Intellectual developmental disorder with dysmorphic facies, seizures, and distal limb anomalies
diseaseOn this page
Also known as IDDFSDA
Summary
Intellectual developmental disorder with dysmorphic facies, seizures, and distal limb anomalies (MONDO:0044319) is a disease caused by OTUD6B (GenCC Strong), with 2 cohort genes.
At a glance
- Prevalence: <1 / 1 000 000 (Worldwide) [Orphanet-validated]
- Causal gene: OTUD6B (GenCC Strong)
- Cohort genes: 2
- ClinVar variants: 34
- Phenotypes (HPO): 53
Clinical features
Epidemiology
Prevalence records
2 prevalence record(s), Orphanet:
| Type | Class | Value | Geography | Validation |
|---|---|---|---|---|
| Cases/families | 12 | Worldwide | Validated | |
| Point prevalence | <1 / 1 000 000 | Worldwide | Validated |
Signs & symptoms
Clinical features (HPO)
53 HPO clinical features (Orphanet curated; top 50 by frequency):
| HPO ID | Term | Frequency |
|---|---|---|
| HP:0001250 | Seizure | Very frequent (80-99%) |
| HP:0010864 | Intellectual disability, severe | Very frequent (80-99%) |
| HP:0000218 | High palate | Frequent (30-79%) |
| HP:0000219 | Thin upper lip vermilion | Frequent (30-79%) |
| HP:0000248 | Brachycephaly | Frequent (30-79%) |
| HP:0000252 | Microcephaly | Frequent (30-79%) |
| HP:0000276 | Long face | Frequent (30-79%) |
| HP:0000278 | Retrognathia | Frequent (30-79%) |
| HP:0000343 | Long philtrum | Frequent (30-79%) |
| HP:0000365 | Hearing impairment | Frequent (30-79%) |
| HP:0000369 | Low-set ears | Frequent (30-79%) |
| HP:0000400 | Macrotia | Frequent (30-79%) |
| HP:0000426 | Prominent nasal bridge | Frequent (30-79%) |
| HP:0000445 | Wide nose | Frequent (30-79%) |
| HP:0000470 | Short neck | Frequent (30-79%) |
| HP:0000494 | Downslanted palpebral fissures | Frequent (30-79%) |
| HP:0000527 | Long eyelashes | Frequent (30-79%) |
| HP:0000637 | Long palpebral fissure | Frequent (30-79%) |
| HP:0000960 | Sacral dimple | Frequent (30-79%) |
| HP:0001182 | Tapered finger | Frequent (30-79%) |
| HP:0001187 | Hyperextensibility of the finger joints | Frequent (30-79%) |
| HP:0001263 | Global developmental delay | Frequent (30-79%) |
| HP:0001290 | Generalized hypotonia | Frequent (30-79%) |
| HP:0001344 | Absent speech | Frequent (30-79%) |
| HP:0001508 | Failure to thrive | Frequent (30-79%) |
| HP:0001511 | Intrauterine growth retardation | Frequent (30-79%) |
| HP:0001762 | Talipes equinovarus | Frequent (30-79%) |
| HP:0001845 | Overlapping toe | Frequent (30-79%) |
| HP:0002119 | Ventriculomegaly | Frequent (30-79%) |
| HP:0002540 | Inability to walk | Frequent (30-79%) |
| HP:0002553 | Highly arched eyebrow | Frequent (30-79%) |
| HP:0002650 | Scoliosis | Frequent (30-79%) |
| HP:0003121 | Limb joint contracture | Frequent (30-79%) |
| HP:0004322 | Short stature | Frequent (30-79%) |
| HP:0004325 | Decreased body weight | Frequent (30-79%) |
| HP:0005469 | Flat occiput | Frequent (30-79%) |
| HP:0007370 | Aplasia/Hypoplasia of the corpus callosum | Frequent (30-79%) |
| HP:0011304 | Broad thumb | Frequent (30-79%) |
| HP:0011968 | Feeding difficulties | Frequent (30-79%) |
| HP:0000028 | Cryptorchidism | Occasional (5-29%) |
| HP:0000729 | Autistic behavior | Occasional (5-29%) |
| HP:0001166 | Arachnodactyly | Occasional (5-29%) |
| HP:0001251 | Ataxia | Occasional (5-29%) |
| HP:0001257 | Spasticity | Occasional (5-29%) |
| HP:0001276 | Hypertonia | Occasional (5-29%) |
| HP:0001629 | Ventricular septal defect | Occasional (5-29%) |
| HP:0001631 | Atrial septal defect | Occasional (5-29%) |
| HP:0001770 | Toe syndactyly | Occasional (5-29%) |
| HP:0002120 | Cerebral cortical atrophy | Occasional (5-29%) |
| HP:0002510 | Spastic tetraplegia | Occasional (5-29%) |
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | intellectual developmental disorder with dysmorphic facies, seizures, and distal limb anomalies |
| Mondo ID | MONDO:0044319 |
| OMIM | 617452 |
| Orphanet | 505237 |
| UMLS | C4479520 |
| MedGen | 1375601 |
| GARD | 0017942 |
| Is cancer (heuristic) | no |
Also known as: IDDFSDA · intellectual developmental disorder with dysmorphic facies, seizures, and distal limb anomalies
Data availability: 34 ClinVar variants · 2 GenCC gene-disease records.
Disease family
Classification path: disease › human disease › disease by body system or component › nervous system disorder › congenital nervous system disorder › intellectual developmental disorder with dysmorphic facies, seizures, and distal limb anomalies
Related subtypes (216): polymicrogyria, congenital myasthenic syndrome with tubular aggregates, prenatal-onset spinal muscular atrophy with congenital bone fractures, anencephaly, cerebral cavernous malformation, meningocele, progressive external ophthalmoplegia, congenital nystagmus, congenital toxoplasmosis, congenital contractural arachnodactyly, congenital trigeminal anesthesia, familial congenital palsy of trochlear nerve, Myhre syndrome, Aase-Smith syndrome, KBG syndrome, autosomal dominant primary microcephaly, Mobius syndrome, MYH7-related skeletal myopathy, congenital stationary night blindness autosomal dominant 2, Prader-Willi syndrome, congenital myopathy 7A, myosin storage, autosomal dominant, Smith-Magenis syndrome, spina bifida, Freeman-Sheldon syndrome, isolated cerebellar hypoplasia/agenesis, Chediak-Higashi syndrome, Cohen syndrome, multiple pterygium-malignant hyperthermia syndrome, corpus callosum, agenesis of, congenital lactic acidosis, Saguenay-Lac-Saint-Jean type, facial dysmorphism-macrocephaly-myopia-Dandy-Walker malformation syndrome, diastematomyelia, EEM syndrome, Mowat-Wilson syndrome, Johanson-Blizzard syndrome, intellectual disability, Buenos-Aires type, myasthenia, congenital, refractory to acetylcholinesterase inhibitors, congenital myasthenic syndrome 6, Bailey-Bloch congenital myopathy, congenital stationary night blindness 1B, radioulnar synostosis-developmental delay-hypotonia syndrome, Schinzel-Giedion syndrome, schizencephaly, intellectual disability, Wolff type, X-linked intellectual disability-plagiocephaly syndrome, X-linked adrenal hypoplasia congenita, syndromic X-linked intellectual disability 7, syndromic X-linked intellectual disability Shashi type, syndromic X-linked intellectual disability Lubs type, syndromic X-linked intellectual disability Abidi type, syndromic X-linked intellectual disability Siderius type, X-linked intellectual disability, Cabezas type, X-linked intellectual disability-cubitus valgus-dysmorphism syndrome, syndromic X-linked intellectual disability Claes-Jensen type, moyamoya angiopathy-short stature-facial dysmorphism-hypergonadotropic hypogonadism syndrome, multiple congenital anomalies-hypotonia-seizures syndrome 2, developmental and epileptic encephalopathy, 36, blepharophimosis - intellectual disability syndrome, MKB type, X-linked intellectual disability-short stature-overweight syndrome, intellectual disability, X-linked, syndromic 33, syndromic X-linked intellectual disability 34, infantile-onset X-linked spinal muscular atrophy, syndromic X-linked intellectual disability 5, holoprosencephaly-hypokinesia-congenital contractures syndrome, X-linked intellectual disability with marfanoid habitus, Wieacker-Wolff syndrome, MERRF syndrome, macrocephaly-spastic paraplegia-dysmorphism syndrome, intellectual disability-sparse hair-brachydactyly syndrome, myofibrillar myopathy 1, isolated hereditary congenital facial paralysis, fibrosis of extraocular muscles, congenital, 2, Pierpont syndrome, congenital cataracts-facial dysmorphism-neuropathy syndrome, Bohring-Opitz syndrome, PHACE syndrome, B4GALT1-congenital disorder of glycosylation, developmental malformations-deafness-dystonia syndrome, sensory ataxic neuropathy, dysarthria, and ophthalmoparesis, AICA-ribosiduria, myofibrillar myopathy 3, fibrosis of extraocular muscles, congenital, 3c, myofibrillar myopathy 4, myofibrillar myopathy 5, cone-rod synaptic disorder, congenital nonprogressive, congenital stationary night blindness autosomal dominant 3, congenital stationary night blindness autosomal dominant 1, intellectual disability, autosomal recessive 12, progressive myoclonic epilepsy type 3, chromosome 15q13.3 microdeletion syndrome, combined pituitary hormone deficiencies, genetic form, congenital stationary night blindness 1D, DYRK1A-related intellectual disability syndrome, Pitt-Hopkins-like syndrome 2, developmental and epileptic encephalopathy, 15, Schuurs-Hoeijmakers syndrome, severe intellectual disability-poor language-strabismus-grimacing face-long fingers syndrome, severe intellectual disability-progressive spastic diplegia syndrome, hypotonia, infantile, with psychomotor retardation and characteristic facies, developmental and epileptic encephalopathy, 18, CTCF-related neurodevelopmental disorder, autism spectrum disorder due to AUTS2 deficiency, developmental and epileptic encephalopathy, 23, ADNP-related multiple congenital anomalies - intellectual disability - autism spectrum disorder, Bardet-Biedl syndrome 11, cerebellar-facial-dental syndrome, fibrosis of extraocular muscles, congenital, 5, congenital myasthenic syndrome 15, lethal fetal cerebrorenogenitourinary agenesis/hypoplasia syndrome, autosomal dominant intellectual disability-craniofacial anomalies-cardiac defects syndrome, congenital myasthenic syndrome 18, autosomal recessive spinocerebellar ataxia 20, Houge-Janssens syndrome 1, intellectual disability-microcephaly-strabismus-behavioral abnormalities syndrome, congenital stationary night blindness 1G, hypomyelinating leukodystrophy 10, developmental and epileptic encephalopathy, 50, congenital insensitivity to pain-hypohidrosis syndrome, macrocephaly-intellectual disability-neurodevelopmental disorder-small thorax syndrome, SLC39A8-CDG, spastic paraplegia-severe developmental delay-epilepsy syndrome, cardiac anomalies - developmental delay - facial dysmorphism syndrome, severe intellectual disability-corpus callosum agenesis-facial dysmorphism-cerebellar ataxia syndrome, intellectual disability, autosomal recessive 53, TELO2-related intellectual disability-neurodevelopmental disorder, micrognathia-recurrent infections-behavioral abnormalities-mild intellectual disability syndrome, autosomal recessive limb-girdle muscular dystrophy type 2Y, myofibrillar myopathy 7, short stature-brachydactyly-obesity-global developmental delay syndrome, autosomal recessive limb-girdle muscular dystrophy type 2R1, severe microbrachycephaly-intellectual disability-athetoid cerebral palsy syndrome, congenital laryngeal palsy, congenital or early infantile CACH syndrome, congenital epulis, severe congenital nemaline myopathy, intermediate nemaline myopathy, typical nemaline myopathy, childhood-onset nemaline myopathy, adult-onset nemaline myopathy, qualitative or quantitative defects of protein involved in O-glycosylation of alpha-dystroglycan, holoprosencephaly, congenital insensitivity to pain with hyperhidrosis, congenital hydrocephalus, familial congenital mirror movements, macrocephaly-short stature-paraplegia syndrome, cephalocele, mitochondrial neurogastrointestinal encephalomyopathy, X-linked intellectual disability-hypogonadism-ichthyosis-obesity-short stature syndrome, 7p22.1 microduplication syndrome, congenital achiasma, congenital retinal arteriovenous communication, 3q27.3 microdeletion syndrome, Prader-Willi-like syndrome, 9q31.1q31.3 microdeletion syndrome, congenital oculomotor nerve palsy, congenital abducens nerve palsy, neurodevelopmental disorder-craniofacial dysmorphism-cardiac defect-hip dysplasia syndrome, congenital insensitivity to pain with severe intellectual disability, X-linked intellectual disability-cerebellar hypoplasia-spondylo-epiphyseal dysplasia syndrome, global developmental delay-visual anomalies-progressive cerebellar atrophy-truncal hypotonia syndrome, lissencephaly spectrum disorders, hyaline body myopathy, 22q11.2 deletion syndrome, craniorachischisis, Leber congenital amaurosis, Ritscher-Schinzel syndrome, Rubinstein-Taybi syndrome, X-linked intellectual disability-hypogammaglobulinemia-progressive neurological deterioration syndrome, X-linked intellectual disability-epilepsy-progressive joint contractures-dysmorphism syndrome, X-linked intellectual disability, Pai type, X-linked intellectual disability, Stevenson type, X-linked intellectual disability, Stoll type, congenital muscular dystrophy, congenital vitreoretinal dysplasia, periventricular nodular heterotopia, postsynaptic congenital myasthenic syndrome, subcortical band heterotopia, congenital fibrosis of extraocular muscles type 1, Al Gazali Khidr Prem Chandran syndrome, distal arthrogryposis Moore weaver type, congenital myotonic dystrophy, myasthenic syndrome, congenital, 7B, presynaptic, autosomal recessive, intellectual disability, autosomal dominant 47, intellectual disability, autosomal dominant 48, spondyloepiphyseal dysplasia, sensorineural hearing loss, impaired intellectual development, and leber congenital amaurosis, myasthenic syndrome, congenital, 23, presynaptic, myasthenic syndrome, congenital, 24, presynaptic, myasthenic syndrome, congenital, 25, presynaptic, developmental and epileptic encephalopathy, 77, night blindness, congenital stationary, type1i, neuropathy, congenital hypomelinating, congenital axonal neuropathy with encephalopathy, developmental and epileptic encephalopathy, 73, PHIP-related behavioral problems-intellectual disability-obesity-dysmorphic features syndrome, isolated exencephaly, myasthenic syndrome, congenital, 22, intellectual developmental disorder with gastrointestinal difficulties and high pain threshold, 9q33.3q34.11 microdeletion syndrome, congenital labioscrotal agenesis-cerebellar malformation-corneal dystrophy-facial dysmorphism syndrome, early-onset progressive diffuse brain atrophy-microcephaly-muscle weakness-optic atrophy syndrome, SIN3A-related intellectual disability syndrome, childhood-onset motor and cognitive regression syndrome with extrapyramidal movement disorder, X-linked congenital stationary night blindness, neurodevelopmental disorder with progressive microcephaly, spasticity, and brain anomalies, FOXG1 disorder, alpha-actinopathy, TPM3-related myopathy, X-linked recessive mitochondrial myopathy, RYR1-related myopathy, TTN-related myopathy, TPM2-related myopathy, myopathy caused by variation in POMGNT1, central hypoventilation syndrome, congenital, 1, with or without Hirschsprung disease, segmental spinal dysgenesis, myopathy, myofibrillar, 13, with rimmed vacuoles, congenital neuronal ceroid lipofuscinosis 10
Genetics & variants
GWAS landscape
No GWAS associations recorded — common-variant (GWAS) studies don’t cover this disease (typical for Mendelian / rare diseases). See the curated gene cohort and Mendelian overlap below.
Variant details and genetic-evidence tiers
ClinVar germline variants
34 retrieved; paginated sample, class counts are floors:
11 uncertain significance, 8 pathogenic, 5 conflicting classifications of pathogenicity, 5 likely pathogenic, 2 benign, 2 pathogenic/likely pathogenic, 1 not provided
| ClinVar | Variant (HGVS) | Gene | Classification | Review |
|---|---|---|---|---|
| 1029424 | NM_016023.5(OTUD6B):c.631G>T (p.Glu211Ter) | OTUD6B | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 1333287 | NM_016023.5(OTUD6B):c.192_195del (p.Glu65fs) | OTUD6B | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 1334799 | NM_016023.5(OTUD6B):c.527_528del (p.Val176fs) | OTUD6B | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 2627380 | NM_016023.5(OTUD6B):c.381_388del (p.Leu127fs) | OTUD6B | Pathogenic | criteria provided, single submitter |
| 3341105 | NM_016023.5(OTUD6B):c.83-1del | OTUD6B | Pathogenic | criteria provided, single submitter |
| 375701 | NM_016023.5(OTUD6B):c.343C>T (p.Arg115Ter) | OTUD6B | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 375702 | NM_016023.5(OTUD6B):c.379_383del (p.Leu127fs) | OTUD6B | Pathogenic | criteria provided, single submitter |
| 375703 | NM_016023.5(OTUD6B):c.83-2A>G | OTUD6B | Pathogenic | criteria provided, single submitter |
| 4687388 | NM_016023.5(OTUD6B):c.287del (p.Pro96fs) | OTUD6B | Pathogenic | criteria provided, single submitter |
| 967815 | NM_016023.5(OTUD6B):c.189_190del (p.His63fs) | OTUD6B | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 1324839 | NM_016023.5(OTUD6B):c.481A>T (p.Lys161Ter) | OTUD6B | Likely pathogenic | criteria provided, single submitter |
| 1335813 | NM_016023.5(OTUD6B):c.731T>G (p.Ile244Arg) | OTUD6B | Likely pathogenic | no assertion criteria provided |
| 1810274 | NM_016023.5(OTUD6B):c.401A>G (p.Glu134Gly) | OTUD6B | Likely pathogenic | criteria provided, single submitter |
| 375704 | NM_016023.5(OTUD6B):c.557A>G (p.Tyr186Cys) | OTUD6B | Likely pathogenic | criteria provided, single submitter |
| 559925 | NM_016023.5(OTUD6B):c.686T>C (p.Leu229Pro) | OTUD6B | Likely pathogenic | criteria provided, single submitter |
| 1033385 | NM_016023.5(OTUD6B):c.-15G>A | OTUD6B | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 1388293 | NM_016023.5(OTUD6B):c.839C>T (p.Ser280Leu) | OTUD6B | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 708377 | NM_016023.5(OTUD6B):c.658G>A (p.Val220Ile) | OTUD6B | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 711501 | NM_016023.5(OTUD6B):c.-39A>G | OTUD6B | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 711502 | NM_016023.5(OTUD6B):c.389C>A (p.Ala130Asp) | OTUD6B | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 4056699 | NM_016023.5(OTUD6B):c.54G>C (p.Arg18Ser) | LOC130000726 | Uncertain significance | criteria provided, single submitter |
| 1330413 | NM_016023.5(OTUD6B):c.550G>A (p.Ala184Thr) | OTUD6B | Uncertain significance | criteria provided, multiple submitters, no conflicts |
| 1339067 | NM_016023.5(OTUD6B):c.677G>T (p.Gly226Val) | OTUD6B | Uncertain significance | criteria provided, single submitter |
| 2434531 | NM_016023.5(OTUD6B):c.316-1622G>A | OTUD6B | Uncertain significance | criteria provided, multiple submitters, no conflicts |
| 3061832 | NM_016023.5(OTUD6B):c.776C>A (p.Ser259Ter) | OTUD6B | Uncertain significance | criteria provided, single submitter |
| 3061834 | NM_016023.5(OTUD6B):c.692T>C (p.Leu231Pro) | OTUD6B | Uncertain significance | criteria provided, single submitter |
| 3064925 | NM_016023.5(OTUD6B):c.691C>G (p.Leu231Val) | OTUD6B | Uncertain significance | criteria provided, single submitter |
| 3341106 | NM_016023.5(OTUD6B):c.479A>G (p.Tyr160Cys) | OTUD6B | Uncertain significance | criteria provided, single submitter |
| 3391306 | NM_016023.5(OTUD6B):c.326C>G (p.Ala109Gly) | OTUD6B | Uncertain significance | criteria provided, single submitter |
| 3595949 | NM_016023.5(OTUD6B):c.189T>G (p.His63Gln) | OTUD6B | Uncertain significance | criteria provided, single submitter |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 2 · Orphanet: 1 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
GenCC gene–disease validity (cohort genes)
the Disease column is the GenCC-asserted condition — a cohort gene’s strongest validity may be for a related predisposition syndrome.
| Gene | Classification | Inheritance | Disease | Records |
|---|---|---|---|---|
| OTUD6B | Strong | Autosomal recessive | intellectual developmental disorder with dysmorphic facies, seizures, and distal limb anomalies | 2 |
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|---|---|
| OTUD6B | Orphanet:505237 | Early-onset seizures-distal limb anomalies-facial dysmorphism-global developmental delay syndrome |
Cohort genes → proteins
2 cohort genes, 2 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|---|
| multi_evidence | 2 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|---|---|---|---|---|
| OTUD6B | HGNC:24281 | ENSG00000155100 | Q8N6M0 | Deubiquitinase OTUD6B | gencc,clinvar |
| OTUD4 | HGNC:24949 | ENSG00000164164 | Q01804 | OTU domain-containing protein 4 | clinvar |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|---|---|
| OTUD6B | Deubiquitinase OTUD6B | Deubiquitinating enzyme that may play a role in the ubiquitin-dependent regulation of protein synthesis, downstream of mTORC1. |
| OTUD4 | OTU domain-containing protein 4 | Deubiquitinase which hydrolyzes the isopeptide bond between the ubiquitin C-terminus and the lysine epsilon-amino group of the target protein. |
Protein-family classification
Druggable: 2 · Difficult: 0 · Unknown: 0 · Druggable fraction: 1.0
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|---|---|---|
| Protease | 2 | 36.6× | 7e-04 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|---|---|---|---|
| OTUD6B | Protease | yes | OTU_dom, Papain-like_cys_pep_sf, OTU_OTUD6 | |
| OTUD4 | Protease | yes | OTU_dom, Papain-like_cys_pep_sf, Peptidase_C85-like |
Expression context
Cohort genes with no expression data: 0.
2 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 0 |
| broad (>20) | 2 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|---|
| calcaneal tendon | 1 |
| epithelial cell of pancreas | 1 |
| sural nerve | 1 |
| Brodmann (1909) area 10 | 1 |
| middle frontal gyrus | 1 |
| paraflocculus | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|---|---|---|---|
| OTUD6B | 249 | ubiquitous | marker | sural nerve, epithelial cell of pancreas, calcaneal tendon |
| OTUD4 | 295 | ubiquitous | marker | middle frontal gyrus, Brodmann (1909) area 10, paraflocculus |
Protein interactions among cohort
Intra-cohort edges: 1.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|---|
| OTUD4 | 2,337 |
| OTUD6B | 1,379 |
Intra-cohort edges
| A | B | Sources |
|---|---|---|
| OTUD4 | OTUD6B | string_interaction |
Structural data
PDB: 0 · AlphaFold-only: 2 · No structure: 0
AlphaFold-only cohort genes (top 30 by pLDDT)
| Symbol | UniProt | pLDDT |
|---|---|---|
| OTUD6B | Q8N6M0 | 85.27 |
| OTUD4 | Q01804 | 49.68 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 0. Enrichment computed across 2 evidence-associated genes (0 with Reactome annotation).
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 2 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| regulation of protein K48-linked deubiquitination | 1 | 8426.0× | 0.002 | OTUD4 |
| negative regulation of interleukin-1-mediated signaling pathway | 1 | 842.6× | 0.003 | OTUD4 |
| DNA alkylation repair | 1 | 766.0× | 0.003 | OTUD4 |
| protein K11-linked deubiquitination | 1 | 766.0× | 0.003 | OTUD4 |
| proteasome assembly | 1 | 766.0× | 0.003 | OTUD6B |
| proteolysis | 2 | 34.2× | 0.003 | OTUD6B, OTUD4 |
| negative regulation of toll-like receptor signaling pathway | 1 | 421.3× | 0.005 | OTUD4 |
| protein K48-linked deubiquitination | 1 | 324.1× | 0.005 | OTUD4 |
| protein K63-linked deubiquitination | 1 | 312.1× | 0.005 | OTUD4 |
| positive regulation of translation | 1 | 113.9× | 0.011 | OTUD6B |
| antiviral innate immune response | 1 | 113.9× | 0.011 | OTUD4 |
| negative regulation of translation | 1 | 98.0× | 0.012 | OTUD6B |
| protein deubiquitination | 1 | 88.7× | 0.012 | OTUD6B |
| cell population proliferation | 1 | 51.4× | 0.019 | OTUD6B |
Therapeutics
Drug target analysis
Approved (phase 4): 0 · Phase ≥3: 0 · Phased (≥1): 0 · Undrugged: 2
Druggability breadth: 1 of 2 evidence-associated genes (50%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|---|---|
| OTUD6B | 0 | 0 |
| OTUD4 | 0 | 0 |
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 0.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|---|---|
| OTUD6B | 2 | Binding:2 |
Pharmacogenomics
Cohort genes with a PharmGKB record: 2; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Chemical tractability of cohort targets
0 approved/phased compounds have measured bioactivity against a cohort gene (and aren’t yet in disease-level trials). This is a research / tractability signal, NOT a therapeutic recommendation — a bioactivity row often reflects off-target or screening binding (e.g. promiscuous kinase inhibitors against a cohort kinase), implying no disease mechanism.
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|---|---|---|
| A | Approved (phase 4 drug) | 0 | |
| B | Phased (≥1) drug, not yet approved | 0 | |
| C | Druggable family + PDB, no drug | 0 | |
| D | Druggable family + AlphaFold only, no drug | 2 | OTUD6B, OTUD4 |
| E | Difficult family or no structure, no drug | 0 |
Undrugged target profiles
2 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
| Symbol | ChEMBL assays | Drugged partners (top 3) |
|---|---|---|
| OTUD6B | 2 | — |
| OTUD4 | 0 | — |
Clinical trials & evidence
Clinical trials
Clinical trials: 0.