Hypophosphatemic rickets
disease diseaseOn this page
Also known as acquired vitamin D resistant ricketsacquired vitamin D-resistant ricketshypophosphatemia, vitamin D-resistant ricketshypophosphatemic Rickethypophosphatemic vitamin D resistant ricketshypophosphatemic vitamin D-resistant ricketsPhosphopenic ricketsRicket, hypophosphatemicrickets, vitamin D resistantrickets, vitamin D-resistantvitamin D-resistant rickets
Summary
Hypophosphatemic rickets (MONDO:0024300) is a disease with 8 cohort genes and 9 clinical trials. Top therapeutic interventions include cinacalcet, burosumab, and calcitriol.
At a glance
- Cohort genes: 8
- ClinVar variants: 34
- Clinical trials: 9
Clinical features
No curated clinical features (Orphanet) for this disease.
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | hypophosphatemic rickets |
| Mondo ID | MONDO:0024300 |
| MeSH | D063730 |
| NCIT | C131449 |
| UMLS | C1704375 |
| MedGen | 309957 |
| GARD | 0025385 |
| Is cancer (heuristic) | no |
Also known as: acquired vitamin D resistant rickets · acquired vitamin D-resistant rickets · hypophosphatemia, vitamin D-resistant rickets · hypophosphatemic Ricket · hypophosphatemic rickets · hypophosphatemic vitamin D resistant rickets · hypophosphatemic vitamin D-resistant rickets · Phosphopenic rickets · Ricket, hypophosphatemic · rickets, vitamin D resistant · rickets, vitamin D-resistant · vitamin D-resistant rickets
Data availability: 34 ClinVar variants · 2 GenCC gene-disease records.
Disease family
An umbrella term covering 1 Mondo subtype.
Classification path: disease › human disease › disease by body system or component › musculoskeletal system disorder › skeletal system disorder › bone disorder › bone remodeling disease › rickets › hypophosphatemic rickets
Related subtypes (3): renal osteodystrophy, hypocalcemic rickets, vitamin D-dependent rickets
Subtypes (1): hereditary hypophosphatemic rickets
Genetics & variants
GWAS landscape
No GWAS associations recorded — common-variant (GWAS) studies don’t cover this disease (typical for Mendelian / rare diseases). See the curated gene cohort and Mendelian overlap below.
Variant details and genetic-evidence tiers
ClinVar germline variants
34 retrieved; paginated sample, class counts are floors:
21 pathogenic, 4 likely pathogenic, 4 conflicting classifications of pathogenicity, 3 uncertain significance, 2 pathogenic/likely pathogenic
| ClinVar | Variant (HGVS) | Gene | Classification | Review |
|---|---|---|---|---|
| 1339444 | NM_004407.4(DMP1):c.2T>A (p.Met1Lys) | DMP1 | Pathogenic | criteria provided, single submitter |
| 36135 | NM_020638.3(FGF23):c.536G>A (p.Arg179Gln) | FGF23 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 1339438 | NM_000444.6(PHEX):c.567_568del (p.Gln189fs) | PHEX | Pathogenic | criteria provided, single submitter |
| 1339439 | NM_000444.6(PHEX):c.652_655del (p.His218fs) | PHEX | Pathogenic | criteria provided, single submitter |
| 1339440 | NM_000444.6(PHEX):c.665_674del | PHEX | Pathogenic | criteria provided, single submitter |
| 1339442 | NM_000444.6(PHEX):c.1965+1del | PHEX | Pathogenic | criteria provided, single submitter |
| 1339443 | NM_000444.6(PHEX):c.1336_1337insAATA (p.Phe446Ter) | PHEX | Pathogenic | criteria provided, single submitter |
| 1339456 | NM_000444.6(PHEX):c.2071-1G>C | PHEX | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 1339458 | NM_000444.6(PHEX):c.1966-1G>A | PHEX | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 1339459 | NM_000444.6(PHEX):c.663+1G>T | PHEX | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 1339460 | NM_000444.6(PHEX):c.1482+2T>A | PHEX | Pathogenic | criteria provided, single submitter |
| 1339461 | NM_000444.6(PHEX):c.826A>T (p.Arg276Ter) | PHEX | Pathogenic | criteria provided, single submitter |
| 1343090 | NM_000444.6(PHEX):c.1970A>G (p.Tyr657Cys) | PHEX | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 279976 | NM_000444.6(PHEX):c.1768+1G>C | PHEX | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 280076 | NM_000444.6(PHEX):c.1601C>T (p.Pro534Leu) | PHEX | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 372454 | NM_000444.6(PHEX):c.871C>T (p.Arg291Ter) | PHEX | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 374096 | NM_000444.6(PHEX):c.2167_2170dup (p.Phe724Ter) | PHEX | Pathogenic | criteria provided, single submitter |
| 419401 | NM_000444.6(PHEX):c.1202del (p.Pro401fs) | PHEX | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 420128 | NM_000444.6(PHEX):c.985dup (p.His329fs) | PHEX | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 438568 | NM_000444.6(PHEX):c.1700+2T>C | PHEX | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 1339441 | NM_000444.6(PHEX):c.1920_1929del (p.Gly641fs) | PTCHD1-AS | Pathogenic | criteria provided, single submitter |
| 280082 | NM_000444.6(PHEX):c.1979G>A (p.Trp660Ter) | PTCHD1-AS | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 1343811 | NM_182758.4(WDR72):c.764_768del (p.Gly255fs) | WDR72 | Pathogenic/Likely pathogenic | no assertion criteria provided |
| 505906 | NM_004407.4(DMP1):c.979C>T (p.Gln327Ter) | DMP1 | Likely pathogenic | criteria provided, single submitter |
| 1339437 | NM_000444.6(PHEX):c.1316T>G (p.Val439Gly) | PHEX | Likely pathogenic | criteria provided, single submitter |
| 1339446 | NM_000444.6(PHEX):c.2048T>A (p.Leu683His) | PHEX | Likely pathogenic | criteria provided, single submitter |
| 1343086 | NM_000444.6(PHEX):c.229T>A (p.Cys77Ser) | PHEX | Likely pathogenic | criteria provided, single submitter |
| 13589 | NM_006208.3(ENPP1):c.517A>C (p.Lys173Gln) | ENPP1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 161093 | NM_006208.3(ENPP1):c.1831C>G (p.Leu611Val) | ENPP1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 1343094 | NM_000444.6(PHEX):c.2188G>T (p.Ala730Ser) | PHEX | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 2 · Orphanet: 15 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
GenCC gene–disease validity (cohort genes)
the Disease column is the GenCC-asserted condition — a cohort gene’s strongest validity may be for a related predisposition syndrome.
| Gene | Classification | Inheritance | Disease | Records |
|---|---|---|---|---|
| SGK3 | Limited | Autosomal dominant | hypophosphatemic rickets | 2 |
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|---|---|
| WDR72 | Orphanet:100033 | Hypomaturation amelogenesis imperfecta |
| WDR72 | Orphanet:402041 | Autosomal recessive distal renal tubular acidosis |
| DMP1 | Orphanet:289176 | Autosomal recessive hypophosphatemic rickets |
| ENPP1 | Orphanet:289176 | Autosomal recessive hypophosphatemic rickets |
| ENPP1 | Orphanet:324561 | Hypopigmentation-punctate palmoplantar keratoderma syndrome |
| ENPP1 | Orphanet:51608 | Generalized arterial calcification of infancy |
| ENPP1 | Orphanet:758 | Pseudoxanthoma elasticum |
| FGF23 | Orphanet:306661 | Familial hyperphosphatemic tumoral calcinosis/Hyperphosphatemic hyperostosis syndrome |
| FGF23 | Orphanet:89937 | Autosomal dominant hypophosphatemic rickets |
| HRAS | Orphanet:146 | Differentiated thyroid carcinoma |
| HRAS | Orphanet:2612 | Linear nevus sebaceus syndrome |
| HRAS | Orphanet:2874 | Phakomatosis pigmentokeratotica |
| HRAS | Orphanet:3071 | Costello syndrome |
| HRAS | Orphanet:79414 | Woolly hair nevus |
| PHEX | Orphanet:89936 | X-linked hypophosphatemia |
Cohort genes → proteins
8 cohort genes, 7 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|---|
| multi_evidence | 8 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|---|---|---|---|---|
| SGK3 | HGNC:10812 | ENSG00000104205 | Q96BR1 | Serine/threonine-protein kinase Sgk3 | gencc |
| WDR72 | HGNC:26790 | ENSG00000166415 | Q3MJ13 | WD repeat-containing protein 72 | clinvar |
| DMP1 | HGNC:2932 | ENSG00000152592 | Q13316 | Dentin matrix acidic phosphoprotein 1 | clinvar |
| ENPP1 | HGNC:3356 | ENSG00000197594 | P22413 | Ectonucleotide pyrophosphatase/phosphodiesterase family member 1 | clinvar |
| FGF23 | HGNC:3680 | ENSG00000118972 | Q9GZV9 | Fibroblast growth factor 23 | clinvar |
| PTCHD1-AS | HGNC:37703 | ENSG00000233067 | PTCHD1 and PHEX antisense RNA | clinvar | |
| HRAS | HGNC:5173 | ENSG00000174775 | P01112 | GTPase HRas | clinvar |
| PHEX | HGNC:8918 | ENSG00000102174 | P78562 | Phosphate-regulating neutral endopeptidase PHEX | clinvar |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|---|---|
| SGK3 | Serine/threonine-protein kinase Sgk3 | Serine/threonine-protein kinase which is involved in the regulation of a wide variety of ion channels, membrane transporters, cell growth, proliferation, survival and migration. |
| WDR72 | WD repeat-containing protein 72 | Plays a major role in formation of tooth enamel. |
| DMP1 | Dentin matrix acidic phosphoprotein 1 | May have a dual function during osteoblast differentiation. |
| ENPP1 | Ectonucleotide pyrophosphatase/phosphodiesterase family member 1 | Nucleotide pyrophosphatase that generates diphosphate (PPi) and functions in bone mineralization and soft tissue calcification by regulating pyrophosphate levels. |
| FGF23 | Fibroblast growth factor 23 | Regulator of phosphate homeostasis. |
| HRAS | GTPase HRas | Involved in the activation of Ras protein signal transduction. |
| PHEX | Phosphate-regulating neutral endopeptidase PHEX | Peptidase that cleaves SIBLING (small integrin-binding ligand, N-linked glycoprotein)-derived ASARM peptides, thus regulating their biological activity. |
Protein-family classification
Druggable: 4 · Difficult: 1 · Unknown: 3 · Druggable fraction: 0.5
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|---|---|---|
| Phosphatase | 1 | 10.5× | 0.509 |
| Protease | 1 | 4.6× | 0.509 |
| Kinase | 1 | 3.5× | 0.509 |
| Scaffold/PPI | 1 | 2.2× | 0.569 |
| Enzyme (other) | 1 | 1.5× | 0.602 |
| Other/Unknown | 3 | 0.7× | 0.919 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|---|---|---|---|
| SGK3 | Kinase | yes | Prot_kinase_dom, AGC-kinase_C, PX_dom | |
| WDR72 | Scaffold/PPI | no | WD40_rpt, WD40/YVTN_repeat-like_dom_sf, WD40_repeat_CS | |
| DMP1 | Other/Unknown | no | DMP1 | |
| ENPP1 | Phosphatase | yes | 3.6.1.9 | Somatomedin_B_dom, Endo_G_ENPP1-like_dom, Phosphodiest/P_Trfase |
| FGF23 | Other/Unknown | no | Fibroblast_GF_fam, IL1/FGF | |
| PTCHD1-AS | Other/Unknown | no | ||
| HRAS | Enzyme (other) | yes | 3.6.5.2 | Small_GTPase, Small_GTP-bd, Small_GTPase_Ras-type |
| PHEX | Protease | yes | 3.4.24.B15 | Peptidase_M13, Peptidase_M13_N, Peptidase_M13_C |
Expression context
Cohort genes with no expression data: 0.
7 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 0 |
| broad (>20) | 8 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|---|
| tibia | 3 |
| corpus callosum | 1 |
| inferior vagus X ganglion | 1 |
| pigmented layer of retina | 1 |
| kidney epithelium | 1 |
| pancreatic ductal cell | 1 |
| renal medulla | 1 |
| male germ line stem cell (sensu Vertebrata) in testis | 1 |
| periodontal ligament | 1 |
| cartilage tissue | 1 |
| decidua | 1 |
| hair follicle | 1 |
| primordial germ cell in gonad | 1 |
| sural nerve | 1 |
| bone marrow cell | 1 |
| ganglionic eminence | 1 |
| pancreas | 1 |
| skin of abdomen | 1 |
| skin of leg | 1 |
| zone of skin | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|---|---|---|---|
| SGK3 | 251 | tissue_specific | marker | pigmented layer of retina, corpus callosum, inferior vagus X ganglion |
| WDR72 | 139 | tissue_specific | marker | kidney epithelium, pancreatic ductal cell, renal medulla |
| DMP1 | 40 | tissue_specific | marker | periodontal ligament, tibia, male germ line stem cell (sensu Vertebrata) in testis |
| ENPP1 | 227 | ubiquitous | marker | tibia, decidua, cartilage tissue |
| FGF23 | 44 | tissue_specific | marker | sural nerve, primordial germ cell in gonad, hair follicle |
| PTCHD1-AS | 75 | yes | bone marrow cell, ganglionic eminence, pancreas | |
| HRAS | 139 | ubiquitous | marker | skin of abdomen, skin of leg, zone of skin |
| PHEX | 139 | tissue_specific | marker | secondary oocyte, tibia, oocyte |
Protein interactions among cohort
Intra-cohort edges: 5.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|---|
| HRAS | 8,064 |
| ENPP1 | 1,911 |
| SGK3 | 1,828 |
| FGF23 | 1,533 |
| WDR72 | 1,126 |
| PHEX | 856 |
| DMP1 | 850 |
| PTCHD1-AS | 0 |
Intra-cohort edges
| A | B | Sources |
|---|---|---|
| DMP1 | FGF23 | string_interaction |
| DMP1 | PHEX | string_interaction |
| ENPP1 | FGF23 | string_interaction |
| ENPP1 | PHEX | string_interaction |
| FGF23 | PHEX | string_interaction |
Structural data
PDB: 4 · AlphaFold-only: 3 · No structure: 1
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|---|---|
| HRAS | P01112 | 246 |
| ENPP1 | P22413 | 7 |
| FGF23 | Q9GZV9 | 6 |
| SGK3 | Q96BR1 | 1 |
AlphaFold-only cohort genes (top 30 by pLDDT)
| Symbol | UniProt | pLDDT |
|---|---|---|
| PHEX | P78562 | 94.58 |
| WDR72 | Q3MJ13 | 67.22 |
| DMP1 | Q13316 | 47.80 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 102. Enrichment computed across 8 evidence-associated genes (5 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 5 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| SHC-mediated cascade:FGFR3 | 2 | 240.4× | 6e-04 | FGF23, HRAS |
| FRS-mediated FGFR3 signaling | 2 | 217.5× | 6e-04 | FGF23, HRAS |
| SHC-mediated cascade:FGFR4 | 2 | 217.5× | 6e-04 | FGF23, HRAS |
| SHC-mediated cascade:FGFR1 | 2 | 198.6× | 6e-04 | FGF23, HRAS |
| FRS-mediated FGFR4 signaling | 2 | 198.6× | 6e-04 | FGF23, HRAS |
| Signaling by FGFR3 in disease | 2 | 198.6× | 6e-04 | FGF23, HRAS |
| SHC-mediated cascade:FGFR2 | 2 | 190.3× | 6e-04 | FGF23, HRAS |
| FRS-mediated FGFR1 signaling | 2 | 182.7× | 6e-04 | FGF23, HRAS |
| FRS-mediated FGFR2 signaling | 2 | 175.7× | 6e-04 | FGF23, HRAS |
| Signaling by FGFR1 in disease | 2 | 117.1× | 0.001 | FGF23, HRAS |
| Signaling by FGFR2 in disease | 2 | 106.2× | 0.001 | FGF23, HRAS |
| Post-translational protein phosphorylation | 2 | 40.1× | 0.008 | DMP1, FGF23 |
| Signaling by RAS GAP mutants | 1 | 761.3× | 0.009 | HRAS |
| Signaling by RAS GTPase mutants | 1 | 761.3× | 0.009 | HRAS |
| Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs) | 2 | 34.6× | 0.009 | DMP1, FGF23 |
| FGFR1c and Klotho ligand binding and activation | 1 | 571.0× | 0.011 | FGF23 |
| Activation of RAS in B cells | 1 | 456.8× | 0.013 | HRAS |
| Vitamin B2 (riboflavin) metabolism | 1 | 326.3× | 0.014 | ENPP1 |
| RAS signaling downstream of NF1 loss-of-function variants | 1 | 326.3× | 0.014 | HRAS |
| Estrogen-stimulated signaling through PRKCZ | 1 | 326.3× | 0.014 | HRAS |
| SOS-mediated signalling | 1 | 285.5× | 0.014 | HRAS |
| Activated NTRK3 signals through RAS | 1 | 253.8× | 0.014 | HRAS |
| EGFR Transactivation by Gastrin | 1 | 228.4× | 0.014 | HRAS |
| SHC-related events triggered by IGF1R | 1 | 228.4× | 0.014 | HRAS |
| Activated NTRK2 signals through RAS | 1 | 228.4× | 0.014 | HRAS |
| MET activates RAS signaling | 1 | 207.6× | 0.014 | HRAS |
| Signaling by activated point mutants of FGFR1 | 1 | 190.3× | 0.014 | FGF23 |
| Signaling by activated point mutants of FGFR3 | 1 | 190.3× | 0.014 | FGF23 |
| Signaling by FGFR4 in disease | 1 | 190.3× | 0.014 | HRAS |
| Activated NTRK2 signals through FRS2 and FRS3 | 1 | 190.3× | 0.014 | HRAS |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 7 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| response to sodium phosphate | 2 | 481.5× | 3e-04 | FGF23, PHEX |
| intracellular phosphate ion homeostasis | 2 | 437.7× | 3e-04 | ENPP1, FGF23 |
| cellular response to vitamin D | 2 | 437.7× | 3e-04 | FGF23, PHEX |
| cellular response to parathyroid hormone stimulus | 2 | 401.2× | 3e-04 | FGF23, PHEX |
| phosphate ion homeostasis | 2 | 300.9× | 4e-04 | ENPP1, FGF23 |
| negative regulation of bone mineralization | 2 | 267.5× | 4e-04 | ENPP1, FGF23 |
| biomineral tissue development | 2 | 185.2× | 7e-04 | WDR72, DMP1 |
| bone mineralization | 2 | 77.7× | 0.004 | ENPP1, PHEX |
| obsolete positive regulation of vitamin D 24-hydroxylase activity | 1 | 2407.4× | 0.004 | FGF23 |
| organophosphate metabolic process | 1 | 2407.4× | 0.004 | PHEX |
| obsolete negative regulation of hh target transcription factor activity | 1 | 2407.4× | 0.004 | ENPP1 |
| inorganic diphosphate transport | 1 | 1203.7× | 0.007 | ENPP1 |
| regulation of phosphate transport | 1 | 802.5× | 0.009 | FGF23 |
| regulation of enamel mineralization | 1 | 802.5× | 0.009 | DMP1 |
| positive regulation of miRNA metabolic process | 1 | 802.5× | 0.009 | HRAS |
| regulation of cell population proliferation | 2 | 33.0× | 0.010 | SGK3, HRAS |
| vitamin D catabolic process | 1 | 601.9× | 0.010 | FGF23 |
| nucleoside triphosphate catabolic process | 1 | 481.5× | 0.012 | ENPP1 |
| positive regulation of MAPKKK cascade by fibroblast growth factor receptor signaling pathway | 1 | 401.2× | 0.012 | FGF23 |
| nucleic acid metabolic process | 1 | 401.2× | 0.012 | ENPP1 |
| response to insulin-like growth factor stimulus | 1 | 401.2× | 0.012 | PHEX |
| positive regulation of ERK1 and ERK2 cascade | 2 | 24.3× | 0.013 | FGF23, HRAS |
| oncogene-induced cell senescence | 1 | 343.9× | 0.013 | HRAS |
| positive regulation of MAPK cascade | 2 | 23.0× | 0.013 | FGF23, HRAS |
| negative regulation of glycogen biosynthetic process | 1 | 300.9× | 0.014 | ENPP1 |
| T-helper 1 type immune response | 1 | 267.5× | 0.014 | HRAS |
| negative regulation of hormone secretion | 1 | 267.5× | 0.014 | FGF23 |
| cellular response to leptin stimulus | 1 | 218.9× | 0.017 | FGF23 |
| response to magnesium ion | 1 | 200.6× | 0.018 | FGF23 |
| negative regulation of D-glucose import across plasma membrane | 1 | 172.0× | 0.019 | ENPP1 |
Therapeutics
Drugs indicated or in trials for this disease
1 approved drug — disease-direct ChEMBL indications, not inferred from the associated-gene cohort below.
| Drug | Status |
|---|---|
| Ergocalciferol | Approved (phase 4) |
1 drug in clinical trials for this disease (phase 2–3, investigational): efficacy not established — a trial record, not an indication.
| Drug | Highest phase |
|---|---|
| Burosumab | Phase 3 |
Drug target analysis
Approved (phase 4): 2 · Phase ≥3: 3 · Phased (≥1): 3 · Undrugged: 5
Druggability breadth: 4 of 8 evidence-associated genes (50%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Genes with an approved drug
The molecule shown is one approved compound that hits the gene — not necessarily a drug of choice or one indicated for this disease.
| Symbol | Example approved molecule |
|---|---|
| SGK3 | FEDRATINIB |
| HRAS | LONAFARNIB |
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|---|---|
| SGK3 | 13 | 4 |
| HRAS | 4 | 4 |
| ENPP1 | 1 | 3 |
| WDR72 | 0 | 0 |
| DMP1 | 0 | 0 |
| FGF23 | 0 | 0 |
| PTCHD1-AS | 0 | 0 |
| PHEX | 0 | 0 |
Drugs targeting cohort genes (top 30)
| Molecule | Max phase | Targets in cohort |
|---|---|---|
| FEDRATINIB | 4 | SGK3 |
| NINTEDANIB | 4 | SGK3 |
| SUNITINIB | 4 | SGK3 |
| MIDOSTAURIN | 4 | SGK3 |
| LONAFARNIB | 4 | HRAS |
| LINIFANIB | 3 | SGK3 |
| DOVITINIB | 3 | SGK3 |
| LESTAURTINIB | 3 | SGK3 |
| RUBOXISTAURIN | 3 | SGK3 |
| SURAMIN | 3 | ENPP1 |
| SU-014813 | 2 | SGK3 |
| STALLIMYCIN | 2 | HRAS |
| KW-2449 | 1 | SGK3 |
| AT-13148 | 1 | SGK3 |
| GSK-690693 | 1 | SGK3 |
| AST-487 | 1 | SGK3 |
| L-778123 FREE BASE | 1 | HRAS |
| BMS-214662 | 1 | HRAS |
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 3.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|---|---|
| SGK3 | 265 | Binding:264, Functional:1 |
| ENPP1 | 167 | Binding:154, ADMET:13 |
| HRAS | 48 | Binding:45, Functional:3 |
| FGF23 | 2 | Binding:2 |
Cohort enzymes (BRENDA EC)
| Symbol | EC numbers | Names |
|---|---|---|
| ENPP1 | 3.6.1.9 | nucleotide diphosphatase |
| HRAS | 3.6.5.2 | small monomeric GTPase |
| PHEX | 3.4.24.B15 |
Cohort genes with high screening signal
≥100 ChEMBL assays — a studied-ness signal; see Therapeutics for approved-drug status.
| Symbol | ChEMBL assays |
|---|---|
| SGK3 | 265 |
| ENPP1 | 167 |
Pharmacogenomics
Cohort genes with a PharmGKB record: 7; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Chemical tractability of cohort targets
18 approved/phased compounds have measured bioactivity against a cohort gene (and aren’t yet in disease-level trials). This is a research / tractability signal, NOT a therapeutic recommendation — a bioactivity row often reflects off-target or screening binding (e.g. promiscuous kinase inhibitors against a cohort kinase), implying no disease mechanism.
| Compound | Max phase | Cohort target (bioactivity) |
|---|---|---|
| FEDRATINIB | 4 | SGK3 |
| NINTEDANIB | 4 | SGK3 |
| SUNITINIB | 4 | SGK3 |
| MIDOSTAURIN | 4 | SGK3 |
| LONAFARNIB | 4 | HRAS |
| LINIFANIB | 3 | SGK3 |
| DOVITINIB | 3 | SGK3 |
| LESTAURTINIB | 3 | SGK3 |
| RUBOXISTAURIN | 3 | SGK3 |
| SURAMIN | 3 | ENPP1 |
| SU-014813 | 2 | SGK3 |
| STALLIMYCIN | 2 | HRAS |
| KW-2449 | 1 | SGK3 |
| AT-13148 | 1 | SGK3 |
| GSK-690693 | 1 | SGK3 |
| AST-487 | 1 | SGK3 |
| L-778123 FREE BASE | 1 | HRAS |
| BMS-214662 | 1 | HRAS |
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|---|---|---|
| A | Approved (phase 4 drug) | 2 | SGK3, HRAS |
| B | Phased (≥1) drug, not yet approved | 1 | ENPP1 |
| C | Druggable family + PDB, no drug | 0 | |
| D | Druggable family + AlphaFold only, no drug | 1 | PHEX |
| E | Difficult family or no structure, no drug | 4 | WDR72, DMP1, FGF23, PTCHD1-AS |
Undrugged target profiles
5 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
| Symbol | ChEMBL assays | Drugged partners (top 3) |
|---|---|---|
| PHEX | 0 | ENPP1 |
| WDR72 | 0 | — |
| DMP1 | 0 | — |
| FGF23 | 2 | — |
| PTCHD1-AS | 0 | — |
Clinical trials & evidence
Clinical trials
Clinical trials: 9.
Phase distribution (across all retrieved trials)
| Phase | Trials |
|---|---|
| Not specified | 5 |
| PHASE3 | 2 |
| PHASE1 | 1 |
| EARLY_PHASE1 | 1 |
Top trials by phase / activity
| NCT | Phase | Status | Title |
|---|---|---|---|
| NCT01237288 | PHASE3 | COMPLETED | Therapeutic Use of Oral Sodium Phosphate (Z-521) in Primary Hypophosphatemic Rickets |
| NCT03581591 | PHASE3 | COMPLETED | Open Label Trial Assessing Safety and Efficacy of Burosumab (KRN23), in a Patient With ENS and Hypophosphatemic Rickets |
| NCT00473187 | PHASE1 | UNKNOWN | Effects of GH on Body Proportions and Final Height in X-Linked Hypophosphatemic Rickets |
| NCT03748966 | EARLY_PHASE1 | COMPLETED | Calcitriol Monotherapy for X-Linked Hypophosphatemia |
| NCT03651505 | Not specified | ACTIVE_NOT_RECRUITING | X-linked Hypophosphatemia Disease Monitoring Program |
| NCT00844740 | Not specified | WITHDRAWN | Calcimimetics in Hypophosphatemic Rickets |
| NCT01578824 | Not specified | COMPLETED | Assessment Of Vitamin D Role In The Pathogenesis Of Asthma In Vitamin D Resistent Patients |
| NCT03348644 | Not specified | COMPLETED | Milk Products in the Treatment of Hypophosphatemic Rickets |
| NCT04184661 | Not specified | COMPLETED | Burosumab and 1-25 (OH) Vitamin D on Human Osteoclasts |
Drugs tested across these trials (top 30)
| Molecule | Max phase | Trials referencing |
|---|---|---|
| CINACALCET | 4 | 3 |
| BUROSUMAB | 4 | 1 |
| CALCITRIOL | 4 | 1 |
| SOMATROPIN | 4 | 1 |
Related Atlas pages
- Cohort genes: SGK3, WDR72, DMP1, ENPP1, FGF23, PTCHD1-AS, HRAS, PHEX
- Drugs: Cinacalcet, Burosumab, Calcitriol, Somatropin