Combined oxidative phosphorylation deficiency
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Summary
Combined oxidative phosphorylation deficiency (MONDO:0000732) is a disease (an umbrella term covering 58 Mondo subtypes) with 6 cohort genes.
At a glance
- Umbrella term: 58 Mondo subtypes
- Cohort genes: 6
- ClinVar variants: 396
Clinical features
No curated clinical features (Orphanet) for this disease.
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | combined oxidative phosphorylation deficiency |
| Mondo ID | MONDO:0000732 |
| OMIM | 609060 |
| DOID | DOID:0060286 |
| ICD-11 | 1953023896 |
| UMLS | C4540031 |
| MedGen | 1626645 |
| GARD | 0012893 |
| Is cancer (heuristic) | no |
Data availability: 396 ClinVar variants · 2 GenCC gene-disease records.
Disease family
An umbrella term covering 58 Mondo subtypes.
Classification path: disease › human disease › disease by developmental or physiological process › metabolic disease › developmental anomaly of metabolic origin › inborn mitochondrial metabolism disorder › mitochondrial oxidative phosphorylation disorder › combined oxidative phosphorylation deficiency
Related subtypes (47): mitochondrial respiratory chain complex deficiency, myopathy, lactic acidosis, and sideroblastic anemia, optic atrophy 3, autosomal dominant optic atrophy, classic form, Leigh syndrome, mitochondrial non-syndromic sensorineural hearing loss, maternally-inherited diabetes and deafness, chronic diarrhea with villous atrophy, Kearns-Sayre syndrome, Leber hereditary optic neuropathy, NARP syndrome, deafness, aminoglycoside-induced, hereditary spastic paraplegia 7, spinocerebellar ataxia type 28, leukoencephalopathy with brain stem and spinal cord involvement-high lactate syndrome, spastic ataxia 3, pontocerebellar hypoplasia type 6, autosomal recessive optic atrophy, OPA7 type, acute infantile liver failure due to synthesis defect of mtDNA-encoded proteins, congenital cataract-progressive muscular hypotonia-hearing loss-developmental delay syndrome, spastic ataxia 4, hyperuricemia-pulmonary hypertension-renal failure-alkalosis syndrome, hereditary spastic paraplegia 55, cataract-growth hormone deficiency-sensory neuropathy-sensorineural hearing loss-skeletal dysplasia syndrome, Charcot-Marie-Tooth disease recessive intermediate D, autosomal dominant mitochondrial myopathy with exercise intolerance, Charcot-Marie-Tooth disease type 4K, hydrops-lactic acidosis-sideroblastic anemia-multisystemic failure syndrome, hereditary spastic paraplegia 77, fatal infantile encephalocardiomyopathy, FASTKD2-related infantile mitochondrial encephalomyopathy, autosomal dominant optic atrophy and peripheral neuropathy, ataxia neuropathy spectrum, maternally-inherited mitochondrial dystonia, Perrault syndrome, hypertrophic cardiomyopathy and renal tubular disease due to mitochondrial DNA mutation, adult-onset chronic progressive external ophthalmoplegia with mitochondrial myopathy, mitochondrial DNA maintenance syndrome, coenzyme Q10 deficiency, mitochondrial DNA depletion syndrome, periodic paralysis with later-onset distal motor neuropathy, non-progressive predominantly posterior cavitating leukoencephalopathy with peripheral neuropathy, Zellweger-like syndrome without peroxisomal anomalies, maternally-inherited progressive external ophthalmoplegia, Leber plus disease, encephalopathy due to mitochondrial and peroxisomal fission defect, severe neonatal lactic acidosis due to NFS1-ISD11 complex deficiency
Subtypes (58): severe X-linked mitochondrial encephalomyopathy, hepatoencephalopathy due to combined oxidative phosphorylation defect type 1, combined oxidative phosphorylation defect type 2, fatal mitochondrial disease due to combined oxidative phosphorylation defect type 3, combined oxidative phosphorylation defect type 4, hypotonia with lactic acidemia and hyperammonemia, combined oxidative phosphorylation defect type 7, combined oxidative phosphorylation defect type 8, combined oxidative phosphorylation defect type 9, mitochondrial hypertrophic cardiomyopathy with lactic acidosis due to MTO1 deficiency, combined oxidative phosphorylation defect type 11, leukoencephalopathy-thalamus and brainstem anomalies-high lactate syndrome, combined oxidative phosphorylation defect type 13, combined oxidative phosphorylation defect type 14, combined oxidative phosphorylation defect type 15, infantile hypertrophic cardiomyopathy due to MRPL44 deficiency, combined oxidative phosphorylation defect type 17, growth and developmental delay-hypotonia-vision impairment-lactic acidosis syndrome, combined oxidative phosphorylation deficiency 19, combined oxidative phosphorylation defect type 20, combined oxidative phosphorylation defect type 21, mitochondrial proton-transporting ATP synthase complex deficiency, combined oxidative phosphorylation defect type 23, combined oxidative phosphorylation defect type 24, combined oxidative phosphorylation defect type 25, combined oxidative phosphorylation defect type 26, combined oxidative phosphorylation defect type 27, combined oxidative phosphorylation deficiency 28, combined oxidative phosphorylation deficiency 29, combined oxidative phosphorylation defect type 30, lethal left ventricular non-compaction-seizures-hypotonia-cataract-developmental delay syndrome, combined oxidative phosphorylation deficiency 40, combined oxidative phosphorylation deficiency 41, combined oxidative phosphorylation deficiency 42, combined oxidative phosphorylation deficiency 43, combined oxidative phosphorylation deficiency 44, combined oxidative phosphorylation deficiency 52, combined oxidative phosphorylation deficiency 53, combined oxidative phosphorylation deficiency 54, combined oxidative phosphorylation deficiency 37, combined oxidative phosphorylation deficiency 38, combined oxidative phosphorylation deficiency 39, combined oxidative phosphorylation deficiency 45, combined oxidative phosphorylation deficiency 46, combined oxidative phosphorylation deficiency 47, combined oxidative phosphorylation deficiency 48, combined oxidative phosphorylation deficiency 51, combined oxidative phosphorylation deficiency 32, combined oxidative phosphorylation deficiency 33, combined oxidative phosphorylation deficiency 34, combined oxidative phosphorylation deficiency 35, combined oxidative phosphorylation deficiency 36, combined oxidative phosphorylation deficiency 55, combined oxidative phosphorylation deficiency 56, combined oxidative phosphorylation deficiency 57, combined oxidative phosphorylation deficiency 58, combined oxidative phosphorylation deficiency 59, combined oxidative phosphorylation deficiency 60
Genetics & variants
GWAS landscape
No GWAS associations recorded — common-variant (GWAS) studies don’t cover this disease (typical for Mendelian / rare diseases). See the curated gene cohort and Mendelian overlap below.
Variant details and genetic-evidence tiers
ClinVar germline variants
396 retrieved; paginated sample, class counts are floors:
178 likely benign, 154 uncertain significance, 24 conflicting classifications of pathogenicity, 19 benign/likely benign, 14 benign, 5 pathogenic/likely pathogenic, 2 likely pathogenic
| ClinVar | Variant (HGVS) | Gene | Classification | Review |
|---|---|---|---|---|
| 162479 | NM_004208.4(AIFM1):c.1264C>T (p.Arg422Trp) | AIFM1 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 374094 | NM_004208.4(AIFM1):c.1019T>C (p.Met340Thr) | AIFM1 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 30598 | NM_024996.7(GFM1):c.748C>T (p.Arg250Trp) | GFM1 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 509754 | NM_024996.7(GFM1):c.689+908G>A | GFM1 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 162480 | NM_004208.4(AIFM1):c.1265G>A (p.Arg422Gln) | RAB33A | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 2933356 | NM_004208.4(AIFM1):c.1195G>A (p.Gly399Ser) | AIFM1 | Likely pathogenic | criteria provided, single submitter |
| 162481 | NM_004208.4(AIFM1):c.1424C>T (p.Pro475Leu) | RAB33A | Likely pathogenic | criteria provided, single submitter |
| 1204071 | NM_004208.4(AIFM1):c.8G>A (p.Arg3Gln) | AIFM1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 1357142 | NM_004208.4(AIFM1):c.1663G>A (p.Val555Ile) | AIFM1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 162477 | NM_004208.4(AIFM1):c.1030C>T (p.Leu344Phe) | AIFM1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 1954172 | NM_004208.4(AIFM1):c.174T>A (p.Gly58=) | AIFM1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 2136048 | NM_004208.4(AIFM1):c.1020G>T (p.Met340Ile) | AIFM1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 214081 | NM_004208.4(AIFM1):c.1642C>T (p.Pro548Ser) | AIFM1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 2426260 | NC_000023.10:g.(?128674417)(129299630_?)del | AIFM1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 243069 | NM_004208.4(AIFM1):c.1388G>T (p.Arg463Ile) | AIFM1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 2934504 | NM_004208.4(AIFM1):c.258G>T (p.Lys86Asn) | AIFM1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 373913 | NM_004208.4(AIFM1):c.1646C>T (p.Ala549Val) | AIFM1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 411665 | NM_004208.4(AIFM1):c.1643C>T (p.Pro548Leu) | AIFM1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 518002 | NM_004208.4(AIFM1):c.1036G>A (p.Glu346Lys) | AIFM1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 547098 | NM_004208.4(AIFM1):c.556A>G (p.Asn186Asp) | AIFM1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 594797 | NM_004208.4(AIFM1):c.952G>A (p.Ala318Thr) | AIFM1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 640384 | NM_004208.4(AIFM1):c.1075+4G>C | AIFM1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 655000 | NM_004208.4(AIFM1):c.893G>A (p.Arg298Gln) | AIFM1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 660192 | NM_004208.4(AIFM1):c.141A>C (p.Glu47Asp) | AIFM1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 836326 | NM_004208.4(AIFM1):c.724A>G (p.Met242Val) | AIFM1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 857026 | NM_004208.4(AIFM1):c.340G>A (p.Ala114Thr) | AIFM1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 958283 | NM_004208.4(AIFM1):c.1045A>G (p.Ser349Gly) | AIFM1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 982823 | NM_004208.4(AIFM1):c.506C>T (p.Pro169Leu) | AIFM1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 445310 | NM_004208.4(AIFM1):c.170C>G (p.Ser57Cys) | RAB33A | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 641733 | NM_004208.4(AIFM1):c.1006G>A (p.Glu336Lys) | RAB33A | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 5 · Orphanet: 5 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
GenCC gene–disease validity (cohort genes)
the Disease column is the GenCC-asserted condition — a cohort gene’s strongest validity may be for a related predisposition syndrome.
| Gene | Classification | Inheritance | Disease | Records |
|---|---|---|---|---|
| OXA1L | Moderate | Autosomal recessive | combined oxidative phosphorylation deficiency | |
| TOMM70 | Limited | Autosomal recessive | combined oxidative phosphorylation deficiency | 4 |
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|---|---|
| GFM1 | Orphanet:137681 | Hepatoencephalopathy due to combined oxidative phosphorylation defect type 1 |
| AIFM1 | Orphanet:101078 | X-linked Charcot-Marie-Tooth disease type 4 |
| AIFM1 | Orphanet:139583 | X-linked hereditary sensory and autonomic neuropathy with deafness |
| AIFM1 | Orphanet:238329 | Severe X-linked mitochondrial encephalomyopathy |
| AIFM1 | Orphanet:83629 | Leukoencephalopathy-spondyloepimetaphyseal dysplasia syndrome |
Cohort genes → proteins
6 cohort genes, 6 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|---|
| multi_evidence | 6 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|---|---|---|---|---|
| TOMM70 | HGNC:11985 | ENSG00000154174 | O94826 | Mitochondrial import receptor subunit TOM70 | gencc |
| OXA1L | HGNC:8526 | ENSG00000155463 | Q15070 | Mitochondrial inner membrane protein OXA1L | gencc |
| GFM1 | HGNC:13780 | ENSG00000168827 | Q96RP9 | Elongation factor G, mitochondrial | clinvar |
| TAMM41 | HGNC:25187 | ENSG00000144559 | Q96BW9 | Phosphatidate cytidylyltransferase, mitochondrial | clinvar |
| AIFM1 | HGNC:8768 | ENSG00000156709 | O95831 | Apoptosis-inducing factor 1, mitochondrial | clinvar |
| RAB33A | HGNC:9773 | ENSG00000134594 | Q14088 | Ras-related protein Rab-33A | clinvar |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|---|---|
| TOMM70 | Mitochondrial import receptor subunit TOM70 | Acts as a receptor of the preprotein translocase complex of the outer mitochondrial membrane (TOM complex). |
| OXA1L | Mitochondrial inner membrane protein OXA1L | Mitochondrial membrane insertase that mediates the cotranslational insertion of integral membrane proteins into the mitochondrial inner membrane. |
| GFM1 | Elongation factor G, mitochondrial | Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. |
| TAMM41 | Phosphatidate cytidylyltransferase, mitochondrial | Catalyzes the conversion of phosphatidic acid (PA) to CDP-diacylglycerol (CDP-DAG), an essential intermediate in the synthesis of phosphatidylglycerol, cardiolipin and phosphatidylinositol. |
| AIFM1 | Apoptosis-inducing factor 1, mitochondrial | Functions both as NADH oxidoreductase and as regulator of apoptosis. |
| RAB33A | Ras-related protein Rab-33A | The small GTPases Rab are key regulators of intracellular membrane trafficking, from the formation of transport vesicles to their fusion with membranes. |
Protein-family classification
Druggable: 1 · Difficult: 0 · Unknown: 5 · Druggable fraction: 0.17
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|---|---|---|
| Other/Unknown | 5 | 1.5× | 0.348 |
| Enzyme (other) | 1 | 2.0× | 0.407 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|---|---|---|---|
| TOMM70 | Other/Unknown | no | TPR-like_helical_dom_sf, TPR_rpt | |
| OXA1L | Other/Unknown | no | YidC/ALB3/OXA1/COX18, YidC/Oxa/ALB_C | |
| GFM1 | Other/Unknown | no | EFG_V-like, T_Tr_GTP-bd_dom, EFTu-like_2 | |
| TAMM41 | Other/Unknown | no | Tam41 | |
| AIFM1 | Enzyme (other) | yes | 7.1.1.2 | FAD/NAD-linked_Rdtase_dimer_sf, FAD/NAD-binding_dom, AIF_C |
| RAB33A | Other/Unknown | no | Small_GTPase, Small_GTP-bd, P-loop_NTPase |
Expression context
Cohort genes with no expression data: 0.
4 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 0 |
| broad (>20) | 6 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|---|
| endothelial cell | 2 |
| Brodmann (1909) area 23 | 1 |
| gluteal muscle | 1 |
| body of pancreas | 1 |
| diaphragm | 1 |
| hindlimb stylopod muscle | 1 |
| adrenal tissue | 1 |
| biceps brachii | 1 |
| granulocyte | 1 |
| male germ line stem cell (sensu Vertebrata) in testis | 1 |
| primordial germ cell in gonad | 1 |
| adult mammalian kidney | 1 |
| apex of heart | 1 |
| heart left ventricle | 1 |
| C1 segment of cervical spinal cord | 1 |
| cortical plate | 1 |
| prefrontal cortex | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|---|---|---|---|
| TOMM70 | 299 | ubiquitous | marker | endothelial cell, gluteal muscle, Brodmann (1909) area 23 |
| OXA1L | 290 | ubiquitous | marker | hindlimb stylopod muscle, body of pancreas, diaphragm |
| GFM1 | 271 | ubiquitous | marker | endothelial cell, biceps brachii, adrenal tissue |
| TAMM41 | 136 | ubiquitous | yes | primordial germ cell in gonad, granulocyte, male germ line stem cell (sensu Vertebrata) in testis |
| AIFM1 | 273 | ubiquitous | marker | apex of heart, adult mammalian kidney, heart left ventricle |
| RAB33A | 207 | ubiquitous | yes | cortical plate, C1 segment of cervical spinal cord, prefrontal cortex |
Protein interactions among cohort
Intra-cohort edges: 1.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|---|
| GFM1 | 5,789 |
| AIFM1 | 4,780 |
| OXA1L | 2,947 |
| TOMM70 | 2,629 |
| RAB33A | 1,603 |
| TAMM41 | 869 |
Intra-cohort edges
| A | B | Sources |
|---|---|---|
| OXA1L | TOMM70 | string_interaction |
Structural data
PDB: 4 · AlphaFold-only: 2 · No structure: 0
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|---|---|
| AIFM1 | O95831 | 26 |
| OXA1L | Q15070 | 17 |
| GFM1 | Q96RP9 | 5 |
| TOMM70 | O94826 | 3 |
AlphaFold-only cohort genes (top 30 by pLDDT)
| Symbol | UniProt | pLDDT |
|---|---|---|
| RAB33A | Q14088 | 81.85 |
| TAMM41 | Q96BW9 | 73.42 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 13. Enrichment computed across 6 evidence-associated genes (4 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 4 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| Mitochondrial translation elongation | 2 | 63.4× | 0.005 | GFM1, OXA1L |
| PINK1-PRKN Mediated Mitophagy | 1 | 89.2× | 0.039 | TOMM70 |
| SARS-CoV-1 activates/modulates innate immune responses | 1 | 68.0× | 0.039 | TOMM70 |
| TBC/RABGAPs | 1 | 64.9× | 0.039 | RAB33A |
| DDX58/IFIH1-mediated induction of interferon-alpha/beta | 1 | 63.4× | 0.039 | TOMM70 |
| RAB geranylgeranylation | 1 | 43.3× | 0.039 | RAB33A |
| Mitochondrial protein import | 1 | 42.0× | 0.039 | TOMM70 |
| Complex I biogenesis | 1 | 41.4× | 0.039 | OXA1L |
| Mitochondrial translation initiation | 1 | 31.7× | 0.042 | OXA1L |
| Mitochondrial ribosome-associated quality control | 1 | 30.7× | 0.042 | OXA1L |
| Mitochondrial translation termination | 1 | 27.4× | 0.042 | OXA1L |
| SARS-CoV-2 activates/modulates innate and adaptive immune responses | 1 | 22.3× | 0.048 | TOMM70 |
| Ub-specific processing proteases | 1 | 13.3× | 0.073 | TOMM70 |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 6 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| protein import into mitochondrial intermembrane space | 1 | 936.2× | 0.009 | AIFM1 |
| response to thyroxine | 1 | 936.2× | 0.009 | TOMM70 |
| protein import into the intermembrane space via the disulfide relay system | 1 | 936.2× | 0.009 | AIFM1 |
| mitochondrial translational elongation | 1 | 702.2× | 0.009 | GFM1 |
| mitochondrial protein quality control | 1 | 702.2× | 0.009 | OXA1L |
| cardiolipin biosynthetic process | 1 | 561.7× | 0.009 | TAMM41 |
| protein insertion into mitochondrial inner membrane from matrix | 1 | 561.7× | 0.009 | OXA1L |
| mitochondrial respiratory chain complex assembly | 1 | 468.1× | 0.009 | AIFM1 |
| negative regulation of oxidoreductase activity | 1 | 468.1× | 0.009 | OXA1L |
| positive regulation of necroptotic process | 1 | 468.1× | 0.009 | AIFM1 |
| cellular response to aldosterone | 1 | 401.2× | 0.010 | AIFM1 |
| mitochondrial proton-transporting ATP synthase complex assembly | 1 | 351.1× | 0.010 | OXA1L |
| negative regulation of ATP-dependent activity | 1 | 280.9× | 0.011 | OXA1L |
| response to L-glutamate | 1 | 280.9× | 0.011 | AIFM1 |
| negative regulation of cell growth involved in cardiac muscle cell development | 1 | 234.1× | 0.011 | TOMM70 |
| CDP-diacylglycerol biosynthetic process | 1 | 216.1× | 0.011 | TAMM41 |
| protein insertion into mitochondrial inner membrane | 1 | 216.1× | 0.011 | TOMM70 |
| protein insertion into mitochondrial outer membrane | 1 | 216.1× | 0.011 | TOMM70 |
| Rab protein signal transduction | 1 | 165.2× | 0.014 | RAB33A |
| cellular response to nitric oxide | 1 | 156.0× | 0.014 | AIFM1 |
| antigen processing and presentation | 1 | 117.0× | 0.017 | RAB33A |
| protein import into mitochondrial matrix | 1 | 117.0× | 0.017 | TOMM70 |
| protein tetramerization | 1 | 104.0× | 0.018 | OXA1L |
| obsolete protein targeting to mitochondrion | 1 | 96.8× | 0.019 | TOMM70 |
| positive regulation of defense response to virus by host | 1 | 87.8× | 0.019 | TOMM70 |
| obsolete positive regulation of protein targeting to mitochondrion | 1 | 82.6× | 0.019 | TOMM70 |
| activation of innate immune response | 1 | 80.2× | 0.019 | TOMM70 |
| intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress | 1 | 80.2× | 0.019 | AIFM1 |
| mitochondrial respiratory chain complex I assembly | 1 | 68.5× | 0.021 | OXA1L |
| cellular response to estradiol stimulus | 1 | 68.5× | 0.021 | AIFM1 |
Therapeutics
Drug target analysis
Approved (phase 4): 0 · Phase ≥3: 0 · Phased (≥1): 0 · Undrugged: 6
Druggability breadth: 4 of 6 evidence-associated genes (67%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|---|---|
| TOMM70 | 0 | 0 |
| OXA1L | 0 | 0 |
| GFM1 | 0 | 0 |
| TAMM41 | 0 | 0 |
| AIFM1 | 0 | 0 |
| RAB33A | 0 | 0 |
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 1.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|---|---|
| TOMM70 | 2 | Binding:2 |
| AIFM1 | 2 | Binding:2 |
| OXA1L | 1 | Binding:1 |
| GFM1 | 1 | Binding:1 |
Cohort enzymes (BRENDA EC)
| Symbol | EC numbers | Names |
|---|---|---|
| AIFM1 | 7.1.1.2 | NADH:ubiquinone reductase (H+-translocating) |
Pharmacogenomics
Cohort genes with a PharmGKB record: 6; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Chemical tractability of cohort targets
0 approved/phased compounds have measured bioactivity against a cohort gene (and aren’t yet in disease-level trials). This is a research / tractability signal, NOT a therapeutic recommendation — a bioactivity row often reflects off-target or screening binding (e.g. promiscuous kinase inhibitors against a cohort kinase), implying no disease mechanism.
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|---|---|---|
| A | Approved (phase 4 drug) | 0 | |
| B | Phased (≥1) drug, not yet approved | 0 | |
| C | Druggable family + PDB, no drug | 1 | AIFM1 |
| D | Druggable family + AlphaFold only, no drug | 0 | |
| E | Difficult family or no structure, no drug | 5 | TOMM70, OXA1L, GFM1, TAMM41, RAB33A |
Undrugged target profiles
6 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
| Symbol | ChEMBL assays | Drugged partners (top 3) |
|---|---|---|
| TOMM70 | 2 | — |
| OXA1L | 1 | — |
| GFM1 | 1 | — |
| TAMM41 | 0 | — |
| AIFM1 | 2 | — |
| RAB33A | 0 | — |
Clinical trials & evidence
Clinical trials
Clinical trials: 0.