Hyperparathyroidism
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Summary
Hyperparathyroidism (MONDO:0001741) is a disease with 3 cohort genes (8 GWAS associations across 13 studies) and 71 clinical trials. Top therapeutic interventions include cinacalcet, cholecalciferol, and methylene blue cation.
At a glance
- Cohort genes: 3
- GWAS associations: 8
- ClinVar variants: 49
- Clinical trials: 71
Clinical features
No curated clinical features (Orphanet) for this disease.
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | hyperparathyroidism |
| Mondo ID | MONDO:0001741 |
| EFO | EFO:0008506 |
| MeSH | D006961 |
| DOID | DOID:13543 |
| ICD-11 | 9633776 |
| NCIT | C48259 |
| SNOMED CT | 66999008 |
| UMLS | C0020502 |
| MedGen | 6967 |
| Is cancer (heuristic) | no |
Also known as: hyperparathyroidism
Data availability: 49 ClinVar variants · 8 GWAS associations (13 studies).
Disease family
An umbrella term covering 4 Mondo subtypes.
Classification path: disease › human disease › disease by body system or component › endocrine system disorder › parathyroid gland disorder › hyperparathyroidism
Related subtypes (3): hypoparathyroidism, parathyroid hyperplasia, tumor of parathyroid gland
Subtypes (4): secondary hyperparathyroidism, primary hyperparathyroidism, hereditary hyperparathyroidism, tertiary hyperparathyroidism
Genetics & variants
GWAS landscape
8 GWAS associations across 13 studies. Top hits map to 2 distinct genes (as reported by GWAS).
Top associations by p-value
| rsID | p-value | Gene | Risk allele | Odds ratio |
|---|---|---|---|---|
| chr6:10869648 | 4e-19 | G | 0.18 | |
| rs6906900 | 1e-18 | TMEM14B - GCM2 | T | 0.17 |
| rs149743155 | 1e-14 | MIR6500 - C1orf185 | T | 0.47 |
| rs3091842 | 8e-13 | MAFB - RNA5SP484 | G | 0.3 |
| rs78132596 | 8e-12 | C1orf185 | A | 0.45 |
| rs73885319 | 4e-11 | APOL1 | A | 0.24 |
| rs138668844 | 2e-09 | CHD1-DT - LINC02113 | ? |
Top studies (by case count)
| Study | Lead author | Year | Cases | Controls | Title |
|---|---|---|---|---|---|
| GCST90475693 | Verma A | 2024 | 5,490 | 442,955 | Diversity and scale: Genetic architecture of 2068 traits in the VA Million Veteran Program. |
| GCST90475692 | Verma A | 2024 | 2,152 | 118,432 | Diversity and scale: Genetic architecture of 2068 traits in the VA Million Veteran Program. |
| GCST90479894 | Verma A | 2024 | 2,152 | 118,432 | Diversity and scale: Genetic architecture of 2068 traits in the VA Million Veteran Program. |
| GCST90079753 | Backman JD | 2021 | 1,168 | 386,457 | Exome sequencing and analysis of 454,787 UK Biobank participants. |
| GCST90083739 | Backman JD | 2021 | 1,168 | 386,457 | Exome sequencing and analysis of 454,787 UK Biobank participants. |
| GCST90435718 | Zhou W | 2018 | 781 | 405,386 | Efficiently controlling for case-control imbalance and sample relatedness in large-scale genetic association studies. |
| GCST90477331 | Verma A | 2024 | 617 | 58,944 | Diversity and scale: Genetic architecture of 2068 traits in the VA Million Veteran Program. |
| GCST90079752 | Backman JD | 2021 | 512 | 387,308 | Exome sequencing and analysis of 454,787 UK Biobank participants. |
| GCST90083738 | Backman JD | 2021 | 512 | 387,308 | Exome sequencing and analysis of 454,787 UK Biobank participants. |
| GCST90043642 | Jiang L | 2021 | 438 | 455,910 | A generalized linear mixed model association tool for biobank-scale data. |
Variant details and genetic-evidence tiers
Tier distribution (top 50 variants)
| Tier | Variants |
|---|---|
| Tier 1: coding | 1 |
| Tier 2: splice/UTR | 0 |
| Tier 3: regulatory | 0 |
| Tier 4: intronic/intergenic | 6 |
MAF distribution
| Bucket | Variants |
|---|---|
| common (>=0.05) | 3 |
| low_freq (0.01-0.05) | 3 |
| rare (<0.01) | 0 |
| unknown | 1 |
Functional consequences
| Consequence | Count |
|---|---|
| intron_variant | 3 |
| intergenic_variant | 2 |
| unknown | 1 |
| missense_variant | 1 |
Top variants
| rsID | Chr | Pos | Alleles | MAF | Consequence | Gene | p-value | Tier |
|---|---|---|---|---|---|---|---|---|
| chr6:10869648 | 0.448 | 4e-19 | Tier 4: intronic/intergenic | |||||
| rs6906900 | 6 | 10853114 | T>C,G | 0.309 | intron_variant | TMEM14B - GCM2 | 1e-18 | Tier 4: intronic/intergenic |
| rs149743155 | 1 | 51082101 | T>C | 0.01 | intergenic_variant | MIR6500 - C1orf185 | 1e-14 | Tier 4: intronic/intergenic |
| rs3091842 | 20 | 40715632 | G>A | 0.04 | intron_variant | MAFB - RNA5SP484 | 8e-13 | Tier 4: intronic/intergenic |
| rs78132596 | 1 | 51115895 | A>T | 0.048 | intron_variant | C1orf185 | 8e-12 | Tier 4: intronic/intergenic |
| rs73885319 | 22 | 36265860 | A>G | 0.224 | missense_variant | APOL1 | 4e-11 | Tier 1: coding |
| rs138668844 | 5 | 99270750 | T>A,C | intergenic_variant | CHD1-DT - LINC02113 | 2e-09 | Tier 4: intronic/intergenic |
ClinVar germline variants
49 retrieved; paginated sample, class counts are floors:
25 conflicting classifications of pathogenicity, 14 uncertain significance, 5 benign/likely benign, 4 benign, 1 likely pathogenic
| ClinVar | Variant (HGVS) | Gene | Classification | Review |
|---|---|---|---|---|
| 818220 | NM_018646.6(TRPV6):c.1978G>C (p.Gly660Arg) | TRPV6 | Likely pathogenic | criteria provided, single submitter |
| 21680 | NM_024529.5(CDC73):c.-11G>A | CDC73 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 136169 | NM_001370259.2(MEN1):c.30G>T (p.Leu10=) | MEN1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 161294 | NM_001370259.2(MEN1):c.511C>T (p.Arg171Trp) | MEN1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 161295 | NM_001370259.2(MEN1):c.563C>T (p.Pro188Leu) | MEN1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 188099 | NM_001370259.2(MEN1):c.1409C>T (p.Pro470Leu) | MEN1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 188265 | NM_001370259.2(MEN1):c.1535C>T (p.Ser512Leu) | MEN1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 200987 | NM_001370259.2(MEN1):c.1618C>T (p.Pro540Ser) | MEN1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 215961 | NM_001370259.2(MEN1):c.1351-4C>T | MEN1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 215966 | NM_001370259.2(MEN1):c.762G>A (p.Leu254=) | MEN1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 241822 | NM_001370259.2(MEN1):c.655-6C>G | MEN1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 255616 | NM_001370259.2(MEN1):c.1003C>A (p.Arg335=) | MEN1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 305302 | NM_001370259.2(MEN1):c.*470A>G | MEN1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 305313 | NM_001370259.2(MEN1):c.1186-10C>T | MEN1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 305314 | NM_001370259.2(MEN1):c.327A>C (p.Glu109Asp) | MEN1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 305315 | NM_001370259.2(MEN1):c.61C>A (p.Arg21Ser) | MEN1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 36519 | NM_001370259.2(MEN1):c.1049+9C>T | MEN1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 36524 | NM_001370259.2(MEN1):c.1296G>A (p.Leu432=) | MEN1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 412561 | NM_001370259.2(MEN1):c.753C>T (p.Thr251=) | MEN1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 412579 | NM_001370259.2(MEN1):c.570G>A (p.Gly190=) | MEN1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 41854 | NM_001370259.2(MEN1):c.512G>A (p.Arg171Gln) | MEN1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 41855 | NM_001370259.2(MEN1):c.774G>C (p.Gln258His) | MEN1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 485711 | NM_001370259.2(MEN1):c.941G>A (p.Arg314Gln) | MEN1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 877570 | NM_001370259.2(MEN1):c.849G>T (p.Leu283=) | MEN1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 880309 | NM_001370259.2(MEN1):c.*126C>T | MEN1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 96253 | NM_001370259.2(MEN1):c.655-6C>T | MEN1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 305303 | NM_001370259.2(MEN1):c.*438C>T | MEN1 | Uncertain significance | criteria provided, single submitter |
| 305304 | NM_001370259.2(MEN1):c.*392G>A | MEN1 | Uncertain significance | criteria provided, single submitter |
| 305305 | NM_001370259.2(MEN1):c.*373G>C | MEN1 | Uncertain significance | criteria provided, single submitter |
| 305309 | NM_001370259.2(MEN1):c.*272T>C | MEN1 | Uncertain significance | criteria provided, single submitter |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 0 · Orphanet: 12 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|---|---|
| TRPV6 | Orphanet:417 | Neonatal severe primary hyperparathyroidism |
| TRPV6 | Orphanet:676 | Autosomal dominant hereditary chronic pancreatitis |
| CDC73 | Orphanet:143 | Parathyroid carcinoma |
| CDC73 | Orphanet:99879 | Familial isolated hyperparathyroidism |
| CDC73 | Orphanet:99880 | Hyperparathyroidism-jaw tumor syndrome |
| MEN1 | Orphanet:2965 | Prolactinoma |
| MEN1 | Orphanet:314786 | Silent pituitary adenoma |
| MEN1 | Orphanet:314790 | Null pituitary adenoma |
| MEN1 | Orphanet:652 | Multiple endocrine neoplasia type 1 |
| MEN1 | Orphanet:97279 | Insulinoma |
| MEN1 | Orphanet:99725 | Pituitary gigantism |
| MEN1 | Orphanet:99879 | Familial isolated hyperparathyroidism |
Cohort genes → proteins
3 cohort genes, 3 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|---|
| multi_evidence | 3 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|---|---|---|---|---|
| TRPV6 | HGNC:14006 | ENSG00000165125 | Q9H1D0 | Transient receptor potential cation channel subfamily V member 6 | clinvar |
| CDC73 | HGNC:16783 | ENSG00000134371 | Q6P1J9 | Parafibromin | clinvar |
| MEN1 | HGNC:7010 | ENSG00000133895 | O00255 | Menin | clinvar |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|---|---|
| TRPV6 | Transient receptor potential cation channel subfamily V member 6 | Calcium selective cation channel that mediates Ca(2+) uptake in various tissues, including the intestine. |
| CDC73 | Parafibromin | Tumor suppressor probably involved in transcriptional and post-transcriptional control pathways. |
| MEN1 | Menin | Essential component of a MLL/SET1 histone methyltransferase (HMT) complex, a complex that specifically methylates ‘Lys-4’ of histone H3 (H3K4). |
Protein-family classification
Druggable: 1 · Difficult: 0 · Unknown: 2 · Druggable fraction: 0.33
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|---|---|---|
| Ion channel | 1 | 37.2× | 0.053 |
| Other/Unknown | 2 | 1.2× | 0.587 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|---|---|---|---|
| TRPV6 | Ion channel | yes | Ankyrin_rpt, Ion_trans_dom, TRPV5/TRPV6 | |
| CDC73 | Other/Unknown | no | Cdc73/Parafibromin, CDC73_C, Cdc73_N | |
| MEN1 | Other/Unknown | no | Menin |
Expression context
Cohort genes with no expression data: 0.
3 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 0 |
| broad (>20) | 3 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|---|
| body of pancreas | 1 |
| duodenum | 1 |
| pancreas | 1 |
| calcaneal tendon | 1 |
| colonic epithelium | 1 |
| sural nerve | 1 |
| granulocyte | 1 |
| lower esophagus mucosa | 1 |
| right hemisphere of cerebellum | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|---|---|---|---|
| TRPV6 | 125 | tissue_specific | marker | body of pancreas, pancreas, duodenum |
| CDC73 | 271 | ubiquitous | marker | calcaneal tendon, sural nerve, colonic epithelium |
| MEN1 | 271 | ubiquitous | marker | granulocyte, lower esophagus mucosa, right hemisphere of cerebellum |
Protein interactions among cohort
Intra-cohort edges: 1.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|---|
| MEN1 | 5,226 |
| CDC73 | 4,592 |
| TRPV6 | 1,197 |
Intra-cohort edges
| A | B | Sources |
|---|---|---|
| CDC73 | MEN1 | string_interaction |
Structural data
PDB: 3 · AlphaFold-only: 0 · No structure: 0
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|---|---|
| MEN1 | O00255 | 69 |
| TRPV6 | Q9H1D0 | 24 |
| CDC73 | Q6P1J9 | 20 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 34. Enrichment computed across 3 evidence-associated genes (3 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 3 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| Formation of the beta-catenin:TCF transactivating complex | 2 | 80.1× | 0.003 | CDC73, MEN1 |
| TCF dependent signaling in response to WNT | 2 | 78.5× | 0.003 | CDC73, MEN1 |
| Signaling by WNT | 2 | 74.6× | 0.003 | CDC73, MEN1 |
| Protein ubiquitination | 1 | 271.9× | 0.027 | CDC73 |
| TRP channels | 1 | 135.9× | 0.027 | TRPV6 |
| Transcriptional activity of SMAD2/SMAD3:SMAD4 heterotrimer | 1 | 122.8× | 0.027 | MEN1 |
| RHO GTPases activate IQGAPs | 1 | 115.3× | 0.027 | MEN1 |
| Dengue virus activates/modulates innate and adaptive immune responses | 1 | 112.0× | 0.027 | CDC73 |
| SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription | 1 | 102.9× | 0.027 | MEN1 |
| RNA Polymerase II Transcription | 2 | 15.0× | 0.027 | CDC73, MEN1 |
| Post-translational protein modification | 2 | 12.8× | 0.027 | CDC73, MEN1 |
| Gene expression (Transcription) | 2 | 11.9× | 0.027 | CDC73, MEN1 |
| Formation of WDR5-containing histone-modifying complexes | 1 | 88.5× | 0.029 | MEN1 |
| Deactivation of the beta-catenin transactivating complex | 1 | 77.7× | 0.029 | MEN1 |
| Signaling by TGF-beta Receptor Complex | 1 | 66.8× | 0.029 | MEN1 |
| Formation of RNA Pol II elongation complex | 1 | 64.5× | 0.029 | CDC73 |
| RNA Polymerase II Transcription Elongation | 1 | 64.5× | 0.029 | CDC73 |
| E3 ubiquitin ligases ubiquitinate target proteins | 1 | 64.5× | 0.029 | CDC73 |
| Signaling by Hedgehog | 1 | 61.4× | 0.029 | CDC73 |
| Hedgehog ‘on’ state | 1 | 52.9× | 0.030 | CDC73 |
| Epigenetic regulation by WDR5-containing histone modifying complexes | 1 | 51.4× | 0.030 | MEN1 |
| Metabolism of proteins | 2 | 8.2× | 0.030 | CDC73, MEN1 |
| Differentiation of naive CD4+ T cells to T helper 2 cells (Th2 cells) | 1 | 48.8× | 0.030 | MEN1 |
| RNA Polymerase II Pre-transcription Events | 1 | 45.9× | 0.031 | CDC73 |
| Signaling by TGFB family members | 1 | 38.5× | 0.034 | MEN1 |
| CHD1 and CHD2 subfamily | 1 | 36.2× | 0.034 | CDC73 |
| Signal Transduction | 2 | 6.8× | 0.034 | CDC73, MEN1 |
| Post-translational protein phosphorylation | 1 | 33.4× | 0.036 | MEN1 |
| Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs) | 1 | 28.8× | 0.040 | MEN1 |
| Epigenetic regulation of gene expression | 1 | 23.8× | 0.047 | MEN1 |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 3 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| parathyroid hormone secretion | 1 | 2808.7× | 0.012 | TRPV6 |
| positive regulation of mRNA 3’-end processing | 1 | 1123.5× | 0.012 | CDC73 |
| endodermal cell fate commitment | 1 | 936.2× | 0.012 | CDC73 |
| negative regulation of cyclin-dependent protein serine/threonine kinase activity | 1 | 702.2× | 0.012 | MEN1 |
| T-helper 2 cell differentiation | 1 | 624.1× | 0.012 | MEN1 |
| negative regulation of cell population proliferation | 2 | 28.1× | 0.012 | CDC73, MEN1 |
| positive regulation of cell cycle G1/S phase transition | 1 | 374.5× | 0.014 | CDC73 |
| osteoblast development | 1 | 330.4× | 0.014 | MEN1 |
| regulation of calcium ion-dependent exocytosis | 1 | 312.1× | 0.014 | TRPV6 |
| negative regulation of myeloid cell differentiation | 1 | 312.1× | 0.014 | CDC73 |
| obsolete negative regulation of DNA-binding transcription factor activity | 1 | 244.2× | 0.014 | MEN1 |
| negative regulation of protein phosphorylation | 1 | 193.7× | 0.014 | MEN1 |
| response to gamma radiation | 1 | 193.7× | 0.014 | MEN1 |
| mRNA 3’-end processing | 1 | 187.2× | 0.014 | CDC73 |
| negative regulation of JNK cascade | 1 | 187.2× | 0.014 | MEN1 |
| calcium ion import across plasma membrane | 1 | 181.2× | 0.014 | TRPV6 |
| positive regulation of transforming growth factor beta receptor signaling pathway | 1 | 175.5× | 0.014 | MEN1 |
| negative regulation of fibroblast proliferation | 1 | 165.2× | 0.014 | CDC73 |
| transcription elongation by RNA polymerase II | 1 | 147.8× | 0.014 | CDC73 |
| calcium ion homeostasis | 1 | 147.8× | 0.014 | TRPV6 |
| stem cell population maintenance | 1 | 140.4× | 0.014 | CDC73 |
| positive regulation of Wnt signaling pathway | 1 | 127.7× | 0.014 | CDC73 |
| transcription initiation-coupled chromatin remodeling | 1 | 127.7× | 0.014 | MEN1 |
| response to UV | 1 | 122.1× | 0.014 | MEN1 |
| negative regulation of G1/S transition of mitotic cell cycle | 1 | 119.5× | 0.014 | CDC73 |
| response to calcium ion | 1 | 106.0× | 0.014 | TRPV6 |
| positive regulation of transcription elongation by RNA polymerase II | 1 | 100.3× | 0.014 | CDC73 |
| negative regulation of osteoblast differentiation | 1 | 98.5× | 0.014 | MEN1 |
| protein destabilization | 1 | 96.8× | 0.014 | CDC73 |
| negative regulation of cell cycle | 1 | 96.8× | 0.014 | MEN1 |
Therapeutics
Drugs indicated for this disease
0 approved, 3 in late-stage (phase 3) trials. Disease-direct ChEMBL indications, not inferred from the associated-gene cohort below.
| Drug | Development status |
|---|---|
| Cholecalciferol | Phase 3 (in late-stage trials) |
| Cinacalcet | Phase 3 (in late-stage trials) |
| Paricalcitol | Phase 3 (in late-stage trials) |
Drug target analysis
Approved (phase 4): 2 · Phase ≥3: 2 · Phased (≥1): 3 · Undrugged: 0
Druggability breadth: 3 of 3 evidence-associated genes (100%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Genes with an approved drug
The molecule shown is one approved compound that hits the gene — not necessarily a drug of choice or one indicated for this disease.
| Symbol | Example approved molecule |
|---|---|
| TRPV6 | ECONAZOLE |
| MEN1 | LOPERAMIDE |
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|---|---|
| MEN1 | 475 | 4 |
| TRPV6 | 3 | 4 |
| CDC73 | 1 | 2 |
Drugs targeting cohort genes (top 30)
| Molecule | Max phase | Targets in cohort |
|---|---|---|
| ECONAZOLE | 4 | TRPV6 |
| LOPERAMIDE | 4 | MEN1 |
| CANDESARTAN CILEXETIL | 4 | MEN1 |
| EVANS BLUE FREE ACID | 4 | MEN1 |
| DIENESTROL | 4 | MEN1 |
| BEXAROTENE | 4 | MEN1 |
| IFOSFAMIDE | 4 | MEN1 |
| PROGESTERONE | 4 | MEN1 |
| CLOTRIMAZOLE | 4 | MEN1 |
| AMINOCAPROIC ACID | 4 | MEN1 |
| LATANOPROST | 4 | MEN1 |
| FLUORESCEIN | 4 | MEN1 |
| OXCARBAZEPINE | 4 | MEN1 |
| SALMETEROL XINAFOATE | 4 | MEN1 |
| AMIODARONE HYDROCHLORIDE | 4 | MEN1 |
| TRICLABENDAZOLE | 4 | MEN1 |
| TRYPAN BLUE FREE ACID | 4 | MEN1 |
| MIGALASTAT | 4 | MEN1 |
| DROPERIDOL | 4 | MEN1 |
| ARIPIPRAZOLE | 4 | MEN1 |
| AMOXAPINE | 4 | MEN1 |
| RALOXIFENE HYDROCHLORIDE | 4 | MEN1 |
| IDARUBICIN | 4 | MEN1 |
| ACETAMINOPHEN | 4 | MEN1 |
| OXYBUTYNIN CHLORIDE | 4 | MEN1 |
| DECAMETHONIUM BROMIDE | 4 | MEN1 |
| DESLORATADINE | 4 | MEN1 |
| DITHIAZANINE | 4 | MEN1 |
| TRIMETREXATE | 4 | MEN1 |
| NICARDIPINE HYDROCHLORIDE | 4 | MEN1 |
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 0.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|---|---|
| MEN1 | 93 | Binding:86, Functional:7 |
| TRPV6 | 32 | Binding:32 |
| CDC73 | 8 | Binding:8 |
Pharmacogenomics
Cohort genes with a PharmGKB record: 3; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Chemical tractability of cohort targets
30 approved/phased compounds have measured bioactivity against a cohort gene (and aren’t yet in disease-level trials). This is a research / tractability signal, NOT a therapeutic recommendation — a bioactivity row often reflects off-target or screening binding (e.g. promiscuous kinase inhibitors against a cohort kinase), implying no disease mechanism.
| Compound | Max phase | Cohort target (bioactivity) |
|---|---|---|
| ECONAZOLE | 4 | TRPV6 |
| LOPERAMIDE | 4 | MEN1 |
| CANDESARTAN CILEXETIL | 4 | MEN1 |
| EVANS BLUE FREE ACID | 4 | MEN1 |
| DIENESTROL | 4 | MEN1 |
| BEXAROTENE | 4 | MEN1 |
| IFOSFAMIDE | 4 | MEN1 |
| PROGESTERONE | 4 | MEN1 |
| CLOTRIMAZOLE | 4 | MEN1 |
| AMINOCAPROIC ACID | 4 | MEN1 |
| LATANOPROST | 4 | MEN1 |
| FLUORESCEIN | 4 | MEN1 |
| OXCARBAZEPINE | 4 | MEN1 |
| SALMETEROL XINAFOATE | 4 | MEN1 |
| AMIODARONE HYDROCHLORIDE | 4 | MEN1 |
| TRICLABENDAZOLE | 4 | MEN1 |
| TRYPAN BLUE FREE ACID | 4 | MEN1 |
| MIGALASTAT | 4 | MEN1 |
| DROPERIDOL | 4 | MEN1 |
| ARIPIPRAZOLE | 4 | MEN1 |
| AMOXAPINE | 4 | MEN1 |
| RALOXIFENE HYDROCHLORIDE | 4 | MEN1 |
| IDARUBICIN | 4 | MEN1 |
| ACETAMINOPHEN | 4 | MEN1 |
| OXYBUTYNIN CHLORIDE | 4 | MEN1 |
| DECAMETHONIUM BROMIDE | 4 | MEN1 |
| DESLORATADINE | 4 | MEN1 |
| DITHIAZANINE | 4 | MEN1 |
| TRIMETREXATE | 4 | MEN1 |
| NICARDIPINE HYDROCHLORIDE | 4 | MEN1 |
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|---|---|---|
| A | Approved (phase 4 drug) | 2 | TRPV6, MEN1 |
| B | Phased (≥1) drug, not yet approved | 1 | CDC73 |
| C | Druggable family + PDB, no drug | 0 | |
| D | Druggable family + AlphaFold only, no drug | 0 | |
| E | Difficult family or no structure, no drug | 0 |
Undrugged target profiles
0 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
Clinical trials & evidence
Clinical trials
Clinical trials: 71.
Phase distribution (across all retrieved trials)
| Phase | Trials |
|---|---|
| Not specified | 47 |
| PHASE3 | 6 |
| PHASE4 | 5 |
| PHASE2 | 4 |
| EARLY_PHASE1 | 3 |
| PHASE1 | 3 |
| PHASE2/PHASE3 | 2 |
| PHASE1/PHASE2 | 1 |
Top trials by phase / activity
| NCT | Phase | Status | Title |
|---|---|---|---|
| NCT00037518 | PHASE4 | COMPLETED | A Study of an Investigational Medication for Severe Primary Hyperparathyroidism or Parathyroid Cancer |
| NCT00359385 | PHASE4 | WITHDRAWN | The Effects of Alendronate After Cure of Primary Hyperparathyroidism |
| NCT00379899 | PHASE4 | COMPLETED | ADVANCE: Study to Evaluate Cinacalcet Plus Low Dose Vitamin D on Vascular Calcification in Subjects With Chronic Kidney Disease Receiving Hemodialysis |
| NCT01143987 | PHASE4 | COMPLETED | Cincalcet and Vascular Arterial Stiffness Among Peritoneal Dialysis Patients With Secondary Hyperparathyroidism |
| NCT01573520 | PHASE4 | COMPLETED | Treatment Adhesion in Dialysis Patients Treated With Cinacalcet |
| NCT00006329 | PHASE2/PHASE3 | COMPLETED | Comparison of Two Methods of Parathyroidectomy for Primary Hyperparathyroidism |
| NCT00417612 | PHASE3 | COMPLETED | Effectiveness of Paricalcitol in Reducing Parathyroid Hormone (PTH) Levels in X-linked Hypophosphatemic Rickets |
| NCT00527267 | PHASE3 | COMPLETED | Safety and Efficacy Study of AMG 073 in Hemodialysis Subjects |
| NCT00975000 | PHASE3 | COMPLETED | Treatment of Autonomous Hyperparathyroidism in Post Renal Transplant Recipients |
| NCT01191762 | PHASE3 | COMPLETED | Sevelamer and Secondary Hyperparathyroidism in Chronic Kidney Disease |
| NCT01277510 | PHASE3 | TERMINATED | Pediatric Chronic Kidney Disease Safety and Efficacy |
| NCT02747979 | PHASE2/PHASE3 | COMPLETED | The Effect and Safety of Hemodialysis and Hemoperfusion on Severe Renal Osteopathy and Itching in Uremia Patients |
| NCT04040946 | PHASE3 | COMPLETED | Trial Comparing 2 Diagnostic Strategies for Preoperative Localization of Parathyroid Adenoma in Primary Hyperparathyroidism:TEMP / CT With Tc99m-sestaMIBI or PET / CT With F18-choline in First Intention |
| NCT00001277 | PHASE2 | COMPLETED | Studies of Elevated Parathyroid Activity |
| NCT00744302 | PHASE2 | COMPLETED | Study of 1.25 mmol/L Calcium Dialysate on Mineral Metabolism in Haemodialysis Patients. |
| NCT01656070 | PHASE2 | COMPLETED | Vitamin D Supplementation in HIV-infected Youth |
| NCT01935856 | PHASE1/PHASE2 | COMPLETED | Phase 1/2 Study of KHK7580 for Secondary Hyperparathyroidism in Patients Receiving Hemodialysis |
| NCT02432599 | PHASE2 | COMPLETED | Interest of the F18-choline as a Second Line of the Tracer for Detection of Parathyroid Adenomas |
| NCT00538720 | PHASE1 | COMPLETED | Effects of Vitamin D Replacement in Patients With Primary Hyperparathyroidism (PHPT) |
| NCT00573573 | PHASE1 | UNKNOWN | Energy Specific Far Infrared Radiation Treatment for Hyperparathyroidism |
| NCT01333267 | PHASE1 | WITHDRAWN | One Week Comparison Study of PTH and PTHrP Infusions |
| NCT00377312 | EARLY_PHASE1 | COMPLETED | 7 Day Continuous Parathyroid Hormone IV Infusion |
| NCT00580788 | EARLY_PHASE1 | COMPLETED | One Week Parathyroid Hormone-related Protein (PTHrP) IV Dose Escalation Study |
| NCT02986607 | EARLY_PHASE1 | UNKNOWN | Corticosteroid Rhythms in Hypoparathyroid Patients |
| NCT00169806 | Not specified | ACTIVE_NOT_RECRUITING | Randall’s Plaque Study: Pathogenesis and Relationship to Nephrolithiasis |
| NCT05667090 | Not specified | RECRUITING | Effects of Multiple Mega-dose of Vitamin D3 Supplementation on Ameliorating Moderate to Severe Chronic Pain in Hemodialysis Patients |
| NCT05963841 | Not specified | RECRUITING | NUclear MEdicine DIagnostic and Artificial Intelligence |
| NCT06499142 | Not specified | ACTIVE_NOT_RECRUITING | STP.168 Clinical Study Protocol Parakeet |
| NCT06711874 | Not specified | ACTIVE_NOT_RECRUITING | Abnormally High Parathyroid Hormone Levels Worsens Outcomes in Vitamin D Depleted Critical Care Patients |
| NCT06797934 | Not specified | RECRUITING | Establishment of a Registry of Patients With Parathyroid Disease |
| NCT06852144 | Not specified | ENROLLING_BY_INVITATION | PET-TC in Thyroid Evaluation |
| NCT07010380 | Not specified | RECRUITING | Dual-Channel Near-Infrared Autofluorescence Imaging and AI Analysis to Locate Parathyroid Glands (PTFinder) |
| NCT07083557 | Not specified | RECRUITING | Routine Validation and Reproducibility Testing of Laboratory Assays and Research Techniques Used for Endocrine, Cardiometabolic, and Musculoskeletal Disorder Research (VALD) |
| NCT07103876 | Not specified | RECRUITING | Parathyroidectomy and Mobility Study |
| NCT07415421 | Not specified | RECRUITING | Parathyroidectomy After Kidney Transplantation |
| NCT00004843 | Not specified | COMPLETED | A Randomized Study of Surgery vs No Surgery in Patients With Mild Asymptomatic Primary Hyperparathyroidism |
| NCT00374595 | Not specified | COMPLETED | Vascular Risk After Kidney Transplantation |
| NCT00395902 | Not specified | COMPLETED | Post Transplant Study |
| NCT00452049 | Not specified | UNKNOWN | The Effect of Parathyroidectomy on Renal Function, Endothelial Function, and Blood Pressure |
| NCT00501215 | Not specified | COMPLETED | Effect of Parathyroidectomy on Sleep |
Drugs tested across these trials (top 30)
| Molecule | Max phase | Trials referencing |
|---|---|---|
| CINACALCET | 4 | 12 |
| CHOLECALCIFEROL | 4 | 4 |
| METHYLENE BLUE CATION | 4 | 3 |
| PARATHYROID HORMONE | 4 | 3 |
| LISINOPRIL ANHYDROUS | 4 | 2 |
| AMINOSALICYLIC ACID | 4 | 1 |
| EDOTREOTIDE GALLIUM GA-68 | 4 | 1 |
| FLUORODOPA F 18 | 4 | 1 |
| PARICALCITOL | 4 | 1 |
| RISEDRONIC ACID | 4 | 1 |
| SEVELAMER CARBONATE | 4 | 1 |
| EVOCALCET | 3 | 1 |