Hyperkalemic periodic paralysis
diseaseOn this page
Also known as adynamia episodica hereditariaadynamia episodica hereditaria with or without myotoniafamilial hyperkalemic periodic paralysisfamilial hyperkalemic periodic paralysis (disorder) [ambiguous]familial hyperPPGamstorp diseaseGamstorp episodic adynamyhyperkalemic periodic paralysis, type 2hyperkalemic PPhyperKPPhyperPPHYPPnormokalemic periodic paralysis, potassium-sensitiveprimary hyperkalemic periodic paralysisprimary hyperPPsodium channel muscle disease
Summary
Hyperkalemic periodic paralysis (MONDO:0008224) is a disease caused by SCN4A (GenCC Definitive), with 5 cohort genes and 3 clinical trials. Top therapeutic interventions include dichlorphenamide and lamotrigine.
At a glance
- Prevalence: 1-9 / 1 000 000 (Europe) [Orphanet-validated]
- Causal gene: SCN4A (GenCC Definitive)
- Cohort genes: 5
- ClinVar variants: 2,046
- Phenotypes (HPO): 29
- Clinical trials: 3
Clinical features
Epidemiology
Prevalence records
3 prevalence record(s), Orphanet:
| Type | Class | Value | Geography | Validation |
|---|---|---|---|---|
| Point prevalence | 1-9 / 1 000 000 | 0.5 | Europe | Validated |
| Point prevalence | 1-9 / 1 000 000 | 0.17 | United Kingdom | Validated |
| Point prevalence | <1 / 1 000 000 | 0.06 | Netherlands | Validated |
Signs & symptoms
Clinical features (HPO)
29 HPO clinical features (Orphanet curated; top 29 by frequency):
| HPO ID | Term | Frequency |
|---|---|---|
| HP:0001315 | Reduced tendon reflexes | Very frequent (80-99%) |
| HP:0003236 | Elevated circulating creatine kinase concentration | Very frequent (80-99%) |
| HP:0003457 | EMG abnormality | Very frequent (80-99%) |
| HP:0003752 | Episodic flaccid weakness | Very frequent (80-99%) |
| HP:0007215 | Periodic hyperkalemic paralysis | Very frequent (80-99%) |
| HP:0100021 | Cerebral palsy | Very frequent (80-99%) |
| HP:0001288 | Gait disturbance | Frequent (30-79%) |
| HP:0002153 | Hyperkalemia | Frequent (30-79%) |
| HP:0002380 | Fasciculations | Frequent (30-79%) |
| HP:0002486 | Myotonia | Frequent (30-79%) |
| HP:0003326 | Myalgia | Frequent (30-79%) |
| HP:0000597 | Ophthalmoparesis | Occasional (5-29%) |
| HP:0001276 | Hypertonia | Occasional (5-29%) |
| HP:0001371 | Flexion contracture | Occasional (5-29%) |
| HP:0001522 | Death in infancy | Occasional (5-29%) |
| HP:0001635 | Congestive heart failure | Occasional (5-29%) |
| HP:0002047 | Malignant hyperthermia | Occasional (5-29%) |
| HP:0002093 | Respiratory insufficiency | Occasional (5-29%) |
| HP:0002607 | Bowel incontinence | Occasional (5-29%) |
| HP:0002900 | Hypokalemia | Occasional (5-29%) |
| HP:0002902 | Hyponatremia | Occasional (5-29%) |
| HP:0003198 | Myopathy | Occasional (5-29%) |
| HP:0003202 | Skeletal muscle atrophy | Occasional (5-29%) |
| HP:0003401 | Paresthesia | Occasional (5-29%) |
| HP:0003712 | Skeletal muscle hypertrophy | Occasional (5-29%) |
| HP:0008872 | Feeding difficulties in infancy | Occasional (5-29%) |
| HP:0011675 | Arrhythmia | Occasional (5-29%) |
| HP:0100613 | Death in early adulthood | Occasional (5-29%) |
| HP:0100749 | Chest pain | Occasional (5-29%) |
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | hyperkalemic periodic paralysis |
| Mondo ID | MONDO:0008224 |
| MeSH | D020513 |
| OMIM | 170500 |
| Orphanet | 682 |
| DOID | DOID:14451 |
| ICD-11 | 1308452752 |
| NCIT | C123429 |
| SNOMED CT | 304737009 |
| UMLS | C0238357 |
| MedGen | 68665 |
| GARD | 0000195 |
| Is cancer (heuristic) | no |
Also known as: adynamia episodica hereditaria · adynamia episodica hereditaria with or without myotonia · familial hyperkalemic periodic paralysis · familial hyperkalemic periodic paralysis (disorder) [ambiguous] · familial hyperPP · Gamstorp disease · Gamstorp episodic adynamy · hyperkalemic periodic paralysis · hyperkalemic periodic paralysis, type 2 · hyperkalemic PP · hyperKPP · hyperPP · HYPP · normokalemic periodic paralysis, potassium-sensitive · primary hyperkalemic periodic paralysis · primary hyperPP · sodium channel muscle disease
Data availability: 2,046 ClinVar variants · 4 GenCC gene-disease records.
Disease family
Classification path: disease › human disease › disease by etiologic mechanism › disease of genetic or genomic mechanism › hereditary disease › inborn errors of metabolism › inborn metal metabolism disorder › familial periodic paralysis › hyperkalemic periodic paralysis
Related subtypes (5): Andersen-Tawil syndrome, hypokalemic periodic paralysis, normokalemic periodic paralysis, periodic paralysis with later-onset distal motor neuropathy, thyrotoxic periodic paralysis
Genetics & variants
GWAS landscape
No GWAS associations recorded — common-variant (GWAS) studies don’t cover this disease (typical for Mendelian / rare diseases). See the curated gene cohort and Mendelian overlap below.
Variant details and genetic-evidence tiers
ClinVar germline variants
600 retrieved; paginated sample, class counts are floors:
296 uncertain significance, 231 likely benign, 28 conflicting classifications of pathogenicity, 20 benign, 17 pathogenic, 4 likely pathogenic, 3 pathogenic/likely pathogenic, 1 benign/likely benign
| ClinVar | Variant (HGVS) | Gene | Classification | Review |
|---|---|---|---|---|
| 1723137 | NM_000083.3(CLCN1):c.2015G>A (p.Arg672His) | CLCN1 | Pathogenic | no assertion criteria provided |
| 1061004 | NM_000334.4(SCN4A):c.2143G>C (p.Ala715Pro) | GH-LCR | Pathogenic | criteria provided, single submitter |
| 1363699 | NM_000334.4(SCN4A):c.3263dup (p.Phe1089fs) | GH-LCR | Pathogenic | criteria provided, single submitter |
| 1422620 | NM_000334.4(SCN4A):c.2830_2831del (p.Phe944fs) | GH-LCR | Pathogenic | criteria provided, single submitter |
| 1451612 | NM_000334.4(SCN4A):c.4342C>G (p.Arg1448Gly) | GH-LCR | Pathogenic | criteria provided, single submitter |
| 2044217 | NM_000334.4(SCN4A):c.4472del (p.Leu1491fs) | GH-LCR | Pathogenic | criteria provided, single submitter |
| 1074599 | NM_000334.4(SCN4A):c.608T>A (p.Met203Lys) | SCN4A | Pathogenic | criteria provided, single submitter |
| 1331173 | NM_000334.4(SCN4A):c.665G>A (p.Arg222Gln) | SCN4A | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 1352149 | NM_000334.4(SCN4A):c.918G>A (p.Trp306Ter) | SCN4A | Pathogenic | criteria provided, single submitter |
| 1362468 | NM_000334.4(SCN4A):c.1775C>T (p.Thr592Ile) | SCN4A | Pathogenic | criteria provided, single submitter |
| 1420693 | NM_000334.4(SCN4A):c.1800C>G (p.Tyr600Ter) | SCN4A | Pathogenic | criteria provided, single submitter |
| 143199 | NM_000334.4(SCN4A):c.664C>T (p.Arg222Trp) | SCN4A | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 143201 | NM_000334.4(SCN4A):c.3404G>A (p.Arg1135His) | SCN4A | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 1453704 | NM_000334.4(SCN4A):c.584G>A (p.Trp195Ter) | SCN4A | Pathogenic | criteria provided, single submitter |
| 1457445 | NC_000017.10:g.(?62024385)(62034898_?)del | SCN4A | Pathogenic | criteria provided, single submitter |
| 1458366 | NM_000334.4(SCN4A):c.1249C>T (p.Arg417Ter) | SCN4A | Pathogenic | criteria provided, single submitter |
| 1941601 | NM_000334.4(SCN4A):c.1037-1G>A | SCN4A | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 1980672 | NM_000334.4(SCN4A):c.1925G>A (p.Trp642Ter) | SCN4A | Pathogenic | criteria provided, single submitter |
| 2001963 | NM_000334.4(SCN4A):c.1495del (p.Asp499fs) | SCN4A | Pathogenic | criteria provided, single submitter |
| 2017990 | NM_000334.4(SCN4A):c.1905C>A (p.Tyr635Ter) | SCN4A | Pathogenic | criteria provided, single submitter |
| 1256465 | NM_000334.4(SCN4A):c.4897C>G (p.Gln1633Glu) | GH-LCR | Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 1918174 | NM_000334.4(SCN4A):c.2078T>G (p.Ile693Ser) | GH-LCR | Likely pathogenic | criteria provided, single submitter |
| 1475468 | NM_000334.4(SCN4A):c.1762A>G (p.Ile588Val) | SCN4A | Likely pathogenic | criteria provided, single submitter |
| 1487760 | NM_000334.4(SCN4A):c.4098C>A (p.Asn1366Lys) | SCN4A | Likely pathogenic | criteria provided, single submitter |
| 1034440 | NM_000334.4(SCN4A):c.4827C>T (p.Ser1609=) | GH-LCR | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 1039768 | NM_000334.4(SCN4A):c.3394C>G (p.Arg1132Gly) | GH-LCR | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 130233 | NM_000334.4(SCN4A):c.3604G>A (p.Glu1202Lys) | GH-LCR | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 1359989 | NM_000334.4(SCN4A):c.2143G>A (p.Ala715Thr) | GH-LCR | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 1418261 | NM_000334.4(SCN4A):c.3696G>A (p.Leu1232=) | GH-LCR | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 143200 | NM_000334.4(SCN4A):c.3386G>A (p.Arg1129Gln) | GH-LCR | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 24 · Orphanet: 13 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
GenCC gene–disease validity (cohort genes)
the Disease column is the GenCC-asserted condition — a cohort gene’s strongest validity may be for a related predisposition syndrome.
| Gene | Classification | Inheritance | Disease | Records |
|---|---|---|---|---|
| SCN4A | Definitive | Autosomal dominant | hyperkalemic periodic paralysis | 24 |
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|---|---|
| SCN4A | Orphanet:681 | Hypokalemic periodic paralysis |
| SCN4A | Orphanet:682 | Hyperkalemic periodic paralysis |
| SCN4A | Orphanet:684 | Paramyotonia congenita of Von Eulenburg |
| SCN4A | Orphanet:98913 | Postsynaptic congenital myasthenic syndrome |
| SCN4A | Orphanet:99734 | Myotonia fluctuans |
| SCN4A | Orphanet:99735 | Myotonia permanens |
| SCN4A | Orphanet:99736 | Acetazolamide-responsive myotonia |
| CD79B | Orphanet:33110 | Autosomal non-syndromic agammaglobulinemia |
| CLCN1 | Orphanet:614 | Thomsen and Becker disease |
| POLG2 | Orphanet:254892 | Autosomal dominant progressive external ophthalmoplegia |
| RANBP2 | Orphanet:178342 | Inflammatory myofibroblastic tumor |
| RANBP2 | Orphanet:263524 | Acute necrotizing encephalopathy of childhood |
| RANBP2 | Orphanet:88619 | Familial acute necrotizing encephalopathy |
Cohort genes → proteins
5 cohort genes, 5 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|---|
| multi_evidence | 5 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|---|---|---|---|---|
| SCN4A | HGNC:10591 | ENSG00000007314 | P35499 | Sodium channel protein type 4 subunit alpha | gencc,clinvar |
| CD79B | HGNC:1699 | ENSG00000007312 | P40259 | B-cell antigen receptor complex-associated protein beta chain | clinvar |
| CLCN1 | HGNC:2019 | ENSG00000188037 | P35523 | Chloride channel protein 1 | clinvar |
| POLG2 | HGNC:9180 | ENSG00000256525 | Q9UHN1 | DNA polymerase subunit gamma-2 | clinvar |
| RANBP2 | HGNC:9848 | ENSG00000153201 | P49792 | E3 SUMO-protein ligase RanBP2 | clinvar |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|---|---|
| SCN4A | Sodium channel protein type 4 subunit alpha | Pore-forming subunit of Nav1.4, a voltage-gated sodium (Nav) channel that directly mediates the depolarizing phase of action potentials in excitable membranes. |
| CD79B | B-cell antigen receptor complex-associated protein beta chain | Required in cooperation with CD79A for initiation of the signal transduction cascade activated by the B-cell antigen receptor complex (BCR) which leads to internalization of the complex, trafficking to late endosomes and antigen presentati… |
| CLCN1 | Chloride channel protein 1 | Voltage-gated chloride channel involved in skeletal muscle excitability. |
| POLG2 | DNA polymerase subunit gamma-2 | Accessory subunit of DNA polymerase gamma solely responsible for replication of mitochondrial DNA (mtDNA). |
| RANBP2 | E3 SUMO-protein ligase RanBP2 | E3 SUMO-protein ligase which facilitates SUMO1 and SUMO2 conjugation by UBE2I. |
Protein-family classification
Druggable: 3 · Difficult: 1 · Unknown: 1 · Druggable fraction: 0.6
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|---|---|---|
| Ion channel | 1 | 22.3× | 0.220 |
| Antibody/Immunoglobulin | 1 | 5.8× | 0.400 |
| Enzyme (other) | 1 | 2.4× | 0.588 |
| Transcription factor | 1 | 1.6× | 0.595 |
| Other/Unknown | 1 | 0.4× | 0.983 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|---|---|---|---|
| SCN4A | Ion channel | yes | Na_channel_asu, Ion_trans_dom, Na_channel_a4su_mammal | |
| CD79B | Antibody/Immunoglobulin | yes | Phos_immunorcpt_sig_ITAM, Ig_sub, Ig-like_dom | |
| CLCN1 | Other/Unknown | no | ClC, Cl_channel-1, Cl-channel_core | |
| POLG2 | Enzyme (other) | yes | 2.7.7.7 | Anticodon-bd, Gly-tRNA_synthase/POLG2, Anticodon-bd_dom_sf |
| RANBP2 | Transcription factor | no | Ran_bind_dom, Znf_RanBP2, Cyclophilin-type_PPIase_dom |
Expression context
Cohort genes with no expression data: 0.
4 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 0 |
| broad (>20) | 5 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|---|
| hindlimb stylopod muscle | 2 |
| skeletal muscle tissue of rectus abdominis | 2 |
| gastrocnemius | 1 |
| granulocyte | 1 |
| lymph node | 1 |
| spleen | 1 |
| triceps brachii | 1 |
| left testis | 1 |
| oocyte | 1 |
| secondary oocyte | 1 |
| endothelial cell | 1 |
| mucosa of paranasal sinus | 1 |
| sperm | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|---|---|---|---|
| SCN4A | 153 | tissue_specific | yes | hindlimb stylopod muscle, gastrocnemius, skeletal muscle tissue of rectus abdominis |
| CD79B | 210 | broad | marker | granulocyte, spleen, lymph node |
| CLCN1 | 108 | tissue_specific | marker | hindlimb stylopod muscle, triceps brachii, skeletal muscle tissue of rectus abdominis |
| POLG2 | 249 | ubiquitous | marker | secondary oocyte, oocyte, left testis |
| RANBP2 | 294 | ubiquitous | marker | endothelial cell, sperm, mucosa of paranasal sinus |
Protein interactions among cohort
Intra-cohort edges: 1.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|---|
| RANBP2 | 7,348 |
| CD79B | 2,382 |
| SCN4A | 1,704 |
| POLG2 | 1,557 |
| CLCN1 | 1,191 |
Intra-cohort edges
| A | B | Sources |
|---|---|---|
| CLCN1 | SCN4A | string_interaction |
Structural data
PDB: 5 · AlphaFold-only: 0 · No structure: 0
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|---|---|
| POLG2 | Q9UHN1 | 38 |
| RANBP2 | P49792 | 33 |
| CLCN1 | P35523 | 9 |
| CD79B | P40259 | 5 |
| SCN4A | P35499 | 3 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 58. Enrichment computed across 5 evidence-associated genes (5 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 5 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| CD22 mediated BCR regulation | 1 | 456.8× | 0.046 | CD79B |
| Strand-asynchronous mitochondrial DNA replication | 1 | 228.4× | 0.046 | POLG2 |
| IPs transport between nucleus and cytosol | 1 | 76.1× | 0.046 | RANBP2 |
| IP3 and IP4 transport between cytosol and nucleus | 1 | 76.1× | 0.046 | RANBP2 |
| IP6 and IP7 transport between cytosol and nucleus | 1 | 76.1× | 0.046 | RANBP2 |
| Interaction between L1 and Ankyrins | 1 | 73.7× | 0.046 | SCN4A |
| Transport of Ribonucleoproteins into the Host Nucleus | 1 | 71.4× | 0.046 | RANBP2 |
| Regulation of Glucokinase by Glucokinase Regulatory Protein | 1 | 71.4× | 0.046 | RANBP2 |
| Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC) | 1 | 71.4× | 0.046 | RANBP2 |
| Antigen activates B Cell Receptor (BCR) leading to generation of second messengers | 1 | 71.4× | 0.046 | CD79B |
| NEP/NS2 Interacts with the Cellular Export Machinery | 1 | 69.2× | 0.046 | RANBP2 |
| Phase 0 - rapid depolarisation | 1 | 69.2× | 0.046 | SCN4A |
| Signaling by the B Cell Receptor (BCR) | 1 | 69.2× | 0.046 | CD79B |
| Nuclear import of Rev protein | 1 | 67.2× | 0.046 | RANBP2 |
| Vpr-mediated nuclear import of PICs | 1 | 67.2× | 0.046 | RANBP2 |
| Transport of the SLBP independent Mature mRNA | 1 | 65.3× | 0.046 | RANBP2 |
| SUMOylation of SUMOylation proteins | 1 | 65.3× | 0.046 | RANBP2 |
| Transport of the SLBP Dependant Mature mRNA | 1 | 63.4× | 0.046 | RANBP2 |
| Rev-mediated nuclear export of HIV RNA | 1 | 63.4× | 0.046 | RANBP2 |
| Nuclear Pore Complex (NPC) Disassembly | 1 | 61.7× | 0.046 | RANBP2 |
| SUMOylation of ubiquitinylation proteins | 1 | 58.6× | 0.046 | RANBP2 |
| NS1 Mediated Effects on Host Pathways | 1 | 57.1× | 0.046 | RANBP2 |
| Transport of Mature mRNA Derived from an Intronless Transcript | 1 | 54.4× | 0.046 | RANBP2 |
| Viral Messenger RNA Synthesis | 1 | 51.9× | 0.046 | RANBP2 |
| SUMOylation of DNA replication proteins | 1 | 49.6× | 0.046 | RANBP2 |
| SUMOylation of RNA binding proteins | 1 | 47.6× | 0.046 | RANBP2 |
| snRNP Assembly | 1 | 42.3× | 0.050 | RANBP2 |
| Transcriptional activation of mitochondrial biogenesis | 1 | 40.8× | 0.050 | POLG2 |
| tRNA processing in the nucleus | 1 | 39.4× | 0.050 | RANBP2 |
| SUMOylation of chromatin organization proteins | 1 | 31.7× | 0.057 | RANBP2 |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 5 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| regulation of skeletal muscle contraction by action potential | 1 | 3370.4× | 0.004 | SCN4A |
| muscle contraction | 2 | 83.2× | 0.004 | SCN4A, CLCN1 |
| positive regulation of DNA-directed DNA polymerase activity | 1 | 421.3× | 0.018 | POLG2 |
| mitochondrial DNA replication | 1 | 306.4× | 0.018 | POLG2 |
| nuclear export | 1 | 306.4× | 0.018 | RANBP2 |
| neuronal action potential propagation | 1 | 280.9× | 0.018 | CLCN1 |
| regulation of gluconeogenesis | 1 | 224.7× | 0.019 | RANBP2 |
| centrosome localization | 1 | 177.4× | 0.021 | RANBP2 |
| NLS-bearing protein import into nucleus | 1 | 160.5× | 0.021 | RANBP2 |
| cardiac muscle cell action potential involved in contraction | 1 | 140.4× | 0.021 | SCN4A |
| intracellular glucose homeostasis | 1 | 116.2× | 0.022 | RANBP2 |
| DNA-templated DNA replication | 1 | 112.3× | 0.022 | POLG2 |
| response to amphetamine | 1 | 99.1× | 0.023 | RANBP2 |
| chloride transport | 1 | 91.1× | 0.023 | CLCN1 |
| B cell receptor signaling pathway | 1 | 80.2× | 0.024 | CD79B |
| nucleocytoplasmic transport | 1 | 78.4× | 0.024 | RANBP2 |
| protein sumoylation | 1 | 64.8× | 0.027 | RANBP2 |
| sodium ion transport | 1 | 54.4× | 0.030 | SCN4A |
| mRNA transport | 1 | 52.7× | 0.030 | RANBP2 |
| chloride transmembrane transport | 1 | 47.5× | 0.031 | CLCN1 |
| B cell differentiation | 1 | 43.8× | 0.032 | CD79B |
| sodium ion transmembrane transport | 1 | 40.6× | 0.033 | SCN4A |
| response to bacterium | 1 | 38.7× | 0.033 | CD79B |
| mitochondrion organization | 1 | 30.4× | 0.041 | POLG2 |
| protein folding | 1 | 20.7× | 0.057 | RANBP2 |
| adaptive immune response | 1 | 16.9× | 0.067 | CD79B |
| in utero embryonic development | 1 | 14.4× | 0.075 | POLG2 |
| immune response | 1 | 9.4× | 0.109 | CD79B |
| negative regulation of transcription by RNA polymerase II | 1 | 3.5× | 0.261 | RANBP2 |
| signal transduction | 1 | 3.2× | 0.275 | CD79B |
Therapeutics
Drugs indicated for this disease
0 approved, 1 in late-stage (phase 3) trials. Disease-direct ChEMBL indications, not inferred from the associated-gene cohort below.
| Drug | Development status |
|---|---|
| Dichlorphenamide | Phase 3 (in late-stage trials) |
Drug target analysis
Approved (phase 4): 1 · Phase ≥3: 1 · Phased (≥1): 1 · Undrugged: 4
Druggability breadth: 4 of 5 evidence-associated genes (80%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Genes with an approved drug
The molecule shown is one approved compound that hits the gene — not necessarily a drug of choice or one indicated for this disease.
| Symbol | Example approved molecule |
|---|---|
| SCN4A | CARBAMAZEPINE |
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|---|---|
| SCN4A | 24 | 4 |
| CD79B | 0 | 0 |
| CLCN1 | 0 | 0 |
| POLG2 | 0 | 0 |
| RANBP2 | 0 | 0 |
Drugs targeting cohort genes (top 30)
| Molecule | Max phase | Targets in cohort |
|---|---|---|
| CARBAMAZEPINE | 4 | SCN4A |
| PHENYTOIN | 4 | SCN4A |
| LAMOTRIGINE | 4 | SCN4A |
| RILUZOLE | 4 | SCN4A |
| LIDOCAINE | 4 | SCN4A |
| IMIPRAMINE | 4 | SCN4A |
| SERTINDOLE | 4 | SCN4A |
| PIMOZIDE | 4 | SCN4A |
| NIFEDIPINE | 4 | SCN4A |
| DILTIAZEM | 4 | SCN4A |
| MIBEFRADIL | 4 | SCN4A |
| HALOPERIDOL | 4 | SCN4A |
| MEXILETINE | 4 | SCN4A |
| AMITRIPTYLINE | 4 | SCN4A |
| AMIODARONE | 4 | SCN4A |
| CHLORPROMAZINE | 4 | SCN4A |
| VIXOTRIGINE | 3 | SCN4A |
| ELECLAZINE | 3 | SCN4A |
| TETRODOTOXIN | 3 | SCN4A |
| TEDISAMIL | 3 | SCN4A |
| NITRENDIPINE | 3 | SCN4A |
| AJMALINE | 3 | SCN4A |
| PF-05089771 | 2 | SCN4A |
| CIFENLINE | 2 | SCN4A |
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 1.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|---|---|
| SCN4A | 95 | Binding:69, Functional:18, ADMET:7, Toxicity:1 |
| CD79B | 1 | Binding:1 |
| POLG2 | 1 | Binding:1 |
| RANBP2 | 1 | Binding:1 |
Cohort enzymes (BRENDA EC)
| Symbol | EC numbers | Names |
|---|---|---|
| POLG2 | 2.7.7.7 | DNA-directed DNA polymerase |
Pharmacogenomics
Cohort genes with a PharmGKB record: 5; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Chemical tractability of cohort targets
23 approved/phased compounds have measured bioactivity against a cohort gene (and aren’t yet in disease-level trials). This is a research / tractability signal, NOT a therapeutic recommendation — a bioactivity row often reflects off-target or screening binding (e.g. promiscuous kinase inhibitors against a cohort kinase), implying no disease mechanism.
| Compound | Max phase | Cohort target (bioactivity) |
|---|---|---|
| CARBAMAZEPINE | 4 | SCN4A |
| PHENYTOIN | 4 | SCN4A |
| RILUZOLE | 4 | SCN4A |
| LIDOCAINE | 4 | SCN4A |
| IMIPRAMINE | 4 | SCN4A |
| SERTINDOLE | 4 | SCN4A |
| PIMOZIDE | 4 | SCN4A |
| NIFEDIPINE | 4 | SCN4A |
| DILTIAZEM | 4 | SCN4A |
| MIBEFRADIL | 4 | SCN4A |
| HALOPERIDOL | 4 | SCN4A |
| MEXILETINE | 4 | SCN4A |
| AMITRIPTYLINE | 4 | SCN4A |
| AMIODARONE | 4 | SCN4A |
| CHLORPROMAZINE | 4 | SCN4A |
| VIXOTRIGINE | 3 | SCN4A |
| ELECLAZINE | 3 | SCN4A |
| TETRODOTOXIN | 3 | SCN4A |
| TEDISAMIL | 3 | SCN4A |
| NITRENDIPINE | 3 | SCN4A |
| AJMALINE | 3 | SCN4A |
| PF-05089771 | 2 | SCN4A |
| CIFENLINE | 2 | SCN4A |
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|---|---|---|
| A | Approved (phase 4 drug) | 1 | SCN4A |
| B | Phased (≥1) drug, not yet approved | 0 | |
| C | Druggable family + PDB, no drug | 2 | CD79B, POLG2 |
| D | Druggable family + AlphaFold only, no drug | 0 | |
| E | Difficult family or no structure, no drug | 2 | CLCN1, RANBP2 |
Undrugged target profiles
4 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
| Symbol | ChEMBL assays | Drugged partners (top 3) |
|---|---|---|
| CLCN1 | 0 | SCN4A |
| CD79B | 1 | — |
| POLG2 | 1 | — |
| RANBP2 | 1 | — |
Clinical trials & evidence
Clinical trials
Clinical trials: 3.
Phase distribution (across all retrieved trials)
| Phase | Trials |
|---|---|
| PHASE3 | 2 |
| Not specified | 1 |
Top trials by phase / activity
| NCT | Phase | Status | Title |
|---|---|---|---|
| NCT00494507 | PHASE3 | COMPLETED | Hyper- and Hypokalemic Periodic Paralysis Study |
| NCT01939561 | PHASE3 | COMPLETED | Lamotrigine as Treatment of Myotonia |
| NCT07194174 | Not specified | RECRUITING | Effect of Physical Training in Individuals With Hypokalemic and Hyperkalemic Periodic Paralysis |
Drugs tested across these trials (top 30)
| Molecule | Max phase | Trials referencing |
|---|---|---|
| DICHLORPHENAMIDE | 4 | 1 |
| LAMOTRIGINE | 4 | 1 |
Related Atlas pages
- Cohort genes: SCN4A, CD79B, CLCN1, POLG2, RANBP2
- Drugs: Dichlorphenamide, Lamotrigine