hemophilia B
diseaseOn this page
Also known as Christmas diseasecongenital factor IX deficiencycongenital factor IX disorderfactor IX deficiencyhaemophilia B Leydenhaemophilia B(M)haemophilia b, X-linked recessivehaemophilia type Bhem BHEMBhemophilia b, X-linked recessivehemophilia type Bhereditary Factor IX deficiencyhereditary Factor IX deficiency disease
Summary
hemophilia B (MONDO:0010604) is a disease caused by F9 (GenCC Strong), with 3 cohort genes and 170 clinical trials. Top therapeutic interventions include coagulation factor ix recombinant human, eftrenonacog alfa, and etranacogene dezaparvovec.
At a glance
- Prevalence: 1-9 / 100 000 (Europe) [Orphanet-validated]
- Causal gene: F9 (GenCC Strong)
- Cohort genes: 3
- ClinVar variants: 635
- Phenotypes (HPO): 14
- Clinical trials: 170
Clinical features
Epidemiology
Prevalence records
101 prevalence record(s), Orphanet, top 20 (validated / broadest geography first):
| Type | Class | Value | Geography | Validation |
|---|---|---|---|---|
| Prevalence at birth | 1-9 / 100 000 | 1.665 | Worldwide | Validated |
| Point prevalence | 1-9 / 100 000 | 3 | Europe | Validated |
| Point prevalence | 1-9 / 100 000 | 1 | Albania | Validated |
| Point prevalence | 1-9 / 1 000 000 | 0.44 | Algeria | Validated |
| Point prevalence | 1-9 / 1 000 000 | 0.54 | Argentina | Validated |
| Point prevalence | 1-9 / 1 000 000 | 0.2 | Armenia | Validated |
| Point prevalence | 1-9 / 1 000 000 | 0.665 | Austria | Validated |
| Point prevalence | 1-9 / 1 000 000 | 0.16 | Azerbaijan | Validated |
| Point prevalence | <1 / 1 000 000 | 0.015 | Bangladesh | Validated |
| Point prevalence | 1-9 / 1 000 000 | 0.84 | Belarus | Validated |
| Point prevalence | 1-9 / 100 000 | 1.32 | Belgium | Validated |
| Point prevalence | 1-9 / 100 000 | 1.155 | Belize | Validated |
| Point prevalence | <1 / 1 000 000 | 0.045 | Bolivia | Validated |
| Point prevalence | 1-9 / 1 000 000 | 0.265 | Bosnia and Herzegovina | Validated |
| Point prevalence | 1-9 / 1 000 000 | 0.535 | Brazil | Validated |
| Point prevalence | 1-9 / 1 000 000 | 0.775 | Bulgaria | Validated |
| Point prevalence | 1-9 / 1 000 000 | 0.795 | Chile | Validated |
| Point prevalence | 1-9 / 1 000 000 | 0.405 | Colombia | Validated |
| Point prevalence | 1-9 / 1 000 000 | 0.645 | Costa rica | Validated |
| Point prevalence | 1-9 / 100 000 | 1.625 | Croatia | Validated |
Signs & symptoms
Clinical features (HPO)
14 HPO clinical features (Orphanet curated; top 14 by frequency):
| HPO ID | Term | Frequency |
|---|---|---|
| HP:0000790 | Hematuria | Very frequent (80-99%) |
| HP:0001058 | Poor wound healing | Very frequent (80-99%) |
| HP:0002170 | Intracranial hemorrhage | Very frequent (80-99%) |
| HP:0003010 | Prolonged bleeding time | Very frequent (80-99%) |
| HP:0003645 | Prolonged partial thromboplastin time | Very frequent (80-99%) |
| HP:0004406 | Spontaneous, recurrent epistaxis | Very frequent (80-99%) |
| HP:0004846 | Prolonged bleeding after surgery | Very frequent (80-99%) |
| HP:0005261 | Joint hemorrhage | Very frequent (80-99%) |
| HP:0006298 | Prolonged bleeding after dental extraction | Very frequent (80-99%) |
| HP:0011858 | Reduced factor IX activity | Very frequent (80-99%) |
| HP:0012233 | Intramuscular hematoma | Very frequent (80-99%) |
| HP:0012541 | Cephalohematoma | Very frequent (80-99%) |
| HP:0040232 | Delayed onset bleeding | Very frequent (80-99%) |
| HP:0400008 | Menometrorrhagia | Very frequent (80-99%) |
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | hemophilia B |
| Mondo ID | MONDO:0010604 |
| MeSH | D002836 |
| OMIM | 306900 |
| Orphanet | 98879 |
| DOID | DOID:12259 |
| ICD-10-CM | D67 |
| ICD-11 | 1901375668 |
| NCIT | C26721 |
| SNOMED CT | 41788008 |
| UMLS | C0008533 |
| MedGen | 945 |
| GARD | 0008732 |
| MedDRA | 10016077 |
| NORD | 1222 |
| Is cancer (heuristic) | no |
Also known as: Christmas disease · congenital factor IX deficiency · congenital factor IX disorder · factor IX deficiency · haemophilia B Leyden · haemophilia B(M) · haemophilia b, X-linked recessive · haemophilia type B · hem B · HEMB · hemophilia B · hemophilia b, X-linked recessive · hemophilia type B · hereditary Factor IX deficiency · hereditary Factor IX deficiency disease
Data availability: 635 ClinVar variants · 71 ClinGen variant curations · 2 GenCC gene-disease records · 6 cell lines.
Disease family
An umbrella term covering 4 Mondo subtypes.
Classification path: disease › human disease › disease by body system or component › hematologic disorder › hemorrhagic disease › hemophilia B
Related subtypes (27): inherited bleeding disorder, platelet-type, factor VII deficiency, factor X deficiency, purpura, vascular hemostatic disease, congenital factor V deficiency, congenital high-molecular-weight kininogen deficiency, congenital factor XII deficiency, alpha-2-plasmin inhibitor deficiency, hemophilia A, East Texas bleeding disorder, congenital factor XI deficiency, inherited prekallikrein deficiency, congenital plasminogen activator inhibitor type 1 deficiency, thrombomodulin-related bleeding disorder, congenital vitamin K-dependent coagulation factors deficiency, hemorrhagic disease due to alpha-1-antitrypsin Pittsburgh mutation, multiple sclerosis-ichthyosis-factor VIII deficiency syndrome, congenital factor XIII deficiency, congenital fibrinogen deficiency, combined deficiency of factor V and factor VIII, acquired hemophilia, fetal and neonatal alloimmune thrombocytopenia, hereditary von Willebrand disease, acquired von willebrand syndrome, prothrombin deficiency, hemophilia B leyden
Subtypes (4): severe hemophilia B, moderately severe hemophilia B, mild hemophilia B, symptomatic form of hemophilia B in female carriers
Genetics & variants
GWAS landscape
No GWAS associations recorded — common-variant (GWAS) studies don’t cover this disease (typical for Mendelian / rare diseases). See the curated gene cohort and Mendelian overlap below.
Variant details and genetic-evidence tiers
ClinVar germline variants
600 retrieved; paginated sample, class counts are floors:
186 pathogenic, 173 likely benign, 88 likely pathogenic, 67 uncertain significance, 36 benign, 29 pathogenic/likely pathogenic, 14 conflicting classifications of pathogenicity, 6 benign/likely benign, 1 benign; association
| ClinVar | Variant (HGVS) | Gene | Classification | Review |
|---|---|---|---|---|
| 665638 | NC_000023.10:g.(?138612860)(139587225_?)del | ATP11C | Pathogenic | criteria provided, single submitter |
| 10098 | NM_000132.4(F8):c.6683G>A (p.Arg2228Gln) | F8 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 10111 | NM_000132.4(F8):c.1172G>A (p.Arg391His) | F8 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 10126 | NM_000132.4(F8):c.6977G>A (p.Arg2326Gln) | F8 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 10177 | NM_000132.4(F8):c.541G>A (p.Val181Met) | F8 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 10196 | NM_000132.4(F8):c.935T>C (p.Phe312Ser) | F8 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 10217 | NM_000132.4(F8):c.1492G>A (p.Gly498Arg) | F8 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 10222 | NM_000132.4(F8):c.1636C>T (p.Arg546Trp) | F8 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 10232 | NM_000132.4(F8):c.1804C>T (p.Arg602Ter) | F8 | Pathogenic | reviewed by expert panel |
| 10236 | NM_000132.4(F8):c.1834C>T (p.Arg612Cys) | F8 | Pathogenic | reviewed by expert panel |
| 10245 | NM_000132.4(F8):c.2149C>T (p.Arg717Trp) | F8 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 10246 | NM_000132.4(F8):c.2167G>A (p.Ala723Thr) | F8 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 10253 | NM_000132.4(F8):c.3637del (p.Ile1213fs) | F8 | Pathogenic | reviewed by expert panel |
| 10319 | NM_000132.4(F8):c.6533G>A (p.Arg2178His) | F8 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 10327 | NM_000132.4(F8):c.6744G>T (p.Trp2248Cys) | F8 | Pathogenic | reviewed by expert panel |
| 10332 | NM_000132.4(F8):c.6956C>T (p.Pro2319Leu) | F8 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 439683 | NM_000132.4(F8):c.6089G>A (p.Ser2030Asn) | F8 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 618098 | NM_000132.4(F8):c.5954G>A (p.Arg1985Gln) | F8 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 618104 | NM_000132.4(F8):c.1094A>G (p.Tyr365Cys) | F8 | Pathogenic | reviewed by expert panel |
| 626933 | NM_000132.4(F8):c.6547A>G (p.Met2183Val) | F8 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 626935 | NM_000132.4(F8):c.6686T>C (p.Leu2229Pro) | F8 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 626992 | NM_000132.4(F8):c.1364T>G (p.Phe455Cys) | F8 | Pathogenic | criteria provided, single submitter |
| 627033 | NM_000132.4(F8):c.2043G>C (p.Met681Ile) | F8 | Pathogenic | criteria provided, single submitter |
| 627109 | NM_000132.4(F8):c.6434T>G (p.Phe2145Cys) | F8 | Pathogenic | criteria provided, single submitter |
| 627121 | NM_000132.4(F8):c.6920A>C (p.Asp2307Ala) | F8 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 627165 | NM_000132.4(F8):c.979C>G (p.Leu327Val) | F8 | Pathogenic | reviewed by expert panel |
| 627191 | NM_000132.4(F8):c.1020A>C (p.Glu340Asp) | F8 | Pathogenic | criteria provided, single submitter |
| 627254 | NM_000132.4(F8):c.1621A>T (p.Thr541Ser) | F8 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 627259 | NM_000132.4(F8):c.1804C>G (p.Arg602Gly) | F8 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 627340 | NM_000132.4(F8):c.5918A>T (p.His1973Leu) | F8 | Pathogenic | criteria provided, single submitter |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 7 · Orphanet: 8 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
GenCC gene–disease validity (cohort genes)
the Disease column is the GenCC-asserted condition — a cohort gene’s strongest validity may be for a related predisposition syndrome.
| Gene | Classification | Inheritance | Disease | Records |
|---|---|---|---|---|
| F9 | Strong | X-linked | hemophilia B | 7 |
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|---|---|
| F9 | Orphanet:169793 | Severe hemophilia B |
| F9 | Orphanet:169796 | Moderate hemophilia B |
| F9 | Orphanet:169799 | Mild hemophilia B |
| F9 | Orphanet:177929 | Bleeding disorder in hemophilia B carriers |
| F8 | Orphanet:169802 | Severe hemophilia A |
| F8 | Orphanet:169805 | Moderate hemophilia A |
| F8 | Orphanet:169808 | Mild hemophilia A |
| F8 | Orphanet:177926 | Bleeding disorder in hemophilia A carriers |
Cohort genes → proteins
3 cohort genes, 3 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|---|
| multi_evidence | 3 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|---|---|---|---|---|
| F9 | HGNC:3551 | ENSG00000101981 | P00740 | Coagulation factor IX | gencc,clinvar |
| ATP11C | HGNC:13554 | ENSG00000101974 | Q8NB49 | Phospholipid-transporting ATPase IG | clinvar |
| F8 | HGNC:3546 | ENSG00000185010 | P00451 | Coagulation factor VIII | clinvar |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|---|---|
| F9 | Coagulation factor IX | Factor IX is a vitamin K-dependent plasma protein that participates in the intrinsic pathway of blood coagulation by converting factor X to its active form in the presence of Ca(2+) ions, phospholipids, and factor VIIIa. |
| ATP11C | Phospholipid-transporting ATPase IG | Catalytic component of a P4-ATPase flippase complex which catalyzes the hydrolysis of ATP coupled to the transport of aminophospholipids, phosphatidylserines (PS) and phosphatidylethanolamines (PE), from the outer to the inner leaflet of t… |
| F8 | Coagulation factor VIII | Factor VIII, along with calcium and phospholipid, acts as a cofactor for F9/factor IXa when it converts F10/factor X to the activated form, factor Xa. |
Protein-family classification
Druggable: 1 · Difficult: 1 · Unknown: 1 · Druggable fraction: 0.33
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|---|---|---|
| Protease | 1 | 12.2× | 0.239 |
| Transcription factor | 1 | 2.8× | 0.482 |
| Other/Unknown | 1 | 0.6× | 0.914 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|---|---|---|---|
| F9 | Protease | yes | 3.4.21.22 | EGF-type_Asp/Asn_hydroxyl_site, GLA_domain, EGF |
| ATP11C | Transcription factor | no | 7.6.2.1 | P_typ_ATPase, P-type_ATPase_IV, ATPase_P-typ_transduc_dom_A_sf |
| F8 | Other/Unknown | no | FA58C, Cupredoxin, Galactose-bd-like_sf |
Expression context
Cohort genes with no expression data: 0.
3 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 0 |
| broad (>20) | 3 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|---|
| liver | 1 |
| right lobe of liver | 1 |
| secondary oocyte | 1 |
| calcaneal tendon | 1 |
| male germ line stem cell (sensu Vertebrata) in testis | 1 |
| seminal vesicle | 1 |
| heart right ventricle | 1 |
| left ventricle myocardium | 1 |
| myocardium | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|---|---|---|---|
| F9 | 45 | tissue_specific | marker | right lobe of liver, liver, secondary oocyte |
| ATP11C | 250 | ubiquitous | marker | seminal vesicle, calcaneal tendon, male germ line stem cell (sensu Vertebrata) in testis |
| F8 | 266 | broad | marker | left ventricle myocardium, heart right ventricle, myocardium |
Protein interactions among cohort
Intra-cohort edges: 2.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|---|
| F8 | 1,900 |
| ATP11C | 1,740 |
| F9 | 1,451 |
Intra-cohort edges
| A | B | Sources |
|---|---|---|
| ATP11C | F9 | string_interaction |
| F8 | F9 | intact, string_interaction |
Structural data
PDB: 3 · AlphaFold-only: 0 · No structure: 0
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|---|---|
| F9 | P00740 | 56 |
| F8 | P00451 | 25 |
| ATP11C | Q8NB49 | 13 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 27. Enrichment computed across 3 evidence-associated genes (3 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 3 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| Defective factor IX causes thrombophilia | 2 | 2537.8× | 1e-06 | F9, F8 |
| Defective cofactor function of FVIIIa variant | 2 | 2537.8× | 1e-06 | F9, F8 |
| Defective F9 variant does not activate FX | 2 | 2537.8× | 1e-06 | F9, F8 |
| Amplification and propagation of coagulation cascade | 2 | 423.0× | 5e-05 | F9, F8 |
| Initiation of coagulation cascade | 2 | 317.2× | 7e-05 | F9, F8 |
| Regulation of clotting cascade | 2 | 155.4× | 2e-04 | F9, F8 |
| Defective F8 accelerates dissociation of the A2 domain | 1 | 3806.7× | 7e-04 | F8 |
| Defective F8 binding to the cell membrane | 1 | 3806.7× | 7e-04 | F8 |
| Defective F8 secretion | 1 | 3806.7× | 7e-04 | F8 |
| Defective F9 secretion | 1 | 3806.7× | 7e-04 | F9 |
| Defective F8 binding to von Willebrand factor | 1 | 1903.3× | 0.001 | F8 |
| Defective gamma-carboxylation of F9 | 1 | 1903.3× | 0.001 | F9 |
| Defective F8 cleavage by thrombin | 1 | 1268.9× | 0.002 | F8 |
| Defective F8 sulfation at Y1699 | 1 | 1268.9× | 0.002 | F8 |
| Defective F9 activation | 1 | 634.4× | 0.003 | F9 |
| Transport of gamma-carboxylated protein precursors from the endoplasmic reticulum to the Golgi apparatus | 1 | 423.0× | 0.004 | F9 |
| Gamma-carboxylation of protein precursors | 1 | 380.7× | 0.004 | F9 |
| Removal of aminoterminal propeptides from gamma-carboxylated proteins | 1 | 380.7× | 0.004 | F9 |
| FXIIa, PKa-dependent activation of coagulation pathway | 1 | 380.7× | 0.004 | F9 |
| Protein hydroxylation | 1 | 181.3× | 0.007 | F9 |
| Gamma carboxylation, hypusinylation, hydroxylation, and arylsulfatase activation | 1 | 141.0× | 0.009 | F8 |
| Cargo concentration in the ER | 1 | 112.0× | 0.011 | F8 |
| Ion transport by P-type ATPases | 1 | 69.2× | 0.017 | ATP11C |
| COPII-mediated vesicle transport | 1 | 54.4× | 0.021 | F8 |
| Ion channel transport | 1 | 32.0× | 0.033 | ATP11C |
| Platelet degranulation | 1 | 29.3× | 0.035 | F8 |
| Transport of small molecules | 1 | 8.4× | 0.115 | ATP11C |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 3 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| blood coagulation | 2 | 115.8× | 7e-04 | F9, F8 |
| blood coagulation, intrinsic pathway | 1 | 702.2× | 0.005 | F8 |
| zymogen activation | 1 | 224.7× | 0.008 | F9 |
| phospholipid translocation | 1 | 208.1× | 0.008 | ATP11C |
| acute-phase response | 1 | 140.4× | 0.010 | F8 |
| monoatomic ion transmembrane transport | 1 | 69.3× | 0.017 | ATP11C |
| proteolysis | 1 | 11.4× | 0.085 | F9 |
Therapeutics
Drugs indicated for this disease
10 approved, 4 in late-stage (phase 3) trials. Disease-direct ChEMBL indications, not inferred from the associated-gene cohort below.
| Drug | Development status |
|---|---|
| Albutrepenonacog Alfa | Approved (phase 4) |
| Coagulation Factor Ix Human | Approved (phase 4) |
| Coagulation Factor Ix Recombinant Human | Approved (phase 4) |
| Eftrenonacog Alfa | Approved (phase 4) |
| Eptacog Alfa (Activated) | Approved (phase 4) |
| Eptacog Beta (Activated) | Approved (phase 4) |
| Etranacogene Dezaparvovec | Approved (phase 4) |
| Fidanacogene Elaparvovec | Approved (phase 4) |
| Marstacimab | Approved (phase 4) |
| Nonacog Beta Pegol | Approved (phase 4) |
| Anti-Inhibitor Coagulant Complex | Phase 3 (in late-stage trials) |
| Concizumab | Phase 3 (in late-stage trials) |
| Fitusiran | Phase 3 (in late-stage trials) |
| Trenonacog Alfa | Phase 3 (in late-stage trials) |
Earlier-phase candidates (phase 2, investigational — efficacy not yet established): Ataluren, Vatreptacog Alfa (Activated).
Drug target analysis
Approved (phase 4): 0 · Phase ≥3: 0 · Phased (≥1): 1 · Undrugged: 2
Druggability breadth: 2 of 3 evidence-associated genes (67%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|---|---|
| F9 | 2 | 2 |
| ATP11C | 0 | 0 |
| F8 | 0 | 0 |
Drugs targeting cohort genes (top 30)
| Molecule | Max phase | Targets in cohort |
|---|---|---|
| LETAXABAN | 2 | F9 |
| RAZAXABAN | 2 | F9 |
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 2.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|---|---|
| F9 | 108 | Binding:107, ADMET:1 |
| F8 | 8 | Binding:8 |
Cohort enzymes (BRENDA EC)
| Symbol | EC numbers | Names |
|---|---|---|
| F9 | 3.4.21.22 | coagulation factor IXa |
| ATP11C | 7.6.2.1 | P-type phospholipid transporter |
Cohort genes with high screening signal
≥100 ChEMBL assays — a studied-ness signal; see Therapeutics for approved-drug status.
| Symbol | ChEMBL assays |
|---|---|
| F9 | 108 |
Pharmacogenomics
Cohort genes with a PharmGKB record: 3; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Chemical tractability of cohort targets
2 approved/phased compounds have measured bioactivity against a cohort gene (and aren’t yet in disease-level trials). This is a research / tractability signal, NOT a therapeutic recommendation — a bioactivity row often reflects off-target or screening binding (e.g. promiscuous kinase inhibitors against a cohort kinase), implying no disease mechanism.
| Compound | Max phase | Cohort target (bioactivity) |
|---|---|---|
| LETAXABAN | 2 | F9 |
| RAZAXABAN | 2 | F9 |
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|---|---|---|
| A | Approved (phase 4 drug) | 0 | |
| B | Phased (≥1) drug, not yet approved | 1 | F9 |
| C | Druggable family + PDB, no drug | 0 | |
| D | Druggable family + AlphaFold only, no drug | 0 | |
| E | Difficult family or no structure, no drug | 2 | ATP11C, F8 |
Undrugged target profiles
2 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
| Symbol | ChEMBL assays | Drugged partners (top 3) |
|---|---|---|
| ATP11C | 0 | F9 |
| F8 | 8 | F9 |
Clinical trials & evidence
Clinical trials
Clinical trials: 170.
Phase distribution (across all retrieved trials)
| Phase | Trials |
|---|---|
| Not specified | 82 |
| PHASE3 | 33 |
| PHASE1/PHASE2 | 17 |
| PHASE1 | 16 |
| PHASE4 | 9 |
| PHASE2 | 8 |
| PHASE2/PHASE3 | 4 |
| EARLY_PHASE1 | 1 |
Top trials by phase / activity
| NCT | Phase | Status | Title |
|---|---|---|---|
| NCT00139828 | PHASE4 | COMPLETED | Post Marketing Study in Haemophilia B Patients Using Nonafact® (Human Coagulation Factor IX) |
| NCT00581126 | PHASE4 | COMPLETED | Study Evaluating BENEFIX in Previously Treated Patients With Hemophilia B |
| NCT00749476 | PHASE4 | COMPLETED | Study Evaluating BeneFIX in Patients With Haemophilia B, Previously Treated With Plasma Derived Factor IX |
| NCT01128881 | PHASE4 | COMPLETED | IMMUNINE Pre-Treatment Study |
| NCT01748201 | PHASE4 | COMPLETED | Viscosupplementation in Patients With Hemophilic Arthropathy |
| NCT02336178 | PHASE4 | COMPLETED | Safety and Efficacy of Benefix in Patients With Hemophilia B in Usual Care Settings in China |
| NCT03565237 | PHASE4 | COMPLETED | RIXUBIS PMS India (RIXUBIS PMS) |
| NCT04286412 | PHASE4 | COMPLETED | Nonacog Alfa Prophylaxis And Treatment Of Bleeding Episodes In Previously Treated Patients With Hemophilia B |
| NCT05856266 | PHASE4 | TERMINATED | An 18-month Low-interventional Study to Assess Joint Health in Haemophilia A and B Patients on Prophylaxis With Efmoroctocog Alfa or Eftrenonacog Alfa |
| NCT03861273 | PHASE3 | ACTIVE_NOT_RECRUITING | A Study to Evaluate the Efficacy and Safety of Factor IX Gene Therapy With PF-06838435 in Adult Males With Moderately Severe to Severe Hemophilia B |
| NCT05145127 | PHASE3 | RECRUITING | Open-Label Extension Study of Marstacimab in Hemophilia Participants With or Without Inhibitors |
| NCT05203679 | PHASE2/PHASE3 | ACTIVE_NOT_RECRUITING | Evaluation of the Safety and Efficacy of Hemophilia B Gene Therapy Drug |
| NCT05568719 | PHASE3 | RECRUITING | Safety and Effectiveness of Giroctocogene Fitelparvovec or Fidanacogene Elaparvovec in Patients With Hemophilia A or B Respectively |
| NCT05611801 | PHASE3 | RECRUITING | A Clinical Trial of Study Medicine (Marstacimab) in Pediatric Patients With Hemophilia A or Hemophilia B |
| NCT06003387 | PHASE3 | RECRUITING | Efficacy and Safety of CSL222 (Etranacogene Dezaparvovec) Gene Therapy in Adults With Hemophilia B With Pretreatment Adeno-associated Virus Serotype 5 (AAV5) Neutralizing Antibodies (Nabs) |
| NCT06399289 | PHASE3 | ACTIVE_NOT_RECRUITING | Recombinant Fusion Protein Linking Coagulation Factor IX With Albumin (rIX-FP) in Chinese Subjects With Hemophilia B Previously Treated With FIX Therapy |
| NCT06700096 | PHASE3 | RECRUITING | An Open-Label, Comparative Study of the Efficacy, Safety and Pharmacodynamics of Single Dose of ANB-002 in Patients With Hemophilia B |
| NCT07080905 | PHASE3 | RECRUITING | Phase 3, Open-label, Single-dose Study of CSL222 in Adolescent Male Subjects (≥ 12 to < 18 Years of Age) With Severe or Moderately Severe Hemophilia B |
| NCT00037557 | PHASE3 | COMPLETED | Study Evaluating rFIX; BeneFIX in Severe Hemophilia B |
| NCT00093171 | PHASE3 | COMPLETED | Study Evaluating rFIX; BeneFIX® in Hemophilia B |
| NCT00093210 | PHASE3 | COMPLETED | Study Evaluating of Recombinant Human Factor IX (BeneFIX) and a New Formulation of BeneFIX (rFIX-R) in Moderate to Severe Hemophilia B |
| NCT00364182 | PHASE3 | COMPLETED | Study Comparing On-Demand Treatment With Two Prophylaxis Regimens Of BeneFIX In Patients With Severe Hemophilia B |
| NCT00768287 | PHASE2/PHASE3 | COMPLETED | Study of Recombinant Factor IX Product, IB1001, in Subjects With Hemophilia B |
| NCT00851721 | PHASE3 | COMPLETED | Efficacy and Safety Study of Prophylactic Versus On-Demand Treatment With Feiba NF in Subjects With Hemophilia A or B and a High Titer Inhibitor |
| NCT00866606 | PHASE3 | COMPLETED | Study Evaluating On-Demand Treatment With BeneFIX In Chinese Subjects |
| NCT01174446 | PHASE3 | COMPLETED | Pivotal Study (Pharmacokinetics, Efficacy, Safety) of BAX 326 (rFIX) in Hemophilia B Patients |
| NCT01271868 | PHASE3 | TERMINATED | Study of Recombinant Factor IX Product, IB1001, in Previously Treated Pediatric Subjects With Hemophilia B |
| NCT01286779 | PHASE3 | COMPLETED | BAX 326 (rFIX) Continuation Study |
| NCT01335061 | PHASE3 | COMPLETED | Study To Compare On-Demand Treatment To A Prophylaxis Regimen Of BeneFIX In Subjects With Moderately Severe to Severe Hemophilia B |
| NCT01440946 | PHASE3 | COMPLETED | Study of Recombinant Coagulation Factor IX Fc Fusion Protein, BIIB029, in Previously Treated Pediatric Participants With Hemophilia B |
| NCT01488994 | PHASE2/PHASE3 | COMPLETED | BAX 326 Pediatric Study |
| NCT01496274 | PHASE2/PHASE3 | COMPLETED | A Safety and Efficacy Study of a Recombinant Fusion Protein Linking Coagulation Factor IX With Albumin (rIX-FP) in Patients With Hemophilia B |
| NCT01507896 | PHASE3 | COMPLETED | BAX 326 Surgery Study in Hemophilia B Patients |
| NCT01662531 | PHASE3 | COMPLETED | A Safety, Efficacy and Pharmacokinetics Study of a Recombinant Fusion Protein Linking Coagulation Factor IX With Albumin (rIX-FP) in Children With Hemophilia B |
| NCT01757405 | PHASE3 | COMPLETED | Recombinant Factor VIIa BI (rFVIIa BI) Treatment of Acute Bleeding Episodes Per an On-demand Regimen |
| NCT02048111 | PHASE3 | WITHDRAWN | Study of Recombinant Factor IX Product, IB1001, in Previously Treated Subjects With Hemophilia B |
| NCT02053792 | PHASE3 | COMPLETED | A Safety and Efficacy Extension Study of a Recombinant Fusion Protein Linking Coagulation Factor IX With Albumin (rIX-FP) in Patients With Hemophilia B |
| NCT02234310 | PHASE3 | COMPLETED | Study to Determine the Safety and Efficacy of rFIXFc in Previously Untreated Males With Severe Hemophilia B |
| NCT03417102 | PHASE3 | COMPLETED | A Study of Fitusiran (ALN-AT3SC) in Severe Hemophilia A and B Patients With Inhibitors |
| NCT03417245 | PHASE3 | COMPLETED | A Study of Fitusiran (ALN-AT3SC) in Severe Hemophilia A and B Patients Without Inhibitors |
Drugs tested across these trials (top 30)
| Molecule | Max phase | Trials referencing |
|---|---|---|
| COAGULATION FACTOR IX RECOMBINANT HUMAN | 4 | 14 |
| EFTRENONACOG ALFA | 4 | 5 |
| ETRANACOGENE DEZAPARVOVEC | 4 | 4 |
| LEVACETYLLEUCINE | 4 | 3 |
| MARSTACIMAB | 4 | 3 |
| FIDANACOGENE ELAPARVOVEC | 4 | 2 |
| ATALUREN | 4 | 1 |
| COAGULATION FACTOR IX HUMAN | 4 | 1 |
| SODIUM CHLORIDE | 4 | 1 |
| FITUSIRAN | 3 | 4 |
| TRENONACOG ALFA | 3 | 3 |
| BAY-1093884 | 2 | 1 |
| VERBRINACOGENE SETPARVOVEC | 1 | 3 |