Diverticulitis
diseaseOn this page
Also known as digestive tract diverticulum inflammationinflammation of digestive tract diverticulum
Summary
Diverticulitis (MONDO:0004235) is a disease with 8 cohort genes (42 GWAS associations across 12 studies) and 106 clinical trials. Top therapeutic interventions include mesalamine, indocyanine green acid form, and tigecycline.
At a glance
- Cohort genes: 8
- GWAS associations: 42
- Clinical trials: 106
Clinical features
No curated clinical features (Orphanet) for this disease.
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | diverticulitis |
| Mondo ID | MONDO:0004235 |
| EFO | EFO:1001460 |
| MeSH | D004238 |
| DOID | DOID:7475 |
| NCIT | C26752 |
| SNOMED CT | 307496006 |
| UMLS | C0012813 |
| MedGen | 41629 |
| Is cancer (heuristic) | no |
Also known as: digestive tract diverticulum inflammation · inflammation of digestive tract diverticulum
Data availability: 42 GWAS associations (12 studies).
Disease family
An umbrella term covering 2 Mondo subtypes.
Classification path: disease › human disease › disease by body system or component › digestive system disorder › intestinal disorder › diverticulitis
Related subtypes (57): intestinal atresia, steatorrhea, angiodysplasia of intestine, endometriosis of intestine, hypertrophic pyloric stenosis, mucocele of appendix, gastroenteritis, intestinal obstruction, postgastrectomy syndrome, chronic intestinal vascular insufficiency, bowel dysfunction, irritable bowel syndrome, Whipple disease, inflammatory bowel disease, intestinal polyp, necrotizing enterocolitis, intestinal perforation, neurogenic bowel, pneumatosis cystoides intestinalis, volvulus of midgut, abetalipoproteinemia, aplasia cutis congenita-intestinal lymphangiectasia syndrome, trichohepatoenteric syndrome, protein-losing enteropathy, chronic diarrhea with villous atrophy, Satoyoshi syndrome, glucose-galactose malabsorption, congenital diarrhea 7 with exudative enteropathy, chronic atrial and intestinal dysrhythmia, congenital enterocyte heparan sulfate deficiency, short bowel syndrome, intractable diarrhea-choanal atresia-eye anomalies syndrome, solitary rectal ulcer syndrome, NK-cell enteropathy, chronic intestinal failure, intestinal lymphangiectasia, refractory celiac disease, eosinophilic gastrointestinal disease, cryptogenic multifocal ulcerous stenosing enteritis, chronic enteropathy associated with SLCO2A1 gene, cytosolic phospholipase-A2 alpha deficiency associated bleeding disorder, malakoplakia, malabsorption syndrome, ischemic bowel disorder, intestinal neoplasm, intestinal motility disease, 4-hydroxyphenylacetic aciduria, parasitic intestinal disorder, Aeromonas hydrophila intestinal disease, large intestine disorder, small intestine disorder, primary desmosis coli, isolated mesenteric vein thrombosis, collagenous sprue, visceral leiomyopathy, African degenerative, intestinal dysmotility syndrome, intestinal fistula
Subtypes (2): small intestine diverticulitis, diverticulitis of colon
Genetics & variants
GWAS landscape
42 GWAS associations across 12 studies. Top hits map to 19 distinct genes (as reported by GWAS).
Top associations by p-value
| rsID | p-value | Gene | Risk allele | Odds ratio |
|---|---|---|---|---|
| rs6704689 | 9e-38 | ARHGAP15 | G | 0.2 |
| rs4278879 | 3e-35 | ARHGAP15 | T | 0.22 |
| rs11894956 | 3e-24 | ARHGAP15 | A | 0.24 |
| rs11619840 | 2e-19 | NALF1 | C | 0.16 |
| rs12294208 | 3e-18 | CALCB | T | 0.12 |
| chr11:15055666 | 6e-17 | A | 0.13 | |
| rs10910384 | 2e-16 | SLC35F3 | A | 0.13 |
| rs7609897 | 2e-14 | COLQ | G | 0.14 |
| rs10928187 | 7e-12 | ARHGAP15 | G | 1.42 |
| rs115478735 | 9e-12 | ABO | A | 0.12 |
| rs4662208 | 3e-10 | ARHGAP15 | A | 1.46 |
| rs4662344 | 5e-09 | ARHGAP15 | T | 1.26 |
| rs9514637 | 5e-08 | NALF1 | G | 1.22 |
| rs7327483 | 8e-08 | LINC00375 | C | 2.55 |
| rs12671172 | 1e-07 | LINC01003 - 5S_rRNA | G | 0.67 |
| rs140843945 | 1e-07 | LINC02240 | A | 11.83 |
| rs67153654 | 2e-07 | NALF1 | T | 1.25 |
| rs56116508 | 2e-07 | ECM1P2 - U6 | C | 1.44 |
| rs143460556 | 2e-07 | LHX8 | G | 5.73 |
| rs80233487 | 2e-07 | CELF4 | A | 6.33 |
| rs9565028 | 3e-07 | NBEA | C | 0.79 |
| rs4657237 | 3e-07 | CCDC190 - RGS4 | C | 2.46 |
| rs6793498 | 3e-07 | SLC25A38 | G | 2.78 |
| rs144422193 | 3e-07 | RNU6-99P - LRRC4C | G | 3.93 |
| rs118017477 | 3e-07 | SYNPR | ? | |
| rs1945615 | 4e-07 | CALCB | A | 1.18 |
| rs77643000 | 4e-07 | Y_RNA - CXCR5 | C | 1.38 |
| rs78108838 | 4e-07 | LINC02674 - RAB11FIP2 | T | 3.87 |
| rs2272901 | 6e-07 | UST - TAB2 | G | 1.19 |
| rs74592875 | 6e-07 | BPNT2 - RNA5SP266 | A | 3.96 |
Top studies (by case count)
| Study | Lead author | Year | Cases | Controls | Title |
|---|---|---|---|---|---|
| GCST90476077 | Verma A | 2024 | 10,900 | 428,348 | Diversity and scale: Genetic architecture of 2068 traits in the VA Million Veteran Program. |
| GCST008256 | Sigurdsson S | 2017 | 2,764 | 245,951 | Sequence variants in ARHGAP15, COLQ and FAM155A associate with diverticular disease and diverticulitis. |
| GCST90478421 | Verma A | 2024 | 1,855 | 117,495 | Diversity and scale: Genetic architecture of 2068 traits in the VA Million Veteran Program. |
| GCST90480329 | Verma A | 2024 | 1,855 | 117,495 | Diversity and scale: Genetic architecture of 2068 traits in the VA Million Veteran Program. |
| GCST90478420 | Verma A | 2024 | 1,338 | 57,182 | Diversity and scale: Genetic architecture of 2068 traits in the VA Million Veteran Program. |
| GCST90652041 | Liu TY | 2025 | 821 | 188,622 | Diversity and longitudinal records: Genetic architecture of disease associations and polygenic risk in the Taiwanese Han population. |
| GCST90080246 | Backman JD | 2021 | 623 | 387,299 | Exome sequencing and analysis of 454,787 UK Biobank participants. |
| GCST90084232 | Backman JD | 2021 | 623 | 387,299 | Exome sequencing and analysis of 454,787 UK Biobank participants. |
| GCST90468125 | Loya H | 2025 | 0 | 0 | A scalable variational inference approach for increased mixed-model association power. |
| GCST90293094 | Joo YY | 2023 | 0 | 0 | Multi-ancestry genome- and phenome-wide association studies of diverticular disease in electronic health records with natural language processing enriched phenotyping algorithm. |
Variant details and genetic-evidence tiers
Tier distribution (top 50 variants)
| Tier | Variants |
|---|---|
| Tier 1: coding | 0 |
| Tier 2: splice/UTR | 1 |
| Tier 3: regulatory | 0 |
| Tier 4: intronic/intergenic | 37 |
MAF distribution
| Bucket | Variants |
|---|---|
| common (>=0.05) | 29 |
| low_freq (0.01-0.05) | 6 |
| rare (<0.01) | 1 |
| unknown | 2 |
Functional consequences
| Consequence | Count |
|---|---|
| intron_variant | 26 |
| intergenic_variant | 9 |
| unknown | 1 |
| non_coding_transcript_exon_variant | 1 |
| 3_prime_UTR_variant | 1 |
Top variants
| rsID | Chr | Pos | Alleles | MAF | Consequence | Gene | p-value | Tier |
|---|---|---|---|---|---|---|---|---|
| rs6704689 | 2 | 143548105 | G>A | 0.178 | intron_variant | ARHGAP15 | 9e-38 | Tier 4: intronic/intergenic |
| rs4278879 | 2 | 143541673 | T>A,C,G | 0.185 | intron_variant | ARHGAP15 | 3e-35 | Tier 4: intronic/intergenic |
| rs11894956 | 2 | 143578563 | T>A,C | 0.179 | intron_variant | ARHGAP15 | 3e-24 | Tier 4: intronic/intergenic |
| rs11619840 | 13 | 107566610 | C>A,G | 0.184 | intron_variant | NALF1 | 2e-19 | Tier 4: intronic/intergenic |
| rs12294208 | 11 | 15030109 | T>C | 0.281 | intergenic_variant | CALCB | 3e-18 | Tier 4: intronic/intergenic |
| chr11:15055666 | 0.274 | 6e-17 | Tier 4: intronic/intergenic | |||||
| rs10910384 | 1 | 234217307 | A>C,G,T | 0.234 | intron_variant | SLC35F3 | 2e-16 | Tier 4: intronic/intergenic |
| rs7609897 | 3 | 15461174 | G>C,T | 0.225 | intron_variant | COLQ | 2e-14 | Tier 4: intronic/intergenic |
| rs10928187 | 2 | 143594975 | G>A | 0.225 | intron_variant | ARHGAP15 | 7e-12 | Tier 4: intronic/intergenic |
| rs115478735 | 9 | 133274295 | A>T | 0.193 | intron_variant | ABO | 9e-12 | Tier 4: intronic/intergenic |
| rs4662208 | 2 | 143580879 | A>C,G | 0.177 | intron_variant | ARHGAP15 | 3e-10 | Tier 4: intronic/intergenic |
| rs4662344 | 2 | 143591289 | T>A,C | 0.177 | intron_variant | ARHGAP15 | 5e-09 | Tier 4: intronic/intergenic |
| rs9514637 | 13 | 107249894 | G>A | 0.276 | intron_variant | NALF1 | 5e-08 | Tier 4: intronic/intergenic |
| rs7327483 | 13 | 85148036 | C>A,G,T | 0.297 | intron_variant | LINC00375 | 8e-08 | Tier 4: intronic/intergenic |
| rs12671172 | 7 | 152580506 | C>G,T | 0.185 | intron_variant | LINC01003 - 5S_rRNA | 1e-07 | Tier 4: intronic/intergenic |
| rs140843945 | 5 | 125335669 | T>A,C | 0.028 | intron_variant | LINC02240 | 1e-07 | Tier 4: intronic/intergenic |
| rs67153654 | 13 | 107572636 | T>A,C | 0.186 | intron_variant | NALF1 | 2e-07 | Tier 4: intronic/intergenic |
| rs56116508 | 4 | 12668237 | A>C,G | 0.104 | intergenic_variant | ECM1P2 - U6 | 2e-07 | Tier 4: intronic/intergenic |
| rs143460556 | 1 | 75159713 | A>G | 0.033 | intron_variant | LHX8 | 2e-07 | Tier 4: intronic/intergenic |
| rs80233487 | 18 | 37297238 | G>A | 0.023 | intron_variant | CELF4 | 2e-07 | Tier 4: intronic/intergenic |
| rs9565028 | 13 | 35130813 | G>C | 0.415 | intron_variant | NBEA | 3e-07 | Tier 4: intronic/intergenic |
| rs4657237 | 1 | 162910977 | T>C | 0.415 | intron_variant | CCDC190 - RGS4 | 3e-07 | Tier 4: intronic/intergenic |
| rs6793498 | 3 | 39394869 | C>G | 0.181 | intron_variant | SLC25A38 | 3e-07 | Tier 4: intronic/intergenic |
| rs144422193 | 11 | 39868675 | A>G | 0.057 | intergenic_variant | RNU6-99P - LRRC4C | 3e-07 | Tier 4: intronic/intergenic |
| rs118017477 | 3 | 63405587 | C>G | intron_variant | SYNPR | 3e-07 | Tier 4: intronic/intergenic | |
| rs1945615 | 11 | 15081931 | G>A | 0.302 | intergenic_variant | CALCB | 4e-07 | Tier 4: intronic/intergenic |
| rs77643000 | 11 | 118878854 | T>C | 0.131 | intergenic_variant | Y_RNA - CXCR5 | 4e-07 | Tier 4: intronic/intergenic |
| rs78108838 | 10 | 117980781 | G>A,T | 0.07 | intergenic_variant | LINC02674 - RAB11FIP2 | 4e-07 | Tier 4: intronic/intergenic |
| rs2272901 | 6 | 149218637 | G>A | 0.279 | non_coding_transcript_exon_variant | UST - TAB2 | 6e-07 | Tier 4: intronic/intergenic |
| rs74592875 | 8 | 57101541 | G>A | 0.044 | intergenic_variant | BPNT2 - RNA5SP266 | 6e-07 | Tier 4: intronic/intergenic |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 0 · Orphanet: 4 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|---|---|
| TAB2 | Orphanet:664401 | Cardiac anomalies-short stature-joint hypermobility-facial dysmorphism syndrome due to TAB2 mutation |
| TAB2 | Orphanet:664404 | 6q25.1 microdeletion syndrome |
| COLQ | Orphanet:98915 | Synaptic congenital myasthenic syndrome |
| NID1 | Orphanet:269215 | Isolated Dandy-Walker malformation without hydrocephalus |
Cohort genes → proteins
8 cohort genes, 8 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|---|
| gwas_only | 8 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|---|---|---|---|---|
| CALCB | HGNC:1438 | ENSG00000175868 | P10092 | Calcitonin gene-related peptide 2 | gwas |
| TAB2 | HGNC:17075 | ENSG00000055208 | Q9NYJ8 | TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 | gwas |
| LSM10 | HGNC:17562 | ENSG00000181817 | Q969L4 | U7 snRNA-associated Sm-like protein LSm10 | gwas |
| ARHGAP15 | HGNC:21030 | ENSG00000075884 | Q53QZ3 | Rho GTPase-activating protein 15 | gwas |
| COLQ | HGNC:2226 | ENSG00000206561 | Q9Y215 | Acetylcholinesterase collagenic tail peptide | gwas |
| NALF1 | HGNC:33877 | ENSG00000204442 | B1AL88 | NALCN channel auxiliary factor 1 | gwas |
| NID1 | HGNC:7821 | ENSG00000116962 | P14543 | Nidogen-1 | gwas |
| PDE7B | HGNC:8792 | ENSG00000171408 | Q9NP56 | 3’,5’-cyclic-AMP phosphodiesterase 7B | gwas |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|---|---|
| CALCB | Calcitonin gene-related peptide 2 | CALCB/CGRP2 is a peptide hormone that induces vasodilation mediated by the CALCRL-RAMP1 receptor complex. |
| TAB2 | TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 | Adapter required to activate the JNK and NF-kappa-B signaling pathways through the specific recognition of ‘Lys-63’-linked polyubiquitin chains by its RanBP2-type zinc finger (NZF). |
| LSM10 | U7 snRNA-associated Sm-like protein LSm10 | Appears to function in the U7 snRNP complex that is involved in histone 3’-end processing. |
| ARHGAP15 | Rho GTPase-activating protein 15 | GTPase activator for the Rho-type GTPases by converting them to an inactive GDP-bound state. |
| COLQ | Acetylcholinesterase collagenic tail peptide | Anchors the catalytic subunits of asymmetric AChE to the synaptic basal membrane, and is therefore involved in the down-regulation of colinergic synaptic transmission. |
| NALF1 | NALCN channel auxiliary factor 1 | Auxillary component of the NALCN sodium channel complex, a channel that regulates the resting membrane potential and controls neuronal excitability. |
| NID1 | Nidogen-1 | Sulfated glycoprotein widely distributed in basement membranes and tightly associated with laminin. |
| PDE7B | 3’,5’-cyclic-AMP phosphodiesterase 7B | Hydrolyzes the second messenger cAMP, which is a key regulator of many important physiological processes. |
Protein-family classification
Druggable: 0 · Difficult: 3 · Unknown: 5 · Druggable fraction: 0.0
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|---|---|---|
| Scaffold/PPI | 1 | 2.2× | 0.496 |
| Transcription factor | 2 | 2.1× | 0.496 |
| Other/Unknown | 5 | 1.1× | 0.496 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|---|---|---|---|
| CALCB | Other/Unknown | no | Calcitonin_peptide-like, Calcitonin_gene-rel_peptide, Calcitonin_CS | |
| TAB2 | Transcription factor | no | Znf_RanBP2, CUE, Znf_RanBP2_sf | |
| LSM10 | Other/Unknown | no | Sm_dom_euk/arc, LSM_dom_sf, Sm | |
| ARHGAP15 | Scaffold/PPI | no | RhoGAP_dom, PH_domain, Rho_GTPase_activation_prot | |
| COLQ | Other/Unknown | no | Collagen, Myxo_disulph_rpt, Collagen_superfamily | |
| NALF1 | Other/Unknown | no | NALCN_aux_factor_1/2 | |
| NID1 | Other/Unknown | no | LDLR_classB_rpt, EGF-type_Asp/Asn_hydroxyl_site, Thyroglobulin_1 | |
| PDE7B | Transcription factor | no | 3.1.4.53 | PDEase_catalytic_dom, HD/PDEase_dom, PDEase |
Expression context
Cohort genes with no expression data: 0.
7 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 0 |
| broad (>20) | 8 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|---|
| granulocyte | 3 |
| hindlimb stylopod muscle | 2 |
| dorsal root ganglion | 1 |
| islet of Langerhans | 1 |
| trigeminal ganglion | 1 |
| colonic epithelium | 1 |
| parotid gland | 1 |
| ventricular zone | 1 |
| gastrocnemius | 1 |
| blood | 1 |
| bone marrow cell | 1 |
| right uterine tube | 1 |
| Brodmann (1909) area 23 | 1 |
| buccal mucosa cell | 1 |
| endothelial cell | 1 |
| lower lobe of lung | 1 |
| mucosa of stomach | 1 |
| stromal cell of endometrium | 1 |
| calcaneal tendon | 1 |
| germinal epithelium of ovary | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|---|---|---|---|
| CALCB | 122 | broad | yes | dorsal root ganglion, trigeminal ganglion, islet of Langerhans |
| TAB2 | 293 | ubiquitous | marker | parotid gland, ventricular zone, colonic epithelium |
| LSM10 | 245 | ubiquitous | marker | hindlimb stylopod muscle, gastrocnemius, granulocyte |
| ARHGAP15 | 207 | broad | marker | blood, bone marrow cell, granulocyte |
| COLQ | 178 | broad | marker | right uterine tube, hindlimb stylopod muscle, granulocyte |
| NALF1 | 187 | broad | marker | endothelial cell, Brodmann (1909) area 23, buccal mucosa cell |
| NID1 | 262 | ubiquitous | marker | stromal cell of endometrium, mucosa of stomach, lower lobe of lung |
| PDE7B | 233 | ubiquitous | marker | germinal epithelium of ovary, calcaneal tendon, lateral globus pallidus |
Protein interactions among cohort
Intra-cohort edges: 3.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|---|
| TAB2 | 2,606 |
| LSM10 | 1,724 |
| NID1 | 1,702 |
| ARHGAP15 | 1,627 |
| COLQ | 1,132 |
| PDE7B | 890 |
| NALF1 | 662 |
| CALCB | 548 |
Intra-cohort edges
| A | B | Sources |
|---|---|---|
| ARHGAP15 | COLQ | string_interaction |
| ARHGAP15 | NALF1 | string_interaction |
| COLQ | NALF1 | string_interaction |
Structural data
PDB: 5 · AlphaFold-only: 3 · No structure: 0
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|---|---|
| TAB2 | Q9NYJ8 | 6 |
| LSM10 | Q969L4 | 5 |
| NALF1 | B1AL88 | 5 |
| ARHGAP15 | Q53QZ3 | 1 |
| COLQ | Q9Y215 | 1 |
AlphaFold-only cohort genes (top 30 by pLDDT)
| Symbol | UniProt | pLDDT |
|---|---|---|
| PDE7B | Q9NP56 | 79.84 |
| NID1 | P14543 | 78.50 |
| CALCB | P10092 | 71.15 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 72. Enrichment computed across 8 evidence-associated genes (6 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 6 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| SLBP independent Processing of Histone Pre-mRNAs | 1 | 190.3× | 0.052 | LSM10 |
| IRAK2 mediated activation of TAK1 complex | 1 | 190.3× | 0.052 | TAB2 |
| Calcitonin-like ligand receptors | 1 | 173.0× | 0.052 | CALCB |
| Processing of Capped Intronless Pre-mRNA | 1 | 173.0× | 0.052 | LSM10 |
| SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs | 1 | 173.0× | 0.052 | LSM10 |
| TICAM1,TRAF6-dependent induction of TAK1 complex | 1 | 173.0× | 0.052 | TAB2 |
| Alpha-protein kinase 1 signaling pathway | 1 | 173.0× | 0.052 | TAB2 |
| G alpha (s) signalling events | 2 | 24.4× | 0.052 | CALCB, PDE7B |
| IRAK2 mediated activation of TAK1 complex upon TLR7/8 or 9 stimulation | 1 | 126.9× | 0.060 | TAB2 |
| TRAF6-mediated induction of TAK1 complex within TLR4 complex | 1 | 119.0× | 0.060 | TAB2 |
| JNK (c-Jun kinases) phosphorylation and activation mediated by activated human TAK1 | 1 | 86.5× | 0.062 | TAB2 |
| TCR signaling | 1 | 82.8× | 0.062 | TAB2 |
| activated TAK1 mediates p38 MAPK activation | 1 | 82.8× | 0.062 | TAB2 |
| TNF signaling | 1 | 70.5× | 0.062 | TAB2 |
| Laminin interactions | 1 | 63.4× | 0.062 | NID1 |
| Nucleotide-binding domain, leucine rich repeat containing receptor (NLR) signaling pathways | 1 | 59.5× | 0.062 | TAB2 |
| Nuclear signaling by ERBB4 | 1 | 57.7× | 0.062 | TAB2 |
| TNFR1-induced NF-kappa-B signaling pathway | 1 | 56.0× | 0.062 | TAB2 |
| NOD1/2 Signaling Pathway | 1 | 52.9× | 0.062 | TAB2 |
| MAP kinase activation | 1 | 51.4× | 0.062 | TAB2 |
| TAK1-dependent IKK and NF-kappa-B activation | 1 | 50.1× | 0.062 | TAB2 |
| Signaling by ERBB4 | 1 | 45.3× | 0.062 | TAB2 |
| Fc epsilon receptor (FCERI) signaling | 1 | 45.3× | 0.062 | TAB2 |
| Interleukin-1 family signaling | 1 | 45.3× | 0.062 | TAB2 |
| Interleukin-17 signaling | 1 | 42.3× | 0.062 | TAB2 |
| C-type lectin receptors (CLRs) | 1 | 39.6× | 0.062 | TAB2 |
| RNA Polymerase II Transcription Termination | 1 | 36.6× | 0.062 | LSM10 |
| Toll Like Receptor 10 (TLR10) Cascade | 1 | 35.9× | 0.062 | TAB2 |
| Toll Like Receptor 5 (TLR5) Cascade | 1 | 35.9× | 0.062 | TAB2 |
| MyD88 cascade initiated on plasma membrane | 1 | 34.0× | 0.062 | TAB2 |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 8 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| acetylcholine catabolic process in synaptic cleft | 1 | 1053.2× | 0.019 | COLQ |
| negative regulation of synaptic transmission, cholinergic | 1 | 702.2× | 0.019 | COLQ |
| mRNA 3’-end processing by stem-loop binding and cleavage | 1 | 351.1× | 0.019 | LSM10 |
| regulation of basement membrane organization | 1 | 351.1× | 0.019 | NID1 |
| calcitonin gene-related peptide receptor signaling pathway | 1 | 351.1× | 0.019 | CALCB |
| cAMP catabolic process | 1 | 234.1× | 0.019 | PDE7B |
| skeletal muscle acetylcholine-gated channel clustering | 1 | 234.1× | 0.019 | COLQ |
| establishment of protein localization to membrane | 1 | 234.1× | 0.019 | COLQ |
| regulation of synaptic assembly at neuromuscular junction | 1 | 210.7× | 0.019 | COLQ |
| glomerular basement membrane development | 1 | 191.5× | 0.019 | NID1 |
| positive regulation of integrin-mediated signaling pathway | 1 | 162.0× | 0.021 | NID1 |
| positive regulation of muscle cell differentiation | 1 | 140.4× | 0.022 | NID1 |
| non-canonical NF-kappaB signal transduction | 1 | 105.3× | 0.027 | TAB2 |
| protein localization to synapse | 1 | 95.8× | 0.027 | COLQ |
| positive regulation of protein kinase activity | 1 | 84.3× | 0.029 | TAB2 |
| negative regulation of cAMP/PKA signal transduction | 1 | 75.2× | 0.031 | PDE7B |
| calcium ion import across plasma membrane | 1 | 68.0× | 0.031 | NALF1 |
| basement membrane organization | 1 | 63.8× | 0.031 | NID1 |
| positive regulation of cell-substrate adhesion | 1 | 62.0× | 0.031 | NID1 |
| positive regulation of G1/S transition of mitotic cell cycle | 1 | 50.1× | 0.036 | LSM10 |
| regulation of cytosolic calcium ion concentration | 1 | 47.9× | 0.036 | CALCB |
| positive regulation of cell adhesion | 1 | 34.0× | 0.049 | NID1 |
| negative regulation of autophagy | 1 | 32.4× | 0.049 | TAB2 |
| small GTPase-mediated signal transduction | 1 | 22.9× | 0.066 | ARHGAP15 |
| cell-matrix adhesion | 1 | 20.4× | 0.071 | NID1 |
| intracellular calcium ion homeostasis | 1 | 18.2× | 0.074 | CALCB |
| regulation of small GTPase mediated signal transduction | 1 | 18.0× | 0.074 | ARHGAP15 |
| response to lipopolysaccharide | 1 | 15.6× | 0.081 | TAB2 |
| regulation of cell shape | 1 | 15.4× | 0.081 | ARHGAP15 |
| adenylate cyclase-activating G protein-coupled receptor signaling pathway | 1 | 14.1× | 0.085 | CALCB |
Therapeutics
Drugs indicated for this disease
0 approved, 1 in late-stage (phase 3) trials. Disease-direct ChEMBL indications, not inferred from the associated-gene cohort below.
| Drug | Development status |
|---|---|
| Mesalamine | Phase 3 (in late-stage trials) |
Earlier-phase candidates (phase 2, investigational — efficacy not yet established): Rifaximin.
Drug target analysis
Approved (phase 4): 1 · Phase ≥3: 1 · Phased (≥1): 1 · Undrugged: 7
Druggability breadth: 3 of 8 evidence-associated genes (38%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Genes with an approved drug
The molecule shown is one approved compound that hits the gene — not necessarily a drug of choice or one indicated for this disease.
| Symbol | Example approved molecule |
|---|---|
| PDE7B | VARDENAFIL |
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|---|---|
| PDE7B | 3 | 4 |
| CALCB | 0 | 0 |
| TAB2 | 0 | 0 |
| LSM10 | 0 | 0 |
| ARHGAP15 | 0 | 0 |
| COLQ | 0 | 0 |
| NALF1 | 0 | 0 |
| NID1 | 0 | 0 |
Drugs targeting cohort genes (top 30)
| Molecule | Max phase | Targets in cohort |
|---|---|---|
| VARDENAFIL | 4 | PDE7B |
| DIPYRIDAMOLE | 4 | PDE7B |
| LENRISPODUN PHOSPHATE | 1 | PDE7B |
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 1.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|---|---|
| PDE7B | 89 | Binding:83, ADMET:4, Functional:1, Toxicity:1 |
| CALCB | 1 | Binding:1 |
| TAB2 | 1 | Binding:1 |
Cohort enzymes (BRENDA EC)
| Symbol | EC numbers | Names |
|---|---|---|
| PDE7B | 3.1.4.53 | 3’,5’-cyclic-AMP phosphodiesterase |
Pharmacogenomics
Cohort genes with a PharmGKB record: 8; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Chemical tractability of cohort targets
3 approved/phased compounds have measured bioactivity against a cohort gene (and aren’t yet in disease-level trials). This is a research / tractability signal, NOT a therapeutic recommendation — a bioactivity row often reflects off-target or screening binding (e.g. promiscuous kinase inhibitors against a cohort kinase), implying no disease mechanism.
| Compound | Max phase | Cohort target (bioactivity) |
|---|---|---|
| VARDENAFIL | 4 | PDE7B |
| DIPYRIDAMOLE | 4 | PDE7B |
| LENRISPODUN PHOSPHATE | 1 | PDE7B |
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|---|---|---|
| A | Approved (phase 4 drug) | 1 | PDE7B |
| B | Phased (≥1) drug, not yet approved | 0 | |
| C | Druggable family + PDB, no drug | 0 | |
| D | Druggable family + AlphaFold only, no drug | 0 | |
| E | Difficult family or no structure, no drug | 7 | CALCB, TAB2, LSM10, ARHGAP15, COLQ, NALF1, NID1 |
Undrugged target profiles
7 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
| Symbol | ChEMBL assays | Drugged partners (top 3) |
|---|---|---|
| CALCB | 1 | — |
| TAB2 | 1 | — |
| LSM10 | 0 | — |
| ARHGAP15 | 0 | — |
| COLQ | 0 | — |
| NALF1 | 0 | — |
| NID1 | 0 | — |
Clinical trials & evidence
Clinical trials
Clinical trials: 106.
Phase distribution (across all retrieved trials)
| Phase | Trials |
|---|---|
| Not specified | 78 |
| PHASE4 | 10 |
| PHASE3 | 7 |
| PHASE2 | 5 |
| PHASE2/PHASE3 | 2 |
| EARLY_PHASE1 | 2 |
| PHASE1/PHASE2 | 1 |
| PHASE1 | 1 |
Top trials by phase / activity
| NCT | Phase | Status | Title |
|---|---|---|---|
| NCT00195351 | PHASE4 | COMPLETED | Study Comparing Tigecycline Versus Ceftriaxone Sodium Plus Metronidazole in Complicated Intra-abdominal Infection |
| NCT00230971 | PHASE4 | COMPLETED | Study Comparing Tigecycline Versus Ceftriaxone Sodium Plus Metronidazole in Complicated Intra-abdominal Infection (cIAI) |
| NCT00453830 | PHASE4 | COMPLETED | Laparoscopic Versus Open Sigmoid Colectomy for Diverticular Disease |
| NCT00917592 | PHASE4 | COMPLETED | Trial Assessing the Efficacy of a Short Course of Intravenous Antibiotic Followed by Oral Antibiotic in Uncomplicated Acute Diverticulitis |
| NCT01056913 | PHASE4 | COMPLETED | NITI CAR27 (ColonRing) Compression Anastomosis in Colorectal Surgery |
| NCT01081054 | PHASE4 | COMPLETED | Hospitalization or Ambulatory Treatment of Acute Diverticulitis |
| NCT01111253 | PHASE4 | UNKNOWN | Diverticulitis: Antibiotics or Close Observation? |
| NCT02052557 | PHASE4 | COMPLETED | The Effect of Exparel on Post Operative Pain and Narcotic Use After Colon Surgery |
| NCT02246361 | PHASE4 | COMPLETED | Impact of Six Patient Information Leaflets (PIL) on Doctor Patient Communication |
| NCT02785549 | PHASE4 | COMPLETED | Randomized Clinical Trial to Compare the Treatment of Mild Acute Diverticulitis With or Without Antibiotics |
| NCT00467922 | PHASE3 | COMPLETED | An Assessment of Goal-Directed Intraoperative Fluid Management in Hand Assisted Laparoscopic Colectomy |
| NCT00545103 | PHASE3 | COMPLETED | Prevention of Recurrence of Diverticulitis |
| NCT00545740 | PHASE3 | COMPLETED | Prevention of Recurrence of Diverticulitis |
| NCT00695643 | PHASE3 | TERMINATED | Mesalazine Granules vs. Placebo for the Prevention of Recurrence of Diverticulitis |
| NCT01038739 | PHASE3 | TERMINATED | Two Doses Mesalazine Granules Versus Placebo for the Prevention of Recurrence of Diverticulitis |
| NCT01168154 | PHASE3 | UNKNOWN | Role Of Lactobacillus Reuteri DSM 17938 In The Non-Complicated Diverticular Disease |
| NCT01233713 | PHASE2/PHASE3 | COMPLETED | Hartmann’s Versus Primary Anastomosis in Left-sided Colon Perforation |
| NCT01727388 | PHASE3 | COMPLETED | Informativeness to Digital Rectal Examination |
| NCT03469050 | PHASE2/PHASE3 | TERMINATED | Rifaximin Delayed Release for the Prevention of Recurrent Acute Diverticulitis and Diverticular Complications. |
| NCT06687382 | PHASE2 | RECRUITING | Clinical Trial With MBK-01, Intestinal Microbiota Capsules, for the Treatment of Patients With Recurrent Diverticulitis |
| NCT00497263 | PHASE2 | COMPLETED | End-to-End Compression Anastomosis for Left-sided Colectomy Endo-CAR Study |
| NCT00554099 | PHASE2 | COMPLETED | Asacol Acute Diverticulitis(DIVA)Study |
| NCT01155440 | PHASE2 | COMPLETED | Bowel Function After Laparoscopic Colon Surgery: Effect of IV Lidocaine |
| NCT01477190 | PHASE1/PHASE2 | COMPLETED | Spinal Analgesia for Colonic Resection Using an Enhanced Recovery After Surgery (ERAS) Program |
| NCT05596214 | PHASE2 | UNKNOWN | Combination of Curcumin and Berberine Therapy in the Treatment of Post Acute Diverticulitis (SUDD) |
| NCT01560377 | PHASE1 | COMPLETED | Perfusion Assessment in Laparoscopic Left Anterior Resection |
| NCT05373784 | EARLY_PHASE1 | ACTIVE_NOT_RECRUITING | FMT in Uncomplicated Diverticulitis |
| NCT03042091 | EARLY_PHASE1 | UNKNOWN | Neomycin and Metronidazole Hydrochloride With or Without Polyethylene Glycol in Reducing Infection in Patients Undergoing Elective Colorectal Surgery |
| NCT03643718 | Not specified | RECRUITING | Web-based International Register of Emergency Surgery and Trauma |
| NCT04013152 | Not specified | ACTIVE_NOT_RECRUITING | Clinical Database of Colorectal Robotic Surgery |
| NCT04095663 | Not specified | ACTIVE_NOT_RECRUITING | Comparison of Surgery and Medicine on the Impact of Diverticulitis (COSMID) Trial |
| NCT05681559 | Not specified | ACTIVE_NOT_RECRUITING | Investigation of Medical Management to Prevent Episodes of Diverticulitis Trial |
| NCT05829343 | Not specified | RECRUITING | RObotic Versus LAparoscopic Colectomy for DIverticulitis. |
| NCT06023004 | Not specified | ACTIVE_NOT_RECRUITING | The Diverticulitis Study |
| NCT06265649 | Not specified | RECRUITING | Comparison of NOM for ACLD Between Medical and Surgical Ward |
| NCT06957236 | Not specified | ENROLLING_BY_INVITATION | Surgical Site Infection Outcomes in Natural Orifice Intracorporeal Anastomosis and Extraction (NICE) Procedure - The NICE Trial |
| NCT07027007 | Not specified | NOT_YET_RECRUITING | Prospective Observational Analysis of Circulating Endocan Levels in Patients Presenting With Acute Diverticulitis |
| NCT07144683 | Not specified | RECRUITING | Anastomotic Leakage After Colorectal Surgery. |
| NCT07506005 | Not specified | RECRUITING | Anastomotic Bleeding in Colorectal Anastomosis Relating to the Placement of the Stapler Spike to the Staple Line |
| NCT07579312 | Not specified | RECRUITING | Diagnosis of Abdominal Pain Using RNA Levels: The NATURAL Study |
Drugs tested across these trials (top 30)
| Molecule | Max phase | Trials referencing |
|---|---|---|
| MESALAMINE | 4 | 3 |
| INDOCYANINE GREEN ACID FORM | 4 | 2 |
| TIGECYCLINE | 4 | 2 |
| BUPIVACAINE | 4 | 1 |
| CEFTRIAXONE | 4 | 1 |
| IBUPROFEN | 4 | 1 |
| METRONIDAZOLE HYDROCHLORIDE | 4 | 1 |
| NEOMYCIN | 4 | 1 |
| FRAMYCETIN | 3 | 1 |
| POLYETHYLENE GLYCOL | 3 | 1 |
| CHEMBL3754093 | 0 | 1 |
| CHEMBL4299247 | 0 | 1 |
| 17 | 0 | 1 |
| AMOXICILLIN/CLAVULANIC ACID | 0 | 1 |
Related Atlas pages
- Cohort genes: CALCB, TAB2, LSM10, ARHGAP15, COLQ, NALF1, NID1, PDE7B
- Drugs: Mesalamine, Indocyanine Green Acid Form, Tigecycline, Bupivacaine, Ceftriaxone, Ibuprofen, Metronidazole, Neomycin, Framycetin, Polyethylene Glycol