Charcot-Marie-Tooth disease type 1E
diseaseOn this page
Also known as Charcot Marie Tooth disease type 1ECharcot-Marie-Tooth disease and deafnessCharcot-Marie-Tooth disease, type 1ECharcot-Marie-Tooth disease-deafness syndromeCMT 1ECMT1E
Summary
Charcot-Marie-Tooth disease type 1E (MONDO:0007311) is a disease caused by PMP22 (GenCC Strong), with 6 cohort genes and 1 clinical trial.
At a glance
- Prevalence: Unknown (Worldwide) [Orphanet-validated]
- Causal gene: PMP22 (GenCC Strong)
- Cohort genes: 6
- ClinVar variants: 29
- Phenotypes (HPO): 40
- Clinical trials: 1
Clinical features
Signs & symptoms
Clinical features (HPO)
40 HPO clinical features (Orphanet curated; top 40 by frequency):
| HPO ID | Term | Frequency |
|---|---|---|
| HP:0000407 | Sensorineural hearing impairment | Very frequent (80-99%) |
| HP:0000762 | Decreased nerve conduction velocity | Very frequent (80-99%) |
| HP:0002936 | Distal sensory impairment | Very frequent (80-99%) |
| HP:0007108 | Demyelinating peripheral neuropathy | Very frequent (80-99%) |
| HP:0009053 | Distal lower limb muscle weakness | Very frequent (80-99%) |
| HP:0001288 | Gait disturbance | Very frequent (80-99%) |
| HP:0000615 | Abnormal pupil morphology | Frequent (30-79%) |
| HP:0001288 | Gait disturbance | Frequent (30-79%) |
| HP:0001761 | Pes cavus | Frequent (30-79%) |
| HP:0002166 | Impaired vibration sensation in the lower limbs | Frequent (30-79%) |
| HP:0002172 | Postural instability | Frequent (30-79%) |
| HP:0002522 | Areflexia of lower limbs | Frequent (30-79%) |
| HP:0002600 | Hyporeflexia of lower limbs | Frequent (30-79%) |
| HP:0008944 | Distal lower limb amyotrophy | Frequent (30-79%) |
| HP:0008962 | Calf muscle hypoplasia | Frequent (30-79%) |
| HP:0009027 | Foot dorsiflexor weakness | Frequent (30-79%) |
| HP:0009049 | Peroneal muscle atrophy | Frequent (30-79%) |
| HP:0009130 | Hand muscle atrophy | Frequent (30-79%) |
| HP:0010829 | Impaired temperature sensition | Frequent (30-79%) |
| HP:0010830 | Impaired tactile sensation | Frequent (30-79%) |
| HP:0010832 | Abnormality of pain sensation | Frequent (30-79%) |
| HP:0011727 | Peroneal muscle weakness | Frequent (30-79%) |
| HP:0012074 | Tonic pupil | Frequent (30-79%) |
| HP:0012391 | Hyporeflexia of upper limbs | Frequent (30-79%) |
| HP:0030211 | Slow pupillary light response | Frequent (30-79%) |
| HP:0030237 | Hand muscle weakness | Frequent (30-79%) |
| HP:0031006 | Acroparesthesia | Frequent (30-79%) |
| HP:0000360 | Tinnitus | Occasional (5-29%) |
| HP:0001171 | Split hand | Occasional (5-29%) |
| HP:0001263 | Global developmental delay | Occasional (5-29%) |
| HP:0001765 | Hammertoe | Occasional (5-29%) |
| HP:0002141 | Gait imbalance | Occasional (5-29%) |
| HP:0002540 | Inability to walk | Occasional (5-29%) |
| HP:0003376 | Steppage gait | Occasional (5-29%) |
| HP:0008110 | Equinovarus deformity | Occasional (5-29%) |
| HP:0008124 | Talipes calcaneovarus | Occasional (5-29%) |
| HP:0009473 | Joint contracture of the hand | Occasional (5-29%) |
| HP:0009916 | Anisocoria | Occasional (5-29%) |
| HP:0011476 | Profound sensorineural hearing impairment | Occasional (5-29%) |
| HP:0012735 | Cough | Occasional (5-29%) |
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | Charcot-Marie-Tooth disease type 1E |
| Mondo ID | MONDO:0007311 |
| MeSH | C537986 |
| OMIM | 118300 |
| Orphanet | 90658 |
| DOID | DOID:0110153 |
| ICD-11 | 1924906594 |
| UMLS | C3495591 |
| MedGen | 501212 |
| GARD | 0009190 |
| Is cancer (heuristic) | no |
Also known as: Charcot Marie Tooth disease type 1E · Charcot-Marie-Tooth disease and deafness · Charcot-Marie-Tooth disease, type 1E · Charcot-Marie-Tooth disease-deafness syndrome · CMT 1E · CMT1E
Data availability: 29 ClinVar variants · 4 GenCC gene-disease records.
Disease family
Classification path: disease › human disease › disease by body system or component › nervous system disorder › peripheral nervous system disorder › peripheral neuropathy › hereditary peripheral neuropathy › Charcot-Marie-Tooth disease › Charcot-Marie-Tooth disease type 1 › Charcot-Marie-Tooth disease type 1E
Related subtypes (5): Charcot-Marie-Tooth disease type 1B, Charcot-Marie-Tooth disease type 1A, Charcot-Marie-Tooth disease type 1C, Charcot-Marie-Tooth disease type 1D, Charcot-Marie-Tooth disease type 1F
Genetics & variants
GWAS landscape
No GWAS associations recorded — common-variant (GWAS) studies don’t cover this disease (typical for Mendelian / rare diseases). See the curated gene cohort and Mendelian overlap below.
Variant details and genetic-evidence tiers
ClinVar germline variants
29 retrieved; paginated sample, class counts are floors:
10 uncertain significance, 6 likely pathogenic, 5 pathogenic, 3 pathogenic/likely pathogenic, 3 conflicting classifications of pathogenicity, 2 benign/likely benign
| ClinVar | Variant (HGVS) | Gene | Classification | Review |
|---|---|---|---|---|
| 2580345 | GRCh37/hg19 17p12(chr17:14095256-15492591)x3 | CDRT15 | Pathogenic | criteria provided, single submitter |
| 3899836 | Single allele | HS3ST3B1 | Pathogenic | criteria provided, single submitter |
| 217238 | NM_000304.4(PMP22):c.434del (p.Leu145fs) | PMP22 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 30158 | NM_000304.4(PMP22):c.281del (p.Gly94fs) | PMP22 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 433198 | NM_000304.4(PMP22):c.449G>T (p.Gly150Val) | PMP22 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 568922 | NM_000304.4(PMP22):c.261_262del (p.Phe88fs) | PMP22 | Pathogenic | criteria provided, single submitter |
| 8436 | NM_000304.4(PMP22):c.199G>C (p.Ala67Pro) | PMP22 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 8444 | NM_000304.4(PMP22):c.469C>T (p.Arg157Trp) | PMP22 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 3776801 | NC_000017.11:g.14301519_15331585del | CDRT7 | Likely pathogenic | criteria provided, single submitter |
| 2584815 | NM_000304.4(PMP22):c.257_267del (p.Gln86fs) | PMP22 | Likely pathogenic | criteria provided, single submitter |
| 3776239 | NM_000304.4(PMP22):c.96_102dup (p.Ala35fs) | PMP22 | Likely pathogenic | criteria provided, single submitter |
| 3896952 | NM_000304.4(PMP22):c.201del (p.Thr68fs) | PMP22 | Likely pathogenic | criteria provided, single submitter |
| 637842 | NM_000304.4(PMP22):c.418T>A (p.Trp140Arg) | PMP22 | Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 8440 | NM_000304.4(PMP22):c.82T>C (p.Trp28Arg) | PMP22 | Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 431943 | NM_000304.4(PMP22):c.233T>C (p.Leu78Pro) | PMP22 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 8431 | NM_000304.4(PMP22):c.353C>T (p.Thr118Met) | PMP22 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 8441 | NM_000304.4(PMP22):c.344_355del (p.Ala115_Thr118del) | PMP22 | Conflicting classifications of pathogenicity | no assertion criteria provided |
| 3896951 | NM_002677.5(PMP2):c.354T>C (p.Cys118=) | PMP2 | Uncertain significance | criteria provided, single submitter |
| 188195 | NM_000304.4(PMP22):c.185T>G (p.Leu62Arg) | PMP22 | Uncertain significance | criteria provided, multiple submitters, no conflicts |
| 208243 | NM_000304.4(PMP22):c.117G>C (p.Trp39Cys) | PMP22 | Uncertain significance | no assertion criteria provided |
| 462781 | NM_000304.4(PMP22):c.478G>A (p.Glu160Lys) | PMP22 | Uncertain significance | criteria provided, multiple submitters, no conflicts |
| 4795129 | NM_000304.4(PMP22):c.83G>C (p.Trp28Ser) | PMP22 | Uncertain significance | criteria provided, single submitter |
| 531692 | NM_000304.4(PMP22):c.255C>G (p.Cys85Trp) | PMP22 | Uncertain significance | criteria provided, multiple submitters, no conflicts |
| 586345 | NM_000304.4(PMP22):c.362A>G (p.His121Arg) | PMP22 | Uncertain significance | criteria provided, single submitter |
| 637422 | NM_000304.4(PMP22):c.-134G>A | PMP22 | Uncertain significance | criteria provided, single submitter |
| 872649 | NM_000304.4(PMP22):c.260T>C (p.Leu87Pro) | PMP22 | Uncertain significance | criteria provided, multiple submitters, no conflicts |
| 1346244 | NM_182961.4(SYNE1):c.13825C>A (p.Leu4609Ile) | SYNE1 | Uncertain significance | criteria provided, multiple submitters, no conflicts |
| 321862 | NM_000304.4(PMP22):c.79-6C>T | PMP22 | Benign/Likely benign | criteria provided, multiple submitters, no conflicts |
| 378379 | NM_000304.4(PMP22):c.396C>T (p.Tyr132=) | PMP22 | Benign/Likely benign | criteria provided, multiple submitters, no conflicts |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 21 · Orphanet: 10 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
GenCC gene–disease validity (cohort genes)
the Disease column is the GenCC-asserted condition — a cohort gene’s strongest validity may be for a related predisposition syndrome.
| Gene | Classification | Inheritance | Disease | Records |
|---|---|---|---|---|
| PMP22 | Definitive | Autosomal dominant | Charcot-Marie-Tooth disease type 1A | 21 |
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|---|---|
| PMP22 | Orphanet:101081 | Charcot-Marie-Tooth disease type 1A |
| PMP22 | Orphanet:3115 | Roussy-Lévy syndrome |
| PMP22 | Orphanet:640 | Hereditary neuropathy with liability to pressure palsies |
| PMP22 | Orphanet:64748 | Dejerine-Sottas syndrome |
| PMP22 | Orphanet:90658 | Charcot-Marie-Tooth disease type 1E |
| PMP22 | Orphanet:98916 | Acute inflammatory demyelinating polyradiculoneuropathy |
| SYNE1 | Orphanet:319332 | Autosomal recessive myogenic arthrogryposis multiplex congenita |
| SYNE1 | Orphanet:88644 | Autosomal recessive ataxia, Beauce type |
| SYNE1 | Orphanet:98853 | Autosomal dominant Emery-Dreifuss muscular dystrophy |
| PMP2 | Orphanet:476394 | PMP2-related Charcot-Marie-Tooth disease type 1 |
Cohort genes → proteins
6 cohort genes, 5 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|---|
| multi_evidence | 6 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|---|---|---|---|---|
| PMP22 | HGNC:9118 | ENSG00000109099 | Q01453 | Peripheral myelin protein 22 | gencc,clinvar |
| CDRT7 | HGNC:14386 | ENSG00000259944 | CMT1A duplicated region transcript 7 | clinvar | |
| CDRT15 | HGNC:14395 | ENSG00000223510 | Q96T59 | CMT1A duplicated region transcript 15 protein | clinvar |
| SYNE1 | HGNC:17089 | ENSG00000131018 | Q8NF91 | Nesprin-1 | clinvar |
| HS3ST3B1 | HGNC:5198 | ENSG00000125430 | Q9Y662 | Heparan sulfate glucosamine 3-O-sulfotransferase 3B1 | clinvar |
| PMP2 | HGNC:9117 | ENSG00000147588 | P02689 | Myelin P2 protein | clinvar |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|---|---|
| PMP22 | Peripheral myelin protein 22 | Might be involved in growth regulation, and in myelinization in the peripheral nervous system. |
| SYNE1 | Nesprin-1 | Multi-isomeric modular protein which forms a linking network between organelles and the actin cytoskeleton to maintain the subcellular spatial organization. |
| HS3ST3B1 | Heparan sulfate glucosamine 3-O-sulfotransferase 3B1 | Sulfotransferase that utilizes 3’-phospho-5’-adenylyl sulfate (PAPS) to catalyze the transfer of a sulfo group to an N-unsubstituted glucosamine linked to a 2-O-sulfo iduronic acid unit on heparan sulfate. |
| PMP2 | Myelin P2 protein | May play a role in lipid transport protein in Schwann cells. |
Protein-family classification
Druggable: 1 · Difficult: 0 · Unknown: 5 · Druggable fraction: 0.17
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|---|---|---|
| Other/Unknown | 5 | 1.5× | 0.348 |
| Enzyme (other) | 1 | 2.0× | 0.407 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|---|---|---|---|
| PMP22 | Other/Unknown | no | PMP22, PMP22/EMP/MP20/Claudin, PMP22_EMP_MP20 | |
| CDRT7 | Other/Unknown | no | ||
| CDRT15 | Other/Unknown | no | ||
| SYNE1 | Other/Unknown | no | Actinin_actin-bd_CS, CH_dom, Spectrin_repeat | |
| HS3ST3B1 | Enzyme (other) | yes | 2.8.2.30 | Sulfotransferase_dom, P-loop_NTPase, NST/OST |
| PMP2 | Other/Unknown | no | Fatty_acid-bd, Lipocln_cytosolic_FA-bd_dom, Calycin |
Expression context
Cohort genes with no expression data: 0.
4 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 1 |
| broad (>20) | 5 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|---|
| olfactory bulb | 2 |
| trigeminal ganglion | 2 |
| male germ line stem cell (sensu Vertebrata) in testis | 2 |
| dorsal root ganglion | 1 |
| Brodmann (1909) area 9 | 1 |
| liver | 1 |
| left testis | 1 |
| right testis | 1 |
| calcaneal tendon | 1 |
| cerebellar hemisphere | 1 |
| right hemisphere of cerebellum | 1 |
| epithelium of nasopharynx | 1 |
| parotid gland | 1 |
| tibia | 1 |
| superior vestibular nucleus | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|---|---|---|---|
| PMP22 | 294 | ubiquitous | marker | olfactory bulb, trigeminal ganglion, dorsal root ganglion |
| CDRT7 | 16 | yes | male germ line stem cell (sensu Vertebrata) in testis, Brodmann (1909) area 9, liver | |
| CDRT15 | 127 | yes | right testis, male germ line stem cell (sensu Vertebrata) in testis, left testis | |
| SYNE1 | 275 | ubiquitous | marker | cerebellar hemisphere, right hemisphere of cerebellum, calcaneal tendon |
| HS3ST3B1 | 206 | ubiquitous | marker | tibia, parotid gland, epithelium of nasopharynx |
| PMP2 | 209 | tissue_specific | marker | olfactory bulb, superior vestibular nucleus, trigeminal ganglion |
Protein interactions among cohort
Intra-cohort edges: 1.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|---|
| SYNE1 | 2,886 |
| PMP2 | 1,374 |
| PMP22 | 647 |
| HS3ST3B1 | 459 |
| CDRT15 | 137 |
| CDRT7 | 0 |
Intra-cohort edges
| A | B | Sources |
|---|---|---|
| CDRT15 | HS3ST3B1 | string_interaction |
Structural data
PDB: 2 · AlphaFold-only: 3 · No structure: 1
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|---|---|
| PMP2 | P02689 | 30 |
| SYNE1 | Q8NF91 | 3 |
AlphaFold-only cohort genes (top 30 by pLDDT)
| Symbol | UniProt | pLDDT |
|---|---|---|
| PMP22 | Q01453 | 89.87 |
| HS3ST3B1 | Q9Y662 | 83.45 |
| CDRT15 | Q96T59 | 52.21 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 6. Enrichment computed across 6 evidence-associated genes (3 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 3 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| EGR2 and SOX10-mediated initiation of Schwann cell myelination | 1 | 122.8× | 0.021 | PMP22 |
| HS-GAG biosynthesis | 1 | 115.3× | 0.021 | HS3ST3B1 |
| Meiosis | 1 | 95.2× | 0.021 | SYNE1 |
| Reproduction | 1 | 63.4× | 0.024 | SYNE1 |
| Meiotic synapsis | 1 | 47.0× | 0.025 | SYNE1 |
| Cell Cycle | 1 | 12.0× | 0.081 | SYNE1 |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 4 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| nuclear matrix anchoring at nuclear membrane | 1 | 1404.3× | 0.013 | SYNE1 |
| myelin assembly | 1 | 468.1× | 0.014 | PMP22 |
| bleb assembly | 1 | 383.0× | 0.014 | PMP22 |
| glycosaminoglycan biosynthetic process | 1 | 210.7× | 0.014 | HS3ST3B1 |
| muscle cell differentiation | 1 | 210.7× | 0.014 | SYNE1 |
| fatty acid transport | 1 | 156.0× | 0.014 | PMP2 |
| peripheral nervous system development | 1 | 145.3× | 0.014 | PMP22 |
| nucleus organization | 1 | 140.4× | 0.014 | SYNE1 |
| heparan sulfate proteoglycan biosynthetic process | 1 | 140.4× | 0.014 | HS3ST3B1 |
| membrane organization | 1 | 127.7× | 0.014 | PMP2 |
| branching involved in ureteric bud morphogenesis | 1 | 91.6× | 0.018 | HS3ST3B1 |
| negative regulation of neuron projection development | 1 | 59.3× | 0.025 | PMP22 |
| Golgi organization | 1 | 33.4× | 0.041 | SYNE1 |
| chemical synaptic transmission | 1 | 19.3× | 0.065 | PMP22 |
| negative regulation of cell population proliferation | 1 | 10.5× | 0.110 | PMP22 |
| spermatogenesis | 1 | 8.8× | 0.123 | SYNE1 |
| cell differentiation | 1 | 7.3× | 0.132 | PMP22 |
| apoptotic process | 1 | 7.2× | 0.132 | PMP22 |
Therapeutics
Drug target analysis
Approved (phase 4): 1 · Phase ≥3: 1 · Phased (≥1): 1 · Undrugged: 5
Druggability breadth: 2 of 6 evidence-associated genes (33%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Genes with an approved drug
The molecule shown is one approved compound that hits the gene — not necessarily a drug of choice or one indicated for this disease.
| Symbol | Example approved molecule |
|---|---|
| PMP22 | PROGESTERONE |
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|---|---|
| PMP22 | 213 | 4 |
| CDRT7 | 0 | 0 |
| CDRT15 | 0 | 0 |
| SYNE1 | 0 | 0 |
| HS3ST3B1 | 0 | 0 |
| PMP2 | 0 | 0 |
Drugs targeting cohort genes (top 30)
| Molecule | Max phase | Targets in cohort |
|---|---|---|
| PROGESTERONE | 4 | PMP22 |
| CLOTRIMAZOLE | 4 | PMP22 |
| OXAPROZIN | 4 | PMP22 |
| SALMETEROL XINAFOATE | 4 | PMP22 |
| AMIODARONE HYDROCHLORIDE | 4 | PMP22 |
| TRIHEXYPHENIDYL HYDROCHLORIDE | 4 | PMP22 |
| AMOXAPINE | 4 | PMP22 |
| RALOXIFENE HYDROCHLORIDE | 4 | PMP22 |
| IDARUBICIN | 4 | PMP22 |
| OXYBUTYNIN CHLORIDE | 4 | PMP22 |
| PINACIDIL ANHYDROUS | 4 | PMP22 |
| NICARDIPINE HYDROCHLORIDE | 4 | PMP22 |
| PILOCARPINE HYDROCHLORIDE | 4 | PMP22 |
| PROTRIPTYLINE HYDROCHLORIDE | 4 | PMP22 |
| BENZTROPINE MESYLATE | 4 | PMP22 |
| BUSPIRONE HYDROCHLORIDE | 4 | PMP22 |
| DOBUTAMINE HYDROCHLORIDE | 4 | PMP22 |
| PROMAZINE HYDROCHLORIDE | 4 | PMP22 |
| DICYCLOMINE HYDROCHLORIDE | 4 | PMP22 |
| GUANFACINE HYDROCHLORIDE | 4 | PMP22 |
| HYDROCORTISONE SODIUM SUCCINATE | 4 | PMP22 |
| BROMOCRIPTINE MESYLATE | 4 | PMP22 |
| DIHYDROERGOTAMINE MESYLATE | 4 | PMP22 |
| DOXAZOSIN MESYLATE | 4 | PMP22 |
| CYCLOBENZAPRINE HYDROCHLORIDE | 4 | PMP22 |
| DEXBROMPHENIRAMINE MALEATE | 4 | PMP22 |
| CLOMIPRAMINE HYDROCHLORIDE | 4 | PMP22 |
| CHLORMEZANONE | 4 | PMP22 |
| PROMETHAZINE HYDROCHLORIDE | 4 | PMP22 |
| CITALOPRAM HYDROBROMIDE | 4 | PMP22 |
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 1.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|---|---|
| PMP22 | 1 | Functional:1 |
| PMP2 | 1 | Binding:1 |
Cohort enzymes (BRENDA EC)
| Symbol | EC numbers | Names |
|---|---|---|
| HS3ST3B1 | 2.8.2.30 | [heparan sulfate]-glucosamine 3-sulfotransferase 3 |
Pharmacogenomics
Cohort genes with a PharmGKB record: 6; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Chemical tractability of cohort targets
30 approved/phased compounds have measured bioactivity against a cohort gene (and aren’t yet in disease-level trials). This is a research / tractability signal, NOT a therapeutic recommendation — a bioactivity row often reflects off-target or screening binding (e.g. promiscuous kinase inhibitors against a cohort kinase), implying no disease mechanism.
| Compound | Max phase | Cohort target (bioactivity) |
|---|---|---|
| PROGESTERONE | 4 | PMP22 |
| CLOTRIMAZOLE | 4 | PMP22 |
| OXAPROZIN | 4 | PMP22 |
| SALMETEROL XINAFOATE | 4 | PMP22 |
| AMIODARONE HYDROCHLORIDE | 4 | PMP22 |
| TRIHEXYPHENIDYL HYDROCHLORIDE | 4 | PMP22 |
| AMOXAPINE | 4 | PMP22 |
| RALOXIFENE HYDROCHLORIDE | 4 | PMP22 |
| IDARUBICIN | 4 | PMP22 |
| OXYBUTYNIN CHLORIDE | 4 | PMP22 |
| PINACIDIL ANHYDROUS | 4 | PMP22 |
| NICARDIPINE HYDROCHLORIDE | 4 | PMP22 |
| PILOCARPINE HYDROCHLORIDE | 4 | PMP22 |
| PROTRIPTYLINE HYDROCHLORIDE | 4 | PMP22 |
| BENZTROPINE MESYLATE | 4 | PMP22 |
| BUSPIRONE HYDROCHLORIDE | 4 | PMP22 |
| DOBUTAMINE HYDROCHLORIDE | 4 | PMP22 |
| PROMAZINE HYDROCHLORIDE | 4 | PMP22 |
| DICYCLOMINE HYDROCHLORIDE | 4 | PMP22 |
| GUANFACINE HYDROCHLORIDE | 4 | PMP22 |
| HYDROCORTISONE SODIUM SUCCINATE | 4 | PMP22 |
| BROMOCRIPTINE MESYLATE | 4 | PMP22 |
| DIHYDROERGOTAMINE MESYLATE | 4 | PMP22 |
| DOXAZOSIN MESYLATE | 4 | PMP22 |
| CYCLOBENZAPRINE HYDROCHLORIDE | 4 | PMP22 |
| DEXBROMPHENIRAMINE MALEATE | 4 | PMP22 |
| CLOMIPRAMINE HYDROCHLORIDE | 4 | PMP22 |
| CHLORMEZANONE | 4 | PMP22 |
| PROMETHAZINE HYDROCHLORIDE | 4 | PMP22 |
| CITALOPRAM HYDROBROMIDE | 4 | PMP22 |
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|---|---|---|
| A | Approved (phase 4 drug) | 1 | PMP22 |
| B | Phased (≥1) drug, not yet approved | 0 | |
| C | Druggable family + PDB, no drug | 0 | |
| D | Druggable family + AlphaFold only, no drug | 1 | HS3ST3B1 |
| E | Difficult family or no structure, no drug | 4 | CDRT7, CDRT15, SYNE1, PMP2 |
Undrugged target profiles
5 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
| Symbol | ChEMBL assays | Drugged partners (top 3) |
|---|---|---|
| CDRT7 | 0 | — |
| CDRT15 | 0 | — |
| SYNE1 | 0 | — |
| HS3ST3B1 | 0 | — |
| PMP2 | 1 | — |
Clinical trials & evidence
Clinical trials
Clinical trials: 1.
Phase distribution (across all retrieved trials)
| Phase | Trials |
|---|---|
| Not specified | 1 |
Top trials by phase / activity
| NCT | Phase | Status | Title |
|---|---|---|---|
| NCT05902351 | Not specified | RECRUITING | Natural History Study for Charcot Marie Tooth Disease |