Encephalocraniocutaneous lipomatosis
diseaseOn this page
Also known as ECCLencephalocraniocutaneous lipomatosis, somatic mosaicFishman syndromeHaberland syndrome
Summary
Encephalocraniocutaneous lipomatosis (MONDO:0013074) is a disease caused by FGFR1 (GenCC Definitive), with 2 cohort genes.
At a glance
- Prevalence: <1 / 1 000 000 (Worldwide) [Orphanet-validated]
- Causal gene: FGFR1 (GenCC Definitive)
- Cohort genes: 2
- ClinVar variants: 154
- Phenotypes (HPO): 55
Clinical features
Epidemiology
Prevalence records
2 prevalence record(s), Orphanet:
| Type | Class | Value | Geography | Validation |
|---|---|---|---|---|
| Cases/families | 77 | Worldwide | Validated | |
| Point prevalence | <1 / 1 000 000 | Worldwide | Validated |
Signs & symptoms
Clinical features (HPO)
55 HPO clinical features (Orphanet curated; top 50 by frequency):
| HPO ID | Term | Frequency |
|---|---|---|
| HP:0000488 | Retinopathy | Very frequent (80-99%) |
| HP:0000991 | Xanthomatosis | Very frequent (80-99%) |
| HP:0001012 | Multiple lipomas | Very frequent (80-99%) |
| HP:0001249 | Intellectual disability | Very frequent (80-99%) |
| HP:0001250 | Seizure | Very frequent (80-99%) |
| HP:0001263 | Global developmental delay | Very frequent (80-99%) |
| HP:0001482 | Subcutaneous nodule | Very frequent (80-99%) |
| HP:0001596 | Alopecia | Very frequent (80-99%) |
| HP:0009125 | Lipodystrophy | Very frequent (80-99%) |
| HP:0012759 | Neurodevelopmental abnormality | Very frequent (80-99%) |
| HP:0001276 | Hypertonia | Frequent (30-79%) |
| HP:0001331 | Absent septum pellucidum | Frequent (30-79%) |
| HP:0001704 | Tricuspid valve prolapse | Frequent (30-79%) |
| HP:0002059 | Cerebral atrophy | Frequent (30-79%) |
| HP:0002063 | Rigidity | Frequent (30-79%) |
| HP:0002092 | Pulmonary arterial hypertension | Frequent (30-79%) |
| HP:0002119 | Ventriculomegaly | Frequent (30-79%) |
| HP:0002120 | Cerebral cortical atrophy | Frequent (30-79%) |
| HP:0002167 | Abnormality of speech or vocalization | Frequent (30-79%) |
| HP:0002300 | Mutism | Frequent (30-79%) |
| HP:0002381 | Aphasia | Frequent (30-79%) |
| HP:0002514 | Cerebral calcification | Frequent (30-79%) |
| HP:0002797 | Osteolysis | Frequent (30-79%) |
| HP:0003552 | Muscle stiffness | Frequent (30-79%) |
| HP:0004493 | Craniofacial hyperostosis | Frequent (30-79%) |
| HP:0005306 | Capillary hemangioma | Frequent (30-79%) |
| HP:0007957 | Corneal opacity | Frequent (30-79%) |
| HP:0010529 | Echolalia | Frequent (30-79%) |
| HP:0010622 | Neoplasm of the skeletal system | Frequent (30-79%) |
| HP:0012062 | Bone cyst | Frequent (30-79%) |
| HP:0012157 | Subcortical cerebral atrophy | Frequent (30-79%) |
| HP:0100761 | Visceral angiomatosis | Frequent (30-79%) |
| HP:0000256 | Macrocephaly | Frequent (30-79%) |
| HP:0000271 | Abnormality of the face | Frequent (30-79%) |
| HP:0000492 | Abnormal eyelid morphology | Frequent (30-79%) |
| HP:0000499 | Abnormal eyelash morphology | Frequent (30-79%) |
| HP:0000612 | Iris coloboma | Frequent (30-79%) |
| HP:0000614 | Abnormal nasolacrimal system morphology | Frequent (30-79%) |
| HP:0000708 | Atypical behavior | Frequent (30-79%) |
| HP:0000929 | Abnormal skull morphology | Frequent (30-79%) |
| HP:0001052 | Nevus flammeus | Frequent (30-79%) |
| HP:0001257 | Spasticity | Frequent (30-79%) |
| HP:0001274 | Agenesis of corpus callosum | Frequent (30-79%) |
| HP:0000943 | Dysostosis multiplex | Occasional (5-29%) |
| HP:0001269 | Hemiparesis | Occasional (5-29%) |
| HP:0001650 | Aortic valve stenosis | Occasional (5-29%) |
| HP:0001679 | Abnormal aortic morphology | Occasional (5-29%) |
| HP:0001680 | Coarctation of aorta | Occasional (5-29%) |
| HP:0002301 | Hemiplegia | Occasional (5-29%) |
| HP:0002445 | Tetraplegia | Occasional (5-29%) |
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | encephalocraniocutaneous lipomatosis |
| Mondo ID | MONDO:0013074 |
| MeSH | C535736 |
| OMIM | 613001 |
| Orphanet | 2396 |
| ICD-11 | 1084215843 |
| NCIT | C4701 |
| SNOMED CT | 238905009 |
| UMLS | C0406612 |
| MedGen | 140807 |
| GARD | 0002108 |
| Is cancer (heuristic) | no |
Also known as: ECCL · encephalocraniocutaneous lipomatosis · encephalocraniocutaneous lipomatosis, somatic mosaic · Fishman syndrome · Haberland syndrome
Data availability: 154 ClinVar variants · 2 GenCC gene-disease records.
Disease family
Classification path: disease › human disease › disease by body system or component › musculoskeletal system disorder › musculoskeletal system benign neoplasm › benign connective and soft tissue neoplasm › benign lipomatous neoplasm › lipomatosis › encephalocraniocutaneous lipomatosis
Related subtypes (8): diffuse lipomatosis, mediastinal lipomatosis, pelvic lipomatosis, steroid lipomatosis, adiposis dolorosa, multiple symmetric lipomatosis, congenital infiltrating lipomatosis of the face, pancreatic lipomatosis duodenal stenosis
Genetics & variants
GWAS landscape
No GWAS associations recorded — common-variant (GWAS) studies don’t cover this disease (typical for Mendelian / rare diseases). See the curated gene cohort and Mendelian overlap below.
Variant details and genetic-evidence tiers
ClinVar germline variants
154 retrieved; paginated sample, class counts are floors:
77 uncertain significance, 30 conflicting classifications of pathogenicity, 19 likely benign, 10 benign/likely benign, 7 pathogenic, 6 pathogenic/likely pathogenic, 4 likely pathogenic, 1 benign
| ClinVar | Variant (HGVS) | Gene | Classification | Review |
|---|---|---|---|---|
| 16279 | NM_023110.3(FGFR1):c.755C>G (p.Pro252Arg) | FGFR1 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 224896 | NM_023110.3(FGFR1):c.1638C>A (p.Asn546Lys) | FGFR1 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 224897 | NM_023110.3(FGFR1):c.1966A>G (p.Lys656Glu) | FGFR1 | Pathogenic | criteria provided, single submitter |
| 235087 | NM_023110.3(FGFR1):c.1977+1G>A | FGFR1 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 2505415 | NM_023110.3(FGFR1):c.710G>A (p.Gly237Asp) | FGFR1 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 502125 | NM_023110.3(FGFR1):c.214C>T (p.Gln72Ter) | FGFR1 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 931981 | NM_023110.3(FGFR1):c.1671del (p.Leu557fs) | FGFR1 | Pathogenic | criteria provided, single submitter |
| 12580 | NM_004985.5(KRAS):c.38G>A (p.Gly13Asp) | KRAS | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 12582 | NM_004985.5(KRAS):c.35G>A (p.Gly12Asp) | KRAS | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 217822 | NM_004985.5(KRAS):c.57G>C (p.Leu19Phe) | KRAS | Pathogenic | criteria provided, single submitter |
| 375962 | NM_004985.5(KRAS):c.437C>T (p.Ala146Val) | KRAS | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 375963 | NM_033360.4(KRAS):c.436G>C (p.Ala146Pro) | KRAS | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 375965 | NM_033360.4(KRAS):c.351A>C (p.Lys117Asn) | KRAS | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 1338542 | NM_023110.3(FGFR1):c.809G>A (p.Gly270Asp) | FGFR1 | Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 3595591 | NM_023110.3(FGFR1):c.1854+2T>C | FGFR1 | Likely pathogenic | criteria provided, single submitter |
| 4796553 | NM_023110.3(FGFR1):c.2156T>C (p.Met719Thr) | FGFR1 | Likely pathogenic | criteria provided, single submitter |
| 654366 | NM_023110.3(FGFR1):c.448+1G>A | FGFR1 | Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 1156684 | NM_023110.3(FGFR1):c.789C>T (p.Ala263=) | FGFR1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 1186398 | NM_023110.3(FGFR1):c.266A>G (p.Gln89Arg) | FGFR1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 1197448 | NM_023110.3(FGFR1):c.448+1G>C | FGFR1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 1302903 | NM_023110.3(FGFR1):c.2428C>T (p.His810Tyr) | FGFR1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 1304409 | NM_023110.3(FGFR1):c.2426G>A (p.Arg809Gln) | FGFR1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 1352087 | NM_023110.3(FGFR1):c.169C>A (p.Leu57Met) | FGFR1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 1416171 | NM_023110.3(FGFR1):c.2267G>A (p.Arg756His) | FGFR1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 1431252 | NM_023110.3(FGFR1):c.1179G>A (p.Ser393=) | FGFR1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 1496164 | NM_023110.3(FGFR1):c.346G>A (p.Val116Ile) | FGFR1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 1509706 | NM_023110.3(FGFR1):c.1186G>A (p.Val396Ile) | FGFR1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 16289 | NM_023110.3(FGFR1):c.899T>C (p.Ile300Thr) | FGFR1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 16299 | NM_023110.3(FGFR1):c.1097C>T (p.Pro366Leu) | FGFR1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 180152 | NM_023110.3(FGFR1):c.821A>G (p.Glu274Gly) | FGFR1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 36 · Orphanet: 28 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
GenCC gene–disease validity (cohort genes)
the Disease column is the GenCC-asserted condition — a cohort gene’s strongest validity may be for a related predisposition syndrome.
| Gene | Classification | Inheritance | Disease | Records |
|---|---|---|---|---|
| FGFR1 | Definitive | Autosomal dominant | encephalocraniocutaneous lipomatosis | 36 |
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|---|---|
| FGFR1 | Orphanet:168953 | Myeloid/lymphoid neoplasm associated with FGFR1 rearrangement |
| FGFR1 | Orphanet:2117 | Hartsfield syndrome |
| FGFR1 | Orphanet:220386 | Semilobar holoprosencephaly |
| FGFR1 | Orphanet:2396 | Encephalocraniocutaneous lipomatosis |
| FGFR1 | Orphanet:251576 | Gliosarcoma |
| FGFR1 | Orphanet:251579 | Giant cell glioblastoma |
| FGFR1 | Orphanet:251615 | Pilomyxoid astrocytoma |
| FGFR1 | Orphanet:2645 | Osteoglosphonic dysplasia |
| FGFR1 | Orphanet:280200 | Microform holoprosencephaly |
| FGFR1 | Orphanet:314950 | Primary hypereosinophilic syndrome |
| FGFR1 | Orphanet:3157 | Septo-optic dysplasia spectrum |
| FGFR1 | Orphanet:3366 | Non-syndromic metopic craniosynostosis |
| FGFR1 | Orphanet:432 | Normosmic congenital hypogonadotropic hypogonadism |
| FGFR1 | Orphanet:478 | Kallmann syndrome |
| FGFR1 | Orphanet:93258 | Pfeiffer syndrome type 1 |
| FGFR1 | Orphanet:93924 | Lobar holoprosencephaly |
| FGFR1 | Orphanet:99798 | Oligodontia |
| KRAS | Orphanet:1333 | Familial pancreatic carcinoma |
| KRAS | Orphanet:1340 | Cardiofaciocutaneous syndrome |
| KRAS | Orphanet:144 | Lynch syndrome |
| KRAS | Orphanet:146 | Differentiated thyroid carcinoma |
| KRAS | Orphanet:2396 | Encephalocraniocutaneous lipomatosis |
| KRAS | Orphanet:251615 | Pilomyxoid astrocytoma |
| KRAS | Orphanet:2612 | Linear nevus sebaceus syndrome |
| KRAS | Orphanet:268114 | RAS-associated autoimmune leukoproliferative disease |
| KRAS | Orphanet:3339 | Oculoectodermal syndrome |
| KRAS | Orphanet:648 | Noonan syndrome |
| KRAS | Orphanet:86834 | Juvenile myelomonocytic leukemia |
Cohort genes → proteins
2 cohort genes, 2 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|---|
| multi_evidence | 2 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|---|---|---|---|---|
| FGFR1 | HGNC:3688 | ENSG00000077782 | P11362 | Fibroblast growth factor receptor 1 | gencc,clinvar |
| KRAS | HGNC:6407 | ENSG00000133703 | P01116 | GTPase KRas | clinvar |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|---|---|
| FGFR1 | Fibroblast growth factor receptor 1 | Tyrosine-protein kinase that acts as a cell-surface receptor for fibroblast growth factors and plays an essential role in the regulation of embryonic development, cell proliferation, differentiation and migration. |
| KRAS | GTPase KRas | Ras proteins bind GDP/GTP and possess intrinsic GTPase activity. |
Protein-family classification
Druggable: 2 · Difficult: 0 · Unknown: 0 · Druggable fraction: 1.0
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|---|---|---|
| Kinase | 1 | 13.9× | 0.142 |
| Enzyme (other) | 1 | 6.0× | 0.160 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|---|---|---|---|
| FGFR1 | Kinase | yes | 2.7.10.1 | Prot_kinase_dom, Ser-Thr/Tyr_kinase_cat_dom, Ig_sub2 |
| KRAS | Enzyme (other) | yes | 3.6.5.2 | Small_GTPase, Small_GTP-bd, Small_GTPase_Ras-type |
Expression context
Cohort genes with no expression data: 0.
2 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 0 |
| broad (>20) | 2 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|---|
| buccal mucosa cell | 1 |
| calcaneal tendon | 1 |
| stromal cell of endometrium | 1 |
| nipple | 1 |
| pylorus | 1 |
| trigeminal ganglion | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|---|---|---|---|
| FGFR1 | 292 | ubiquitous | marker | buccal mucosa cell, stromal cell of endometrium, calcaneal tendon |
| KRAS | 298 | ubiquitous | marker | trigeminal ganglion, pylorus, nipple |
Protein interactions among cohort
Intra-cohort edges: 0.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|---|
| KRAS | 14,509 |
| FGFR1 | 5,693 |
Structural data
PDB: 2 · AlphaFold-only: 0 · No structure: 0
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|---|---|
| KRAS | P01116 | 511 |
| FGFR1 | P11362 | 83 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 88. Enrichment computed across 2 evidence-associated genes (2 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 2 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| SHC-mediated cascade:FGFR1 | 2 | 496.5× | 2e-04 | FGFR1, KRAS |
| FRS-mediated FGFR1 signaling | 2 | 456.8× | 2e-04 | FGFR1, KRAS |
| Signaling by FGFR1 in disease | 2 | 292.8× | 3e-04 | FGFR1, KRAS |
| NCAM signaling for neurite out-growth | 2 | 271.9× | 3e-04 | FGFR1, KRAS |
| RAF/MAP kinase cascade | 2 | 61.1× | 0.005 | FGFR1, KRAS |
| Signaling by FGFR1 amplification mutants | 1 | 2855.0× | 0.005 | FGFR1 |
| Signaling by RAS GAP mutants | 1 | 1903.3× | 0.006 | KRAS |
| Signaling by RAS GTPase mutants | 1 | 1903.3× | 0.006 | KRAS |
| FGFR1c and Klotho ligand binding and activation | 1 | 1427.5× | 0.006 | FGFR1 |
| Signaling by plasma membrane FGFR1 fusions | 1 | 1427.5× | 0.006 | FGFR1 |
| Activation of RAS in B cells | 1 | 1142.0× | 0.006 | KRAS |
| RAS signaling downstream of NF1 loss-of-function variants | 1 | 815.7× | 0.006 | KRAS |
| Estrogen-stimulated signaling through PRKCZ | 1 | 815.7× | 0.006 | KRAS |
| SOS-mediated signalling | 1 | 713.8× | 0.006 | KRAS |
| Epithelial-Mesenchymal Transition (EMT) during gastrulation | 1 | 713.8× | 0.006 | FGFR1 |
| FGFR1b ligand binding and activation | 1 | 634.4× | 0.006 | FGFR1 |
| Activated NTRK3 signals through RAS | 1 | 634.4× | 0.006 | KRAS |
| EGFR Transactivation by Gastrin | 1 | 571.0× | 0.006 | KRAS |
| SHC-related events triggered by IGF1R | 1 | 571.0× | 0.006 | KRAS |
| RUNX3 regulates p14-ARF | 1 | 571.0× | 0.006 | KRAS |
| Activated NTRK2 signals through RAS | 1 | 571.0× | 0.006 | KRAS |
| MET activates RAS signaling | 1 | 519.1× | 0.006 | KRAS |
| Signaling by activated point mutants of FGFR1 | 1 | 475.8× | 0.006 | FGFR1 |
| Signaling by FGFR4 in disease | 1 | 475.8× | 0.006 | KRAS |
| Activated NTRK2 signals through FRS2 and FRS3 | 1 | 475.8× | 0.006 | KRAS |
| Constitutive Signaling by Overexpressed ERBB2 | 1 | 475.8× | 0.006 | KRAS |
| p38MAPK events | 1 | 439.2× | 0.006 | KRAS |
| Signaling by PDGFRA transmembrane, juxtamembrane and kinase domain mutants | 1 | 439.2× | 0.006 | KRAS |
| Signaling by PDGFRA extracellular domain mutants | 1 | 439.2× | 0.006 | KRAS |
| PTK6 Regulates RHO GTPases, RAS GTPase and MAP kinases | 1 | 407.9× | 0.006 | KRAS |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 2 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| cardiac muscle cell proliferation | 2 | 581.1× | 3e-04 | FGFR1, KRAS |
| MAPK cascade | 2 | 153.2× | 0.002 | FGFR1, KRAS |
| response to mineralocorticoid | 1 | 8426.0× | 0.003 | KRAS |
| vitamin D3 metabolic process | 1 | 4213.0× | 0.003 | FGFR1 |
| positive regulation of mitotic cell cycle DNA replication | 1 | 4213.0× | 0.003 | FGFR1 |
| positive regulation of parathyroid hormone secretion | 1 | 4213.0× | 0.003 | FGFR1 |
| regulation of extrinsic apoptotic signaling pathway in absence of ligand | 1 | 4213.0× | 0.003 | FGFR1 |
| regulation of phosphate transport | 1 | 2808.7× | 0.003 | FGFR1 |
| forebrain astrocyte development | 1 | 2808.7× | 0.003 | KRAS |
| fibroblast growth factor receptor signaling pathway involved in orbitofrontal cortex development | 1 | 2808.7× | 0.003 | FGFR1 |
| regulation of lateral mesodermal cell fate specification | 1 | 2808.7× | 0.003 | FGFR1 |
| gene expression | 2 | 79.9× | 0.003 | FGFR1, KRAS |
| ventricular zone neuroblast division | 1 | 2106.5× | 0.003 | FGFR1 |
| response to isolation stress | 1 | 2106.5× | 0.003 | KRAS |
| negative regulation of fibroblast growth factor production | 1 | 2106.5× | 0.003 | FGFR1 |
| positive regulation of phospholipase activity | 1 | 1685.2× | 0.003 | FGFR1 |
| regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling | 1 | 1685.2× | 0.003 | FGFR1 |
| diphosphate metabolic process | 1 | 1685.2× | 0.003 | FGFR1 |
| response to gravity | 1 | 1404.3× | 0.003 | KRAS |
| chordate embryonic development | 1 | 1404.3× | 0.003 | FGFR1 |
| positive regulation of MAPKKK cascade by fibroblast growth factor receptor signaling pathway | 1 | 1404.3× | 0.003 | FGFR1 |
| cementum mineralization | 1 | 1203.7× | 0.004 | FGFR1 |
| auditory receptor cell development | 1 | 936.2× | 0.004 | FGFR1 |
| paraxial mesoderm development | 1 | 842.6× | 0.004 | FGFR1 |
| lung-associated mesenchyme development | 1 | 842.6× | 0.004 | FGFR1 |
| response to sodium phosphate | 1 | 842.6× | 0.004 | FGFR1 |
| outer ear morphogenesis | 1 | 766.0× | 0.004 | FGFR1 |
| type I pneumocyte differentiation | 1 | 766.0× | 0.004 | KRAS |
| myoblast proliferation | 1 | 702.2× | 0.005 | KRAS |
| branching involved in salivary gland morphogenesis | 1 | 702.2× | 0.005 | FGFR1 |
Therapeutics
Drug target analysis
Approved (phase 4): 2 · Phase ≥3: 2 · Phased (≥1): 2 · Undrugged: 0
Druggability breadth: 2 of 2 evidence-associated genes (100%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Genes with an approved drug
The molecule shown is one approved compound that hits the gene — not necessarily a drug of choice or one indicated for this disease.
| Symbol | Example approved molecule |
|---|---|
| FGFR1 | PONATINIB |
| KRAS | VEMURAFENIB |
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|---|---|
| FGFR1 | 93 | 4 |
| KRAS | 11 | 4 |
Drugs targeting cohort genes (top 30)
| Molecule | Max phase | Targets in cohort |
|---|---|---|
| PONATINIB | 4 | FGFR1 |
| PEMIGATINIB | 4 | FGFR1 |
| NINTEDANIB | 4 | FGFR1 |
| FEDRATINIB | 4 | FGFR1 |
| TIVOZANIB | 4 | FGFR1 |
| LENVATINIB | 4 | FGFR1 |
| AXITINIB | 4 | FGFR1 |
| SORAFENIB | 4 | FGFR1 |
| NICLOSAMIDE | 4 | FGFR1 |
| INFIGRATINIB PHOSPHATE | 4 | FGFR1 |
| INFIGRATINIB | 4 | FGFR1 |
| REGORAFENIB | 4 | FGFR1 |
| ENTRECTINIB | 4 | FGFR1 |
| CABOZANTINIB | 4 | FGFR1 |
| CAPIVASERTIB | 4 | FGFR1 |
| VANDETANIB | 4 | FGFR1 |
| NINTEDANIB ESYLATE | 4 | FGFR1 |
| BRIGATINIB | 4 | FGFR1 |
| ERDAFITINIB | 4 | FGFR1 |
| UPADACITINIB | 4 | FGFR1 |
| FUTIBATINIB | 4 | FGFR1 |
| PAZOPANIB | 4 | FGFR1 |
| SUNITINIB | 4 | FGFR1 |
| DASATINIB | 4 | FGFR1 |
| MIDOSTAURIN | 4 | FGFR1 |
| VEMURAFENIB | 4 | KRAS |
| DABRAFENIB | 4 | KRAS |
| LONAFARNIB | 4 | KRAS |
| SOTORASIB | 4 | KRAS |
| ADAGRASIB | 4 | KRAS |
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 2.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|---|---|
| FGFR1 | 1,465 | Binding:1428, Functional:24, ADMET:13 |
| KRAS | 861 | Binding:829, Functional:32 |
Cohort enzymes (BRENDA EC)
| Symbol | EC numbers | Names |
|---|---|---|
| FGFR1 | 2.7.10.1 | receptor protein-tyrosine kinase |
| KRAS | 3.6.5.2 | small monomeric GTPase |
Cohort genes with high screening signal
≥100 ChEMBL assays — a studied-ness signal; see Therapeutics for approved-drug status.
| Symbol | ChEMBL assays |
|---|---|
| FGFR1 | 1,465 |
| KRAS | 861 |
Pharmacogenomics
Cohort genes with a PharmGKB record: 2; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Chemical tractability of cohort targets
30 approved/phased compounds have measured bioactivity against a cohort gene (and aren’t yet in disease-level trials). This is a research / tractability signal, NOT a therapeutic recommendation — a bioactivity row often reflects off-target or screening binding (e.g. promiscuous kinase inhibitors against a cohort kinase), implying no disease mechanism.
| Compound | Max phase | Cohort target (bioactivity) |
|---|---|---|
| PONATINIB | 4 | FGFR1 |
| PEMIGATINIB | 4 | FGFR1 |
| NINTEDANIB | 4 | FGFR1 |
| FEDRATINIB | 4 | FGFR1 |
| TIVOZANIB | 4 | FGFR1 |
| LENVATINIB | 4 | FGFR1 |
| AXITINIB | 4 | FGFR1 |
| SORAFENIB | 4 | FGFR1 |
| NICLOSAMIDE | 4 | FGFR1 |
| INFIGRATINIB PHOSPHATE | 4 | FGFR1 |
| INFIGRATINIB | 4 | FGFR1 |
| REGORAFENIB | 4 | FGFR1 |
| ENTRECTINIB | 4 | FGFR1 |
| CABOZANTINIB | 4 | FGFR1 |
| CAPIVASERTIB | 4 | FGFR1 |
| VANDETANIB | 4 | FGFR1 |
| NINTEDANIB ESYLATE | 4 | FGFR1 |
| BRIGATINIB | 4 | FGFR1 |
| ERDAFITINIB | 4 | FGFR1 |
| UPADACITINIB | 4 | FGFR1 |
| FUTIBATINIB | 4 | FGFR1 |
| PAZOPANIB | 4 | FGFR1 |
| SUNITINIB | 4 | FGFR1 |
| DASATINIB | 4 | FGFR1 |
| MIDOSTAURIN | 4 | FGFR1 |
| VEMURAFENIB | 4 | KRAS |
| DABRAFENIB | 4 | KRAS |
| LONAFARNIB | 4 | KRAS |
| SOTORASIB | 4 | KRAS |
| ADAGRASIB | 4 | KRAS |
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|---|---|---|
| A | Approved (phase 4 drug) | 2 | FGFR1, KRAS |
| B | Phased (≥1) drug, not yet approved | 0 | |
| C | Druggable family + PDB, no drug | 0 | |
| D | Druggable family + AlphaFold only, no drug | 0 | |
| E | Difficult family or no structure, no drug | 0 |
Undrugged target profiles
0 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
Clinical trials & evidence
Clinical trials
Clinical trials: 0.