Exudative vitreoretinopathy
diseaseOn this page
Also known as Criswick-Schepens syndromeexudative vitreoretinopathy, familialfamilial exudative vitreoretinopathyFEVR
Summary
Exudative vitreoretinopathy (MONDO:0019516) is a disease (an umbrella term covering 9 Mondo subtypes) caused by CTNNB1 (GenCC Definitive), with 7 cohort genes and 3 clinical trials. Top therapeutic interventions include bromfenac sodium.
At a glance
- Prevalence: Unknown (Worldwide)
- Causal gene: CTNNB1 (GenCC Definitive)
- Umbrella term: 9 Mondo subtypes
- Cohort genes: 7
- ClinVar variants: 17
- Phenotypes (HPO): 27
- Clinical trials: 3
Clinical features
Signs & symptoms
Clinical features (HPO)
27 HPO clinical features (Orphanet curated; top 27 by frequency):
| HPO ID | Term | Frequency |
|---|---|---|
| HP:0007773 | Vitreoretinopathy | Obligate (100%) |
| HP:0007685 | Peripheral retinal avascularization | Very frequent (80-99%) |
| HP:0001493 | Falciform retinal fold | Frequent (30-79%) |
| HP:0007663 | Reduced visual acuity | Frequent (30-79%) |
| HP:0007917 | Tractional retinal detachment | Frequent (30-79%) |
| HP:0012795 | Abnormality of the optic disc | Frequent (30-79%) |
| HP:0030666 | Retinal neovascularization | Frequent (30-79%) |
| HP:0031526 | Subretinal fluid | Frequent (30-79%) |
| HP:0000252 | Microcephaly | Occasional (5-29%) |
| HP:0000365 | Hearing impairment | Occasional (5-29%) |
| HP:0000518 | Cataract | Occasional (5-29%) |
| HP:0000533 | Chorioretinal atrophy | Occasional (5-29%) |
| HP:0000568 | Microphthalmia | Occasional (5-29%) |
| HP:0000618 | Blindness | Occasional (5-29%) |
| HP:0001004 | Lymphedema | Occasional (5-29%) |
| HP:0001141 | Severely reduced visual acuity | Occasional (5-29%) |
| HP:0001256 | Intellectual disability, mild | Occasional (5-29%) |
| HP:0001270 | Motor delay | Occasional (5-29%) |
| HP:0004349 | Reduced bone mineral density | Occasional (5-29%) |
| HP:0007902 | Vitreous hemorrhage | Occasional (5-29%) |
| HP:0011342 | Mild global developmental delay | Occasional (5-29%) |
| HP:0012230 | Rhegmatogenous retinal detachment | Occasional (5-29%) |
| HP:0030496 | Macular exudate | Occasional (5-29%) |
| HP:0030503 | Macular telangiectasia | Occasional (5-29%) |
| HP:0040049 | Macular edema | Occasional (5-29%) |
| HP:0100014 | Epiretinal membrane | Occasional (5-29%) |
| HP:0100832 | Vitreous floaters | Occasional (5-29%) |
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | exudative vitreoretinopathy |
| Mondo ID | MONDO:0019516 |
| MeSH | C580083 |
| OMIM | 133780 |
| Orphanet | 891 |
| DOID | DOID:0050535 |
| SNOMED CT | 232063007 |
| UMLS | C0339539 |
| MedGen | 573220 |
| GARD | 0001613 |
| Is cancer (heuristic) | no |
Also known as: Criswick-Schepens syndrome · exudative vitreoretinopathy, familial · familial exudative vitreoretinopathy · FEVR
Data availability: 17 ClinVar variants · 9 GenCC gene-disease records · 1 cell line.
Disease family
An umbrella term covering 9 Mondo subtypes.
Classification path: disease › human disease › disease by body system or component › nervous system disorder › retinal disorder › retinal vascular disorder › exudative vitreoretinopathy
Related subtypes (11): retinal microaneurysm, retinal vascular occlusion, retinal hemangioblastoma, retinal telangiectasia, diabetic retinopathy, retinal vasculitis, retinal vasculopathy with cerebral leukoencephalopathy and systemic manifestations, familial retinal arterial macroaneurysm, vasoproliferative tumor of retina, arteriosclerotic retinopathy, perifoveal exudative vascular anomalous complex
Subtypes (9): exudative vitreoretinopathy 2, X-linked, exudative vitreoretinopathy 3, exudative vitreoretinopathy 6, exudative vitreoretinopathy 7, LRP5-related exudative vitreoretinopathy, TSPAN12-related exudative vitreoretinopathy, exudative vitreoretinopathy 8, dyneinopathy, FZD4-related exudative vitreoretinopathy
Genetics & variants
GWAS landscape
No GWAS associations recorded — common-variant (GWAS) studies don’t cover this disease (typical for Mendelian / rare diseases). See the curated gene cohort and Mendelian overlap below.
Variant details and genetic-evidence tiers
ClinVar germline variants
17 retrieved; paginated sample, class counts are floors:
6 uncertain significance, 5 pathogenic, 3 likely pathogenic, 2 pathogenic/likely pathogenic, 1 conflicting classifications of pathogenicity
| ClinVar | Variant (HGVS) | Gene | Classification | Review |
|---|---|---|---|---|
| 224624 | NM_012193.4(FZD4):c.313A>G (p.Met105Val) | FZD4 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 224625 | NM_012193.4(FZD4):c.1282_1285del (p.Asp428fs) | FZD4 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 441133 | NM_012193.4(FZD4):c.40_49del (p.Pro14fs) | FZD4 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 2429188 | NC_000011.9:g.(?68080076)(68216744_?)del | LRP5 | Pathogenic | criteria provided, single submitter |
| 6287 | NM_002335.4(LRP5):c.4488+2T>G | LRP5 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 236067 | NM_012338.4(TSPAN12):c.542G>T (p.Cys181Phe) | TSPAN12 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 812466 | NM_024741.3(ZNF408):c.1697T>A (p.Leu566His) | ZNF408 | Pathogenic | no assertion criteria provided |
| 812323 | NM_012193.4(FZD4):c.349T>C (p.Cys117Arg) | FZD4 | Likely pathogenic | no assertion criteria provided |
| 3721066 | NM_002335.4(LRP5):c.1042C>T (p.Arg348Trp) | LRP5 | Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 224621 | NM_018191.4(RCBTB1):c.1172+1G>A | RCBTB1 | Likely pathogenic | criteria provided, single submitter |
| 1722379 | NM_002335.4(LRP5):c.3763+2T>C | LRP5 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 1386515 | NM_012193.4(FZD4):c.50T>C (p.Val17Ala) | FZD4 | Uncertain significance | criteria provided, single submitter |
| 437991 | NM_002335.4(LRP5):c.1265C>T (p.Ala422Val) | LRP5 | Uncertain significance | criteria provided, single submitter |
| 437992 | NM_002335.4(LRP5):c.3242T>G (p.Leu1081Arg) | LRP5 | Uncertain significance | criteria provided, single submitter |
| 224623 | NM_000266.4(NDP):c.-77A>G | NDP | Uncertain significance | no assertion criteria provided |
| 437962 | NM_012338.4(TSPAN12):c.225_227del (p.Ile76del) | TSPAN12 | Uncertain significance | criteria provided, single submitter |
| 812465 | NM_024741.3(ZNF408):c.1174T>C (p.Ser392Pro) | ZNF408 | Uncertain significance | criteria provided, single submitter |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 74 · Orphanet: 33 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
GenCC gene–disease validity (cohort genes)
the Disease column is the GenCC-asserted condition — a cohort gene’s strongest validity may be for a related predisposition syndrome.
| Gene | Classification | Inheritance | Disease | Records |
|---|---|---|---|---|
| CTNNB1 | Definitive | Autosomal dominant | exudative vitreoretinopathy | 9 |
| FZD4 | Definitive | Semidominant | exudative vitreoretinopathy 1 | 7 |
| LRP5 | Definitive | Semidominant | exudative vitreoretinopathy 4 | 26 |
| NDP | Definitive | X-linked | exudative vitreoretinopathy 2, X-linked | 9 |
| TSPAN12 | Definitive | Autosomal dominant | exudative vitreoretinopathy 5 | 5 |
| ZNF408 | Strong | Autosomal dominant | exudative vitreoretinopathy 6 | 10 |
| RCBTB1 | Limited | Autosomal dominant | exudative vitreoretinopathy | 8 |
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|---|---|
| RCBTB1 | Orphanet:99002 | Reticular dystrophy of the retinal pigment epithelium |
| ZNF408 | Orphanet:791 | Retinitis pigmentosa |
| ZNF408 | Orphanet:891 | Familial exudative vitreoretinopathy |
| TSPAN12 | Orphanet:891 | Familial exudative vitreoretinopathy |
| FZD4 | Orphanet:891 | Familial exudative vitreoretinopathy |
| FZD4 | Orphanet:90050 | Retinopathy of prematurity |
| FZD4 | Orphanet:91495 | Persistent hyperplastic primary vitreous |
| LRP5 | Orphanet:178377 | Osteosclerosis-developmental delay-craniosynostosis syndrome |
| LRP5 | Orphanet:2783 | Autosomal dominant osteopetrosis type 1 |
| LRP5 | Orphanet:2788 | Osteoporosis-pseudoglioma syndrome |
| LRP5 | Orphanet:2790 | Endosteal hyperostosis, Worth type |
| LRP5 | Orphanet:2924 | Isolated polycystic liver disease |
| LRP5 | Orphanet:3416 | Hyperostosis corticalis generalisata |
| LRP5 | Orphanet:498481 | LRP5-related primary osteoporosis |
| LRP5 | Orphanet:891 | Familial exudative vitreoretinopathy |
| LRP5 | Orphanet:90050 | Retinopathy of prematurity |
| NDP | Orphanet:190 | Coats disease |
| NDP | Orphanet:649 | Norrie disease |
| NDP | Orphanet:891 | Familial exudative vitreoretinopathy |
| NDP | Orphanet:90050 | Retinopathy of prematurity |
| NDP | Orphanet:91495 | Persistent hyperplastic primary vitreous |
| CTNNB1 | Orphanet:1501 | Adrenocortical carcinoma |
| CTNNB1 | Orphanet:210159 | Adult hepatocellular carcinoma |
| CTNNB1 | Orphanet:2780 | Osteopathia striata-cranial sclerosis syndrome |
| CTNNB1 | Orphanet:33402 | Pediatric hepatocellular carcinoma |
| CTNNB1 | Orphanet:404473 | Intellectual disability-eye abnormalities-microcephaly-peripheral spasticity syndrome |
| CTNNB1 | Orphanet:54595 | Craniopharyngioma |
| CTNNB1 | Orphanet:569248 | Microcystic stromal tumor |
| CTNNB1 | Orphanet:689430 | Adenoid ameloblastoma |
| CTNNB1 | Orphanet:873 | Desmoid tumor |
| CTNNB1 | Orphanet:891 | Familial exudative vitreoretinopathy |
| CTNNB1 | Orphanet:91414 | Pilomatrixoma |
| CTNNB1 | Orphanet:952 | Acrofacial dysostosis, Weyers type |
Cohort genes → proteins
7 cohort genes, 7 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|---|
| multi_evidence | 7 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|---|---|---|---|---|
| RCBTB1 | HGNC:18243 | ENSG00000136144 | Q8NDN9 | RCC1 and BTB domain-containing protein 1 | gencc,clinvar |
| ZNF408 | HGNC:20041 | ENSG00000175213 | Q9H9D4 | Zinc finger protein 408 | gencc,clinvar |
| TSPAN12 | HGNC:21641 | ENSG00000106025 | O95859 | Tetraspanin-12 | gencc,clinvar |
| FZD4 | HGNC:4042 | ENSG00000174804 | Q9ULV1 | Frizzled-4 | gencc,clinvar |
| LRP5 | HGNC:6697 | ENSG00000162337 | O75197 | Low-density lipoprotein receptor-related protein 5 | gencc,clinvar |
| NDP | HGNC:7678 | ENSG00000124479 | Q00604 | Norrin | gencc,clinvar |
| CTNNB1 | HGNC:2514 | ENSG00000168036 | P35222 | Catenin beta-1 | gencc |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|---|---|
| RCBTB1 | RCC1 and BTB domain-containing protein 1 | May be involved in cell cycle regulation by chromatin remodeling. |
| ZNF408 | Zinc finger protein 408 | May be involved in transcriptional regulation. |
| TSPAN12 | Tetraspanin-12 | Regulator of cell surface receptor signal transduction. |
| FZD4 | Frizzled-4 | Receptor for Wnt proteins. |
| LRP5 | Low-density lipoprotein receptor-related protein 5 | Acts as a coreceptor with members of the frizzled family of seven-transmembrane spanning receptors to transduce signal by Wnt proteins. |
| NDP | Norrin | Activates the canonical Wnt signaling pathway through FZD4 and LRP5 coreceptor. |
| CTNNB1 | Catenin beta-1 | Key downstream component of the canonical Wnt signaling pathway. |
Protein-family classification
Druggable: 1 · Difficult: 1 · Unknown: 5 · Druggable fraction: 0.14
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|---|---|---|
| GPCR | 1 | 3.4× | 0.499 |
| Other/Unknown | 5 | 1.3× | 0.499 |
| Transcription factor | 1 | 1.2× | 0.595 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|---|---|---|---|
| RCBTB1 | Other/Unknown | no | BTB/POZ_dom, Reg_chr_condens, RCC1/BLIP-II | |
| ZNF408 | Transcription factor | no | SET_dom, Znf_C2H2_type, Znf_C2H2_sf | |
| TSPAN12 | Other/Unknown | no | Tetraspanin_animals, Tetraspanin_EC2_sf, Tetraspanin/Peripherin | |
| FZD4 | GPCR | yes | Frizzled/Smoothened_7TM, Frizzled/SFRP, GPCR_2-like_7TM | |
| LRP5 | Other/Unknown | no | LDLR_classB_rpt, EGF, LDrepeatLR_classA_rpt | |
| NDP | Other/Unknown | no | Norrie_dis, Cys_knot_C, Glyco_hormone_CN | |
| CTNNB1 | Other/Unknown | no | Armadillo, ARM-like, Beta-catenin |
Expression context
Cohort genes with no expression data: 0.
5 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 0 |
| broad (>20) | 7 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|---|
| decidua | 2 |
| mucosa of paranasal sinus | 1 |
| pigmented layer of retina | 1 |
| cervix squamous epithelium | 1 |
| endothelial cell | 1 |
| tendon of biceps brachii | 1 |
| nephron tubule | 1 |
| oocyte | 1 |
| secondary oocyte | 1 |
| adipose tissue | 1 |
| right lung | 1 |
| subcutaneous adipose tissue | 1 |
| ascending aorta | 1 |
| mucosa of transverse colon | 1 |
| right lobe of liver | 1 |
| caudate nucleus | 1 |
| cranial nerve II | 1 |
| adrenal tissue | 1 |
| periodontal ligament | 1 |
| ventricular zone | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|---|---|---|---|
| RCBTB1 | 280 | ubiquitous | marker | mucosa of paranasal sinus, pigmented layer of retina, decidua |
| ZNF408 | 224 | ubiquitous | yes | endothelial cell, tendon of biceps brachii, cervix squamous epithelium |
| TSPAN12 | 267 | ubiquitous | marker | oocyte, nephron tubule, secondary oocyte |
| FZD4 | 243 | ubiquitous | marker | adipose tissue, subcutaneous adipose tissue, right lung |
| LRP5 | 224 | ubiquitous | marker | right lobe of liver, mucosa of transverse colon, ascending aorta |
| NDP | 197 | broad | yes | cranial nerve II, decidua, caudate nucleus |
| CTNNB1 | 295 | ubiquitous | marker | adrenal tissue, ventricular zone, periodontal ligament |
Protein interactions among cohort
Intra-cohort edges: 13.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|---|
| CTNNB1 | 15,668 |
| LRP5 | 2,619 |
| FZD4 | 1,869 |
| ZNF408 | 1,700 |
| NDP | 1,461 |
| RCBTB1 | 1,081 |
| TSPAN12 | 686 |
Intra-cohort edges
| A | B | Sources |
|---|---|---|
| CTNNB1 | NDP | string_interaction |
| FZD4 | LRP5 | string_interaction |
| FZD4 | NDP | biogrid_interaction, intact, string_interaction |
| FZD4 | TSPAN12 | string_interaction |
| FZD4 | ZNF408 | string_interaction |
| LRP5 | NDP | intact, string_interaction |
| LRP5 | TSPAN12 | string_interaction |
| LRP5 | ZNF408 | string_interaction |
| NDP | TSPAN12 | intact, string_interaction |
| NDP | ZNF408 | string_interaction |
| RCBTB1 | TSPAN12 | string_interaction |
| RCBTB1 | ZNF408 | string_interaction |
| TSPAN12 | ZNF408 | string_interaction |
Structural data
PDB: 4 · AlphaFold-only: 3 · No structure: 0
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|---|---|
| CTNNB1 | P35222 | 50 |
| NDP | Q00604 | 12 |
| FZD4 | Q9ULV1 | 11 |
| TSPAN12 | O95859 | 1 |
AlphaFold-only cohort genes (top 30 by pLDDT)
| Symbol | UniProt | pLDDT |
|---|---|---|
| RCBTB1 | Q8NDN9 | 92.98 |
| LRP5 | O75197 | 78.65 |
| ZNF408 | Q9H9D4 | 56.25 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 60. Enrichment computed across 7 evidence-associated genes (3 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 3 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| Signaling by RNF43 mutants | 2 | 845.9× | 1e-04 | FZD4, LRP5 |
| Regulation of FZD by ubiquitination | 2 | 346.1× | 3e-04 | FZD4, LRP5 |
| Disassembly of the destruction complex and recruitment of AXIN to the membrane | 2 | 237.9× | 5e-04 | LRP5, CTNNB1 |
| Ca2+ pathway | 2 | 119.0× | 0.001 | FZD4, CTNNB1 |
| TCF dependent signaling in response to WNT | 2 | 78.5× | 0.003 | LRP5, CTNNB1 |
| LRR FLII-interacting protein 1 (LRRFIP1) activates type I IFN production | 1 | 761.3× | 0.010 | CTNNB1 |
| Signaling by LRP5 mutants | 1 | 543.8× | 0.010 | LRP5 |
| CDH11 homotypic and heterotypic interactions | 1 | 543.8× | 0.010 | CTNNB1 |
| Regulation of CDH19 Expression and Function | 1 | 475.8× | 0.010 | CTNNB1 |
| InlA-mediated entry of Listeria monocytogenes into host cells | 1 | 423.0× | 0.010 | CTNNB1 |
| Binding of TCF/LEF:CTNNB1 to target gene promoters | 1 | 380.7× | 0.010 | CTNNB1 |
| RUNX3 regulates WNT signaling | 1 | 380.7× | 0.010 | CTNNB1 |
| Apoptotic cleavage of cell adhesion proteins | 1 | 346.1× | 0.010 | CTNNB1 |
| Regulation of CDH11 function | 1 | 346.1× | 0.010 | CTNNB1 |
| Regulation of CDH1 Function | 1 | 317.2× | 0.010 | CTNNB1 |
| Formation of axial mesoderm | 1 | 271.9× | 0.010 | CTNNB1 |
| WNT5A-dependent internalization of FZD4 | 1 | 253.8× | 0.010 | FZD4 |
| Signaling by GSK3beta mutants | 1 | 253.8× | 0.010 | CTNNB1 |
| CTNNB1 S33 mutants aren’t phosphorylated | 1 | 253.8× | 0.010 | CTNNB1 |
| CTNNB1 S37 mutants aren’t phosphorylated | 1 | 253.8× | 0.010 | CTNNB1 |
| CTNNB1 S45 mutants aren’t phosphorylated | 1 | 253.8× | 0.010 | CTNNB1 |
| CTNNB1 T41 mutants aren’t phosphorylated | 1 | 253.8× | 0.010 | CTNNB1 |
| Negative regulation of TCF-dependent signaling by WNT ligand antagonists | 1 | 237.9× | 0.010 | LRP5 |
| Formation of definitive endoderm | 1 | 237.9× | 0.010 | CTNNB1 |
| Beta-catenin phosphorylation cascade | 1 | 223.9× | 0.010 | CTNNB1 |
| Germ layer formation at gastrulation | 1 | 223.9× | 0.010 | CTNNB1 |
| Formation of the nephric duct | 1 | 211.5× | 0.010 | CTNNB1 |
| Specification of the neural plate border | 1 | 211.5× | 0.010 | CTNNB1 |
| Signaling by WNT in cancer | 1 | 200.3× | 0.010 | LRP5 |
| Regulation of MITF-M-dependent genes involved in cell cycle and proliferation | 1 | 190.3× | 0.010 | CTNNB1 |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 7 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| Norrin signaling pathway | 4 | 1925.9× | 1e-11 | TSPAN12, FZD4, LRP5, NDP |
| establishment of blood-brain barrier | 4 | 802.5× | 7e-10 | FZD4, LRP5, NDP, CTNNB1 |
| extracellular matrix-cell signaling | 3 | 1444.5× | 4e-08 | FZD4, LRP5, NDP |
| establishment of blood-retinal barrier | 3 | 1203.7× | 6e-08 | LRP5, NDP, CTNNB1 |
| retinal blood vessel morphogenesis | 3 | 1031.8× | 8e-08 | FZD4, LRP5, NDP |
| canonical Wnt signaling pathway | 4 | 87.5× | 3e-06 | FZD4, LRP5, NDP, CTNNB1 |
| endothelial cell differentiation | 2 | 321.0× | 6e-04 | FZD4, NDP |
| gastrulation with mouth forming second | 2 | 267.5× | 7e-04 | LRP5, CTNNB1 |
| retina layer formation | 2 | 185.2× | 0.001 | TSPAN12, NDP |
| positive regulation of mesenchymal cell proliferation | 2 | 172.0× | 0.001 | LRP5, CTNNB1 |
| positive regulation of DNA-templated transcription | 4 | 16.0× | 0.001 | FZD4, LRP5, NDP, CTNNB1 |
| regulation of angiogenesis | 2 | 120.4× | 0.002 | TSPAN12, CTNNB1 |
| angiogenesis | 3 | 26.8× | 0.003 | TSPAN12, FZD4, NDP |
| embryonic digit morphogenesis | 2 | 86.0× | 0.004 | LRP5, CTNNB1 |
| glial cell fate determination | 1 | 2407.4× | 0.006 | CTNNB1 |
| canonical Wnt signaling pathway involved in mesenchymal stem cell differentiation | 1 | 2407.4× | 0.006 | CTNNB1 |
| cerebellum vasculature morphogenesis | 1 | 2407.4× | 0.006 | FZD4 |
| cranial ganglion development | 1 | 2407.4× | 0.006 | CTNNB1 |
| positive regulation of osteoblast differentiation | 2 | 64.2× | 0.006 | LRP5, CTNNB1 |
| neural plate development | 1 | 1203.7× | 0.006 | CTNNB1 |
| negative regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis | 1 | 1203.7× | 0.006 | CTNNB1 |
| regulation of centriole-centriole cohesion | 1 | 1203.7× | 0.006 | CTNNB1 |
| progesterone secretion | 1 | 1203.7× | 0.006 | FZD4 |
| negative regulation of mitotic cell cycle, embryonic | 1 | 1203.7× | 0.006 | CTNNB1 |
| regulation of timing of anagen | 1 | 1203.7× | 0.006 | CTNNB1 |
| positive regulation of branching involved in lung morphogenesis | 1 | 1203.7× | 0.006 | CTNNB1 |
| renal vesicle formation | 1 | 1203.7× | 0.006 | CTNNB1 |
| renal inner medulla development | 1 | 1203.7× | 0.006 | CTNNB1 |
| renal outer medulla development | 1 | 1203.7× | 0.006 | CTNNB1 |
| nephron tubule formation | 1 | 1203.7× | 0.006 | CTNNB1 |
Therapeutics
Drug target analysis
Approved (phase 4): 1 · Phase ≥3: 1 · Phased (≥1): 1 · Undrugged: 6
Druggability breadth: 3 of 7 evidence-associated genes (43%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Genes with an approved drug
The molecule shown is one approved compound that hits the gene — not necessarily a drug of choice or one indicated for this disease.
| Symbol | Example approved molecule |
|---|---|
| CTNNB1 | DITHIAZANINE IODIDE |
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|---|---|
| CTNNB1 | 4 | 4 |
| RCBTB1 | 0 | 0 |
| ZNF408 | 0 | 0 |
| TSPAN12 | 0 | 0 |
| FZD4 | 0 | 0 |
| LRP5 | 0 | 0 |
| NDP | 0 | 0 |
Drugs targeting cohort genes (top 30)
| Molecule | Max phase | Targets in cohort |
|---|---|---|
| DITHIAZANINE IODIDE | 4 | CTNNB1 |
| QUERCETIN | 3 | CTNNB1 |
| SALINOMYCIN | 2 | CTNNB1 |
| DALOSIRVAT | 2 | CTNNB1 |
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 0.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|---|---|
| CTNNB1 | 361 | Binding:358, Functional:3 |
| FZD4 | 7 | Functional:6, Binding:1 |
| LRP5 | 1 | Binding:1 |
Cohort genes with high screening signal
≥100 ChEMBL assays — a studied-ness signal; see Therapeutics for approved-drug status.
| Symbol | ChEMBL assays |
|---|---|
| CTNNB1 | 361 |
Pharmacogenomics
Cohort genes with a PharmGKB record: 7; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Chemical tractability of cohort targets
4 approved/phased compounds have measured bioactivity against a cohort gene (and aren’t yet in disease-level trials). This is a research / tractability signal, NOT a therapeutic recommendation — a bioactivity row often reflects off-target or screening binding (e.g. promiscuous kinase inhibitors against a cohort kinase), implying no disease mechanism.
| Compound | Max phase | Cohort target (bioactivity) |
|---|---|---|
| DITHIAZANINE IODIDE | 4 | CTNNB1 |
| QUERCETIN | 3 | CTNNB1 |
| SALINOMYCIN | 2 | CTNNB1 |
| DALOSIRVAT | 2 | CTNNB1 |
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|---|---|---|
| A | Approved (phase 4 drug) | 1 | CTNNB1 |
| B | Phased (≥1) drug, not yet approved | 0 | |
| C | Druggable family + PDB, no drug | 1 | FZD4 |
| D | Druggable family + AlphaFold only, no drug | 0 | |
| E | Difficult family or no structure, no drug | 5 | RCBTB1, ZNF408, TSPAN12, LRP5, NDP |
Undrugged target profiles
6 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
| Symbol | ChEMBL assays | Drugged partners (top 3) |
|---|---|---|
| RCBTB1 | 0 | — |
| ZNF408 | 0 | — |
| TSPAN12 | 0 | — |
| FZD4 | 7 | — |
| LRP5 | 1 | — |
| NDP | 0 | — |
Clinical trials & evidence
Clinical trials
Clinical trials: 3.
Phase distribution (across all retrieved trials)
| Phase | Trials |
|---|---|
| PHASE4 | 1 |
| PHASE2 | 1 |
| Not specified | 1 |
Top trials by phase / activity
| NCT | Phase | Status | Title |
|---|---|---|---|
| NCT06520410 | PHASE4 | RECRUITING | Safety and Efficacy of 18 mm Short Vitrectomy Probe for Pediatric Vitreoretinal Surgeries |
| NCT05107921 | PHASE2 | UNKNOWN | Bromfenac Sodium Hydrate Eye Drops in Familial Exudative Vitreoretinopathy |
| NCT00106756 | Not specified | COMPLETED | Clinical and Genetic Studies of Familial Exudative Vitreoretinopathy |
Drugs tested across these trials (top 30)
| Molecule | Max phase | Trials referencing |
|---|---|---|
| BROMFENAC SODIUM | 4 | 1 |