Hearing loss, autosomal dominant 34, with or without inflammation

disease
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Also known as autosomal dominant nonsyndromic deafness 34deafness, autosomal dominant 34, with or without inflammationDFNA34

Summary

Hearing loss, autosomal dominant 34, with or without inflammation (MONDO:0033261) is a disease with 1 cohort gene.

At a glance

  • Cohort genes: 1
  • ClinVar variants: 168

Clinical features

No curated clinical features (Orphanet) for this disease.

Identifiers

Disease identifiers

FieldValue
Canonical namehearing loss, autosomal dominant 34, with or without inflammation
Mondo IDMONDO:0033261
OMIM617772
DOIDDOID:0080270
UMLSC4521680
MedGen1626346
GARD0025790
Is cancer (heuristic)no

Also known as: autosomal dominant nonsyndromic deafness 34 · deafness, autosomal dominant 34, with or without inflammation · DFNA34

Data availability: 168 ClinVar variants.

Disease family

Classification path: disease › human disease › disease by etiologic mechanism › disease of genetic or genomic mechanism › hereditary disease › autosomal genetic disease › autosomal dominant disease › autosomal dominant nonsyndromic hearing losshearing loss, autosomal dominant 34, with or without inflammation

Related subtypes (75): autosomal dominant nonsyndromic hearing loss 1, autosomal dominant nonsyndromic hearing loss 2A, autosomal dominant nonsyndromic hearing loss 4A, autosomal dominant nonsyndromic hearing loss 6, autosomal dominant nonsyndromic hearing loss 5, autosomal dominant nonsyndromic hearing loss 10, autosomal dominant nonsyndromic hearing loss 11, autosomal dominant nonsyndromic hearing loss 9, autosomal dominant nonsyndromic hearing loss 7, autosomal dominant nonsyndromic hearing loss 12, autosomal dominant nonsyndromic hearing loss 3A, autosomal dominant nonsyndromic hearing loss 13, autosomal dominant nonsyndromic hearing loss 15, autosomal dominant nonsyndromic hearing loss 17, autosomal dominant nonsyndromic hearing loss 16, autosomal dominant nonsyndromic hearing loss 20, autosomal dominant nonsyndromic hearing loss 23, autosomal dominant nonsyndromic hearing loss 25, autosomal dominant nonsyndromic hearing loss 18, autosomal dominant nonsyndromic hearing loss 24, autosomal dominant nonsyndromic hearing loss 22, autosomal dominant nonsyndromic hearing loss 30, autosomal dominant nonsyndromic hearing loss 36, autosomal dominant nonsyndromic hearing loss 21, autosomal dominant nonsyndromic hearing loss 44, autosomal dominant nonsyndromic hearing loss 48, autosomal dominant nonsyndromic hearing loss 41, autosomal dominant nonsyndromic hearing loss 49, autosomal dominant nonsyndromic hearing loss 43, autosomal dominant nonsyndromic hearing loss 28, autosomal dominant nonsyndromic hearing loss 31, autosomal dominant nonsyndromic hearing loss 47, autosomal dominant auditory neuropathy 1, autosomal dominant nonsyndromic hearing loss 53, autosomal dominant nonsyndromic hearing loss 27, autosomal dominant nonsyndromic hearing loss 59, autosomal dominant nonsyndromic hearing loss 3B, autosomal dominant nonsyndromic hearing loss 2B, autosomal dominant nonsyndromic hearing loss 50, autosomal dominant nonsyndromic hearing loss 51, autosomal dominant nonsyndromic hearing loss 64, autosomal dominant nonsyndromic hearing loss 33, autosomal dominant nonsyndromic hearing loss 4B, autosomal dominant nonsyndromic hearing loss 56, autosomal dominant nonsyndromic hearing loss 54, autosomal dominant nonsyndromic hearing loss 58, autosomal dominant nonsyndromic hearing loss 65, autosomal dominant nonsyndromic hearing loss 67, autosomal dominant nonsyndromic hearing loss 40, autosomal dominant nonsyndromic hearing loss 69, autosomal dominant nonsyndromic hearing loss 68, autosomal dominant nonsyndromic hearing loss 70, autosomal dominant nonsyndromic hearing loss 66, hearing loss, autosomal dominant 74, hearing loss, autosomal dominant 77, hearing loss, autosomal dominant 81, hearing loss, autosomal dominant 82, hearing loss, autosomal dominant 83, hearing loss, autosomal dominant 84, hearing loss, autosomal dominant 80, hearing loss, autosomal dominant 37, hearing loss, autosomal dominant 75, hearing loss, autosomal dominant 76, hearing loss, autosomal dominant 71, hearing loss, autosomal dominant 72, hearing loss, autosomal dominant 73, hearing loss, autosomal dominant 78, hearing loss, autosomal dominant 79, hearing loss, autosomal dominant 85, hearing loss, autosomal dominant 86, hearing loss, autosomal dominant 87, hearing loss, autosomal dominant 88, hearing loss, autosomal dominant 89, hearing loss, autosomal dominant 90, autosomal dominant nonsyndromic hearing loss 91

Genetics & variants

GWAS landscape

No GWAS associations recorded — common-variant (GWAS) studies don’t cover this disease (typical for Mendelian / rare diseases). See the curated gene cohort and Mendelian overlap below.

Variant details and genetic-evidence tiers

ClinVar germline variants

168 retrieved; paginated sample, class counts are floors:

111 uncertain significance, 27 conflicting classifications of pathogenicity, 13 benign/likely benign, 12 likely benign, 3 pathogenic/likely pathogenic, 2 pathogenic

ClinVarVariant (HGVS)GeneClassificationReview
1188124NM_001243133.2(NLRP3):c.2575T>C (p.Tyr859His)NLRP3Pathogenic/Likely pathogeniccriteria provided, multiple submitters, no conflicts
4370NM_001243133.2(NLRP3):c.1316C>T (p.Ala439Val)NLRP3Pathogenic/Likely pathogeniccriteria provided, multiple submitters, no conflicts
4379NM_001243133.2(NLRP3):c.1058T>C (p.Leu353Pro)NLRP3Pathogeniccriteria provided, multiple submitters, no conflicts
97960NM_001243133.2(NLRP3):c.2576A>G (p.Tyr859Cys)NLRP3Pathogenic/Likely pathogeniccriteria provided, multiple submitters, no conflicts
97987NM_001243133.2(NLRP3):c.931G>A (p.Glu311Lys)NLRP3Pathogeniccriteria provided, multiple submitters, no conflicts
1058144NM_001243133.2(NLRP3):c.1371G>T (p.Glu457Asp)NLRP3Conflicting classifications of pathogenicitycriteria provided, conflicting classifications
1446237NM_001243133.2(NLRP3):c.2273T>C (p.Val758Ala)NLRP3Conflicting classifications of pathogenicitycriteria provided, conflicting classifications
1548717NM_001243133.2(NLRP3):c.1650G>A (p.Lys550=)NLRP3Conflicting classifications of pathogenicitycriteria provided, conflicting classifications
1980828NM_001243133.2(NLRP3):c.800A>G (p.Gln267Arg)NLRP3Conflicting classifications of pathogenicitycriteria provided, conflicting classifications
234288NM_001243133.2(NLRP3):c.404G>A (p.Arg135His)NLRP3Conflicting classifications of pathogenicitycriteria provided, conflicting classifications
234304NM_001243133.2(NLRP3):c.2611G>A (p.Ala871Thr)NLRP3Conflicting classifications of pathogenicitycriteria provided, conflicting classifications
234305NM_001243133.2(NLRP3):c.2738C>T (p.Thr913Met)NLRP3Conflicting classifications of pathogenicitycriteria provided, conflicting classifications
2502900NM_001243133.2(NLRP3):c.2630C>G (p.Ala877Gly)NLRP3Conflicting classifications of pathogenicitycriteria provided, conflicting classifications
296940NM_001243133.2(NLRP3):c.203T>C (p.Met68Thr)NLRP3Conflicting classifications of pathogenicitycriteria provided, conflicting classifications
296947NM_001243133.2(NLRP3):c.1361G>A (p.Gly454Glu)NLRP3Conflicting classifications of pathogenicitycriteria provided, conflicting classifications
3583443NM_001243133.2(NLRP3):c.2769A>T (p.Gly923=)NLRP3Conflicting classifications of pathogenicitycriteria provided, conflicting classifications
418133NM_001243133.2(NLRP3):c.1625C>T (p.Thr542Met)NLRP3Conflicting classifications of pathogenicitycriteria provided, conflicting classifications
4371NM_001243133.2(NLRP3):c.592G>A (p.Val198Met)NLRP3Conflicting classifications of pathogenicitycriteria provided, conflicting classifications
446409NM_001243133.2(NLRP3):c.2753G>A (p.Arg918Gln)NLRP3Conflicting classifications of pathogenicitycriteria provided, conflicting classifications
449120NM_001243133.2(NLRP3):c.638A>G (p.His213Arg)NLRP3Conflicting classifications of pathogenicitycriteria provided, conflicting classifications
536887NM_001243133.2(NLRP3):c.1639A>T (p.Ser547Cys)NLRP3Conflicting classifications of pathogenicitycriteria provided, conflicting classifications
583341NM_001243133.2(NLRP3):c.2120C>A (p.Pro707Gln)NLRP3Conflicting classifications of pathogenicitycriteria provided, conflicting classifications
625986NM_001243133.2(NLRP3):c.2098G>A (p.Asp700Asn)NLRP3Conflicting classifications of pathogenicitycriteria provided, conflicting classifications
711518NM_001243133.2(NLRP3):c.3048A>C (p.Leu1016Phe)NLRP3Conflicting classifications of pathogenicitycriteria provided, conflicting classifications
787085NM_001243133.2(NLRP3):c.2571A>G (p.Arg857=)NLRP3Conflicting classifications of pathogenicitycriteria provided, conflicting classifications
875720NM_001243133.2(NLRP3):c.122G>A (p.Arg41Lys)NLRP3Conflicting classifications of pathogenicitycriteria provided, conflicting classifications
946043NM_001243133.2(NLRP3):c.2686T>C (p.Ser896Pro)NLRP3Conflicting classifications of pathogenicitycriteria provided, conflicting classifications
946684NM_001243133.2(NLRP3):c.2982G>C (p.Gln994His)NLRP3Conflicting classifications of pathogenicitycriteria provided, conflicting classifications
952546NM_001243133.2(NLRP3):c.564C>A (p.Ile188=)NLRP3Conflicting classifications of pathogenicitycriteria provided, conflicting classifications
953918NM_001243133.2(NLRP3):c.1090C>A (p.Arg364=)NLRP3Conflicting classifications of pathogenicitycriteria provided, conflicting classifications

Genes & proteins

Mendelian disease overlap and somatic drivers

GenCC: 0 · Orphanet: 4 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0

Orphanet rare-disease linkage (cohort genes)

GeneOrphanet IDRare disease
NLRP3Orphanet:1451CINCA syndrome
NLRP3Orphanet:47045Familial cold urticaria
NLRP3Orphanet:575Muckle-Wells syndrome
NLRP3Orphanet:647815Keratitis fugax hereditaria

Cohort genes → proteins

1 cohort genes, 1 distinct canonical proteins.

Evidence partition

SubsetGenes
multi_evidence1

Cohort genes (full)

SymbolHGNCEnsemblUniProtNameEvidence
NLRP3HGNC:16400ENSG00000162711Q96P20NACHT, LRR and PYD domains-containing protein 3clinvar

Cohort function summary

Lead sentence per gene, UniProt-curated.

SymbolProtein nameFunction (lead sentence)
NLRP3NACHT, LRR and PYD domains-containing protein 3Sensor component of the NLRP3 inflammasome, which mediates inflammasome activation in response to defects in membrane integrity, leading to secretion of inflammatory cytokines IL1B and IL18 and pyroptosis.

Protein-family classification

Druggable: 0 · Difficult: 0 · Unknown: 1 · Druggable fraction: 0.0

Family distribution

Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.

FamilyGenesFoldFDR
Other/Unknown11.8×0.558

Per-gene assignment

SymbolFamilyDruggable?ECInterPro (top 3)
NLRP3Other/UnknownnoLeu-rich_rpt, DAPIN, NACHT_NTPase

Expression context

Cohort genes with no expression data: 0.

1 cohort gene are a single-cell marker in ≥1 SCXA experiment.

Breadth distribution (Bgee present_calls)

BucketGenes
narrow (1-5 tissues)0
moderate (6-20)0
broad (>20)1
unknown0

Top tissues across cohort

TissueCohort genes
leukocyte1
monocyte1
mononuclear cell1

Per-gene tissue summary (top 30)

SymbolBgee breadthFANTOM5 breadthSCXATop tissues
NLRP3172broadmarkermonocyte, mononuclear cell, leukocyte

Protein interactions among cohort

Intra-cohort edges: 0.

Hub genes (top 10 by interactor count)

SymbolInteractor count
NLRP33,797

Structural data

PDB: 1 · AlphaFold-only: 0 · No structure: 0

Cohort genes with PDB structures (top 30)

SymbolUniProtPDB entries
NLRP3Q96P2024

Function

Pathway analysis

Distinct Reactome pathways touched by cohort: 7. Enrichment computed across 1 evidence-associated genes (1 with Reactome annotation).

Pathways by enrichment

Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 1 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.

PathwayCohort genesFoldFDRSample cohort genes
The NLRP3 inflammasome1671.8×0.005NLRP3
Purinergic signaling in leishmaniasis infection1423.0×0.005NLRP3
Turbulent (oscillatory, disturbed) flow shear stress activates signaling by PIEZO1 and integrins in endothelial cells1356.9×0.005NLRP3
Metalloprotease DUBs1300.5×0.005NLRP3
SARS-CoV-1 activates/modulates innate immune responses1271.9×0.005NLRP3
Cytoprotection by HMOX11184.2×0.006NLRP3
SARS-CoV-2 activates/modulates innate and adaptive immune responses189.2×0.011NLRP3

GO biological processes by enrichment

Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 1 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.

GO termCohort genesFoldFDRSample cohort genes
detection of biotic stimulus14213.0×0.003NLRP3
negative regulation of acute inflammatory response12407.4×0.003NLRP3
positive regulation of type 2 immune response12407.4×0.003NLRP3
NLRP3 inflammasome complex assembly12407.4×0.003NLRP3
positive regulation of T-helper 2 cell differentiation12106.5×0.003NLRP3
osmosensory signaling pathway11532.0×0.003NLRP3
positive regulation of T-helper 2 cell cytokine production11532.0×0.003NLRP3
pattern recognition receptor signaling pathway1991.3×0.004NLRP3
positive regulation of interleukin-4 production1561.7×0.005NLRP3
negative regulation of interleukin-1 beta production1510.7×0.005NLRP3
pyroptotic inflammatory response1510.7×0.005NLRP3
negative regulation of non-canonical NF-kappaB signal transduction1510.7×0.005NLRP3
positive regulation of interleukin-1 beta production1259.3×0.008NLRP3
positive regulation of non-canonical NF-kappaB signal transduction1255.3×0.008NLRP3
defense response1216.1×0.008NLRP3
obsolete positive regulation of NF-kappaB transcription factor activity1205.5×0.008NLRP3
cellular response to virus1200.6×0.008NLRP3
regulation of inflammatory response1168.5×0.009NLRP3
protein maturation1163.6×0.009NLRP3
positive regulation of inflammatory response1145.3×0.010NLRP3
negative regulation of inflammatory response1137.0×0.010NLRP3
protein homooligomerization1122.1×0.010NLRP3
cellular response to lipopolysaccharide198.0×0.012NLRP3
inflammatory response137.7×0.031NLRP3
innate immune response133.6×0.033NLRP3
apoptotic process128.7×0.038NLRP3
signal transduction116.1×0.065NLRP3
positive regulation of transcription by RNA polymerase II114.9×0.067NLRP3

Therapeutics

Drug target analysis

Approved (phase 4): 1 · Phase ≥3: 1 · Phased (≥1): 1 · Undrugged: 0

Druggability breadth: 0 of 1 evidence-associated genes (0%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).

Genes with an approved drug

The molecule shown is one approved compound that hits the gene — not necessarily a drug of choice or one indicated for this disease.

SymbolExample approved molecule
NLRP3CLOMIPHENE

Top cohort targets by molecule count

SymbolMoleculesMax phase
NLRP3114

Drugs targeting cohort genes (top 30)

MoleculeMax phaseTargets in cohort
CLOMIPHENE4NLRP3
GLYBURIDE4NLRP3
CURCUMIN3NLRP3
JT-0013NLRP3
TRICLOCARBAN2NLRP3
CLIOXANIDE2NLRP3
DAPANSUTRILE2NLRP3
USNOFLAST2NLRP3
INZOMELID1NLRP3
BMS-9862991NLRP3
NT-07961NLRP3

Bioactivity and enzyme data

Enzyme cohort genes (≥1 EC): 0.

Cohort genes with ChEMBL bioactivity (full, sorted by assay count)

SymbolAssaysType breakdown
NLRP3534Binding:527, Functional:6, ADMET:1

Cohort genes with high screening signal

≥100 ChEMBL assays — a studied-ness signal; see Therapeutics for approved-drug status.

SymbolChEMBL assays
NLRP3534

Pharmacogenomics

Cohort genes with a PharmGKB record: 1; with CPIC/DPWG dosing guidelines: 0.

No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).

Chemical tractability of cohort targets

11 approved/phased compounds have measured bioactivity against a cohort gene (and aren’t yet in disease-level trials). This is a research / tractability signal, NOT a therapeutic recommendation — a bioactivity row often reflects off-target or screening binding (e.g. promiscuous kinase inhibitors against a cohort kinase), implying no disease mechanism.

CompoundMax phaseCohort target (bioactivity)
CLOMIPHENE4NLRP3
GLYBURIDE4NLRP3
CURCUMIN3NLRP3
JT-0013NLRP3
TRICLOCARBAN2NLRP3
CLIOXANIDE2NLRP3
DAPANSUTRILE2NLRP3
USNOFLAST2NLRP3
INZOMELID1NLRP3
BMS-9862991NLRP3
NT-07961NLRP3

Druggability pyramid

Cohort genes binned by druggability tier (high → low):

TierDefinitionGenesSymbols
AApproved (phase 4 drug)1NLRP3
BPhased (≥1) drug, not yet approved0
CDruggable family + PDB, no drug0
DDruggable family + AlphaFold only, no drug0
EDifficult family or no structure, no drug0

Undrugged target profiles

0 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).

Clinical trials & evidence

Clinical trials

Clinical trials: 0.