Classic familial adenomatous polyposis
disease diseaseOn this page
Also known as adenomatous polyposis coliclassic FAPcolorectal adenomatous polyposisFamilial Adenomatous Polyposisfamilial adenomatous polyposis colifamilial adenomatous polyposis of the colonfamilial adenomatous polyposis syndromefamilial multiple polyposisfamilial polyposisfamilial polyposis coliFAPFPChereditary adenomatous polyposis colihereditary polyposis colipolyposis coli
Summary
Classic familial adenomatous polyposis (MONDO:0021055) is a disease with 2 cohort genes and 89 clinical trials. Top therapeutic interventions include sulindac, eflornithine, and guselkumab.
At a glance
- Prevalence: 1-9 / 100 000 (Europe) [Orphanet-validated]
- Cohort genes: 2
- ClinVar variants: 213
- Phenotypes (HPO): 45
- Clinical trials: 89
Clinical features
Epidemiology
Prevalence records
12 prevalence record(s), Orphanet:
| Type | Class | Value | Geography | Validation |
|---|---|---|---|---|
| Point prevalence | 1-9 / 100 000 | 6 | Europe | Validated |
| Annual incidence | 1-5 / 10 000 | 19 | Denmark | Validated |
| Annual incidence | 1-9 / 100 000 | 8.6 | Sweden | Validated |
| Annual incidence | 1-5 / 10 000 | 15.8 | Finland | Validated |
| Annual incidence | 1-9 / 1 000 000 | 0.24 | Australia | Validated |
| Point prevalence | 1-9 / 100 000 | 4.65 | Denmark | Validated |
| Point prevalence | 1-9 / 100 000 | 3.2 | Sweden | Validated |
| Point prevalence | 1-9 / 100 000 | 2.63 | Finland | Validated |
| Point prevalence | 1-9 / 100 000 | 5.3 | United Kingdom | Validated |
| Point prevalence | 1-9 / 100 000 | 2.8 | Australia | Validated |
| Prevalence at birth | 1-5 / 10 000 | 11.6 | United Kingdom | Validated |
| Point prevalence | 1-9 / 100 000 | Worldwide | Not yet validated |
Signs & symptoms
Clinical features (HPO)
45 HPO clinical features (Orphanet curated; top 45 by frequency):
| HPO ID | Term | Frequency |
|---|---|---|
| HP:0003003 | Colon cancer | Very frequent (80-99%) |
| HP:0005227 | Adenomatous colonic polyposis | Very frequent (80-99%) |
| HP:0007378 | Neoplasm of the gastrointestinal tract | Very frequent (80-99%) |
| HP:0007649 | Congenital hypertrophy of retinal pigment epithelium | Very frequent (80-99%) |
| HP:0100245 | Desmoid tumors | Very frequent (80-99%) |
| HP:0200063 | Colorectal polyposis | Very frequent (80-99%) |
| HP:0000164 | Abnormality of the dentition | Frequent (30-79%) |
| HP:0002014 | Diarrhea | Frequent (30-79%) |
| HP:0002019 | Constipation | Frequent (30-79%) |
| HP:0004394 | Multiple gastric polyps | Frequent (30-79%) |
| HP:0004783 | Duodenal polyposis | Frequent (30-79%) |
| HP:0025388 | Thyroid nodule | Frequent (30-79%) |
| HP:0100246 | Osteoma | Frequent (30-79%) |
| HP:0000706 | Unerupted tooth | Occasional (5-29%) |
| HP:0000820 | Abnormality of the thyroid gland | Occasional (5-29%) |
| HP:0002895 | Papillary thyroid carcinoma | Occasional (5-29%) |
| HP:0006771 | Duodenal adenocarcinoma | Occasional (5-29%) |
| HP:0008256 | Adrenocortical adenoma | Occasional (5-29%) |
| HP:0010615 | Angiofibromas | Occasional (5-29%) |
| HP:0011068 | Odontoma | Occasional (5-29%) |
| HP:0011069 | Supernumerary tooth | Occasional (5-29%) |
| HP:0100631 | Neoplasm of the adrenal gland | Occasional (5-29%) |
| HP:0100717 | Abnormality of the cementum | Occasional (5-29%) |
| HP:0030434 | Pilomatrixoma | Very rare (<1-4%) |
| HP:0030692 | Brain neoplasm | Very rare (<1-4%) |
| HP:0031459 | Soft tissue neoplasm | Very rare (<1-4%) |
| HP:0040274 | Adenocarcinoma of the small intestine | Very rare (<1-4%) |
| HP:0100575 | Neoplasm of the gallbladder | Very rare (<1-4%) |
| HP:0100646 | Thyroiditis | Very rare (<1-4%) |
| HP:0200040 | Epidermoid cyst | Very rare (<1-4%) |
| HP:0000821 | Hypothyroidism | Very rare (<1-4%) |
| HP:0000853 | Goiter | Very rare (<1-4%) |
| HP:0001733 | Pancreatitis | Very rare (<1-4%) |
| HP:0002884 | Hepatoblastoma | Very rare (<1-4%) |
| HP:0002885 | Medulloblastoma | Very rare (<1-4%) |
| HP:0002888 | Ependymoma | Very rare (<1-4%) |
| HP:0002893 | Pituitary adenoma | Very rare (<1-4%) |
| HP:0005230 | Biliary tract obstruction | Very rare (<1-4%) |
| HP:0006725 | Pancreatic adenocarcinoma | Very rare (<1-4%) |
| HP:0009592 | Astrocytoma | Very rare (<1-4%) |
| HP:0010614 | Fibroma | Very rare (<1-4%) |
| HP:0011355 | Localized skin lesion | Very rare (<1-4%) |
| HP:0012032 | Lipoma | Very rare (<1-4%) |
| HP:0012126 | Stomach cancer | Very rare (<1-4%) |
| HP:0030153 | Cholangiocarcinoma | Very rare (<1-4%) |
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | classic familial adenomatous polyposis |
| Mondo ID | MONDO:0021055 |
| OMIM | 175100 |
| Orphanet | 733 |
| DOID | DOID:0050424 |
| NCIT | C3339 |
| SNOMED CT | 72900001 |
| UMLS | C0032580 |
| MedGen | 46010 |
| GARD | 0006408 |
| MedDRA | 10056981 |
| NORD | 1121 |
| Is cancer (heuristic) | no |
Also known as: adenomatous polyposis coli · classic familial adenomatous polyposis · classic FAP · colorectal adenomatous polyposis · Familial Adenomatous Polyposis · familial adenomatous polyposis · familial adenomatous polyposis coli · familial adenomatous polyposis of the colon · familial adenomatous polyposis syndrome · familial multiple polyposis · familial polyposis · familial polyposis coli · FAP · FPC · hereditary adenomatous polyposis coli · hereditary polyposis coli · polyposis coli
Data availability: 213 ClinVar variants · 1 ClinGen variant curation · 95 cell lines.
Disease family
An umbrella term covering 3 Mondo subtypes.
Classification path: disease › human disease › disease by etiologic mechanism › disease of genetic or genomic mechanism › hereditary disease › hereditary neoplastic syndrome › intestinal polyposis syndrome › classic or attenuated familial adenomatous polyposis › classic familial adenomatous polyposis
Related subtypes (7): familial adenomatous polyposis 2, familial adenomatous polyposis 3, attenuated familial adenomatous polyposis, AXIN2-related attenuated familial adenomatous polyposis, Polymerase proofreading-related adenomatous polyposis, familial adenomatous polyposis 1, familial adenomatous polyposis 4
Subtypes (3): familial adenomatous polyposis due to 5q22.2 microdeletion, Gardner syndrome, Turcot syndrome with polyposis
Genetics & variants
GWAS landscape
No GWAS associations recorded — common-variant (GWAS) studies don’t cover this disease (typical for Mendelian / rare diseases). See the curated gene cohort and Mendelian overlap below.
Variant details and genetic-evidence tiers
ClinVar germline variants
213 retrieved; paginated sample, class counts are floors:
122 pathogenic, 35 pathogenic/likely pathogenic, 20 likely pathogenic, 16 conflicting classifications of pathogenicity, 10 benign/likely benign, 5 uncertain significance, 4 benign, 1 conflicting classifications of pathogenicity; association; risk factor
| ClinVar | Variant (HGVS) | Gene | Classification | Review |
|---|---|---|---|---|
| 1070046 | NM_000038.6(APC):c.1958+2T>G | APC | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 1073668 | NM_000038.6(APC):c.1500del (p.Arg499_Tyr500insTer) | APC | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 1192196 | NM_000038.6(APC):c.3581C>A (p.Ser1194Ter) | APC | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 127275 | NM_000038.6(APC):c.1213C>T (p.Arg405Ter) | APC | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 127281 | NM_000038.6(APC):c.2413C>T (p.Arg805Ter) | APC | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 127299 | NM_000038.6(APC):c.4875del (p.Gln1625fs) | APC | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 127312 | NM_000038.6(APC):c.646C>T (p.Arg216Ter) | APC | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 1330021 | NM_000038.6(APC):c.1775T>G (p.Leu592Ter) | APC | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 1371144 | NM_000038.6(APC):c.5214_5215del (p.His1738fs) | APC | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 140863 | NM_000038.6(APC):c.5936_5939del (p.Asn1979fs) | APC | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 140952 | NM_000038.6(APC):c.637C>T (p.Arg213Ter) | APC | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 141368 | NM_000038.6(APC):c.147_150del (p.Lys49fs) | APC | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 141515 | NM_000038.6(APC):c.220+2T>A | APC | Pathogenic | reviewed by expert panel |
| 142199 | NM_000038.6(APC):c.2004del (p.His668_Leu669insTer) | APC | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 142574 | NM_000038.6(APC):c.426_427del (p.Leu143fs) | APC | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 1451499 | NM_000038.6(APC):c.2377C>T (p.Gln793Ter) | APC | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 1457212 | NM_000038.6(APC):c.2053_2054del (p.Trp685fs) | APC | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 156482 | NM_000038.6(APC):c.1744-2A>G | APC | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 1697514 | NM_000038.6(APC):c.289G>A (p.Gly97Arg) | APC | Pathogenic | criteria provided, single submitter |
| 1704635 | NC_000005.9:g.(112103088_112111325)_(112111435_112116486)del | APC | Pathogenic | criteria provided, single submitter |
| 1723265 | NM_000038.6(APC):c.3258_3259del (p.Leu1087fs) | APC | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 1730011 | NM_000038.6(APC):c.3304del (p.Tyr1102fs) | APC | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 1735824 | NM_000038.6(APC):c.3883_3886del (p.Glu1295fs) | APC | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 1736223 | NM_000038.6(APC):c.3925_3926del (p.Glu1309fs) | APC | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 177906 | NM_000038.4(APC):c.(?1)(8477_?)del | APC | Pathogenic | criteria provided, single submitter |
| 1779228 | NM_000038.6(APC):c.1743+1G>C | APC | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 1804741 | NM_000038.6(APC):c.778C>T (p.Gln260Ter) | APC | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 181831 | NM_000038.6(APC):c.288T>A (p.Tyr96Ter) | APC | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 181835 | NM_000038.6(APC):c.5490_5493del (p.Asn1830fs) | APC | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 183078 | NM_000038.6(APC):c.3149del (p.Ala1050fs) | APC | Pathogenic | criteria provided, multiple submitters, no conflicts |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 0 · Orphanet: 7 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|---|---|
| APC | Orphanet:220460 | Attenuated familial adenomatous polyposis |
| APC | Orphanet:261584 | 5q22 microdeletion syndrome |
| APC | Orphanet:314022 | Gastric adenocarcinoma and proximal polyposis of the stomach |
| APC | Orphanet:3258 | Cenani-Lenz syndrome |
| APC | Orphanet:873 | Desmoid tumor |
| MUTYH | Orphanet:247798 | MUTYH-related polyposis |
| MUTYH | Orphanet:440437 | Familial colorectal cancer Type X |
Cohort genes → proteins
2 cohort genes, 2 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|---|
| multi_evidence | 2 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|---|---|---|---|---|
| APC | HGNC:583 | ENSG00000134982 | P25054 | Adenomatous polyposis coli protein | clinvar |
| MUTYH | HGNC:7527 | ENSG00000132781 | Q9UIF7 | Adenine DNA glycosylase | clinvar |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|---|---|
| APC | Adenomatous polyposis coli protein | Tumor suppressor. |
| MUTYH | Adenine DNA glycosylase | Involved in oxidative DNA damage repair. |
Protein-family classification
Druggable: 0 · Difficult: 0 · Unknown: 2 · Druggable fraction: 0.0
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|---|---|---|
| Other/Unknown | 2 | 1.8× | 0.312 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|---|---|---|---|
| APC | Other/Unknown | no | Armadillo, APC_rpt, SAMP | |
| MUTYH | Other/Unknown | no | NUDIX_hydrolase_dom, HhH_motif, HhH-GPD_domain |
Expression context
Cohort genes with no expression data: 0.
2 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 0 |
| broad (>20) | 2 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|---|
| medial globus pallidus | 1 |
| substantia nigra pars compacta | 1 |
| substantia nigra pars reticulata | 1 |
| cerebellar cortex | 1 |
| cerebellar hemisphere | 1 |
| right hemisphere of cerebellum | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|---|---|---|---|
| APC | 297 | ubiquitous | marker | substantia nigra pars compacta, substantia nigra pars reticulata, medial globus pallidus |
| MUTYH | 134 | ubiquitous | marker | cerebellar hemisphere, cerebellar cortex, right hemisphere of cerebellum |
Protein interactions among cohort
Intra-cohort edges: 0.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|---|
| APC | 2,903 |
| MUTYH | 1,815 |
Structural data
PDB: 2 · AlphaFold-only: 0 · No structure: 0
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|---|---|
| APC | P25054 | 31 |
| MUTYH | Q9UIF7 | 3 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 36. Enrichment computed across 2 evidence-associated genes (2 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 2 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| APC truncation mutants are not K63 polyubiquitinated | 1 | 5710.0× | 0.002 | APC |
| Defective MUTYH substrate binding | 1 | 5710.0× | 0.002 | MUTYH |
| Defective MUTYH substrate processing | 1 | 5710.0× | 0.002 | MUTYH |
| Displacement of DNA glycosylase by APEX1 | 1 | 519.1× | 0.006 | MUTYH |
| Signaling by AXIN mutants | 1 | 519.1× | 0.006 | APC |
| Signaling by CTNNB1 phospho-site mutants | 1 | 519.1× | 0.006 | APC |
| Signaling by APC mutants | 1 | 519.1× | 0.006 | APC |
| Signaling by AMER1 mutants | 1 | 519.1× | 0.006 | APC |
| APC truncation mutants have impaired AXIN binding | 1 | 407.9× | 0.006 | APC |
| AXIN missense mutants destabilize the destruction complex | 1 | 407.9× | 0.006 | APC |
| Truncations of AMER1 destabilize the destruction complex | 1 | 407.9× | 0.006 | APC |
| Signaling by GSK3beta mutants | 1 | 380.7× | 0.006 | APC |
| CTNNB1 S33 mutants aren’t phosphorylated | 1 | 380.7× | 0.006 | APC |
| CTNNB1 S37 mutants aren’t phosphorylated | 1 | 380.7× | 0.006 | APC |
| CTNNB1 S45 mutants aren’t phosphorylated | 1 | 380.7× | 0.006 | APC |
| CTNNB1 T41 mutants aren’t phosphorylated | 1 | 380.7× | 0.006 | APC |
| Beta-catenin phosphorylation cascade | 1 | 335.9× | 0.006 | APC |
| Signaling by WNT in cancer | 1 | 300.5× | 0.007 | APC |
| Apoptotic cleavage of cellular proteins | 1 | 237.9× | 0.008 | APC |
| Apoptotic execution phase | 1 | 237.9× | 0.008 | APC |
| Disassembly of the destruction complex and recruitment of AXIN to the membrane | 1 | 178.4× | 0.010 | APC |
| Ovarian tumor domain proteases | 1 | 139.3× | 0.012 | APC |
| Deactivation of the beta-catenin transactivating complex | 1 | 116.5× | 0.013 | APC |
| Recognition and association of DNA glycosylase with site containing an affected purine | 1 | 102.0× | 0.014 | MUTYH |
| Cleavage of the damaged purine | 1 | 102.0× | 0.014 | MUTYH |
| Degradation of beta-catenin by the destruction complex | 1 | 86.5× | 0.016 | APC |
| Apoptosis | 1 | 84.0× | 0.016 | APC |
| Programmed Cell Death | 1 | 73.2× | 0.018 | APC |
| Deubiquitination | 1 | 62.1× | 0.020 | APC |
| TCF dependent signaling in response to WNT | 1 | 58.9× | 0.020 | APC |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 2 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| depurination | 1 | 2106.5× | 0.006 | MUTYH |
| regulation of microtubule-based movement | 1 | 1404.3× | 0.006 | APC |
| negative regulation of cell cycle G1/S phase transition | 1 | 1203.7× | 0.006 | APC |
| positive regulation of protein localization to centrosome | 1 | 1203.7× | 0.006 | APC |
| negative regulation of cyclin-dependent protein serine/threonine kinase activity | 1 | 1053.2× | 0.006 | APC |
| regulation of microtubule-based process | 1 | 936.2× | 0.006 | APC |
| regulation of attachment of spindle microtubules to kinetochore | 1 | 842.6× | 0.006 | APC |
| heart valve development | 1 | 766.0× | 0.006 | APC |
| positive regulation of pseudopodium assembly | 1 | 648.1× | 0.006 | APC |
| negative regulation of necroptotic process | 1 | 495.6× | 0.007 | MUTYH |
| endocardial cushion morphogenesis | 1 | 421.3× | 0.008 | APC |
| mismatch repair | 1 | 324.1× | 0.009 | MUTYH |
| mitotic spindle assembly checkpoint signaling | 1 | 280.9× | 0.009 | APC |
| cell fate specification | 1 | 263.3× | 0.009 | APC |
| negative regulation of microtubule depolymerization | 1 | 247.8× | 0.009 | APC |
| base-excision repair | 1 | 234.1× | 0.009 | MUTYH |
| pattern specification process | 1 | 234.1× | 0.009 | APC |
| negative regulation of G1/S transition of mitotic cell cycle | 1 | 179.3× | 0.011 | APC |
| bicellular tight junction assembly | 1 | 165.2× | 0.011 | APC |
| mitotic cytokinesis | 1 | 129.6× | 0.013 | APC |
| insulin receptor signaling pathway | 1 | 110.9× | 0.015 | APC |
| positive regulation of protein catabolic process | 1 | 101.5× | 0.016 | APC |
| positive regulation of cold-induced thermogenesis | 1 | 81.8× | 0.019 | APC |
| negative regulation of canonical Wnt signaling pathway | 1 | 58.9× | 0.024 | APC |
| protein-containing complex assembly | 1 | 56.9× | 0.024 | APC |
| Wnt signaling pathway | 1 | 49.9× | 0.027 | APC |
| DNA repair | 1 | 31.9× | 0.039 | MUTYH |
| positive regulation of cell migration | 1 | 30.9× | 0.039 | APC |
| cell migration | 1 | 30.8× | 0.039 | APC |
| positive regulation of apoptotic process | 1 | 28.4× | 0.041 | APC |
Therapeutics
Drug target analysis
Approved (phase 4): 0 · Phase ≥3: 0 · Phased (≥1): 0 · Undrugged: 2
Druggability breadth: 2 of 2 evidence-associated genes (100%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|---|---|
| APC | 0 | 0 |
| MUTYH | 0 | 0 |
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 0.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|---|---|
| APC | 24 | Binding:24 |
| MUTYH | 1 | Functional:1 |
Pharmacogenomics
Cohort genes with a PharmGKB record: 2; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Chemical tractability of cohort targets
0 approved/phased compounds have measured bioactivity against a cohort gene (and aren’t yet in disease-level trials). This is a research / tractability signal, NOT a therapeutic recommendation — a bioactivity row often reflects off-target or screening binding (e.g. promiscuous kinase inhibitors against a cohort kinase), implying no disease mechanism.
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|---|---|---|
| A | Approved (phase 4 drug) | 0 | |
| B | Phased (≥1) drug, not yet approved | 0 | |
| C | Druggable family + PDB, no drug | 0 | |
| D | Druggable family + AlphaFold only, no drug | 0 | |
| E | Difficult family or no structure, no drug | 2 | APC, MUTYH |
Undrugged target profiles
2 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
| Symbol | ChEMBL assays | Drugged partners (top 3) |
|---|---|---|
| APC | 24 | — |
| MUTYH | 1 | — |
Clinical trials & evidence
Clinical trials
Clinical trials: 89.
Phase distribution (across all retrieved trials)
| Phase | Trials |
|---|---|
| Not specified | 48 |
| PHASE2 | 18 |
| PHASE3 | 7 |
| PHASE1 | 6 |
| PHASE2/PHASE3 | 4 |
| PHASE4 | 2 |
| PHASE1/PHASE2 | 2 |
| EARLY_PHASE1 | 2 |
Top trials by phase / activity
| NCT | Phase | Status | Title |
|---|---|---|---|
| NCT00140894 | PHASE4 | TERMINATED | A Study of Rofecoxib in Familial Adenomatous Polyposis (FAP) (0966-205)(TERMINATED) |
| NCT04454151 | PHASE4 | UNKNOWN | Azithromycin Treatment for Readthrough of APC Gene Stop Codon Mutations in Familial Adenomatous Polyposis |
| NCT06545526 | PHASE3 | RECRUITING | Chemopreventive Effect of Combination of Celecoxib and Metformin in Patients With Familial Adenomatous Polyposis |
| NCT06782412 | PHASE2/PHASE3 | RECRUITING | Multicenter Validation Trial of [18F]AlF-FAPI-74 for PET Imaging of Cancer-associated Fibroblasts Through Fibroblast Activation Protein Inhibitors (FAPI) in Different Tumor Types |
| NCT06950385 | PHASE3 | RECRUITING | Phase 3 Trial of eRapa in Patients With Familial Adenomatous Polyposis |
| NCT00510692 | PHASE2/PHASE3 | COMPLETED | Chemoprevention Trial in Familial Adenomatous Polyposis (FAP) Coli Using EPA |
| NCT00585312 | PHASE3 | TERMINATED | Trial In Pediatric Patients With Familial Adenomatous Polyposis (FAP) |
| NCT00808743 | PHASE2/PHASE3 | COMPLETED | Prevention of Progression of Duodenal Adenomas in Patients With Familial Adenomatous Polyposis |
| NCT01245816 | PHASE3 | WITHDRAWN | A Trial of Low Dose Sulindac Combined With Eflornithine in Patients With Familial Adenomatous Polyposis (FAP) |
| NCT01483144 | PHASE3 | COMPLETED | Trial of Eflornithine Plus Sulindac in Patients With Familial Adenomatous Polyposis (FAP) |
| NCT01737398 | PHASE2/PHASE3 | COMPLETED | Efficacy and Safety of Inotersen in Familial Amyloid Polyneuropathy |
| NCT02175004 | PHASE3 | COMPLETED | Extension Study Assessing Long Term Safety and Efficacy of IONIS-TTR Rx in Familial Amyloid Polyneuropathy (FAP) |
| NCT03806426 | PHASE3 | UNKNOWN | Effect of EPA-FFA on Polypectomy in Familial Adenomatous Polyposis |
| NCT04230499 | PHASE2 | ACTIVE_NOT_RECRUITING | Trial of ERapa to Prevent Progression in Familial Adenomatous Polyposis Patients Under Active Surveillance |
| NCT05552755 | PHASE1/PHASE2 | RECRUITING | Evaluate REC-4881 in Participants With Familial Adenomatous Polyposis (FAP) |
| NCT05919264 | PHASE1/PHASE2 | RECRUITING | FOG-001 in Locally Advanced or Metastatic Solid Tumors |
| NCT06189820 | PHASE2 | RECRUITING | Role of the Fibroblast Activation Protein (FAP) as Biomarker of Fibrotic Lung Diseases |
| NCT06308445 | PHASE2 | NOT_YET_RECRUITING | Safety Study for the Use of Rapamycin in Children With Familial Adenomatous Polyposis |
| NCT06557733 | PHASE2 | RECRUITING | An Investigational Drug (TPST-1495) in Patients With Familial Adenomatous Polyposis |
| NCT00033371 | PHASE2 | COMPLETED | Celecoxib With or Without Eflornithine in Preventing Colorectal Cancer in Patients With Familial Adenomatous Polyposis |
| NCT00248053 | PHASE2 | WITHDRAWN | Use of Curcumin in the Lower Gastrointestinal Tract in Familial Adenomatous Polyposis Patients |
| NCT00319007 | PHASE2 | UNKNOWN | Influence of Sulindac and Probiotics on the Development of Pouch Adenomas in Patients With Familial Adenomatous Polyposis |
| NCT00503035 | PHASE2 | COMPLETED | Molecular Targeting of 15-Lipoxygenase-1 (15-LOX-1) for Apoptosis Induction in Human Colorectal Cancers |
| NCT00641147 | PHASE2 | COMPLETED | Curcumin in Treating Patients With Familial Adenomatous Polyposis |
| NCT01187901 | PHASE2 | COMPLETED | A Clinical Trial of COX and EGFR Inhibition in Familial Polyposis Patients |
| NCT01725490 | PHASE2 | COMPLETED | The Chemopreventive Effect of Metformin in Patients With Familial Adenomatous Polyposis: Double Blinded Randomized Controlled Study |
| NCT02961374 | PHASE2 | COMPLETED | Erlotinib Hydrochloride in Reducing Duodenal Polyp Burden in Patients With Familial Adenomatous Polyposis at Risk of Developing Colon Cancer |
| NCT03061591 | PHASE2 | UNKNOWN | Turmeric Supplementation on Polyp Number and Size in Patients With Familial Adenomatous Polyposis. |
| NCT03095703 | PHASE2 | COMPLETED | Sirolimus and Familial Adenomatous Polyposis (FAP) |
| NCT04296851 | PHASE2 | UNKNOWN | Niclosamide for Familial Adenomatous Polyposis |
| NCT05223036 | PHASE2 | TERMINATED | Testing Obeticholic Acid for Familial Adenomatous Polyposis |
| NCT05262855 | PHASE2 | COMPLETED | Study of [68Ga]FAPI-46 PET in Patients With Pancreatic Ductal Carcinoma |
| NCT05402891 | PHASE2 | COMPLETED | The CHAMP-study: The CHemopreventive Effect of Lithium in Familial AdenoMatous Polyposis |
| NCT05630794 | PHASE1 | RECRUITING | Testing for Safety and Colorectal Cancer Preventive Effects of ONC201 |
| NCT06640413 | PHASE1 | RECRUITING | A Study to Evaluate the Safety and Preliminary Signs of Efficacy of [177Lu]Lu-OncoFAP-23 Alone or in Combination With L19-IL2 as a Treatment of Metastatic FAP-positive Solid Tumors |
| NCT00770991 | PHASE1 | COMPLETED | Lyophilized Black Raspberries in Adults With Familial Adenomatous Polyposis (FAP) |
| NCT02113202 | PHASE1 | COMPLETED | Molecular Fluorescence Endoscopy in Patients With Familial Adenomatous Polyposis, Using Bevacizumab-IRDye800CW |
| NCT03649971 | PHASE1 | COMPLETED | A Study of Guselkumab in Participants With Familial Adenomatous Polyposis |
| NCT05014360 | PHASE1 | COMPLETED | A Study of JNJ-64251330 in Participants With Familial Adenomatous Polyposis |
| NCT06387381 | EARLY_PHASE1 | RECRUITING | 68Ga-PSFA PET Imaging in Patients With PSMA/FAP Positive Disease |
Drugs tested across these trials (top 30)
| Molecule | Max phase | Trials referencing |
|---|---|---|
| SULINDAC | 4 | 3 |
| EFLORNITHINE | 4 | 2 |
| GUSELKUMAB | 4 | 2 |
| INOTERSEN | 4 | 2 |
| THIAMINE ION | 4 | 2 |
| URSODIOL | 4 | 2 |
| AZITHROMYCIN | 4 | 1 |
| FLUOROESTRADIOL F-18 | 4 | 1 |
| INULIN | 4 | 1 |
| LITHIUM CARBONATE | 4 | 1 |
| NICLOSAMIDE | 4 | 1 |
| OBETICHOLIC ACID | 4 | 1 |
| TIPIRACIL | 4 | 1 |
| TRIFLURIDINE | 4 | 1 |
| CURCUMIN | 3 | 2 |
| GOZETOTIDE ALF-18 | 3 | 1 |
| L19IL2 | 3 | 1 |
| EFLORNITHINE, (S)- | 2 | 2 |
| DARLEUKIN | 2 | 1 |
| TAK-733 | 2 | 1 |
| DORDAVIPRONE HYDROCHLORIDE | 1 | 1 |
| CHEMBL4446459 | 0 | 2 |
| CHEMBL4299381 | 0 | 1 |
| CHEMBL5409583 | 0 | 1 |
| CHEMBL4303680 | 0 | 1 |
| CHEMBL5197244 | 0 | 1 |
| CHEMBL5412701 | 0 | 1 |
Related Atlas pages
- Cohort genes: APC, MUTYH
- Drugs: Sulindac, Eflornithine, Guselkumab, Inotersen, Thiamine Ion, Ursodiol, Azithromycin, FLUOROESTRADIOL F-18, Inulin, Lithium Carbonate, Niclosamide, Obeticholic Acid, Tipiracil, Trifluridine, Curcumin, GOZETOTIDE ALF-18, L19IL2, Dordaviprone