HP:0003691 | Scapular winging | Very rare (<1-4%) |
| HP:0007366 | Atrophy/Degeneration affecting the brainstem | Very rare (<1-4%) |
| HP:0007371 | Corpus callosum atrophy | Very rare (<1-4%) |
| HP:0009921 | Duane anomaly | Very rare (<1-4%) |
| HP:0011968 | Feeding difficulties | Very rare (<1-4%) |
| HP:0012378 | Fatigue | Very rare (<1-4%) |
| HP:0030319 | Weakness of facial musculature | Very rare (<1-4%) |
| HP:0100543 | Cognitive impairment | Very rare (<1-4%) |
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | autosomal dominant optic atrophy, classic form |
| Mondo ID | MONDO:0008134 |
| OMIM | 165500 |
| Orphanet | 98673 |
| DOID | DOID:0111441 |
| SNOMED CT | 717336005 |
| UMLS | C0338508 |
| MedGen | 137902 |
| GARD | 0009890 |
| Is cancer (heuristic) | no |
Also known as: autosomal dominant optic atrophy, Kjer type · Kjer optic atrophy · OAK · OPA1 · optic atrophy 1 · optic atrophy type 1
Data availability: 221 ClinVar variants · 3 GenCC gene-disease records · 8 cell lines.
Disease family
Classification path: disease › human disease › disease by developmental or physiological process › metabolic disease › developmental anomaly of metabolic origin › inborn mitochondrial metabolism disorder › mitochondrial oxidative phosphorylation disorder › autosomal dominant optic atrophy, classic form
Related subtypes (47): mitochondrial respiratory chain complex deficiency, combined oxidative phosphorylation deficiency, myopathy, lactic acidosis, and sideroblastic anemia, optic atrophy 3, Leigh syndrome, mitochondrial non-syndromic sensorineural hearing loss, maternally-inherited diabetes and deafness, chronic diarrhea with villous atrophy, Kearns-Sayre syndrome, Leber hereditary optic neuropathy, NARP syndrome, deafness, aminoglycoside-induced, hereditary spastic paraplegia 7, spinocerebellar ataxia type 28, leukoencephalopathy with brain stem and spinal cord involvement-high lactate syndrome, spastic ataxia 3, pontocerebellar hypoplasia type 6, autosomal recessive optic atrophy, OPA7 type, acute infantile liver failure due to synthesis defect of mtDNA-encoded proteins, congenital cataract-progressive muscular hypotonia-hearing loss-developmental delay syndrome, spastic ataxia 4, hyperuricemia-pulmonary hypertension-renal failure-alkalosis syndrome, hereditary spastic paraplegia 55, cataract-growth hormone deficiency-sensory neuropathy-sensorineural hearing loss-skeletal dysplasia syndrome, Charcot-Marie-Tooth disease recessive intermediate D, autosomal dominant mitochondrial myopathy with exercise intolerance, Charcot-Marie-Tooth disease type 4K, hydrops-lactic acidosis-sideroblastic anemia-multisystemic failure syndrome, hereditary spastic paraplegia 77, fatal infantile encephalocardiomyopathy, FASTKD2-related infantile mitochondrial encephalomyopathy, autosomal dominant optic atrophy and peripheral neuropathy, ataxia neuropathy spectrum, maternally-inherited mitochondrial dystonia, Perrault syndrome, hypertrophic cardiomyopathy and renal tubular disease due to mitochondrial DNA mutation, adult-onset chronic progressive external ophthalmoplegia with mitochondrial myopathy, mitochondrial DNA maintenance syndrome, coenzyme Q10 deficiency, mitochondrial DNA depletion syndrome, periodic paralysis with later-onset distal motor neuropathy, non-progressive predominantly posterior cavitating leukoencephalopathy with peripheral neuropathy, Zellweger-like syndrome without peroxisomal anomalies, maternally-inherited progressive external ophthalmoplegia, Leber plus disease, encephalopathy due to mitochondrial and peroxisomal fission defect, severe neonatal lactic acidosis due to NFS1-ISD11 complex deficiency
Genetics & variants
GWAS landscape
No GWAS associations recorded — common-variant (GWAS) studies don’t cover this disease (typical for Mendelian / rare diseases). See the curated gene cohort and Mendelian overlap below.
Variant details and genetic-evidence tiers
ClinVar germline variants
221 retrieved; paginated sample, class counts are floors:
66 uncertain significance, 36 pathogenic, 33 benign, 32 conflicting classifications of pathogenicity, 22 likely pathogenic, 16 pathogenic/likely pathogenic, 10 benign/likely benign, 4 not provided, 2 likely benign
| ClinVar | Variant (HGVS) | Gene | Classification | Review |
|---|---|---|---|---|
| 1709100 | NM_130837.3(OPA1):c.1852C>T (p.Gln618Ter) | LOC126806913 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 3233374 | NM_130837.3(OPA1):c.1870+1G>C | LOC126806913 | Pathogenic | criteria provided, single submitter |
| 1213866 | NM_130837.3(OPA1):c.2293A>T (p.Lys765Ter) | OPA1 | Pathogenic | criteria provided, single submitter |
| 1526127 | NM_130837.3(OPA1):c.357del (p.Phe119fs) | OPA1 | Pathogenic | criteria provided, single submitter |
| 1675202 | NM_130837.3(OPA1):c.2686del (p.Tyr896fs) | OPA1 | Pathogenic | criteria provided, single submitter |
| 1679213 | NM_130837.3(OPA1):c.1377+1G>T | OPA1 | Pathogenic | criteria provided, single submitter |
| 1691850 | NM_130837.3(OPA1):c.2051C>G (p.Ser684Ter) | OPA1 | Pathogenic/Likely pathogenic | criteria provided, single submitter |
| 1708159 | NM_130837.3(OPA1):c.1606_1608+10delinsCAGTCCACAAATCT | OPA1 | Pathogenic | criteria provided, single submitter |
| 1709891 | NM_130837.3(OPA1):c.70dup (p.Ile24fs) | OPA1 | Pathogenic | criteria provided, single submitter |
| 1710214 | NM_130837.3(OPA1):c.2750dup (p.Tyr917Ter) | OPA1 | Pathogenic | no assertion criteria provided |
| 195896 | NM_130837.3(OPA1):c.2734C>T (p.Arg912Ter) | OPA1 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 198219 | NM_130837.3(OPA1):c.800_801del (p.Lys267fs) | OPA1 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 216979 | NM_130837.3(OPA1):c.2296C>T (p.Arg766Ter) | OPA1 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 2203476 | NM_130837.3(OPA1):c.1038TGT[1] (p.Val349del) | OPA1 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 2203477 | NM_130837.3(OPA1):c.1099C>T (p.Arg367Ter) | OPA1 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 2571197 | NM_130837.3(OPA1):c.2869G>T (p.Glu957Ter) | OPA1 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 2627600 | NM_130837.3(OPA1):c.2778+1G>A | OPA1 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 2687786 | NM_130837.3(OPA1):c.2605del (p.Glu868_Ile869insTer) | OPA1 | Pathogenic | criteria provided, single submitter |
| 280006 | NM_130837.3(OPA1):c.1681+1G>T | OPA1 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 30461 | NM_130837.3(OPA1):c.1800C>G (p.Ser600Arg) | OPA1 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 3236000 | NM_130837.3(OPA1):c.2714dup (p.Asn906fs) | OPA1 | Pathogenic | criteria provided, single submitter |
| 3250086 | NM_130837.3(OPA1):c.1149+1_1149+5del | OPA1 | Pathogenic/Likely pathogenic | no assertion criteria provided |
| 3250149 | NM_130837.3(OPA1):c.2012+4_2012+7del | OPA1 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 3250177 | NM_130837.3(OPA1):c.1478A>G (p.Asp493Gly) | OPA1 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 431939 | NM_130837.3(OPA1):c.1035+5G>A | OPA1 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 431941 | NM_130837.3(OPA1):c.2362C>T (p.Arg788Ter) | OPA1 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 447898 | NM_130837.3(OPA1):c.2406del (p.Phe802fs) | OPA1 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 447904 | NM_130837.3(OPA1):c.868C>T (p.Arg290Ter) | OPA1 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 4819126 | NM_130837.3(OPA1):c.33-280_180del | OPA1 | Pathogenic | criteria provided, single submitter |
| 500848 | NM_130837.3(OPA1):c.1389dup (p.Gly464fs) | OPA1 | Pathogenic | criteria provided, multiple submitters, no conflicts |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 42 · Orphanet: 11 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
GenCC gene–disease validity (cohort genes)
the Disease column is the GenCC-asserted condition — a cohort gene’s strongest validity may be for a related predisposition syndrome.
| Gene | Classification | Inheritance | Disease | Records |
|---|---|---|---|---|
| MED12 | Definitive | Autosomal dominant | autosomal dominant optic atrophy, classic form | 21 |
| OPA1 | Definitive | Autosomal dominant | autosomal dominant optic atrophy, classic form | 11 |
| DNM1L | Strong | Autosomal dominant | optic atrophy 5 | 10 |
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|---|---|
| MED12 | Orphanet:1415 | Hardikar syndrome |
| MED12 | Orphanet:293707 | Blepharophimosis-intellectual disability syndrome, MKB type |
| MED12 | Orphanet:776 | Lujan-Fryns syndrome |
| MED12 | Orphanet:777 | X-linked non-syndromic intellectual disability |
| MED12 | Orphanet:93932 | FG syndrome type 1 |
| OPA1 | Orphanet:1215 | Autosomal dominant optic atrophy plus syndrome |
| OPA1 | Orphanet:1239 | Behr syndrome |
| OPA1 | Orphanet:98673 | Autosomal dominant optic atrophy, classic form |
| DNM1L | Orphanet:330050 | DNM1L-related encephalopathy due to mitochondrial and peroxisomal fission defect |
| DNM1L | Orphanet:98673 | Autosomal dominant optic atrophy, classic form |
| ATP13A3 | Orphanet:275777 | Heritable pulmonary arterial hypertension |
Cohort genes → proteins
4 cohort genes, 4 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|---|
| multi_evidence | 4 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|---|---|---|---|---|
| MED12 | HGNC:11957 | ENSG00000184634 | Q93074 | Mediator of RNA polymerase II transcription subunit 12 | gencc,clinvar |
| OPA1 | HGNC:8140 | ENSG00000198836 | O60313 | Dynamin-like GTPase OPA1, mitochondrial | gencc,clinvar |
| DNM1L | HGNC:2973 | ENSG00000087470 | O00429 | Dynamin-1-like protein | gencc |
| ATP13A3 | HGNC:24113 | ENSG00000133657 | Q9H7F0 | Polyamine-transporting ATPase 13A3 | clinvar |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|---|---|
| MED12 | Mediator of RNA polymerase II transcription subunit 12 | Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. |
| OPA1 | Dynamin-like GTPase OPA1, mitochondrial | Dynamin-related GTPase that is essential for normal mitochondrial morphology by mediating fusion of the mitochondrial inner membranes, regulating cristae morphology and maintaining respiratory chain function. |
| DNM1L | Dynamin-1-like protein | Functions in mitochondrial and peroxisomal division. |
| ATP13A3 | Polyamine-transporting ATPase 13A3 | ATP-driven pump involved in endocytosis-dependent polyamine transport. |
Protein-family classification
Druggable: 2 · Difficult: 1 · Unknown: 1 · Druggable fraction: 0.5
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|---|---|---|
| Enzyme (other) | 2 | 6.0× | 0.112 |
| Transcription factor | 1 | 2.1× | 0.605 |
| Other/Unknown | 1 | 0.5× | 0.962 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|---|---|---|---|
| MED12 | Other/Unknown | no | Mediator_Med12, Mediator_Med12_catenin-bd, Mediator_Med12_LCEWAV | |
| OPA1 | Enzyme (other) | yes | 3.6.5.5 | Dynamin_GTPase, Dynamin, P-loop_NTPase |
| DNM1L | Enzyme (other) | yes | 3.6.5.5 | Dynamin_stalk, Dynamin_GTPase, GED |
| ATP13A3 | Transcription factor | no | P_typ_ATPase, ATPase_P-typ_cation-transptr_N, P-type_TPase_V |
Expression context
Cohort genes with no expression data: 0.
4 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 0 |
| broad (>20) | 4 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|---|
| left ovary | 1 |
| right adrenal gland | 1 |
| right adrenal gland cortex | 1 |
| adrenal tissue | 1 |
| calcaneal tendon | 1 |
| endothelial cell | 1 |
| lateral nuclear group of thalamus | 1 |
| sperm | 1 |
| substantia nigra pars compacta | 1 |
| amniotic fluid | 1 |
| decidua | 1 |
| secondary oocyte | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|---|---|---|---|
| MED12 | 281 | ubiquitous | marker | right adrenal gland cortex, right adrenal gland, left ovary |
| OPA1 | 288 | ubiquitous | marker | adrenal tissue, calcaneal tendon, endothelial cell |
| DNM1L | 295 | ubiquitous | marker | lateral nuclear group of thalamus, substantia nigra pars compacta, sperm |
| ATP13A3 | 291 | ubiquitous | marker | decidua, secondary oocyte, amniotic fluid |
Protein interactions among cohort
Intra-cohort edges: 0.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|---|
| DNM1L | 4,801 |
| MED12 | 3,322 |
| OPA1 | 2,630 |
| ATP13A3 | 1,870 |
Structural data
PDB: 3 · AlphaFold-only: 1 · No structure: 0
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|---|---|
| OPA1 | O60313 | 11 |
| DNM1L | O00429 | 11 |
| MED12 | Q93074 | 3 |
AlphaFold-only cohort genes (top 30 by pLDDT)
| Symbol | UniProt | pLDDT |
|---|---|---|
| ATP13A3 | Q9H7F0 | 77.96 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 23. Enrichment computed across 4 evidence-associated genes (3 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 3 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| Regulation of Apoptosis | 1 | 634.4× | 0.036 | OPA1 |
| Apoptotic execution phase | 1 | 158.6× | 0.053 | DNM1L |
| Epigenetic regulation of adipogenesis genes by MLL3 and MLL4 complexes | 1 | 71.8× | 0.053 | MED12 |
| Epigenetic regulation of gene expression by MLL3 and MLL4 complexes | 1 | 65.6× | 0.053 | MED12 |
| Respiratory Syncytial Virus Infection Pathway | 1 | 65.6× | 0.053 | MED12 |
| RSV-host interactions | 1 | 52.1× | 0.053 | MED12 |
| Adipogenesis | 1 | 52.1× | 0.053 | MED12 |
| Epigenetic regulation by WDR5-containing histone modifying complexes | 1 | 51.4× | 0.053 | MED12 |
| Regulation of lipid metabolism by PPARalpha | 1 | 47.0× | 0.053 | MED12 |
| Transcriptional regulation of white adipocyte differentiation | 1 | 43.3× | 0.053 | MED12 |
| Mitochondrial protein degradation | 1 | 38.1× | 0.054 | OPA1 |
| PPARA activates gene expression | 1 | 31.5× | 0.060 | MED12 |
| MLL4 and MLL3 complexes regulate expression of PPARG target genes in adipogenesis and hepatic steatosis | 1 | 27.6× | 0.063 | MED12 |
| Epigenetic regulation of gene expression | 1 | 23.8× | 0.068 | MED12 |
| Metabolism of lipids | 1 | 10.5× | 0.136 | MED12 |
| Viral Infection Pathways | 1 | 10.3× | 0.136 | MED12 |
| Infectious disease | 1 | 8.3× | 0.157 | MED12 |
| RNA Polymerase II Transcription | 1 | 7.5× | 0.163 | MED12 |
| Gene expression (Transcription) | 1 | 6.0× | 0.192 | MED12 |
| Generic Transcription Pathway | 1 | 5.0× | 0.212 | MED12 |
| Developmental Biology | 1 | 4.8× | 0.212 | MED12 |
| Disease | 1 | 4.4× | 0.222 | MED12 |
| Metabolism | 1 | 3.9× | 0.237 | MED12 |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 4 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| peroxisome fission | 2 | 766.0× | 1e-04 | OPA1, DNM1L |
| mitochondrial fission | 2 | 526.6× | 1e-04 | OPA1, DNM1L |
| protein complex oligomerization | 2 | 337.0× | 2e-04 | OPA1, DNM1L |
| neural tube closure | 2 | 93.6× | 0.002 | MED12, OPA1 |
| mitochondrial inner membrane fusion | 1 | 4213.0× | 0.002 | OPA1 |
| mitochondrion organization | 2 | 75.9× | 0.002 | OPA1, DNM1L |
| mitochondrial membrane fission | 1 | 2106.5× | 0.003 | DNM1L |
| regulation of ATP metabolic process | 1 | 2106.5× | 0.003 | DNM1L |
| axis elongation involved in somitogenesis | 1 | 1404.3× | 0.003 | MED12 |
| membrane tubulation | 1 | 1404.3× | 0.003 | OPA1 |
| regulation of peroxisome organization | 1 | 1404.3× | 0.003 | DNM1L |
| polyamine transmembrane transport | 1 | 1053.2× | 0.004 | ATP13A3 |
| mitocytosis | 1 | 702.2× | 0.006 | DNM1L |
| intracellular distribution of mitochondria | 1 | 601.9× | 0.006 | DNM1L |
| positive regulation of T-helper 17 cell lineage commitment | 1 | 526.6× | 0.007 | OPA1 |
| embryonic neurocranium morphogenesis | 1 | 468.1× | 0.007 | MED12 |
| axonal transport of mitochondrion | 1 | 351.1× | 0.008 | OPA1 |
| mitochondrial fragmentation involved in apoptotic process | 1 | 351.1× | 0.008 | DNM1L |
| protein localization to mitochondrion | 1 | 324.1× | 0.009 | DNM1L |
| regulation of mitophagy | 1 | 300.9× | 0.009 | DNM1L |
| GTP metabolic process | 1 | 280.9× | 0.009 | OPA1 |
| Schwann cell development | 1 | 263.3× | 0.009 | MED12 |
| cristae formation | 1 | 263.3× | 0.009 | OPA1 |
| inner mitochondrial membrane organization | 1 | 210.7× | 0.009 | OPA1 |
| mitochondrial fusion | 1 | 210.7× | 0.009 | OPA1 |
| negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway | 1 | 210.7× | 0.009 | OPA1 |
| negative regulation of release of cytochrome c from mitochondria | 1 | 200.6× | 0.009 | OPA1 |
| embryonic brain development | 1 | 200.6× | 0.009 | MED12 |
| heart contraction | 1 | 191.5× | 0.009 | DNM1L |
| positive regulation of mitochondrial fission | 1 | 191.5× | 0.009 | DNM1L |
Therapeutics
Drug target analysis
Approved (phase 4): 1 · Phase ≥3: 1 · Phased (≥1): 2 · Undrugged: 2
Druggability breadth: 3 of 4 evidence-associated genes (75%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Genes with an approved drug
The molecule shown is one approved compound that hits the gene — not necessarily a drug of choice or one indicated for this disease.
| Symbol | Example approved molecule |
|---|---|
| OPA1 | MOMELOTINIB |
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|---|---|
| OPA1 | 2 | 4 |
| MED12 | 1 | 2 |
| DNM1L | 0 | 0 |
| ATP13A3 | 0 | 0 |
Drugs targeting cohort genes (top 30)
| Molecule | Max phase | Targets in cohort |
|---|---|---|
| MOMELOTINIB | 4 | OPA1 |
| TIVANTINIB | 3 | OPA1 |
| MOLIBRESIB | 2 | MED12 |
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 2.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|---|---|
| MED12 | 6 | Binding:6 |
| DNM1L | 4 | Binding:4 |
| OPA1 | 2 | Binding:2 |
Cohort enzymes (BRENDA EC)
| Symbol | EC numbers | Names |
|---|---|---|
| OPA1 | 3.6.5.5 | dynamin GTPase |
| DNM1L | 3.6.5.5 | dynamin GTPase |
Pharmacogenomics
Cohort genes with a PharmGKB record: 4; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Chemical tractability of cohort targets
3 approved/phased compounds have measured bioactivity against a cohort gene (and aren’t yet in disease-level trials). This is a research / tractability signal, NOT a therapeutic recommendation — a bioactivity row often reflects off-target or screening binding (e.g. promiscuous kinase inhibitors against a cohort kinase), implying no disease mechanism.
| Compound | Max phase | Cohort target (bioactivity) |
|---|---|---|
| MOMELOTINIB | 4 | OPA1 |
| TIVANTINIB | 3 | OPA1 |
| MOLIBRESIB | 2 | MED12 |
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|---|---|---|
| A | Approved (phase 4 drug) | 1 | OPA1 |
| B | Phased (≥1) drug, not yet approved | 1 | MED12 |
| C | Druggable family + PDB, no drug | 1 | DNM1L |
| D | Druggable family + AlphaFold only, no drug | 0 | |
| E | Difficult family or no structure, no drug | 1 | ATP13A3 |
Undrugged target profiles
2 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
| Symbol | ChEMBL assays | Drugged partners (top 3) |
|---|---|---|
| DNM1L | 4 | — |
| ATP13A3 | 0 | — |
Clinical trials & evidence
Clinical trials
Clinical trials: 3.
Phase distribution (across all retrieved trials)
| Phase | Trials |
|---|---|
| PHASE1/PHASE2 | 1 |
| PHASE1 | 1 |
| Not specified | 1 |
Top trials by phase / activity
| NCT | Phase | Status | Title |
|---|---|---|---|
| NCT06970106 | PHASE1/PHASE2 | RECRUITING | Safety of Single and Repeat Dose of PYC-001 Eye Injections in People With Autosomal Dominant Optic Atrophy (Myrtle) |
| NCT06461286 | PHASE1 | ACTIVE_NOT_RECRUITING | SAD of IVT PYC-001 in OPA1 Mutation-Associated Autosomal Dominant Optic Atrophy (Sundew) |
| NCT06140329 | Not specified | TERMINATED | Natural History of Autosomal Dominant Optic Atrophy (ADOA), Caused by OPA1 Mutation |