Intellectual disability, autosomal dominant 40
diseaseOn this page
Also known as autosomal dominant intellectual disability 40autosomal dominant non-syndromic intellectual disability caused by mutation in CHAMP1CHAMP1 autosomal dominant non-syndromic intellectual disabilityintellectual disability, autosomal dominant type 40mental retardation, autosomal dominant 40mental retardation, autosomal dominant type 40MRD40
Summary
Intellectual disability, autosomal dominant 40 (MONDO:0014699) is a disease caused by variants in CAMK2B and CHAMP1, with 6 cohort genes.
At a glance
- Prevalence: <1 / 1 000 000 (Worldwide) [Orphanet-validated]
- Causal genes: CAMK2B (GenCC Definitive), CHAMP1 (GenCC Definitive)
- Cohort genes: 6
- ClinVar variants: 64
Clinical features
Epidemiology
Prevalence records
2 prevalence record(s), Orphanet:
| Type | Class | Value | Geography | Validation |
|---|---|---|---|---|
| Cases/families | 37 | Worldwide | Validated | |
| Point prevalence | <1 / 1 000 000 | Worldwide | Validated |
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | intellectual disability, autosomal dominant 40 |
| Mondo ID | MONDO:0014699 |
| OMIM | 616579 |
| Orphanet | 692193 |
| DOID | DOID:0070070 |
| UMLS | C5676894 |
| MedGen | 1810363 |
| GARD | 0013539 |
| Is cancer (heuristic) | no |
Also known as: autosomal dominant intellectual disability 40 · autosomal dominant non-syndromic intellectual disability caused by mutation in CHAMP1 · CHAMP1 autosomal dominant non-syndromic intellectual disability · intellectual disability, autosomal dominant 40 · intellectual disability, autosomal dominant type 40 · mental retardation, autosomal dominant 40 · mental retardation, autosomal dominant type 40 · MRD40
Data availability: 64 ClinVar variants · 4 GenCC gene-disease records.
Disease family
Classification path: disease › human disease › disease by etiologic mechanism › disease of genetic or genomic mechanism › hereditary disease › autosomal genetic disease › autosomal dominant disease › intellectual disability, autosomal dominant › intellectual disability, autosomal dominant 40
Related subtypes (28): intellectual disability, autosomal dominant 1, intellectual disability, autosomal dominant 3, intellectual disability, autosomal dominant 4, intellectual disability, autosomal dominant 5, intellectual disability, autosomal dominant 6, intellectual disability, autosomal dominant 2, neurodevelopmental disorder with or without hyperkinetic movements and seizures, autosomal dominant, intellectual disability, autosomal dominant 9, intellectual disability, autosomal dominant 10, intellectual disability, autosomal dominant 11, intellectual disability, autosomal dominant 24, intellectual disability, autosomal dominant 38, intellectual disability, autosomal dominant 39, intellectual disability, autosomal dominant 42, autosomal dominant non-syndromic intellectual disability, intellectual developmental disorder, autosomal dominant 65, intellectual developmental disorder, autosomal dominant 69, intellectual developmental disorder, autosomal dominant 66, intellectual developmental disorder, autosomal dominant 64, intellectual developmental disorder, autosomal dominant 67, intellectual developmental disorder, autosomal dominant 68, autosomal dominant syndromic intellectual disability, intellectual developmental disorder, autosomal dominant 70, intellectual developmental disorder, autosomal dominant 71, with behavioral abnormalities, intellectual developmental disorder, autosomal dominant 72, intellectual developmental disorder, autosomal dominant 74, intellectual developmental disorder, autosomal dominant 75, intellectual developmental disorder, autosomal dominant 76
Genetics & variants
GWAS landscape
No GWAS associations recorded — common-variant (GWAS) studies don’t cover this disease (typical for Mendelian / rare diseases). See the curated gene cohort and Mendelian overlap below.
Variant details and genetic-evidence tiers
ClinVar germline variants
64 retrieved; paginated sample, class counts are floors:
26 uncertain significance, 20 pathogenic, 11 likely pathogenic, 4 conflicting classifications of pathogenicity, 1 not provided, 1 benign, 1 benign/likely benign
| ClinVar | Variant (HGVS) | Gene | Classification | Review |
|---|---|---|---|---|
| 3765511 | NC_000013.11:g.114236634_114326291del | CDC16 | Pathogenic | no assertion criteria provided |
| 1064505 | NM_032436.4(CHAMP1):c.959dup (p.Pro320_Arg321insTer) | CHAMP1 | Pathogenic | criteria provided, single submitter |
| 1065455 | NM_032436.4(CHAMP1):c.647_649dup (p.Ser217Ter) | CHAMP1 | Pathogenic | criteria provided, single submitter |
| 1164024 | NM_032436.4(CHAMP1):c.1995dup (p.Ser666Ter) | CHAMP1 | Pathogenic | no assertion criteria provided |
| 1322073 | NM_032436.4(CHAMP1):c.1692dup (p.Lys565fs) | CHAMP1 | Pathogenic | criteria provided, single submitter |
| 1338820 | NM_032436.4(CHAMP1):c.1741del (p.Glu581fs) | CHAMP1 | Pathogenic | criteria provided, single submitter |
| 1686872 | NM_032436.4(CHAMP1):c.1043G>A (p.Trp348Ter) | CHAMP1 | Pathogenic | no assertion criteria provided |
| 1686873 | NM_032436.4(CHAMP1):c.1876_1877del (p.Ser626fs) | CHAMP1 | Pathogenic | no assertion criteria provided |
| 208414 | NM_032436.4(CHAMP1):c.635del (p.Pro212fs) | CHAMP1 | Pathogenic | criteria provided, single submitter |
| 208415 | NM_032436.4(CHAMP1):c.1192C>T (p.Arg398Ter) | CHAMP1 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 208416 | NM_032436.4(CHAMP1):c.1768C>T (p.Gln590Ter) | CHAMP1 | Pathogenic | criteria provided, single submitter |
| 208417 | NM_032436.4(CHAMP1):c.1866_1867del (p.Asp622fs) | CHAMP1 | Pathogenic | criteria provided, single submitter |
| 210049 | NM_032436.4(CHAMP1):c.1002G>A (p.Trp334Ter) | CHAMP1 | Pathogenic | no assertion criteria provided |
| 210050 | NM_032436.4(CHAMP1):c.1489C>T (p.Arg497Ter) | CHAMP1 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 217909 | NM_032436.4(CHAMP1):c.542_543del (p.Ser181fs) | CHAMP1 | Pathogenic | criteria provided, single submitter |
| 2442350 | NM_032436.4(CHAMP1):c.2068_2069del (p.Glu690fs) | CHAMP1 | Pathogenic | criteria provided, single submitter |
| 3233724 | NM_032436.4(CHAMP1):c.2000_2001del (p.Lys667fs) | CHAMP1 | Pathogenic | criteria provided, single submitter |
| 4819158 | NM_032436.4(CHAMP1):c.292C>T (p.Gln98Ter) | CHAMP1 | Pathogenic | criteria provided, single submitter |
| 981896 | NM_032436.4(CHAMP1):c.1858A>T (p.Lys620Ter) | CHAMP1 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 997692 | NM_032436.4(CHAMP1):c.530_532delinsTTT (p.Ser177_Lys178delinsPheTer) | CHAMP1 | Pathogenic | no assertion criteria provided |
| 1687482 | NM_032436.4(CHAMP1):c.824_828del (p.Thr274_Ser275insTer) | CHAMP1 | Likely pathogenic | criteria provided, single submitter |
| 1709765 | NM_032436.4(CHAMP1):c.575_576del (p.Pro192fs) | CHAMP1 | Likely pathogenic | criteria provided, single submitter |
| 2444101 | NM_032436.4(CHAMP1):c.2004_2005del (p.Asn669fs) | CHAMP1 | Likely pathogenic | criteria provided, single submitter |
| 2572392 | NM_032436.4(CHAMP1):c.1440G>A (p.Trp480Ter) | CHAMP1 | Likely pathogenic | criteria provided, single submitter |
| 2663767 | NM_032436.4(CHAMP1):c.1903_1906del (p.Glu635fs) | CHAMP1 | Likely pathogenic | criteria provided, single submitter |
| 3024272 | NM_032436.4(CHAMP1):c.343C>T (p.Gln115Ter) | CHAMP1 | Likely pathogenic | criteria provided, single submitter |
| 3062279 | NM_032436.4(CHAMP1):c.2027dup (p.Glu677fs) | CHAMP1 | Likely pathogenic | criteria provided, single submitter |
| 4294452 | NM_032436.4(CHAMP1):c.1140G>A (p.Trp380Ter) | CHAMP1 | Likely pathogenic | criteria provided, single submitter |
| 4813317 | NM_032436.4(CHAMP1):c.2081_2082del (p.Ile693_Ser694insTer) | CHAMP1 | Likely pathogenic | criteria provided, single submitter |
| 4813320 | NM_032436.4(CHAMP1):c.2062dup (p.Glu688fs) | CHAMP1 | Likely pathogenic | criteria provided, single submitter |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 8 · Orphanet: 5 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
GenCC gene–disease validity (cohort genes)
the Disease column is the GenCC-asserted condition — a cohort gene’s strongest validity may be for a related predisposition syndrome.
| Gene | Classification | Inheritance | Disease | Records |
|---|---|---|---|---|
| CAMK2B | Definitive | Autosomal dominant | intellectual disability, autosomal dominant 40 | 4 |
| CHAMP1 | Definitive | Autosomal dominant | intellectual disability, autosomal dominant 40 | 4 |
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|---|---|
| CAMK2B | Orphanet:178469 | Autosomal dominant non-syndromic intellectual disability |
| CHAMP1 | Orphanet:692193 | CHAMP1-related intellectual disability-facial dysmorphism-behavioral abnormalities syndrome |
| SRC | Orphanet:480851 | Hereditary thrombocytopenia with early-onset myelofibrosis |
| TRIO | Orphanet:476126 | Micrognathia-recurrent infections-behavioral abnormalities-mild intellectual disability syndrome |
| KMT2E | Orphanet:528084 | Non-specific syndromic intellectual disability |
Cohort genes → proteins
6 cohort genes, 6 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|---|
| multi_evidence | 6 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|---|---|---|---|---|
| CAMK2B | HGNC:1461 | ENSG00000058404 | Q13554 | Calcium/calmodulin-dependent protein kinase type II subunit beta | gencc,clinvar |
| CHAMP1 | HGNC:20311 | ENSG00000198824 | Q96JM3 | Chromosome alignment-maintaining phosphoprotein 1 | gencc,clinvar |
| SRC | HGNC:11283 | ENSG00000197122 | P12931 | Proto-oncogene tyrosine-protein kinase Src | clinvar |
| TRIO | HGNC:12303 | ENSG00000038382 | O75962 | Triple functional domain protein | clinvar |
| CDC16 | HGNC:1720 | ENSG00000130177 | Q13042 | Cell division cycle protein 16 homolog | clinvar |
| KMT2E | HGNC:18541 | ENSG00000005483 | Q8IZD2 | Inactive histone-lysine N-methyltransferase 2E | clinvar |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|---|---|
| CAMK2B | Calcium/calmodulin-dependent protein kinase type II subunit beta | Calcium/calmodulin-dependent protein kinase that functions autonomously after Ca(2+)/calmodulin-binding and autophosphorylation, and is involved in dendritic spine and synapse formation, neuronal plasticity and regulation of sarcoplasmic r… |
| CHAMP1 | Chromosome alignment-maintaining phosphoprotein 1 | Required for proper alignment of chromosomes at metaphase and their accurate segregation during mitosis. |
| SRC | Proto-oncogene tyrosine-protein kinase Src | Non-receptor protein tyrosine kinase which is activated following engagement of many different classes of cellular receptors including immune response receptors, integrins and other adhesion receptors, receptor protein tyrosine kinases, G… |
| TRIO | Triple functional domain protein | Guanine nucleotide exchange factor (GEF) for RHOA and RAC1 GTPases. |
| CDC16 | Cell division cycle protein 16 homolog | Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. |
| KMT2E | Inactive histone-lysine N-methyltransferase 2E | Associates with chromatin regions downstream of transcriptional start sites of active genes and thus regulates gene transcription. |
Protein-family classification
Druggable: 3 · Difficult: 2 · Unknown: 1 · Druggable fraction: 0.5
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|---|---|---|
| Kinase | 3 | 13.9× | 0.003 |
| Transcription factor | 2 | 2.8× | 0.237 |
| Other/Unknown | 1 | 0.3× | 0.993 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|---|---|---|---|
| CAMK2B | Kinase | yes | 2.7.11.17 | Prot_kinase_dom, Ser/Thr_kinase_AS, Kinase-like_dom_sf |
| CHAMP1 | Transcription factor | no | Znf_C2H2_type, Znf_C2H2_sf, CAMP | |
| SRC | Kinase | yes | 2.7.10.2 | Prot_kinase_dom, SH2, Ser-Thr/Tyr_kinase_cat_dom |
| TRIO | Kinase | yes | DH_dom, Prot_kinase_dom, CRAL-TRIO_dom | |
| CDC16 | Other/Unknown | no | TPR-like_helical_dom_sf, TPR_rpt | |
| KMT2E | Transcription factor | no | SET_dom, Znf_PHD, Znf_FYVE_PHD |
Expression context
Cohort genes with no expression data: 0.
5 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 0 |
| broad (>20) | 6 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|---|
| cortical plate | 2 |
| cerebellar cortex | 1 |
| cerebellar hemisphere | 1 |
| right hemisphere of cerebellum | 1 |
| ileal mucosa | 1 |
| secondary oocyte | 1 |
| body of stomach | 1 |
| gall bladder | 1 |
| rectum | 1 |
| stromal cell of endometrium | 1 |
| sural nerve | 1 |
| bronchial epithelial cell | 1 |
| epithelium of bronchus | 1 |
| right uterine tube | 1 |
| mucosa of paranasal sinus | 1 |
| tendon | 1 |
| tendon of biceps brachii | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|---|---|---|---|
| CAMK2B | 233 | broad | marker | cerebellar cortex, cerebellar hemisphere, right hemisphere of cerebellum |
| CHAMP1 | 244 | ubiquitous | yes | ileal mucosa, cortical plate, secondary oocyte |
| SRC | 236 | ubiquitous | marker | body of stomach, gall bladder, rectum |
| TRIO | 279 | ubiquitous | marker | sural nerve, cortical plate, stromal cell of endometrium |
| CDC16 | 298 | ubiquitous | marker | right uterine tube, bronchial epithelial cell, epithelium of bronchus |
| KMT2E | 264 | ubiquitous | marker | tendon of biceps brachii, tendon, mucosa of paranasal sinus |
Protein interactions among cohort
Intra-cohort edges: 0.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|---|
| SRC | 11,608 |
| CDC16 | 3,185 |
| TRIO | 2,892 |
| CAMK2B | 2,679 |
| KMT2E | 2,340 |
| CHAMP1 | 967 |
Structural data
PDB: 6 · AlphaFold-only: 0 · No structure: 0
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|---|---|
| SRC | P12931 | 79 |
| CDC16 | Q13042 | 21 |
| CAMK2B | Q13554 | 4 |
| CHAMP1 | Q96JM3 | 4 |
| TRIO | O75962 | 4 |
| KMT2E | Q8IZD2 | 3 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 203. Enrichment computed across 6 evidence-associated genes (4 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 4 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| DCC mediated attractive signaling | 2 | 356.9× | 0.002 | SRC, TRIO |
| Long-term potentiation | 2 | 237.9× | 0.002 | CAMK2B, SRC |
| Signaling by RAS mutants | 2 | 211.5× | 0.002 | CAMK2B, SRC |
| RAF activation | 2 | 167.9× | 0.002 | CAMK2B, SRC |
| Signaling by RAF1 mutants | 2 | 139.3× | 0.002 | CAMK2B, SRC |
| Signaling by moderate kinase activity BRAF mutants | 2 | 126.9× | 0.002 | CAMK2B, SRC |
| Paradoxical activation of RAF signaling by kinase inactive BRAF | 2 | 126.9× | 0.002 | CAMK2B, SRC |
| Signaling downstream of RAS mutants | 2 | 126.9× | 0.002 | CAMK2B, SRC |
| Oncogenic MAPK signaling | 2 | 124.1× | 0.002 | CAMK2B, SRC |
| Post NMDA receptor activation events | 2 | 102.0× | 0.003 | CAMK2B, SRC |
| Activation of NMDA receptors and postsynaptic events | 2 | 92.1× | 0.003 | CAMK2B, SRC |
| Signaling by BRAF and RAF1 fusions | 2 | 85.2× | 0.003 | CAMK2B, SRC |
| MAPK1/MAPK3 signaling | 2 | 65.6× | 0.005 | CAMK2B, SRC |
| RNA Polymerase II Transcription | 3 | 16.9× | 0.005 | CAMK2B, SRC, CDC16 |
| MAPK family signaling cascades | 2 | 51.4× | 0.007 | CAMK2B, SRC |
| Neurotransmitter receptors and postsynaptic signal transmission | 2 | 50.1× | 0.007 | CAMK2B, SRC |
| Intracellular signaling by second messengers | 2 | 45.7× | 0.008 | CAMK2B, SRC |
| Gene expression (Transcription) | 3 | 13.4× | 0.008 | CAMK2B, SRC, CDC16 |
| Regulation of gap junction activity | 1 | 951.7× | 0.011 | SRC |
| Transmission across Chemical Synapses | 2 | 38.1× | 0.011 | CAMK2B, SRC |
| Generic Transcription Pathway | 3 | 11.3× | 0.011 | CAMK2B, SRC, CDC16 |
| RAF/MAP kinase cascade | 2 | 30.5× | 0.014 | CAMK2B, SRC |
| Disease | 3 | 9.8× | 0.015 | CAMK2B, SRC, CDC16 |
| Immune System | 3 | 9.7× | 0.015 | CAMK2B, SRC, CDC16 |
| Diseases of signal transduction by growth factor receptors and second messengers | 2 | 28.4× | 0.015 | CAMK2B, SRC |
| Activated NTRK2 signals through FYN | 1 | 475.8× | 0.016 | SRC |
| Activated NTRK3 signals through PI3K | 1 | 475.8× | 0.016 | SRC |
| Signaling by NTRK2 (TRKB) | 1 | 407.9× | 0.018 | SRC |
| CREB1 phosphorylation through the activation of CaMKII/CaMKK/CaMKIV cascasde | 1 | 356.9× | 0.019 | CAMK2B |
| Netrin mediated repulsion signals | 1 | 317.2× | 0.019 | SRC |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 6 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| regulation of caveolin-mediated endocytosis | 1 | 2808.7× | 0.016 | SRC |
| regulation of skeletal muscle adaptation | 1 | 1404.3× | 0.016 | CAMK2B |
| regulation of toll-like receptor 3 signaling pathway | 1 | 1404.3× | 0.016 | SRC |
| positive regulation of dephosphorylation | 1 | 1404.3× | 0.016 | SRC |
| sister chromatid biorientation | 1 | 936.2× | 0.016 | CHAMP1 |
| positive regulation of platelet-derived growth factor receptor-beta signaling pathway | 1 | 936.2× | 0.016 | SRC |
| regulation of synapse structural plasticity | 1 | 702.2× | 0.016 | CAMK2B |
| regulation of cell projection assembly | 1 | 702.2× | 0.016 | SRC |
| regulation of epithelial cell migration | 1 | 468.1× | 0.016 | SRC |
| negative regulation of telomere maintenance | 1 | 468.1× | 0.016 | SRC |
| cellular response to progesterone stimulus | 1 | 468.1× | 0.016 | SRC |
| negative regulation of neutrophil activation | 1 | 401.2× | 0.016 | SRC |
| signal complex assembly | 1 | 351.1× | 0.016 | SRC |
| cell surface receptor protein tyrosine phosphatase signaling pathway | 1 | 351.1× | 0.016 | TRIO |
| osteoclast development | 1 | 351.1× | 0.016 | SRC |
| positive regulation of small GTPase mediated signal transduction | 1 | 351.1× | 0.016 | SRC |
| positive regulation of lamellipodium morphogenesis | 1 | 351.1× | 0.016 | SRC |
| regulation of early endosome to late endosome transport | 1 | 351.1× | 0.016 | SRC |
| regulation of intracellular estrogen receptor signaling pathway | 1 | 312.1× | 0.016 | SRC |
| positive regulation of integrin activation | 1 | 312.1× | 0.016 | SRC |
| ERBB2 signaling pathway | 1 | 312.1× | 0.016 | SRC |
| negative regulation of mitochondrial depolarization | 1 | 312.1× | 0.016 | SRC |
| positive regulation of podosome assembly | 1 | 312.1× | 0.016 | SRC |
| positive regulation of synapse maturation | 1 | 312.1× | 0.016 | CAMK2B |
| regulation of dendritic spine development | 1 | 280.9× | 0.016 | CAMK2B |
| angiotensin-activated signaling pathway | 1 | 255.3× | 0.016 | SRC |
| regulation of bone resorption | 1 | 255.3× | 0.016 | SRC |
| intestinal epithelial cell development | 1 | 255.3× | 0.016 | SRC |
| neutrophil mediated immunity | 1 | 234.1× | 0.016 | KMT2E |
| protein localization to kinetochore | 1 | 234.1× | 0.016 | CHAMP1 |
Therapeutics
Drug target analysis
Approved (phase 4): 2 · Phase ≥3: 2 · Phased (≥1): 3 · Undrugged: 3
Druggability breadth: 6 of 6 evidence-associated genes (100%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Genes with an approved drug
The molecule shown is one approved compound that hits the gene — not necessarily a drug of choice or one indicated for this disease.
| Symbol | Example approved molecule |
|---|---|
| CAMK2B | FEDRATINIB |
| SRC | PONATINIB |
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|---|---|
| SRC | 103 | 4 |
| CAMK2B | 25 | 4 |
| CHAMP1 | 1 | 2 |
| TRIO | 0 | 0 |
| CDC16 | 0 | 0 |
| KMT2E | 0 | 0 |
Drugs targeting cohort genes (top 30)
| Molecule | Max phase | Targets in cohort |
|---|---|---|
| FEDRATINIB | 4 | CAMK2B, SRC |
| SORAFENIB | 4 | CAMK2B, SRC |
| RUXOLITINIB | 4 | CAMK2B |
| PALBOCICLIB | 4 | CAMK2B |
| ABEMACICLIB | 4 | CAMK2B |
| SUNITINIB | 4 | CAMK2B, SRC |
| MIDOSTAURIN | 4 | CAMK2B, SRC |
| PONATINIB | 4 | SRC |
| AFATINIB | 4 | SRC |
| TIVOZANIB | 4 | SRC |
| DASATINIB ANHYDROUS | 4 | SRC |
| NICLOSAMIDE | 4 | SRC |
| NERATINIB | 4 | SRC |
| INFIGRATINIB PHOSPHATE | 4 | SRC |
| INFIGRATINIB | 4 | SRC |
| IBRUTINIB | 4 | SRC |
| ENTRECTINIB | 4 | SRC |
| CABOZANTINIB | 4 | SRC |
| DACOMITINIB ANHYDROUS | 4 | SRC |
| CERITINIB | 4 | SRC |
| VANDETANIB | 4 | SRC |
| NILOTINIB | 4 | SRC |
| BOSUTINIB | 4 | SRC |
| BRIGATINIB | 4 | SRC |
| REPOTRECTINIB | 4 | SRC |
| PAZOPANIB | 4 | SRC |
| NINTEDANIB | 4 | SRC |
| DASATINIB | 4 | SRC |
| ERLOTINIB | 4 | SRC |
| LAPATINIB | 4 | SRC |
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 2.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|---|---|
| SRC | 1,917 | Binding:1858, Functional:43, ADMET:16 |
| CAMK2B | 314 | Binding:313, Functional:1 |
| CHAMP1 | 6 | Binding:6 |
| TRIO | 2 | Binding:2 |
| CDC16 | 1 | Binding:1 |
| KMT2E | 1 | Binding:1 |
Cohort enzymes (BRENDA EC)
| Symbol | EC numbers | Names |
|---|---|---|
| CAMK2B | 2.7.11.17 | Ca2+/calmodulin-dependent protein kinase |
| SRC | 2.7.10.2 | non-specific protein-tyrosine kinase |
Cohort genes with high screening signal
≥100 ChEMBL assays — a studied-ness signal; see Therapeutics for approved-drug status.
| Symbol | ChEMBL assays |
|---|---|
| CAMK2B | 314 |
| SRC | 1,917 |
Pharmacogenomics
Cohort genes with a PharmGKB record: 6; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Chemical tractability of cohort targets
30 approved/phased compounds have measured bioactivity against a cohort gene (and aren’t yet in disease-level trials). This is a research / tractability signal, NOT a therapeutic recommendation — a bioactivity row often reflects off-target or screening binding (e.g. promiscuous kinase inhibitors against a cohort kinase), implying no disease mechanism.
| Compound | Max phase | Cohort target (bioactivity) |
|---|---|---|
| FEDRATINIB | 4 | CAMK2B, SRC |
| SORAFENIB | 4 | CAMK2B, SRC |
| RUXOLITINIB | 4 | CAMK2B |
| PALBOCICLIB | 4 | CAMK2B |
| ABEMACICLIB | 4 | CAMK2B |
| SUNITINIB | 4 | CAMK2B, SRC |
| MIDOSTAURIN | 4 | CAMK2B, SRC |
| PONATINIB | 4 | SRC |
| AFATINIB | 4 | SRC |
| TIVOZANIB | 4 | SRC |
| DASATINIB ANHYDROUS | 4 | SRC |
| NICLOSAMIDE | 4 | SRC |
| NERATINIB | 4 | SRC |
| INFIGRATINIB PHOSPHATE | 4 | SRC |
| INFIGRATINIB | 4 | SRC |
| IBRUTINIB | 4 | SRC |
| ENTRECTINIB | 4 | SRC |
| CABOZANTINIB | 4 | SRC |
| DACOMITINIB ANHYDROUS | 4 | SRC |
| CERITINIB | 4 | SRC |
| VANDETANIB | 4 | SRC |
| NILOTINIB | 4 | SRC |
| BOSUTINIB | 4 | SRC |
| BRIGATINIB | 4 | SRC |
| REPOTRECTINIB | 4 | SRC |
| PAZOPANIB | 4 | SRC |
| NINTEDANIB | 4 | SRC |
| DASATINIB | 4 | SRC |
| ERLOTINIB | 4 | SRC |
| LAPATINIB | 4 | SRC |
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|---|---|---|
| A | Approved (phase 4 drug) | 2 | CAMK2B, SRC |
| B | Phased (≥1) drug, not yet approved | 1 | CHAMP1 |
| C | Druggable family + PDB, no drug | 1 | TRIO |
| D | Druggable family + AlphaFold only, no drug | 0 | |
| E | Difficult family or no structure, no drug | 2 | CDC16, KMT2E |
Undrugged target profiles
3 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
| Symbol | ChEMBL assays | Drugged partners (top 3) |
|---|---|---|
| TRIO | 2 | — |
| CDC16 | 1 | — |
| KMT2E | 1 | — |
Clinical trials & evidence
Clinical trials
Clinical trials: 0.