heart-hand syndrome, Slovenian type
diseaseOn this page
Also known as atriodigital dysplasia, Slovenian typeCardiac conduction disease-dilated cardiomyopathy-brachydactyly syndrome
Summary
heart-hand syndrome, Slovenian type (MONDO:0012417) is a disease caused by LMNA (GenCC Strong), with 1 cohort gene.
At a glance
- Prevalence: <1 / 1 000 000 (Worldwide) [Orphanet-validated]
- Causal gene: LMNA (GenCC Strong)
- Cohort genes: 1
- ClinVar variants: 195
- Phenotypes (HPO): 7
Clinical features
Epidemiology
Prevalence records
2 prevalence record(s), Orphanet:
| Type | Class | Value | Geography | Validation |
|---|---|---|---|---|
| Cases/families | 14 | Worldwide | Validated | |
| Point prevalence | <1 / 1 000 000 | Worldwide | Validated |
Signs & symptoms
Clinical features (HPO)
7 HPO clinical features (Orphanet curated; top 7 by frequency):
| HPO ID | Term | Frequency |
|---|---|---|
| HP:0001644 | Dilated cardiomyopathy | Very frequent (80-99%) |
| HP:0001760 | Abnormal foot morphology | Very frequent (80-99%) |
| HP:0005115 | Supraventricular arrhythmia | Very frequent (80-99%) |
| HP:0005150 | Abnormal atrioventricular conduction | Very frequent (80-99%) |
| HP:0011675 | Arrhythmia | Very frequent (80-99%) |
| HP:0011702 | Abnormal electrophysiology of sinoatrial node origin | Very frequent (80-99%) |
| HP:0001156 | Brachydactyly | Occasional (5-29%) |
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | heart-hand syndrome, Slovenian type |
| Mondo ID | MONDO:0012417 |
| MeSH | C535852 |
| OMIM | 610140 |
| Orphanet | 168796 |
| ICD-11 | 1814304618 |
| SNOMED CT | 721014007 |
| UMLS | C1857829 |
| MedGen | 341859 |
| GARD | 0009846 |
| Is cancer (heuristic) | no |
Also known as: atriodigital dysplasia, Slovenian type · Cardiac conduction disease-dilated cardiomyopathy-brachydactyly syndrome · heart-hand syndrome, Slovenian type
Data availability: 195 ClinVar variants · 4 GenCC gene-disease records.
Disease family
Classification path: disease › human disease › disease by etiologic mechanism › disease of genetic or genomic mechanism › hereditary disease › autosomal genetic disease › autosomal dominant disease › heart-hand syndrome, Slovenian type
Related subtypes (191): autosomal dominant polycystic liver disease, cerebral arteriopathy, autosomal dominant, with subcortical infarcts and leukoencephalopathy, type 1, tuberous sclerosis, Treacher-Collins syndrome, hereditary breast ovarian cancer syndrome, autosomal dominant polycystic kidney disease, Lynch syndrome, branchio-oto-renal syndrome, autosomal dominant Aarskog syndrome, acroosteolysis dominant type, ADULT syndrome, autosomal dominant Alport syndrome, amelogenesis imperfecta type 1B, Townes-Brocks syndrome, nevoid basal cell carcinoma syndrome, blepharophimosis, ptosis, and epicanthus inversus syndrome, autosomal dominant brachyolmia, branchiooculofacial syndrome, pheochromocytoma/paraganglioma syndrome 4, cataract-aberrant oral frenula-growth delay syndrome, cherubism, autosomal dominant chondrodysplasia punctata, autosomal dominant popliteal pterygium syndrome, blepharocheilodontic syndrome, cochleosaccular degeneration-cataract syndrome, renal coloboma syndrome, Beare-Stevenson cutis gyrata syndrome, autosomal dominant vibratory urticaria, neurohypophyseal diabetes insipidus, autosomal dominant Kenny-Caffey syndrome, Rapp-Hodgkin syndrome, Ehlers-Danlos syndrome, classic type, autosomal dominant Ehlers-Danlos syndrome, vascular type, multiple endocrine neoplasia type 1, Coffin-Siris syndrome 1, isolated congenital adermatoglyphia, Flynn-Aird syndrome, Frasier syndrome, hand-foot-genital syndrome, Holt-Oram syndrome, hyperkeratosis-hyperpigmentation syndrome, autosomal dominant ichthyosis vulgaris, hyper-IgE recurrent infection syndrome 1, autosomal dominant, autosomal dominant keratitis, autosomal dominant keratitis-ichthyosis-hearing loss syndrome, LADD syndrome, trichorhinophalangeal syndrome type II, Noonan syndrome with multiple lentigines, microcephaly with or without chorioretinopathy, lymphedema, or intellectual disability, Marfan syndrome, melanoma, cutaneous malignant, susceptibility to, 2, autosomal dominant primary microcephaly, autosomal dominant progressive external ophthalmoplegia, monilethrix, Muir-Torre syndrome, autosomal dominant myoglobinuria, autosomal dominant centronuclear myopathy, nail-patella syndrome, multiple endocrine neoplasia type 2B, autosomal dominant omodysplasia, pheochromocytoma/paraganglioma syndrome 1, Pelger-Huet anomaly, multiple endocrine neoplasia type 2A, piebaldism, autosomal dominant medullary cystic kidney disease with or without hyperuricemia, generalized juvenile polyposis/juvenile polyposis coli, juvenile polyposis/hereditary hemorrhagic telangiectasia syndrome, Peutz-Jeghers syndrome, contractures, pterygia, and spondylocarpotarsal fusion syndrome 1A, autosomal dominant distal renal tubular acidosis, retinoschisis, autosomal dominant, autosomal dominant Robinow syndrome, scapuloperoneal spinal muscular atrophy, autosomal dominant, autosomal dominant sideroblastic anemia, spondyloepiphyseal dysplasia tarda, autosomal dominant, proximal symphalangism, calcaneonavicular coalition, thanatophoric dysplasia type 1, trichorhinophalangeal syndrome type I, Muckle-Wells syndrome, autosomal dominant hypophosphatemic rickets, von Hippel-Lindau disease, Denys-Drash syndrome, autosomal dominant severe congenital neutropenia, Costello syndrome, EEC syndrome, multiple cutaneous and mucosal venous malformations, diffuse nonepidermolytic palmoplantar keratoderma, Timothy syndrome, pheochromocytoma/paraganglioma syndrome 2, spondyloepimetaphyseal dysplasia with multiple dislocations, Brooke-Spiegler syndrome, macrocephaly-autism syndrome, pheochromocytoma/paraganglioma syndrome 3, Duane-radial ray syndrome, PCWH syndrome, congenital stationary night blindness autosomal dominant 3, mandibulofacial dysostosis-microcephaly syndrome, multiple endocrine neoplasia type 4, juvenile cataract-microcornea-renal glucosuria syndrome, Crouzon syndrome-acanthosis nigricans syndrome, Birk-Barel syndrome, thrombophilia due to protein S deficiency, autosomal dominant, dyskeratosis congenita, autosomal dominant 2, dyskeratosis congenita, autosomal dominant 3, colorectal cancer, hereditary nonpolyposis, type 6, colorectal cancer, hereditary nonpolyposis, type 7, brain small vessel disease 2A, autosomal dominant, intellectual disability, autosomal dominant 14, intellectual disability, autosomal dominant 15, intellectual disability, autosomal dominant 16, hypopigmentation-punctate palmoplantar keratoderma syndrome, intellectual disability-facial dysmorphism syndrome due to SETD5 haploinsufficiency, postaxial polydactyly-anterior pituitary anomalies-facial dysmorphism syndrome, intellectual developmental disorder with microcephaly and with or without ocular malformations or hypogonadotropic hypogonadism, intellectual disability, autosomal dominant 29, intellectual disability, autosomal dominant 30, Houge-Janssens syndrome 2, severe achondroplasia-developmental delay-acanthosis nigricans syndrome, dyskeratosis congenita, autosomal dominant 6, epidermolysis bullosa simplex 6, generalized, with scarring and hair loss, autosomal dominant complex spastic paraplegia, early-onset autosomal dominant Alzheimer disease, muscular dystrophy, limb-girdle, autosomal dominant, Feingold syndrome, Carney complex, neuronopathy, distal hereditary motor, autosomal dominant, autosomal dominant coarctation of aorta, autosomal dominant spondylocostal dysostosis, autosomal dominant hypohidrotic ectodermal dysplasia, Cowden disease, autosomal dominant distal myopathy, autosomal dominant rhegmatogenous retinal detachment, palmoplantar keratoderma-spastic paralysis syndrome, Alagille syndrome due to a JAG1 point mutation, PTEN hamartoma tumor syndrome, gastric adenocarcinoma and proximal polyposis of the stomach, autosomal dominant proximal renal tubular acidosis, autosomal dominant spastic ataxia, Waardenburg syndrome, hereditary retinoblastoma, autosomal dominant hypocalcemia, Li-Fraumeni syndrome, Loeys-Dietz syndrome, hereditary hemorrhagic telangiectasia, hereditary inclusion body myopathy-joint contractures-ophthalmoplegia syndrome, microcephalic osteodysplastic dysplasia, Saul-Wilson type, autosomal dominant intermediate Charcot-Marie-Tooth disease, autosomal dominant cutis laxa, autosomal dominant nonsyndromic hearing loss, autosomal dominant optic atrophy, autosomal dominant Emery-Dreifuss muscular dystrophy, autosomal dominant cerebellar ataxia, autosomal dominant osteopetrosis, autosomal dominant epidermolytic ichthyosis, ventricular arrhythmias due to cardiac ryanodine receptor calcium release deficiency syndrome, distal arthrogryposis type 2B1, neurofibromatosis, autosomal dominant cataract, arthrogryposis, distal, type 2B2, arthrogryposis, distal, type 2B3, Charcot-Marie-Tooth disease, demyelinating, type 1G, Delpire-McNeill syndrome, LAMA5-related multisystemic syndrome, autosomal dominant oculocutaneous albinism, Charcot-Marie-tooth disease, axonal, type 2DD, Pilarowski-Bjornsson syndrome, intellectual disability, autosomal dominant, fatty acyl-CoA reductase 1 upregulation, GUCY2D-related dominant retinopathy, RPE65-related dominant retinopathy, autosomal dominant titinopathy, NOG-related symphalangism spectrum disorder, ALPL-related autosomal dominant hypophosphatasia, MYH10-related neurodevelopmental disorder with congenital anomalies, spastic paraplegia 30A, autosomal dominant, TMEM127-related tumor predisposition, MAX-related tumor predisposition, BMPR1A-related juvenile polyposis syndrome, RP1-related dominant retinopathy, Birt-Hogg-Dube syndrome, inclusion body myopathy and brain white matter abnormalities, KINSSHIP syndrome, autosomal dominant nebulin-related myopathy, IMPG1-related dominant retinopathy, PROM1-related dominant retinopathy, PURA-related severe neonatal hypotonia-seizures-encephalopathy syndrome, ALG8-related autosomal dominant polycystic kidney and/or liver disease, NOTCH1-related AOS spectrum disorder, FLNB-associated autosomal dominant filamin related bone disorder, familial antiphospholipid syndrome
Genetics & variants
GWAS landscape
No GWAS associations recorded — common-variant (GWAS) studies don’t cover this disease (typical for Mendelian / rare diseases). See the curated gene cohort and Mendelian overlap below.
Variant details and genetic-evidence tiers
ClinVar germline variants
195 retrieved; paginated sample, class counts are floors:
100 uncertain significance, 55 conflicting classifications of pathogenicity, 17 likely benign, 7 pathogenic/likely pathogenic, 6 benign/likely benign, 4 likely pathogenic, 4 pathogenic, 1 benign, 1 uncertain significance/uncertain risk allele
| ClinVar | Variant (HGVS) | Gene | Classification | Review |
|---|---|---|---|---|
| 14489 | NM_170707.4(LMNA):c.1444C>T (p.Arg482Trp) | LMNA | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 14495 | NM_170707.4(LMNA):c.1130G>A (p.Arg377His) | LMNA | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 1457399 | NM_170707.4(LMNA):c.822del (p.Arg275fs) | LMNA | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 200941 | NM_170707.4(LMNA):c.768G>A (p.Val256=) | LMNA | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 3595598 | NM_170707.4(LMNA):c.5del (p.Glu2fs) | LMNA | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 36473 | NM_170707.4(LMNA):c.1003C>T (p.Arg335Trp) | LMNA | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 48096 | NM_170707.4(LMNA):c.961C>T (p.Arg321Ter) | LMNA | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 66762 | NM_170707.4(LMNA):c.1045C>T (p.Arg349Trp) | LMNA | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 66800 | NM_170707.4(LMNA):c.1294C>T (p.Gln432Ter) | LMNA | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 66853 | NM_170707.4(LMNA):c.1608+1G>A | LMNA | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 66931 | NM_170707.4(LMNA):c.746G>A (p.Arg249Gln) | LMNA | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 1341358 | NM_170707.4(LMNA):c.168C>G (p.Asn56Lys) | LMNA | Likely pathogenic | criteria provided, single submitter |
| 1343751 | NM_170707.4(LMNA):c.1646_1647del (p.Val549fs) | LMNA | Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 66855 | NM_170707.4(LMNA):c.1609-12T>G | LMNA | Likely pathogenic | criteria provided, single submitter |
| 66883 | NM_170707.4(LMNA):c.265C>T (p.Arg89Cys) | LMNA | Likely pathogenic | no assertion criteria provided |
| 48078 | NM_170707.4(LMNA):c.749C>T (p.Ala250Val) | LMNA | Uncertain significance/Uncertain risk allele | criteria provided, multiple submitters, no conflicts |
| 1029259 | NM_170707.4(LMNA):c.187A>C (p.Ile63Leu) | LMNA | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 1284657 | NM_170707.4(LMNA):c.1786_1800del (p.Asp596_Ala600del) | LMNA | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 14486 | NM_170707.4(LMNA):c.1445G>A (p.Arg482Gln) | LMNA | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 14494 | NM_170707.4(LMNA):c.1745G>A (p.Arg582His) | LMNA | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 14498 | NM_170707.4(LMNA):c.892C>T (p.Arg298Cys) | LMNA | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 14499 | NM_170707.4(LMNA):c.1580G>A (p.Arg527His) | LMNA | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 14517 | NM_170707.4(LMNA):c.1718C>T (p.Ser573Leu) | LMNA | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 14519 | NM_170707.4(LMNA):c.1195C>T (p.Arg399Cys) | LMNA | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 14520 | NM_170707.4(LMNA):c.1318G>A (p.Val440Met) | LMNA | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 14527 | NM_170707.4(LMNA):c.1930C>T (p.Arg644Cys) | LMNA | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 1501721 | NM_170707.4(LMNA):c.11C>A (p.Pro4Gln) | LMNA | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 1518015 | NM_170707.4(LMNA):c.244G>C (p.Glu82Gln) | LMNA | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 161291 | NM_170707.4(LMNA):c.1931G>A (p.Arg644His) | LMNA | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 163878 | NM_170707.4(LMNA):c.1634G>A (p.Arg545His) | LMNA | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 40 · Orphanet: 21 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
GenCC gene–disease validity (cohort genes)
the Disease column is the GenCC-asserted condition — a cohort gene’s strongest validity may be for a related predisposition syndrome.
| Gene | Classification | Inheritance | Disease | Records |
|---|---|---|---|---|
| LMNA | Strong | Autosomal dominant | heart-hand syndrome, Slovenian type | 40 |
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|---|---|
| LMNA | Orphanet:154 | Familial isolated dilated cardiomyopathy |
| LMNA | Orphanet:157973 | Congenital muscular dystrophy due to LMNA mutation |
| LMNA | Orphanet:1662 | Restrictive dermopathy |
| LMNA | Orphanet:168796 | Heart-hand syndrome, Slovenian type |
| LMNA | Orphanet:2229 | Dilated cardiomyopathy-hypergonadotropic hypogonadism syndrome |
| LMNA | Orphanet:2348 | Familial partial lipodystrophy, Dunnigan type |
| LMNA | Orphanet:280365 | Autosomal semi-dominant severe lipodystrophic laminopathy |
| LMNA | Orphanet:293888 | Inherited isolated arrhythmogenic cardiomyopathy, dominant-left variant |
| LMNA | Orphanet:293899 | Inherited isolated arrhythmogenic ventricular dysplasia, biventricular variant |
| LMNA | Orphanet:293910 | Inherited isolated arrhythmogenic cardiomyopathy, dominant-right variant |
| LMNA | Orphanet:300751 | Familial dilated cardiomyopathy with conduction defect due to LMNA mutation |
| LMNA | Orphanet:363618 | LMNA-related cardiocutaneous progeria syndrome |
| LMNA | Orphanet:54260 | Left ventricular noncompaction |
| LMNA | Orphanet:675396 | Epithelioid hemangioma |
| LMNA | Orphanet:740 | Hutchinson-Gilford progeria syndrome |
| LMNA | Orphanet:79084 | Familial partial lipodystrophy, Köbberling type |
| LMNA | Orphanet:79474 | Atypical Werner syndrome |
| LMNA | Orphanet:90153 | Mandibuloacral dysplasia with type A lipodystrophy |
| LMNA | Orphanet:98853 | Autosomal dominant Emery-Dreifuss muscular dystrophy |
| LMNA | Orphanet:98855 | Autosomal recessive Emery-Dreifuss muscular dystrophy |
| LMNA | Orphanet:98856 | Charcot-Marie-Tooth disease type 2B1 |
Cohort genes → proteins
1 cohort genes, 1 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|---|
| multi_evidence | 1 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|---|---|---|---|---|
| LMNA | HGNC:6636 | ENSG00000160789 | P02545 | Prelamin-A/C | gencc,clinvar |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|---|---|
| LMNA | Prelamin-A/C | Lamins are intermediate filament proteins that assemble into a filamentous meshwork, and which constitute the major components of the nuclear lamina, a fibrous layer on the nucleoplasmic side of the inner nuclear membrane. |
Protein-family classification
Druggable: 0 · Difficult: 0 · Unknown: 1 · Druggable fraction: 0.0
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|---|---|---|
| Other/Unknown | 1 | 1.8× | 0.558 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|---|---|---|---|
| LMNA | Other/Unknown | no | Lamin_tail_dom, IF_conserved, Lamin_tail_dom_sf |
Expression context
Cohort genes with no expression data: 0.
1 cohort gene are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 0 |
| broad (>20) | 1 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|---|
| mucosa of stomach | 1 |
| nipple | 1 |
| skin of abdomen | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|---|---|---|---|
| LMNA | 295 | ubiquitous | marker | nipple, mucosa of stomach, skin of abdomen |
Protein interactions among cohort
Intra-cohort edges: 0.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|---|
| LMNA | 7,173 |
Structural data
PDB: 1 · AlphaFold-only: 0 · No structure: 0
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|---|---|
| LMNA | P02545 | 28 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 15. Enrichment computed across 1 evidence-associated genes (1 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 1 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| Breakdown of the nuclear lamina | 1 | 3806.7× | 0.004 | LMNA |
| Depolymerization of the Nuclear Lamina | 1 | 761.3× | 0.005 | LMNA |
| Initiation of Nuclear Envelope (NE) Reformation | 1 | 601.0× | 0.005 | LMNA |
| IRE1alpha activates chaperones | 1 | 519.1× | 0.005 | LMNA |
| Deregulated CDK5 triggers multiple neurodegenerative pathways in Alzheimer’s disease models | 1 | 519.1× | 0.005 | LMNA |
| Nuclear Envelope Breakdown | 1 | 456.8× | 0.005 | LMNA |
| Unfolded Protein Response (UPR) | 1 | 356.9× | 0.006 | LMNA |
| Oncogenic MAPK signaling | 1 | 248.3× | 0.008 | LMNA |
| XBP1(S) activates chaperone genes | 1 | 215.5× | 0.008 | LMNA |
| Signaling by BRAF and RAF1 fusions | 1 | 170.4× | 0.009 | LMNA |
| Meiotic synapsis | 1 | 141.0× | 0.010 | LMNA |
| Diseases of signal transduction by growth factor receptors and second messengers | 1 | 56.8× | 0.022 | LMNA |
| Cellular responses to stress | 1 | 36.8× | 0.031 | LMNA |
| Cellular responses to stimuli | 1 | 31.5× | 0.034 | LMNA |
| Disease | 1 | 13.1× | 0.076 | LMNA |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 1 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| DNA double-strand break attachment to nuclear envelope | 1 | 5617.3× | 0.002 | LMNA |
| establishment or maintenance of microtubule cytoskeleton polarity | 1 | 4213.0× | 0.002 | LMNA |
| nuclear pore localization | 1 | 3370.4× | 0.002 | LMNA |
| negative regulation of mesenchymal cell proliferation | 1 | 2808.7× | 0.002 | LMNA |
| protein localization to nuclear envelope | 1 | 2106.5× | 0.002 | LMNA |
| regulation of protein localization to nucleus | 1 | 2106.5× | 0.002 | LMNA |
| negative regulation of cardiac muscle hypertrophy in response to stress | 1 | 1872.4× | 0.002 | LMNA |
| ventricular cardiac muscle cell development | 1 | 1532.0× | 0.002 | LMNA |
| nuclear envelope organization | 1 | 991.3× | 0.003 | LMNA |
| regulation of telomere maintenance | 1 | 842.6× | 0.003 | LMNA |
| negative regulation of release of cytochrome c from mitochondria | 1 | 802.5× | 0.003 | LMNA |
| nuclear migration | 1 | 732.7× | 0.003 | LMNA |
| double-strand break repair via nonhomologous end joining | 1 | 421.3× | 0.004 | LMNA |
| negative regulation of extrinsic apoptotic signaling pathway | 1 | 421.3× | 0.004 | LMNA |
| protein localization to nucleus | 1 | 351.1× | 0.005 | LMNA |
| cellular senescence | 1 | 295.6× | 0.005 | LMNA |
| heterochromatin formation | 1 | 255.3× | 0.006 | LMNA |
| muscle organ development | 1 | 166.8× | 0.008 | LMNA |
| regulation of cell migration | 1 | 157.5× | 0.008 | LMNA |
| protein import into nucleus | 1 | 144.0× | 0.009 | LMNA |
| regulation of protein stability | 1 | 125.8× | 0.009 | LMNA |
| cellular response to hypoxia | 1 | 121.2× | 0.009 | LMNA |
| intracellular protein localization | 1 | 104.7× | 0.010 | LMNA |
| negative regulation of cell population proliferation | 1 | 42.1× | 0.025 | LMNA |
| positive regulation of gene expression | 1 | 38.7× | 0.026 | LMNA |
Therapeutics
Drug target analysis
Approved (phase 4): 1 · Phase ≥3: 1 · Phased (≥1): 1 · Undrugged: 0
Druggability breadth: 1 of 1 evidence-associated genes (100%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Genes with an approved drug
The molecule shown is one approved compound that hits the gene — not necessarily a drug of choice or one indicated for this disease.
| Symbol | Example approved molecule |
|---|---|
| LMNA | BEPRIDIL |
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|---|---|
| LMNA | 823 | 4 |
Drugs targeting cohort genes (top 30)
| Molecule | Max phase | Targets in cohort |
|---|---|---|
| BEPRIDIL | 4 | LMNA |
| PHENYLBUTAZONE | 4 | LMNA |
| CEFOTAXIME SODIUM | 4 | LMNA |
| DIENESTROL | 4 | LMNA |
| IFOSFAMIDE | 4 | LMNA |
| PROGESTERONE | 4 | LMNA |
| CLOTRIMAZOLE | 4 | LMNA |
| DAPSONE | 4 | LMNA |
| AMINOCAPROIC ACID | 4 | LMNA |
| FLUCONAZOLE | 4 | LMNA |
| COLCHICINE | 4 | LMNA |
| NABUMETONE | 4 | LMNA |
| OXAPROZIN | 4 | LMNA |
| BUMETANIDE | 4 | LMNA |
| GLIPIZIDE | 4 | LMNA |
| BROMFENAC | 4 | LMNA |
| ROPIVACAINE | 4 | LMNA |
| TIZANIDINE | 4 | LMNA |
| METAXALONE | 4 | LMNA |
| CARBAMAZEPINE | 4 | LMNA |
| SALMETEROL XINAFOATE | 4 | LMNA |
| AMIODARONE HYDROCHLORIDE | 4 | LMNA |
| METHYL SALICYLATE | 4 | LMNA |
| DIBUCAINE | 4 | LMNA |
| PHENELZINE | 4 | LMNA |
| HYDROCORTISONE ACETATE | 4 | LMNA |
| BRETYLIUM TOSYLATE | 4 | LMNA |
| IMIPRAMINE | 4 | LMNA |
| FURAZOLIDONE | 4 | LMNA |
| DROPERIDOL | 4 | LMNA |
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 0.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|---|---|
| LMNA | 12 | Binding:9, Functional:3 |
Pharmacogenomics
Cohort genes with a PharmGKB record: 1; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Chemical tractability of cohort targets
30 approved/phased compounds have measured bioactivity against a cohort gene (and aren’t yet in disease-level trials). This is a research / tractability signal, NOT a therapeutic recommendation — a bioactivity row often reflects off-target or screening binding (e.g. promiscuous kinase inhibitors against a cohort kinase), implying no disease mechanism.
| Compound | Max phase | Cohort target (bioactivity) |
|---|---|---|
| BEPRIDIL | 4 | LMNA |
| PHENYLBUTAZONE | 4 | LMNA |
| CEFOTAXIME SODIUM | 4 | LMNA |
| DIENESTROL | 4 | LMNA |
| IFOSFAMIDE | 4 | LMNA |
| PROGESTERONE | 4 | LMNA |
| CLOTRIMAZOLE | 4 | LMNA |
| DAPSONE | 4 | LMNA |
| AMINOCAPROIC ACID | 4 | LMNA |
| FLUCONAZOLE | 4 | LMNA |
| COLCHICINE | 4 | LMNA |
| NABUMETONE | 4 | LMNA |
| OXAPROZIN | 4 | LMNA |
| BUMETANIDE | 4 | LMNA |
| GLIPIZIDE | 4 | LMNA |
| BROMFENAC | 4 | LMNA |
| ROPIVACAINE | 4 | LMNA |
| TIZANIDINE | 4 | LMNA |
| METAXALONE | 4 | LMNA |
| CARBAMAZEPINE | 4 | LMNA |
| SALMETEROL XINAFOATE | 4 | LMNA |
| AMIODARONE HYDROCHLORIDE | 4 | LMNA |
| METHYL SALICYLATE | 4 | LMNA |
| DIBUCAINE | 4 | LMNA |
| PHENELZINE | 4 | LMNA |
| HYDROCORTISONE ACETATE | 4 | LMNA |
| BRETYLIUM TOSYLATE | 4 | LMNA |
| IMIPRAMINE | 4 | LMNA |
| FURAZOLIDONE | 4 | LMNA |
| DROPERIDOL | 4 | LMNA |
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|---|---|---|
| A | Approved (phase 4 drug) | 1 | LMNA |
| B | Phased (≥1) drug, not yet approved | 0 | |
| C | Druggable family + PDB, no drug | 0 | |
| D | Druggable family + AlphaFold only, no drug | 0 | |
| E | Difficult family or no structure, no drug | 0 |
Undrugged target profiles
0 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
Clinical trials & evidence
Clinical trials
Clinical trials: 0.
Related Atlas pages
- Cohort genes: LMNA