Hereditary hyperekplexia
diseaseOn this page
Also known as congenital stiff man syndromefamilial startle diseasehereditary hyperexplexiahyperekplexiahyperexplexia hereditaryKok diseaseStiff baby syndrome
Summary
Hereditary hyperekplexia (MONDO:0021022) is a disease (an umbrella term covering 5 Mondo subtypes) with 7 cohort genes and 4 clinical trials.
At a glance
- Prevalence: <1 / 1 000 000 (Worldwide) [Orphanet-validated]
- Umbrella term: 5 Mondo subtypes
- Cohort genes: 7
- ClinVar variants: 470
- Phenotypes (HPO): 21
- Clinical trials: 4
Clinical features
Epidemiology
Prevalence records
2 prevalence record(s), Orphanet:
| Type | Class | Value | Geography | Validation |
|---|---|---|---|---|
| Cases/families | 150 | Worldwide | Validated | |
| Point prevalence | <1 / 1 000 000 | Worldwide | Validated |
Signs & symptoms
Clinical features (HPO)
21 HPO clinical features (Orphanet curated; top 21 by frequency):
| HPO ID | Term | Frequency |
|---|---|---|
| HP:0001251 | Ataxia | Very frequent (80-99%) |
| HP:0001257 | Spasticity | Very frequent (80-99%) |
| HP:0001276 | Hypertonia | Very frequent (80-99%) |
| HP:0001336 | Myoclonus | Very frequent (80-99%) |
| HP:0001347 | Hyperreflexia | Very frequent (80-99%) |
| HP:0001387 | Joint stiffness | Very frequent (80-99%) |
| HP:0002020 | Gastroesophageal reflux | Very frequent (80-99%) |
| HP:0002036 | Hiatus hernia | Very frequent (80-99%) |
| HP:0002063 | Rigidity | Very frequent (80-99%) |
| HP:0002380 | Fasciculations | Very frequent (80-99%) |
| HP:0003552 | Muscle stiffness | Very frequent (80-99%) |
| HP:0100022 | Abnormality of movement | Very frequent (80-99%) |
| HP:0100633 | Esophagitis | Very frequent (80-99%) |
| HP:0001288 | Gait disturbance | Frequent (30-79%) |
| HP:0001537 | Umbilical hernia | Frequent (30-79%) |
| HP:0002360 | Sleep abnormality | Frequent (30-79%) |
| HP:0100790 | Hernia | Frequent (30-79%) |
| HP:0001249 | Intellectual disability | Occasional (5-29%) |
| HP:0001250 | Seizure | Occasional (5-29%) |
| HP:0001373 | Joint dislocation | Occasional (5-29%) |
| HP:0002827 | Hip dislocation | Occasional (5-29%) |
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | hereditary hyperekplexia |
| Mondo ID | MONDO:0021022 |
| OMIM | 149400 |
| Orphanet | 3197 |
| DOID | DOID:0060695 |
| ICD-11 | 988250063 |
| SNOMED CT | 724351008 |
| UMLS | C4084968 |
| MedGen | 904633 |
| GARD | 0003129 |
| Is cancer (heuristic) | no |
Also known as: congenital stiff man syndrome · familial startle disease · hereditary hyperekplexia · hereditary hyperexplexia · hyperekplexia · hyperexplexia hereditary · Kok disease · Stiff baby syndrome
Data availability: 470 ClinVar variants · 5 GenCC gene-disease records.
Disease family
An umbrella term covering 5 Mondo subtypes.
Classification path: disease › human disease › disease by body system or component › nervous system disorder › movement disorder › hyperekplexia › hereditary hyperekplexia
Related subtypes (1): sporadic hyperekplexia
Subtypes (5): hyperekplexia 1, developmental and epileptic encephalopathy, 8, hyperekplexia 3, hyperekplexia 2, hyperekplexia 4
Genetics & variants
GWAS landscape
No GWAS associations recorded — common-variant (GWAS) studies don’t cover this disease (typical for Mendelian / rare diseases). See the curated gene cohort and Mendelian overlap below.
Variant details and genetic-evidence tiers
ClinVar germline variants
470 retrieved; paginated sample, class counts are floors:
214 uncertain significance, 160 likely benign, 33 pathogenic, 24 conflicting classifications of pathogenicity, 12 benign/likely benign, 10 likely pathogenic, 9 pathogenic/likely pathogenic, 8 benign
| ClinVar | Variant (HGVS) | Gene | Classification | Review |
|---|---|---|---|---|
| 1070761 | NM_000171.4(GLRA1):c.634_635del (p.Leu212fs) | GLRA1 | Pathogenic | criteria provided, single submitter |
| 1076337 | NC_000005.9:g.(?151266262)(151266369_?)del | GLRA1 | Pathogenic | criteria provided, single submitter |
| 1076338 | NC_000005.9:g.(?151239326)(151239589_?)del | GLRA1 | Pathogenic | criteria provided, single submitter |
| 1324483 | NM_000171.4(GLRA1):c.736C>T (p.Arg246Trp) | GLRA1 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 1373698 | NM_000171.4(GLRA1):c.376del (p.Leu126fs) | GLRA1 | Pathogenic | criteria provided, single submitter |
| 1431352 | NM_000171.4(GLRA1):c.378del (p.Phe127fs) | GLRA1 | Pathogenic | criteria provided, single submitter |
| 1436466 | NM_000171.4(GLRA1):c.1101T>A (p.Tyr367Ter) | GLRA1 | Pathogenic | criteria provided, single submitter |
| 1455169 | NM_000171.4(GLRA1):c.186dup (p.Pro63fs) | GLRA1 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 1459155 | NM_000171.4(GLRA1):c.895C>T (p.Arg299Ter) | GLRA1 | Pathogenic | criteria provided, single submitter |
| 16060 | NM_000171.4(GLRA1):c.896G>T (p.Arg299Leu) | GLRA1 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 16061 | NM_000171.4(GLRA1):c.896G>A (p.Arg299Gln) | GLRA1 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 16063 | NM_000171.4(GLRA1):c.920A>G (p.Tyr307Cys) | GLRA1 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 16067 | NM_000171.4(GLRA1):c.298del (p.Arg100fs) | GLRA1 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 16069 | NM_000171.4(GLRA1):c.690C>A (p.Tyr230Ter) | GLRA1 | Pathogenic | criteria provided, single submitter |
| 16073 | NM_000171.4(GLRA1):c.971C>A (p.Ser324Ter) | GLRA1 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 2014746 | NM_000171.4(GLRA1):c.258_260del (p.Tyr86_Arg87delinsTer) | GLRA1 | Pathogenic | criteria provided, single submitter |
| 2045456 | NM_000171.4(GLRA1):c.381dup (p.Phe128fs) | GLRA1 | Pathogenic | criteria provided, single submitter |
| 2136350 | NM_000171.4(GLRA1):c.278G>T (p.Arg93Leu) | GLRA1 | Pathogenic | criteria provided, single submitter |
| 2162119 | NM_000171.4(GLRA1):c.537dup (p.Cys180fs) | GLRA1 | Pathogenic | criteria provided, single submitter |
| 2196359 | NM_000171.4(GLRA1):c.298C>T (p.Arg100Cys) | GLRA1 | Pathogenic | criteria provided, single submitter |
| 225379 | NM_000171.4(GLRA1):c.277C>T (p.Arg93Trp) | GLRA1 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 2422534 | NC_000005.9:g.(?151230931)(151304110_?)del | GLRA1 | Pathogenic | criteria provided, single submitter |
| 2422535 | NC_000005.9:g.(?151304035)(151304110_?)del | GLRA1 | Pathogenic | criteria provided, single submitter |
| 242679 | NM_000171.4(GLRA1):c.839G>A (p.Arg280His) | GLRA1 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 242680 | NM_000171.4(GLRA1):c.1259G>A (p.Arg420His) | GLRA1 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 2756322 | NM_000171.4(GLRA1):c.725del (p.Phe242fs) | GLRA1 | Pathogenic | criteria provided, single submitter |
| 2778873 | NM_000171.4(GLRA1):c.99dup (p.Lys34fs) | GLRA1 | Pathogenic | criteria provided, single submitter |
| 2800421 | NM_000171.4(GLRA1):c.1059+1G>A | GLRA1 | Pathogenic | criteria provided, single submitter |
| 2850498 | NM_000171.4(GLRA1):c.365G>A (p.Trp122Ter) | GLRA1 | Pathogenic | criteria provided, single submitter |
| 3013590 | NM_000171.4(GLRA1):c.415del (p.Ile139fs) | GLRA1 | Pathogenic | criteria provided, single submitter |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 39 · Orphanet: 7 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
GenCC gene–disease validity (cohort genes)
the Disease column is the GenCC-asserted condition — a cohort gene’s strongest validity may be for a related predisposition syndrome.
| Gene | Classification | Inheritance | Disease | Records |
|---|---|---|---|---|
| GLRA1 | Definitive | Autosomal dominant | hyperekplexia 1 | 7 |
| GLRB | Definitive | Autosomal recessive | hyperekplexia 2 | 6 |
| SLC6A2 | Definitive | Autosomal recessive | hyperekplexia 3 | 9 |
| SLC6A5 | Definitive | Autosomal recessive | hyperekplexia 3 | 6 |
| ATAD1 | Strong | Autosomal recessive | hyperekplexia 4 | 4 |
| GPHN | Supportive | Autosomal dominant | hereditary hyperekplexia | 7 |
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|---|---|
| GLRA1 | Orphanet:3197 | Hereditary hyperekplexia |
| SLC6A2 | Orphanet:443236 | Postural orthostatic tachycardia syndrome due to NET deficiency |
| SLC6A5 | Orphanet:3197 | Hereditary hyperekplexia |
| GPHN | Orphanet:308400 | Sulfite oxidase deficiency due to molybdenum cofactor deficiency type C |
| GPHN | Orphanet:3197 | Hereditary hyperekplexia |
| ATAD1 | Orphanet:3197 | Hereditary hyperekplexia |
| GLRB | Orphanet:3197 | Hereditary hyperekplexia |
Cohort genes → proteins
7 cohort genes, 7 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|---|
| multi_evidence | 7 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|---|---|---|---|---|
| GLRA1 | HGNC:4326 | ENSG00000145888 | P23415 | Glycine receptor subunit alpha-1 | gencc,clinvar |
| SLC6A2 | HGNC:11048 | ENSG00000103546 | P23975 | Sodium-dependent noradrenaline transporter | gencc |
| SLC6A5 | HGNC:11051 | ENSG00000165970 | Q9Y345 | Sodium- and chloride-dependent glycine transporter 2 | gencc |
| GPHN | HGNC:15465 | ENSG00000171723 | Q9NQX3 | Gephyrin | gencc |
| ATAD1 | HGNC:25903 | ENSG00000138138 | Q8NBU5 | Outer mitochondrial transmembrane helix translocase | gencc |
| GLRB | HGNC:4329 | ENSG00000109738 | P48167 | Glycine receptor subunit beta | gencc |
| ATOX1 | HGNC:798 | ENSG00000177556 | O00244 | Copper transport protein ATOX1 | clinvar |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|---|---|
| GLRA1 | Glycine receptor subunit alpha-1 | Subunit of heteromeric glycine-gated chloride channels. |
| SLC6A2 | Sodium-dependent noradrenaline transporter | Mediates sodium- and chloride-dependent transport of norepinephrine (also known as noradrenaline), the primary signaling neurotransmitter in the autonomic sympathetic nervous system. |
| SLC6A5 | Sodium- and chloride-dependent glycine transporter 2 | Sodium- and chloride-dependent glycine transporter. |
| GPHN | Gephyrin | Microtubule-associated protein involved in membrane protein-cytoskeleton interactions. |
| ATAD1 | Outer mitochondrial transmembrane helix translocase | Outer mitochondrial translocase required to remove mislocalized tail-anchored transmembrane proteins on mitochondria. |
| GLRB | Glycine receptor subunit beta | Subunit of heteromeric glycine-gated chloride channels. |
| ATOX1 | Copper transport protein ATOX1 | Binds and deliver cytosolic copper to the copper ATPase proteins. |
Protein-family classification
Druggable: 0 · Difficult: 0 · Unknown: 7 · Druggable fraction: 0.0
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|---|---|---|
| Other/Unknown | 7 | 1.8× | 0.017 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|---|---|---|---|
| GLRA1 | Other/Unknown | no | GABAA/Glycine_rcpt, Neurotrans-gated_channel_TM, Neur_channel | |
| SLC6A2 | Other/Unknown | no | Na/ntran_symport, Na/ntran_symport_noradrenaline, SNS_sf | |
| SLC6A5 | Other/Unknown | no | Na/ntran_symport, SNS_sf | |
| GPHN | Other/Unknown | no | MoaB/Mog_dom, MoeA_linker/N, MoeA_C_domain_IV | |
| ATAD1 | Other/Unknown | no | AAA+_ATPase, ATPase_AAA_core, ATPase_AAA_CS | |
| GLRB | Other/Unknown | no | Neurotrans-gated_channel_TM, Neur_channel, Neur_chan_lig-bd | |
| ATOX1 | Other/Unknown | no | HMA_dom, Heavy-metal-associated_CS, HMA_dom_sf |
Expression context
Cohort genes with no expression data: 0.
7 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 0 |
| broad (>20) | 7 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|---|
| islet of Langerhans | 2 |
| male germ line stem cell (sensu Vertebrata) in testis | 2 |
| pancreatic ductal cell | 1 |
| buccal mucosa cell | 1 |
| decidua | 1 |
| placenta | 1 |
| oocyte | 1 |
| secondary oocyte | 1 |
| cerebellar cortex | 1 |
| cerebellar hemisphere | 1 |
| right hemisphere of cerebellum | 1 |
| left testis | 1 |
| right testis | 1 |
| Brodmann (1909) area 10 | 1 |
| frontal pole | 1 |
| middle frontal gyrus | 1 |
| C1 segment of cervical spinal cord | 1 |
| right adrenal gland | 1 |
| right lobe of liver | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|---|---|---|---|
| GLRA1 | 39 | tissue_specific | marker | islet of Langerhans, male germ line stem cell (sensu Vertebrata) in testis, pancreatic ductal cell |
| SLC6A2 | 121 | ubiquitous | marker | placenta, buccal mucosa cell, decidua |
| SLC6A5 | 36 | ubiquitous | marker | secondary oocyte, male germ line stem cell (sensu Vertebrata) in testis, oocyte |
| GPHN | 270 | ubiquitous | marker | cerebellar cortex, cerebellar hemisphere, right hemisphere of cerebellum |
| ATAD1 | 252 | ubiquitous | marker | right testis, left testis, islet of Langerhans |
| GLRB | 236 | ubiquitous | marker | frontal pole, Brodmann (1909) area 10, middle frontal gyrus |
| ATOX1 | 286 | ubiquitous | marker | C1 segment of cervical spinal cord, right lobe of liver, right adrenal gland |
Protein interactions among cohort
Intra-cohort edges: 7.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|---|
| ATAD1 | 3,099 |
| GPHN | 2,500 |
| ATOX1 | 2,122 |
| GLRB | 1,382 |
| SLC6A5 | 1,314 |
| SLC6A2 | 1,213 |
| GLRA1 | 897 |
Intra-cohort edges
| A | B | Sources |
|---|---|---|
| GLRA1 | GLRB | intact |
| GLRA1 | GPHN | string_interaction |
| GLRA1 | SLC6A5 | string_interaction |
| GLRB | GPHN | biogrid_interaction, string_interaction |
| GLRB | SLC6A2 | string_interaction |
| GLRB | SLC6A5 | string_interaction |
| GPHN | SLC6A5 | string_interaction |
Structural data
PDB: 7 · AlphaFold-only: 0 · No structure: 0
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|---|---|
| SLC6A2 | P23975 | 36 |
| ATOX1 | O00244 | 17 |
| GLRB | P48167 | 12 |
| GLRA1 | P23415 | 9 |
| SLC6A5 | Q9Y345 | 4 |
| ATAD1 | Q8NBU5 | 2 |
| GPHN | Q9NQX3 | 1 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 21. Enrichment computed across 7 evidence-associated genes (7 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 7 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| SLC-mediated transport of neurotransmitters | 2 | 116.5× | 0.003 | SLC6A2, SLC6A5 |
| SLC transporter disorders | 2 | 58.3× | 0.004 | SLC6A2, SLC6A5 |
| R-HSA-425366 | 2 | 51.8× | 0.004 | SLC6A2, SLC6A5 |
| Defective SLC6A5 causes hyperekplexia 3 (HKPX3) | 1 | 815.7× | 0.005 | SLC6A5 |
| Disorders of transmembrane transporters | 2 | 39.8× | 0.005 | SLC6A2, SLC6A5 |
| Defective SLC6A2 causes orthostatic intolerance (OI) | 1 | 407.9× | 0.006 | SLC6A2 |
| Ion influx/efflux at host-pathogen interface | 1 | 407.9× | 0.006 | ATOX1 |
| Neurotransmitter receptors and postsynaptic signal transmission | 2 | 28.6× | 0.006 | GLRA1, GLRB |
| Molybdenum cofactor biosynthesis | 1 | 233.1× | 0.010 | GPHN |
| SLC-mediated transmembrane transport | 2 | 16.9× | 0.012 | SLC6A2, SLC6A5 |
| Class I peroxisomal membrane protein import | 1 | 74.2× | 0.026 | ATAD1 |
| Detoxification of Reactive Oxygen Species | 1 | 42.9× | 0.040 | ATOX1 |
| Antimicrobial peptides | 1 | 32.0× | 0.046 | ATOX1 |
| Transport of small molecules | 2 | 7.2× | 0.046 | SLC6A2, SLC6A5 |
| Protein localization | 1 | 27.2× | 0.051 | ATAD1 |
| Cellular response to chemical stress | 1 | 20.4× | 0.063 | ATOX1 |
| Disease | 2 | 3.7× | 0.117 | SLC6A2, SLC6A5 |
| Cellular responses to stress | 1 | 5.3× | 0.204 | ATOX1 |
| Cellular responses to stimuli | 1 | 4.5× | 0.224 | ATOX1 |
| Innate Immune System | 1 | 3.6× | 0.257 | ATOX1 |
| Immune System | 1 | 1.9× | 0.430 | ATOX1 |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 7 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| synaptic transmission, glycinergic | 3 | 1805.6× | 9e-09 | GLRA1, SLC6A5, GLRB |
| gamma-aminobutyric acid receptor clustering | 2 | 963.0× | 4e-05 | GPHN, GLRB |
| righting reflex | 2 | 535.0× | 1e-04 | GLRA1, GLRB |
| startle response | 2 | 321.0× | 2e-04 | GLRA1, GLRB |
| acrosome reaction | 2 | 253.4× | 3e-04 | GLRA1, GLRB |
| adult walking behavior | 2 | 141.6× | 6e-04 | GLRA1, GLRB |
| chemical synaptic transmission | 3 | 33.1× | 6e-04 | SLC6A2, SLC6A5, GLRB |
| neurotransmitter transport | 2 | 120.4× | 8e-04 | SLC6A2, SLC6A5 |
| glycine receptor clustering | 1 | 2407.4× | 0.002 | GPHN |
| extraction of mislocalized protein from mitochondrial outer membrane | 1 | 2407.4× | 0.002 | ATAD1 |
| chloride transmembrane transport | 2 | 67.8× | 0.002 | GLRA1, GLRB |
| sodium ion transmembrane transport | 2 | 58.0× | 0.002 | SLC6A2, SLC6A5 |
| neuropeptide signaling pathway | 2 | 49.1× | 0.003 | GLRA1, GLRB |
| establishment of synaptic specificity at neuromuscular junction | 1 | 1203.7× | 0.003 | GPHN |
| monoatomic ion transport | 2 | 44.6× | 0.003 | GLRA1, GLRB |
| copper ion export | 1 | 802.5× | 0.004 | ATOX1 |
| Mo-molybdopterin cofactor biosynthetic process | 1 | 343.9× | 0.008 | GPHN |
| negative regulation of transmission of nerve impulse | 1 | 343.9× | 0.008 | GLRA1 |
| glycine import across plasma membrane | 1 | 343.9× | 0.008 | SLC6A5 |
| obsolete norepinephrine transport | 1 | 267.5× | 0.008 | SLC6A2 |
| dopamine uptake involved in synaptic transmission | 1 | 267.5× | 0.008 | SLC6A2 |
| norepinephrine uptake | 1 | 267.5× | 0.008 | SLC6A2 |
| copper ion transport | 1 | 240.7× | 0.008 | ATOX1 |
| negative regulation of synaptic transmission, glutamatergic | 1 | 240.7× | 0.008 | ATAD1 |
| inhibitory postsynaptic potential | 1 | 240.7× | 0.008 | GLRA1 |
| response to metal ion | 1 | 218.9× | 0.008 | GPHN |
| response to alcohol | 1 | 218.9× | 0.008 | GLRA1 |
| positive regulation of acrosome reaction | 1 | 218.9× | 0.008 | GLRA1 |
| visual perception | 2 | 22.7× | 0.008 | GLRA1, GLRB |
| regulation of respiratory gaseous exchange by nervous system process | 1 | 185.2× | 0.010 | GLRA1 |
Therapeutics
Drug target analysis
Approved (phase 4): 2 · Phase ≥3: 2 · Phased (≥1): 2 · Undrugged: 5
Druggability breadth: 4 of 7 evidence-associated genes (57%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Genes with an approved drug
The molecule shown is one approved compound that hits the gene — not necessarily a drug of choice or one indicated for this disease.
| Symbol | Example approved molecule |
|---|---|
| GLRA1 | TELMISARTAN |
| SLC6A2 | CETIRIZINE |
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|---|---|
| SLC6A2 | 471 | 4 |
| GLRA1 | 15 | 4 |
| SLC6A5 | 0 | 0 |
| GPHN | 0 | 0 |
| ATAD1 | 0 | 0 |
| GLRB | 0 | 0 |
| ATOX1 | 0 | 0 |
Drugs targeting cohort genes (top 30)
| Molecule | Max phase | Targets in cohort |
|---|---|---|
| TELMISARTAN | 4 | GLRA1 |
| CHOLECALCIFEROL | 4 | GLRA1 |
| DUTASTERIDE | 4 | GLRA1 |
| CINACALCET | 4 | GLRA1, SLC6A2 |
| ADAPALENE | 4 | GLRA1 |
| PIMOZIDE | 4 | GLRA1, SLC6A2 |
| SULINDAC | 4 | GLRA1 |
| REGORAFENIB | 4 | GLRA1, SLC6A2 |
| ASTEMIZOLE | 4 | GLRA1, SLC6A2 |
| MEFLOQUINE | 4 | GLRA1, SLC6A2 |
| DRONABINOL | 4 | GLRA1 |
| FLUSPIRILENE | 4 | GLRA1, SLC6A2 |
| GLYCINE | 4 | GLRA1 |
| RISPERIDONE | 4 | GLRA1, SLC6A2 |
| CETIRIZINE | 4 | SLC6A2 |
| BEPRIDIL | 4 | SLC6A2 |
| CANDESARTAN CILEXETIL | 4 | SLC6A2 |
| BEXAROTENE | 4 | SLC6A2 |
| CLOTRIMAZOLE | 4 | SLC6A2 |
| AMINOCAPROIC ACID | 4 | SLC6A2 |
| SIMVASTATIN | 4 | SLC6A2 |
| NABUMETONE | 4 | SLC6A2 |
| METAXALONE | 4 | SLC6A2 |
| ACETOPHENAZINE | 4 | SLC6A2 |
| MESORIDAZINE | 4 | SLC6A2 |
| PHENELZINE | 4 | SLC6A2 |
| NIRAPARIB | 4 | SLC6A2 |
| INDACATEROL | 4 | SLC6A2 |
| IMIPRAMINE | 4 | SLC6A2 |
| EPINASTINE | 4 | SLC6A2 |
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 0.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|---|---|
| SLC6A2 | 929 | Binding:885, ADMET:25, Functional:15, Toxicity:3, Unclassified:1 |
| GLRA1 | 59 | Binding:51, Functional:7, Toxicity:1 |
| SLC6A5 | 54 | Binding:50, Functional:4 |
| GLRB | 30 | Binding:29, Toxicity:1 |
Cohort genes with high screening signal
≥100 ChEMBL assays — a studied-ness signal; see Therapeutics for approved-drug status.
| Symbol | ChEMBL assays |
|---|---|
| SLC6A2 | 929 |
Pharmacogenomics
Cohort genes with a PharmGKB record: 7; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Chemical tractability of cohort targets
30 approved/phased compounds have measured bioactivity against a cohort gene (and aren’t yet in disease-level trials). This is a research / tractability signal, NOT a therapeutic recommendation — a bioactivity row often reflects off-target or screening binding (e.g. promiscuous kinase inhibitors against a cohort kinase), implying no disease mechanism.
| Compound | Max phase | Cohort target (bioactivity) |
|---|---|---|
| TELMISARTAN | 4 | GLRA1 |
| CHOLECALCIFEROL | 4 | GLRA1 |
| DUTASTERIDE | 4 | GLRA1 |
| CINACALCET | 4 | GLRA1, SLC6A2 |
| ADAPALENE | 4 | GLRA1 |
| PIMOZIDE | 4 | GLRA1, SLC6A2 |
| SULINDAC | 4 | GLRA1 |
| REGORAFENIB | 4 | GLRA1, SLC6A2 |
| ASTEMIZOLE | 4 | GLRA1, SLC6A2 |
| MEFLOQUINE | 4 | GLRA1, SLC6A2 |
| DRONABINOL | 4 | GLRA1 |
| FLUSPIRILENE | 4 | GLRA1, SLC6A2 |
| GLYCINE | 4 | GLRA1 |
| RISPERIDONE | 4 | GLRA1, SLC6A2 |
| CETIRIZINE | 4 | SLC6A2 |
| BEPRIDIL | 4 | SLC6A2 |
| CANDESARTAN CILEXETIL | 4 | SLC6A2 |
| BEXAROTENE | 4 | SLC6A2 |
| CLOTRIMAZOLE | 4 | SLC6A2 |
| AMINOCAPROIC ACID | 4 | SLC6A2 |
| SIMVASTATIN | 4 | SLC6A2 |
| NABUMETONE | 4 | SLC6A2 |
| METAXALONE | 4 | SLC6A2 |
| ACETOPHENAZINE | 4 | SLC6A2 |
| MESORIDAZINE | 4 | SLC6A2 |
| PHENELZINE | 4 | SLC6A2 |
| NIRAPARIB | 4 | SLC6A2 |
| INDACATEROL | 4 | SLC6A2 |
| IMIPRAMINE | 4 | SLC6A2 |
| EPINASTINE | 4 | SLC6A2 |
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|---|---|---|
| A | Approved (phase 4 drug) | 2 | GLRA1, SLC6A2 |
| B | Phased (≥1) drug, not yet approved | 0 | |
| C | Druggable family + PDB, no drug | 0 | |
| D | Druggable family + AlphaFold only, no drug | 0 | |
| E | Difficult family or no structure, no drug | 5 | SLC6A5, GPHN, ATAD1, GLRB, ATOX1 |
Undrugged target profiles
5 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
| Symbol | ChEMBL assays | Drugged partners (top 3) |
|---|---|---|
| SLC6A5 | 54 | GLRA1 |
| GPHN | 0 | — |
| ATAD1 | 0 | — |
| GLRB | 30 | — |
| ATOX1 | 0 | — |
Clinical trials & evidence
Clinical trials
Clinical trials: 4.
Phase distribution (across all retrieved trials)
| Phase | Trials |
|---|---|
| Not specified | 4 |
Top trials by phase / activity
| NCT | Phase | Status | Title |
|---|---|---|---|
| NCT05652101 | Not specified | RECRUITING | Hyperekplexia : Adaptative Skills and Neurodevelopmental Trajectory |
| NCT01476514 | Not specified | TERMINATED | Effects of Mutations of the Glycine Gene Associated With Hyperekplexia on Central Pain Processing |
| NCT05168969 | Not specified | COMPLETED | Hyperekplexia in Patients With CTNNB1 Mutation |
| NCT05687474 | Not specified | COMPLETED | Baby Detect : Genomic Newborn Screening |