Breast-ovarian cancer, familial, susceptibility to, 3
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Also known as breast-ovarian cancer, familial, susceptibility to, type 3BROVCA3hereditary breast ovarian cancer syndrome caused by mutation in RAD51CRAD51C hereditary breast ovarian cancer syndrome
Summary
Breast-ovarian cancer, familial, susceptibility to, 3 (MONDO:0013253) is a cancer caused by RAD51C (GenCC Strong), with 4 cohort genes (3 CIViC-evidence somatic drivers; 897 ClinVar predisposition records).
At a glance
- Classification: Cancer
- Causal gene: RAD51C (GenCC Strong)
- Cohort genes: 4
- ClinVar variants: 897
Clinical features
No curated clinical features (Orphanet) for this disease.
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | breast-ovarian cancer, familial, susceptibility to, 3 |
| Mondo ID | MONDO:0013253 |
| OMIM | 613399 |
| UMLS | C3150659 |
| MedGen | 462009 |
| Is cancer (heuristic) | yes |
Also known as: breast-ovarian cancer, familial, susceptibility to, 3 · breast-ovarian cancer, familial, susceptibility to, type 3 · BROVCA3 · hereditary breast ovarian cancer syndrome caused by mutation in RAD51C · hereditary breast ovarian cancer syndrome caused by mutation in Rad51C · RAD51C hereditary breast ovarian cancer syndrome · Rad51C hereditary breast ovarian cancer syndrome
Data availability: 897 ClinVar variants · 3 GenCC gene-disease records.
Disease family
Classification path: disease susceptibility › inherited disease susceptibility › breast-ovarian cancer, familial, susceptibility to › breast-ovarian cancer, familial, susceptibility to, 3
Related subtypes (4): breast-ovarian cancer, familial, susceptibility to, 1, breast-ovarian cancer, familial, susceptibility to, 2, breast-ovarian cancer, familial, susceptibility to, 4, breast-ovarian cancer, familial, susceptibility to, 5
Genetics & variants
GWAS landscape
No GWAS associations recorded — common-variant (GWAS) studies don’t cover this disease (typical for Mendelian / rare diseases). See the curated gene cohort and Mendelian overlap below.
Variant details and genetic-evidence tiers
ClinVar germline variants
600 retrieved; paginated sample, class counts are floors:
132 conflicting classifications of pathogenicity, 130 benign/likely benign, 77 likely benign, 71 pathogenic, 64 uncertain significance, 50 benign, 41 pathogenic/likely pathogenic, 34 likely pathogenic, 1 not provided
| ClinVar | Variant (HGVS) | Gene | Classification | Review |
|---|---|---|---|---|
| 1072935 | NM_058216.3(RAD51C):c.612del (p.Leu205fs) | LOC129390903 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 1098903 | NM_058216.3(RAD51C):c.656T>A (p.Leu219Ter) | LOC129390903 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 1098905 | NM_058216.3(RAD51C):c.704dup (p.Val236fs) | LOC129390903 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 1098906 | NM_058216.3(RAD51C):c.705+1G>T | LOC129390903 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 142919 | NM_058216.3(RAD51C):c.701C>G (p.Ser234Ter) | LOC129390903 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 185074 | NM_058216.3(RAD51C):c.630T>G (p.Tyr210Ter) | LOC129390903 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 186604 | NM_058216.3(RAD51C):c.653_654del (p.Glu218fs) | LOC129390903 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 2021697 | NM_058216.3(RAD51C):c.615_618del (p.Ser206fs) | LOC129390903 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 230577 | NM_058216.3(RAD51C):c.705+1G>A | LOC129390903 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 232018 | NM_058216.3(RAD51C):c.622_623del (p.Ile208fs) | LOC129390903 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 2705286 | NM_058216.3(RAD51C):c.627T>G (p.Tyr209Ter) | LOC129390903 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 3148354 | NM_058216.3(RAD51C):c.616dup (p.Ser206fs) | LOC129390903 | Pathogenic | criteria provided, single submitter |
| 3148608 | NM_058216.3(RAD51C):c.699_702del (p.His233fs) | LOC129390903 | Pathogenic | criteria provided, single submitter |
| 372087 | NM_058216.3(RAD51C):c.145+2T>G | LOC130061310 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 1069820 | NM_058216.3(RAD51C):c.472dup (p.Ile158fs) | RAD51C | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 1069913 | NM_058216.3(RAD51C):c.961C>T (p.Gln321Ter) | RAD51C | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 1072950 | NM_058216.3(RAD51C):c.401T>G (p.Leu134Ter) | RAD51C | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 1073709 | NM_058216.3(RAD51C):c.795del (p.Ala266fs) | RAD51C | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 1075016 | NM_058216.3(RAD51C):c.905-1G>A | RAD51C | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 1098890 | NM_058216.3(RAD51C):c.-13_14del (p.Met1_Thr5del) | RAD51C | Pathogenic | criteria provided, single submitter |
| 1098898 | NM_058216.3(RAD51C):c.522_523insC (p.Ala175fs) | RAD51C | Pathogenic | criteria provided, single submitter |
| 1098899 | NM_058216.3(RAD51C):c.572-1G>T | RAD51C | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 1098902 | NM_058216.3(RAD51C):c.635del (p.Arg212fs) | RAD51C | Pathogenic | criteria provided, single submitter |
| 1098904 | NM_058216.3(RAD51C):c.672dup (p.Leu225fs) | RAD51C | Pathogenic | no assertion criteria provided |
| 1098907 | NM_058216.3(RAD51C):c.706-1G>A | RAD51C | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 1098911 | NM_058216.3(RAD51C):c.862del (p.Thr288fs) | RAD51C | Pathogenic | criteria provided, single submitter |
| 1098925 | NM_058216.3(RAD51C):c.706_837+2del | RAD51C | Pathogenic | criteria provided, single submitter |
| 1177647 | GRCh37/hg19 17q22(chr17:56809845-56811583) | RAD51C | Pathogenic | criteria provided, single submitter |
| 1177648 | NM_058216.3:c.1_705del | RAD51C | Pathogenic | criteria provided, single submitter |
| 1177649 | NM_058216.3(RAD51C):c.405_571del | RAD51C | Pathogenic | criteria provided, single submitter |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 10 · Orphanet: 25 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
Somatic driver evidence (intOGen + CIViC, cohort fanout)
| Gene | intOGen role | Cancer types | CIViC |
|---|---|---|---|
| RAD51C | CIViC #4762 | ||
| TP53 | LoF | ACC,ALL,AML,ANGS,ANSC,BCC,BL,BLADDER,BLCA,BRCA,CCRCC,CEAD,CESC,CHOL,CHRCC,CLLSLL,COAD,COADREAD,CSCC,DLBCLNOS,EGC,ES,ESCA,ESCC,GB,GBC,GBM,GIST,HCC,HGGNOS,HNSC,LGGNOS,LIPO,LMS,LNM,LUAD,LUSC,MBL,MEL,MLYM,MT,NBL,NETNOS,NHL,NPC,NSCLC,OS,OVT,PAAD,PANCREAS,PAST,PCM,PLMESO,PRAD,PRCC,PROSTATE,RCC,READ,SACA,SARCNOS,SCLC,SIC,SKCM,SKIN,SOFT_TISSUE,STAD,STOMACH,THYM,UCEC,UCS,UTUC,VULVA,WDTC,WT | CIViC #45 |
| RAD50 | Act | GBM | CIViC #8032 |
GenCC gene–disease validity (cohort genes)
the Disease column is the GenCC-asserted condition — a cohort gene’s strongest validity may be for a related predisposition syndrome.
| Gene | Classification | Inheritance | Disease | Records |
|---|---|---|---|---|
| RAD51C | Strong | Autosomal dominant | breast-ovarian cancer, familial, susceptibility to, 3 | 10 |
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|---|---|
| RAD51C | Orphanet:145 | Hereditary breast and/or ovarian cancer syndrome |
| RAD51C | Orphanet:84 | Fanconi anemia |
| TEX14 | Orphanet:399805 | Male infertility with azoospermia or oligozoospermia due to single gene mutation |
| TP53 | Orphanet:1333 | Familial pancreatic carcinoma |
| TP53 | Orphanet:145 | Hereditary breast and/or ovarian cancer syndrome |
| TP53 | Orphanet:1501 | Adrenocortical carcinoma |
| TP53 | Orphanet:210159 | Adult hepatocellular carcinoma |
| TP53 | Orphanet:251576 | Gliosarcoma |
| TP53 | Orphanet:251579 | Giant cell glioblastoma |
| TP53 | Orphanet:251899 | Choroid plexus carcinoma |
| TP53 | Orphanet:2807 | Papilloma of choroid plexus |
| TP53 | Orphanet:293199 | Pleomorphic rhabdomyosarcoma |
| TP53 | Orphanet:3318 | Essential thrombocythemia |
| TP53 | Orphanet:524 | Li-Fraumeni syndrome |
| TP53 | Orphanet:52688 | Myelodysplastic syndrome |
| TP53 | Orphanet:585909 | B-lymphoblastic leukemia/lymphoma with t(9;22)(q34.1;q11.2) |
| TP53 | Orphanet:667662 | Breast implant-associated anaplastic large cell lymphoma |
| TP53 | Orphanet:668 | Osteosarcoma |
| TP53 | Orphanet:67038 | B-cell chronic lymphocytic leukemia |
| TP53 | Orphanet:70573 | Small cell lung cancer |
| TP53 | Orphanet:96253 | Cushing disease |
| TP53 | Orphanet:99756 | Alveolar rhabdomyosarcoma |
| TP53 | Orphanet:99757 | Embryonal rhabdomyosarcoma |
| RAD50 | Orphanet:145 | Hereditary breast and/or ovarian cancer syndrome |
| RAD50 | Orphanet:240760 | Nijmegen breakage syndrome-like disorder |
Cohort genes → proteins
4 cohort genes, 4 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|---|
| multi_evidence | 4 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|---|---|---|---|---|
| RAD51C | HGNC:9820 | ENSG00000108384 | O43502 | DNA repair protein RAD51 homolog 3 | gencc,clinvar |
| TEX14 | HGNC:11737 | ENSG00000121101 | Q8IWB6 | Inactive serine/threonine-protein kinase TEX14 | clinvar |
| TP53 | HGNC:11998 | ENSG00000141510 | P04637 | Cellular tumor antigen p53 | clinvar |
| RAD50 | HGNC:9816 | ENSG00000113522 | Q92878 | DNA repair protein RAD50 | clinvar |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|---|---|
| RAD51C | DNA repair protein RAD51 homolog 3 | Essential for the homologous recombination (HR) pathway of DNA repair. |
| TEX14 | Inactive serine/threonine-protein kinase TEX14 | Required both for the formation of intercellular bridges during meiosis and for kinetochore-microtubule attachment during mitosis. |
| TP53 | Cellular tumor antigen p53 | Multifunctional transcription factor that induces cell cycle arrest, DNA repair or apoptosis upon binding to its target DNA sequence. |
| RAD50 | DNA repair protein RAD50 | Component of the MRN complex, which plays a central role in double-strand break (DSB) repair, DNA recombination, maintenance of telomere integrity and meiosis. |
Protein-family classification
Druggable: 1 · Difficult: 1 · Unknown: 2 · Druggable fraction: 0.25
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|---|---|---|
| Kinase | 1 | 6.9× | 0.410 |
| Transcription factor | 1 | 2.1× | 0.605 |
| Other/Unknown | 2 | 0.9× | 0.769 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|---|---|---|---|
| RAD51C | Other/Unknown | no | Rad51_C, DNA_recomb/repair_RecA-like, RecA_ATP-bd | |
| TEX14 | Kinase | yes | Prot_kinase_dom, Ser-Thr/Tyr_kinase_cat_dom, Ankyrin_rpt | |
| TP53 | Transcription factor | no | p53_tumour_suppressor, p53-like_TF_DNA-bd_sf, p53_tetrameristn | |
| RAD50 | Other/Unknown | no | Rad50_eukaryotes, Zn_hook_RAD50, P-loop_NTPase |
Expression context
Cohort genes with no expression data: 0.
4 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 0 |
| broad (>20) | 4 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|---|
| right testis | 2 |
| male germ line stem cell (sensu Vertebrata) in testis | 1 |
| primordial germ cell in gonad | 1 |
| left testis | 1 |
| testis | 1 |
| ganglionic eminence | 1 |
| tendon of biceps brachii | 1 |
| ventricular zone | 1 |
| calcaneal tendon | 1 |
| colonic epithelium | 1 |
| corpus callosum | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|---|---|---|---|
| RAD51C | 281 | ubiquitous | marker | primordial germ cell in gonad, right testis, male germ line stem cell (sensu Vertebrata) in testis |
| TEX14 | 162 | broad | marker | right testis, left testis, testis |
| TP53 | 223 | ubiquitous | marker | ventricular zone, ganglionic eminence, tendon of biceps brachii |
| RAD50 | 134 | ubiquitous | marker | corpus callosum, calcaneal tendon, colonic epithelium |
Protein interactions among cohort
Intra-cohort edges: 0.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|---|
| TP53 | 22,736 |
| RAD51C | 3,396 |
| RAD50 | 2,552 |
| TEX14 | 943 |
Structural data
PDB: 4 · AlphaFold-only: 0 · No structure: 0
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|---|---|
| TP53 | P04637 | 313 |
| RAD51C | O43502 | 17 |
| RAD50 | Q92878 | 6 |
| TEX14 | Q8IWB6 | 2 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 63. Enrichment computed across 4 evidence-associated genes (3 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 3 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| Impaired BRCA2 binding to PALB2 | 2 | 304.5× | 2e-04 | RAD51C, RAD50 |
| Defective homologous recombination repair (HRR) due to BRCA1 loss of function | 2 | 282.0× | 2e-04 | RAD51C, RAD50 |
| Defective HDR through Homologous Recombination Repair (HRR) due to PALB2 loss of BRCA1 binding function | 2 | 282.0× | 2e-04 | RAD51C, RAD50 |
| Defective HDR through Homologous Recombination Repair (HRR) due to PALB2 loss of BRCA2/RAD51/RAD51C binding function | 2 | 282.0× | 2e-04 | RAD51C, RAD50 |
| Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA) | 2 | 262.5× | 2e-04 | RAD51C, RAD50 |
| Homologous DNA Pairing and Strand Exchange | 2 | 253.8× | 2e-04 | RAD51C, RAD50 |
| Resolution of D-loop Structures through Holliday Junction Intermediates | 2 | 200.3× | 3e-04 | RAD51C, RAD50 |
| Presynaptic phase of homologous DNA pairing and strand exchange | 2 | 181.3× | 3e-04 | RAD51C, RAD50 |
| HDR through Homologous Recombination (HRR) | 2 | 126.9× | 6e-04 | RAD51C, RAD50 |
| DNA Damage/Telomere Stress Induced Senescence | 2 | 108.8× | 7e-04 | TP53, RAD50 |
| Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks | 2 | 97.6× | 8e-04 | TP53, RAD50 |
| Meiotic recombination | 2 | 86.5× | 9e-04 | RAD51C, RAD50 |
| G2/M DNA damage checkpoint | 2 | 80.1× | 1e-03 | TP53, RAD50 |
| Regulation of TP53 Activity through Phosphorylation | 2 | 78.5× | 1e-03 | TP53, RAD50 |
| Loss of function of TP53 in cancer due to loss of tetramerization ability | 1 | 3806.7× | 0.001 | TP53 |
| Regulation of TP53 Expression | 1 | 1903.3× | 0.002 | TP53 |
| Factors involved in megakaryocyte development and platelet production | 2 | 44.3× | 0.002 | RAD51C, TP53 |
| Transcriptional activation of cell cycle inhibitor p21 | 1 | 951.7× | 0.004 | TP53 |
| Activation of NOXA and translocation to mitochondria | 1 | 634.4× | 0.005 | TP53 |
| Sensing of DNA Double Strand Breaks | 1 | 634.4× | 0.005 | RAD50 |
| RUNX3 regulates CDKN1A transcription | 1 | 543.8× | 0.006 | TP53 |
| PI5P Regulates TP53 Acetylation | 1 | 423.0× | 0.007 | TP53 |
| Activation of PUMA and translocation to mitochondria | 1 | 380.7× | 0.007 | TP53 |
| TP53 Regulates Transcription of Caspase Activators and Caspases | 1 | 317.2× | 0.008 | TP53 |
| TP53 Regulates Transcription of Death Receptors and Ligands | 1 | 317.2× | 0.008 | TP53 |
| HDR through MMEJ (alt-NHEJ) | 1 | 292.8× | 0.008 | RAD50 |
| Urea cycle | 1 | 292.8× | 0.008 | TP53 |
| Regulation of TP53 Activity through Association with Co-factors | 1 | 271.9× | 0.008 | TP53 |
| TP53 regulates transcription of several additional cell death genes whose specific roles in p53-dependent apoptosis remain uncertain | 1 | 253.8× | 0.008 | TP53 |
| Stabilization of p53 | 1 | 253.8× | 0.008 | TP53 |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 4 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| telomere maintenance via recombination | 2 | 766.0× | 4e-04 | RAD51C, RAD50 |
| reciprocal meiotic recombination | 2 | 280.9× | 0.001 | RAD51C, RAD50 |
| DNA recombination | 2 | 168.5× | 0.003 | RAD51C, RAD50 |
| meiotic DNA recombinase assembly | 1 | 4213.0× | 0.003 | RAD51C |
| female meiosis sister chromatid cohesion | 1 | 4213.0× | 0.003 | RAD51C |
| intercellular bridge organization | 1 | 4213.0× | 0.003 | TEX14 |
| negative regulation of helicase activity | 1 | 4213.0× | 0.003 | TP53 |
| cellular response to actinomycin D | 1 | 4213.0× | 0.003 | TP53 |
| regulation of intrinsic apoptotic signaling pathway by p53 class mediator | 1 | 4213.0× | 0.003 | TP53 |
| negative regulation of G1 to G0 transition | 1 | 4213.0× | 0.003 | TP53 |
| double-strand break repair | 2 | 101.5× | 0.003 | TP53, RAD50 |
| double-strand break repair via homologous recombination | 2 | 78.0× | 0.003 | RAD51C, RAD50 |
| regulation of mitotic recombination | 1 | 2106.5× | 0.004 | RAD50 |
| positive regulation of mitochondrial membrane permeability | 1 | 2106.5× | 0.004 | TP53 |
| oligodendrocyte apoptotic process | 1 | 2106.5× | 0.004 | TP53 |
| negative regulation of glucose catabolic process to lactate via pyruvate | 1 | 2106.5× | 0.004 | TP53 |
| negative regulation of pentose-phosphate shunt | 1 | 2106.5× | 0.004 | TP53 |
| obsolete homolactic fermentation | 1 | 1404.3× | 0.005 | TP53 |
| signal transduction by p53 class mediator | 1 | 1404.3× | 0.005 | TP53 |
| negative regulation of miRNA processing | 1 | 1404.3× | 0.005 | TP53 |
| intrinsic apoptotic signaling pathway in response to hypoxia | 1 | 1404.3× | 0.005 | TP53 |
| regulation of fibroblast apoptotic process | 1 | 1404.3× | 0.005 | TP53 |
| T cell proliferation involved in immune response | 1 | 1053.2× | 0.005 | TP53 |
| telomeric 3’ overhang formation | 1 | 1053.2× | 0.005 | RAD50 |
| positive regulation of programmed necrotic cell death | 1 | 1053.2× | 0.005 | TP53 |
| oxidative stress-induced premature senescence | 1 | 1053.2× | 0.005 | TP53 |
| B cell lineage commitment | 1 | 842.6× | 0.005 | TP53 |
| T cell lineage commitment | 1 | 842.6× | 0.005 | TP53 |
| mRNA transcription | 1 | 842.6× | 0.005 | TP53 |
| positive regulation of RNA polymerase II transcription preinitiation complex assembly | 1 | 842.6× | 0.005 | TP53 |
Therapeutics
Drug target analysis
Approved (phase 4): 1 · Phase ≥3: 1 · Phased (≥1): 2 · Undrugged: 2
Druggability breadth: 2 of 4 evidence-associated genes (50%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Genes with an approved drug
The molecule shown is one approved compound that hits the gene — not necessarily a drug of choice or one indicated for this disease.
| Symbol | Example approved molecule |
|---|---|
| TP53 | NITROFURANTOIN |
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|---|---|
| TP53 | 196 | 4 |
| RAD50 | 1 | 2 |
| RAD51C | 0 | 0 |
| TEX14 | 0 | 0 |
Drugs targeting cohort genes (top 30)
| Molecule | Max phase | Targets in cohort |
|---|---|---|
| NITROFURANTOIN | 4 | TP53 |
| DIOSMIN | 4 | TP53 |
| VERTEPORFIN | 4 | TP53 |
| CANDESARTAN CILEXETIL | 4 | TP53 |
| DIENESTROL | 4 | TP53 |
| CLOTRIMAZOLE | 4 | TP53 |
| COLCHICINE | 4 | TP53 |
| NABUMETONE | 4 | TP53 |
| SALMETEROL XINAFOATE | 4 | TP53 |
| AMIODARONE HYDROCHLORIDE | 4 | TP53 |
| FURAZOLIDONE | 4 | TP53 |
| AMOXAPINE | 4 | TP53 |
| RALOXIFENE HYDROCHLORIDE | 4 | TP53 |
| NICARDIPINE HYDROCHLORIDE | 4 | TP53 |
| SULCONAZOLE NITRATE | 4 | TP53 |
| PYRITHIONE ZINC | 4 | TP53 |
| LACTIC ACID | 4 | TP53 |
| OXYMETHOLONE | 4 | TP53 |
| CHLOROXINE | 4 | TP53 |
| PROPIOLACTONE | 4 | TP53 |
| CLOMIPRAMINE HYDROCHLORIDE | 4 | TP53 |
| PHENYL AMINOSALICYLATE | 4 | TP53 |
| THIORIDAZINE HYDROCHLORIDE | 4 | TP53 |
| AMITRIPTYLINE HYDROCHLORIDE | 4 | TP53 |
| ETHOPROPAZINE HYDROCHLORIDE | 4 | TP53 |
| MECHLORETHAMINE HYDROCHLORIDE | 4 | TP53 |
| ECONAZOLE NITRATE | 4 | TP53 |
| TRIFLUPROMAZINE HYDROCHLORIDE | 4 | TP53 |
| PROCHLORPERAZINE EDISYLATE | 4 | TP53 |
| DEQUALINIUM CHLORIDE | 4 | TP53 |
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 0.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|---|---|
| TP53 | 869 | Binding:775, ADMET:83, Functional:10, Toxicity:1 |
| RAD50 | 7 | Binding:7 |
Cohort genes with high screening signal
≥100 ChEMBL assays — a studied-ness signal; see Therapeutics for approved-drug status.
| Symbol | ChEMBL assays |
|---|---|
| TP53 | 869 |
Pharmacogenomics
Cohort genes with a PharmGKB record: 4; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Drug repurposing candidates
30 approved/phased drugs hit cohort targets but don’t yet appear in disease-level clinical trials. Target-inhibition rationale is strongest for cancer driver genes; a bioactivity hit is a screening signal, not a treatment claim.
| Compound | Max phase | Cohort target (bioactivity) |
|---|---|---|
| NITROFURANTOIN | 4 | TP53 |
| DIOSMIN | 4 | TP53 |
| VERTEPORFIN | 4 | TP53 |
| CANDESARTAN CILEXETIL | 4 | TP53 |
| DIENESTROL | 4 | TP53 |
| CLOTRIMAZOLE | 4 | TP53 |
| COLCHICINE | 4 | TP53 |
| NABUMETONE | 4 | TP53 |
| SALMETEROL XINAFOATE | 4 | TP53 |
| AMIODARONE HYDROCHLORIDE | 4 | TP53 |
| FURAZOLIDONE | 4 | TP53 |
| AMOXAPINE | 4 | TP53 |
| RALOXIFENE HYDROCHLORIDE | 4 | TP53 |
| NICARDIPINE HYDROCHLORIDE | 4 | TP53 |
| SULCONAZOLE NITRATE | 4 | TP53 |
| PYRITHIONE ZINC | 4 | TP53 |
| LACTIC ACID | 4 | TP53 |
| OXYMETHOLONE | 4 | TP53 |
| CHLOROXINE | 4 | TP53 |
| PROPIOLACTONE | 4 | TP53 |
| CLOMIPRAMINE HYDROCHLORIDE | 4 | TP53 |
| PHENYL AMINOSALICYLATE | 4 | TP53 |
| THIORIDAZINE HYDROCHLORIDE | 4 | TP53 |
| AMITRIPTYLINE HYDROCHLORIDE | 4 | TP53 |
| ETHOPROPAZINE HYDROCHLORIDE | 4 | TP53 |
| MECHLORETHAMINE HYDROCHLORIDE | 4 | TP53 |
| ECONAZOLE NITRATE | 4 | TP53 |
| TRIFLUPROMAZINE HYDROCHLORIDE | 4 | TP53 |
| PROCHLORPERAZINE EDISYLATE | 4 | TP53 |
| DEQUALINIUM CHLORIDE | 4 | TP53 |
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|---|---|---|
| A | Approved (phase 4 drug) | 1 | TP53 |
| B | Phased (≥1) drug, not yet approved | 1 | RAD50 |
| C | Druggable family + PDB, no drug | 1 | TEX14 |
| D | Druggable family + AlphaFold only, no drug | 0 | |
| E | Difficult family or no structure, no drug | 1 | RAD51C |
Undrugged target profiles
2 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
| Symbol | ChEMBL assays | Drugged partners (top 3) |
|---|---|---|
| RAD51C | 0 | — |
| TEX14 | 0 | — |
Clinical trials & evidence
Clinical trials
Clinical trials: 0.