Linear nevus sebaceous syndrome
disease diseaseOn this page
Also known as epidermal nevus syndromeJadassohn nevus phakomatosisJNPlinear sebaceous NevusNevus sebaceous of JadassohnNevus sebaceus of JadassohnNevus Sebaceus Syndromeorganoid Nevusorganoid nevus phakomatosisorganoid nevus syndromeSchimmelpenning Feuerstein Mims syndromeSchimmelpenning syndromeSCHIMMELPENNING-FEUERSTEIN-MIMS syndromeSchimmelpenning-Feuerstein-Mims syndrome, somatic mosaicsebaceous nevus syndrome linearSFMSFM syndromeSolomon syndrome
Summary
Linear nevus sebaceous syndrome (MONDO:0008097) is a disease caused by KRAS (GenCC Strong), with 4 cohort genes and 3 clinical trials. The dominant Reactome pathway is Signaling by RAS GAP mutants (3 cohort genes). Top therapeutic interventions include burosumab.
At a glance
- Prevalence: Unknown (Worldwide) [Orphanet-validated]
- Causal gene: KRAS (GenCC Strong)
- Cohort genes: 4
- ClinVar variants: 54
- Phenotypes (HPO): 31
- Clinical trials: 3
Clinical features
Signs & symptoms
Clinical features (HPO)
31 HPO clinical features (Orphanet curated; top 31 by frequency):
| HPO ID | Term | Frequency |
|---|---|---|
| HP:0000269 | Prominent occiput | Very frequent (80-99%) |
| HP:0000506 | Telecanthus | Very frequent (80-99%) |
| HP:0000568 | Microphthalmia | Very frequent (80-99%) |
| HP:0000612 | Iris coloboma | Very frequent (80-99%) |
| HP:0000995 | Melanocytic nevus | Very frequent (80-99%) |
| HP:0001048 | Cavernous hemangioma | Very frequent (80-99%) |
| HP:0001249 | Intellectual disability | Very frequent (80-99%) |
| HP:0001250 | Seizure | Very frequent (80-99%) |
| HP:0001252 | Hypotonia | Very frequent (80-99%) |
| HP:0001315 | Reduced tendon reflexes | Very frequent (80-99%) |
| HP:0001347 | Hyperreflexia | Very frequent (80-99%) |
| HP:0001596 | Alopecia | Very frequent (80-99%) |
| HP:0002007 | Frontal bossing | Very frequent (80-99%) |
| HP:0002119 | Ventriculomegaly | Very frequent (80-99%) |
| HP:0002353 | EEG abnormality | Very frequent (80-99%) |
| HP:0002816 | Genu recurvatum | Very frequent (80-99%) |
| HP:0003422 | Vertebral segmentation defect | Very frequent (80-99%) |
| HP:0004422 | Biparietal narrowing | Very frequent (80-99%) |
| HP:0007360 | Aplasia/Hypoplasia of the cerebellum | Very frequent (80-99%) |
| HP:0009720 | Adenoma sebaceum | Very frequent (80-99%) |
| HP:0100555 | Asymmetric growth | Very frequent (80-99%) |
| HP:0000324 | Facial asymmetry | Frequent (30-79%) |
| HP:0000478 | Abnormality of the eye | Frequent (30-79%) |
| HP:0000504 | Abnormality of vision | Frequent (30-79%) |
| HP:0001357 | Plagiocephaly | Frequent (30-79%) |
| HP:0002132 | Porencephaly | Frequent (30-79%) |
| HP:0007400 | Irregular hyperpigmentation | Frequent (30-79%) |
| HP:0001305 | Dandy-Walker malformation | Occasional (5-29%) |
| HP:0001510 | Growth delay | Occasional (5-29%) |
| HP:0002514 | Cerebral calcification | Occasional (5-29%) |
| HP:0007370 | Aplasia/Hypoplasia of the corpus callosum | Occasional (5-29%) |
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | linear nevus sebaceous syndrome |
| Mondo ID | MONDO:0008097 |
| OMIM | 163200 |
| Orphanet | 2612 |
| DOID | DOID:0111530 |
| NCIT | C4678 |
| UMLS | C4552097 |
| MedGen | 1646345 |
| GARD | 0010291 |
| NORD | 1692 |
| Is cancer (heuristic) | no |
Also known as: epidermal nevus syndrome · Jadassohn nevus phakomatosis · JNP · linear sebaceous Nevus · Nevus sebaceous of Jadassohn · Nevus sebaceus of Jadassohn · Nevus Sebaceus Syndrome · Nevus sebaceus syndrome · organoid Nevus · organoid nevus phakomatosis · organoid nevus syndrome · Schimmelpenning Feuerstein Mims syndrome · Schimmelpenning syndrome · SCHIMMELPENNING-FEUERSTEIN-MIMS syndrome · Schimmelpenning-Feuerstein-Mims syndrome, somatic mosaic · sebaceous nevus syndrome linear · SFM · SFM syndrome · Solomon syndrome
Data availability: 54 ClinVar variants · 1 GenCC gene-disease record · 1 cell line.
Disease family
Classification path: disease › human disease › disease by etiologic mechanism › cancer or benign tumor › neoplastic disease or syndrome › neoplasm › hamartoma › linear nevus sebaceous syndrome
Related subtypes (12): chondroid hamartoma, gastrointestinal hamartoma, linear and whorled nevoid hypermelanosis, congenital epulis, congenital smooth muscle hamartoma, hamartoma of skin appendage, hamartoma of lung, basaloid follicular hamartoma, angiomyomatous hamartoma, giant mammary hamartoma, mesenchymal hamartoma, odontoma
Genetics & variants
GWAS landscape
No GWAS associations recorded — common-variant (GWAS) studies don’t cover this disease (typical for Mendelian / rare diseases). See the curated gene cohort and Mendelian overlap below.
Variant details and genetic-evidence tiers
ClinVar germline variants
54 retrieved; paginated sample, class counts are floors:
21 uncertain significance, 9 pathogenic, 6 conflicting classifications of pathogenicity, 5 pathogenic/likely pathogenic, 4 likely benign, 3 likely pathogenic, 3 benign/likely benign, 3 benign
| ClinVar | Variant (HGVS) | Gene | Classification | Review |
|---|---|---|---|---|
| 12603 | NM_005343.4(HRAS):c.35G>C (p.Gly12Ala) | HRAS | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 12604 | NM_005343.4(HRAS):c.38G>A (p.Gly13Asp) | HRAS | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 12606 | NM_005343.4(HRAS):c.37G>T (p.Gly13Cys) | HRAS | Pathogenic | reviewed by expert panel |
| 12613 | NM_005343.4(HRAS):c.34G>T (p.Gly12Cys) | HRAS | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 35554 | NM_005343.4(HRAS):c.37G>C (p.Gly13Arg) | HRAS | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 391700 | NM_005343.4(HRAS):c.179G>T (p.Gly60Val) | HRAS | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 12582 | NM_004985.5(KRAS):c.35G>A (p.Gly12Asp) | KRAS | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 12583 | NM_004985.5(KRAS):c.35G>T (p.Gly12Val) | KRAS | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 12587 | NM_004985.5(KRAS):c.458A>T (p.Asp153Val) | KRAS | Pathogenic | reviewed by expert panel |
| 376325 | NM_033360.4(KRAS):c.64C>A (p.Gln22Lys) | KRAS | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 40452 | NM_004985.5(KRAS):c.65A>G (p.Gln22Arg) | KRAS | Pathogenic | reviewed by expert panel |
| 45122 | NM_004985.5(KRAS):c.35G>C (p.Gly12Ala) | KRAS | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 180848 | NM_005343.4(HRAS):c.38G>T (p.Gly13Val) | LRRC56 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 13900 | NM_002524.5(NRAS):c.182A>G (p.Gln61Arg) | NRAS | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 160364 | NM_005343.4(HRAS):c.182A>G (p.Gln61Arg) | HRAS | Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 4279977 | NM_004985.5(KRAS):c.350A>G (p.Lys117Arg) | KRAS | Likely pathogenic | criteria provided, single submitter |
| 13899 | NM_002524.5(NRAS):c.37G>C (p.Gly13Arg) | NRAS | Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 240138 | NM_005343.4(HRAS):c.546G>A (p.Met182Ile) | HRAS | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 180857 | NM_004985.5(KRAS):c.184GAG[1] (p.Glu63del) | KRAS | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 2454057 | NM_004985.5(KRAS):c.168C>T (p.Leu56=) | KRAS | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 503538 | NM_004985.5(KRAS):c.407G>A (p.Ser136Asn) | KRAS | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 620625 | NM_033360.4(KRAS):c.*101_*106del | KRAS | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 626130 | NM_033360.4(KRAS):c.112-5C>T | KRAS | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 177918 | NM_005343.4(HRAS):c.505C>T (p.Arg169Trp) | HRAS | Uncertain significance | criteria provided, multiple submitters, no conflicts |
| 180851 | NM_005343.4(HRAS):c.367C>T (p.Arg123Cys) | HRAS | Uncertain significance | criteria provided, multiple submitters, no conflicts |
| 180856 | NM_005343.4(HRAS):c.506G>A (p.Arg169Gln) | HRAS | Uncertain significance | criteria provided, multiple submitters, no conflicts |
| 3599788 | NM_005343.4(HRAS):c.550T>G (p.Cys184Gly) | HRAS | Uncertain significance | criteria provided, multiple submitters, no conflicts |
| 40447 | NM_005343.4(HRAS):c.508A>T (p.Lys170Ter) | HRAS | Uncertain significance | reviewed by expert panel |
| 409949 | NM_005343.4(HRAS):c.391C>T (p.Gln131Ter) | HRAS | Uncertain significance | criteria provided, multiple submitters, no conflicts |
| 409951 | NM_005343.4(HRAS):c.398T>A (p.Leu133His) | HRAS | Uncertain significance | criteria provided, multiple submitters, no conflicts |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 17 · Orphanet: 24 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
GenCC gene–disease validity (cohort genes)
the Disease column is the GenCC-asserted condition — a cohort gene’s strongest validity may be for a related predisposition syndrome.
| Gene | Classification | Inheritance | Disease | Records |
|---|---|---|---|---|
| KRAS | Strong | Autosomal dominant | linear nevus sebaceous syndrome | 17 |
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|---|---|
| KRAS | Orphanet:1333 | Familial pancreatic carcinoma |
| KRAS | Orphanet:1340 | Cardiofaciocutaneous syndrome |
| KRAS | Orphanet:144 | Lynch syndrome |
| KRAS | Orphanet:146 | Differentiated thyroid carcinoma |
| KRAS | Orphanet:2396 | Encephalocraniocutaneous lipomatosis |
| KRAS | Orphanet:251615 | Pilomyxoid astrocytoma |
| KRAS | Orphanet:2612 | Linear nevus sebaceus syndrome |
| KRAS | Orphanet:268114 | RAS-associated autoimmune leukoproliferative disease |
| KRAS | Orphanet:3339 | Oculoectodermal syndrome |
| KRAS | Orphanet:648 | Noonan syndrome |
| KRAS | Orphanet:86834 | Juvenile myelomonocytic leukemia |
| LRRC56 | Orphanet:244 | Primary ciliary dyskinesia |
| HRAS | Orphanet:146 | Differentiated thyroid carcinoma |
| HRAS | Orphanet:2612 | Linear nevus sebaceus syndrome |
| HRAS | Orphanet:2874 | Phakomatosis pigmentokeratotica |
| HRAS | Orphanet:3071 | Costello syndrome |
| HRAS | Orphanet:79414 | Woolly hair nevus |
| NRAS | Orphanet:146 | Differentiated thyroid carcinoma |
| NRAS | Orphanet:2612 | Linear nevus sebaceus syndrome |
| NRAS | Orphanet:268114 | RAS-associated autoimmune leukoproliferative disease |
| NRAS | Orphanet:389 | Langerhans cell histiocytosis |
| NRAS | Orphanet:626 | Large/giant congenital melanocytic nevus |
| NRAS | Orphanet:648 | Noonan syndrome |
| NRAS | Orphanet:86834 | Juvenile myelomonocytic leukemia |
Cohort genes → proteins
4 cohort genes, 4 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|---|
| multi_evidence | 4 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|---|---|---|---|---|
| KRAS | HGNC:6407 | ENSG00000133703 | P01116 | GTPase KRas | gencc,clinvar |
| LRRC56 | HGNC:25430 | ENSG00000161328 | Q8IYG6 | Leucine-rich repeat-containing protein 56 | clinvar |
| HRAS | HGNC:5173 | ENSG00000174775 | P01112 | GTPase HRas | clinvar |
| NRAS | HGNC:7989 | ENSG00000213281 | P01111 | GTPase NRas | clinvar |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|---|---|
| KRAS | GTPase KRas | Ras proteins bind GDP/GTP and possess intrinsic GTPase activity. |
| LRRC56 | Leucine-rich repeat-containing protein 56 | Required for the assembly of dynein arms. |
| HRAS | GTPase HRas | Involved in the activation of Ras protein signal transduction. |
| NRAS | GTPase NRas | Ras proteins bind GDP/GTP and possess intrinsic GTPase activity. |
Protein-family classification
Druggable: 2 · Difficult: 0 · Unknown: 2 · Druggable fraction: 0.5
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|---|---|---|
| Enzyme (other) | 2 | 6.0× | 0.074 |
| Other/Unknown | 2 | 0.9× | 0.769 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|---|---|---|---|
| KRAS | Enzyme (other) | yes | 3.6.5.2 | Small_GTPase, Small_GTP-bd, Small_GTPase_Ras-type |
| LRRC56 | Other/Unknown | no | Leu-rich_rpt, Leu-rich_rpt_4, LRR_dom_sf | |
| HRAS | Enzyme (other) | yes | 3.6.5.2 | Small_GTPase, Small_GTP-bd, Small_GTPase_Ras-type |
| NRAS | Other/Unknown | no | Small_GTPase, Small_GTP-bd, Small_GTPase_Ras-type |
Expression context
Cohort genes with no expression data: 0.
4 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 0 |
| broad (>20) | 4 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|---|
| nipple | 1 |
| pylorus | 1 |
| trigeminal ganglion | 1 |
| left testis | 1 |
| right testis | 1 |
| right uterine tube | 1 |
| skin of abdomen | 1 |
| skin of leg | 1 |
| zone of skin | 1 |
| epithelium of nasopharynx | 1 |
| gingival epithelium | 1 |
| secondary oocyte | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|---|---|---|---|
| KRAS | 298 | ubiquitous | marker | trigeminal ganglion, pylorus, nipple |
| LRRC56 | 129 | broad | marker | right uterine tube, right testis, left testis |
| HRAS | 139 | ubiquitous | marker | skin of abdomen, skin of leg, zone of skin |
| NRAS | 278 | ubiquitous | marker | gingival epithelium, epithelium of nasopharynx, secondary oocyte |
Protein interactions among cohort
Intra-cohort edges: 1.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|---|
| KRAS | 14,509 |
| HRAS | 8,064 |
| NRAS | 7,598 |
| LRRC56 | 914 |
Intra-cohort edges
| A | B | Sources |
|---|---|---|
| KRAS | NRAS | intact |
Structural data
PDB: 3 · AlphaFold-only: 1 · No structure: 0
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|---|---|
| KRAS | P01116 | 511 |
| HRAS | P01112 | 246 |
| NRAS | P01111 | 35 |
AlphaFold-only cohort genes (top 30 by pLDDT)
| Symbol | UniProt | pLDDT |
|---|---|---|
| LRRC56 | Q8IYG6 | 56.07 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 73. Enrichment computed across 4 evidence-associated genes (3 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 3 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| Signaling by RAS GAP mutants | 3 | 3806.7× | 1e-10 | KRAS, HRAS, NRAS |
| Signaling by RAS GTPase mutants | 3 | 3806.7× | 1e-10 | KRAS, HRAS, NRAS |
| Activation of RAS in B cells | 3 | 2284.0× | 1e-09 | KRAS, HRAS, NRAS |
| RAS signaling downstream of NF1 loss-of-function variants | 3 | 1631.4× | 2e-09 | KRAS, HRAS, NRAS |
| Estrogen-stimulated signaling through PRKCZ | 3 | 1631.4× | 2e-09 | KRAS, HRAS, NRAS |
| SOS-mediated signalling | 3 | 1427.5× | 3e-09 | KRAS, HRAS, NRAS |
| Activated NTRK3 signals through RAS | 3 | 1268.9× | 4e-09 | KRAS, HRAS, NRAS |
| EGFR Transactivation by Gastrin | 3 | 1142.0× | 4e-09 | KRAS, HRAS, NRAS |
| SHC-related events triggered by IGF1R | 3 | 1142.0× | 4e-09 | KRAS, HRAS, NRAS |
| Activated NTRK2 signals through RAS | 3 | 1142.0× | 4e-09 | KRAS, HRAS, NRAS |
| MET activates RAS signaling | 3 | 1038.2× | 4e-09 | KRAS, HRAS, NRAS |
| Signaling by FGFR4 in disease | 3 | 951.7× | 5e-09 | KRAS, HRAS, NRAS |
| Activated NTRK2 signals through FRS2 and FRS3 | 3 | 951.7× | 5e-09 | KRAS, HRAS, NRAS |
| Constitutive Signaling by Overexpressed ERBB2 | 3 | 951.7× | 5e-09 | KRAS, HRAS, NRAS |
| p38MAPK events | 3 | 878.5× | 5e-09 | KRAS, HRAS, NRAS |
| Signaling by PDGFRA transmembrane, juxtamembrane and kinase domain mutants | 3 | 878.5× | 5e-09 | KRAS, HRAS, NRAS |
| Signaling by PDGFRA extracellular domain mutants | 3 | 878.5× | 5e-09 | KRAS, HRAS, NRAS |
| PTK6 Regulates RHO GTPases, RAS GTPase and MAP kinases | 3 | 815.7× | 6e-09 | KRAS, HRAS, NRAS |
| GRB2 events in EGFR signaling | 3 | 761.3× | 6e-09 | KRAS, HRAS, NRAS |
| Erythropoietin activates RAS | 3 | 761.3× | 6e-09 | KRAS, HRAS, NRAS |
| Signaling by FLT3 ITD and TKD mutants | 3 | 761.3× | 6e-09 | KRAS, HRAS, NRAS |
| SHC1 events in ERBB4 signaling | 3 | 713.8× | 7e-09 | KRAS, HRAS, NRAS |
| SHC1 events in EGFR signaling | 3 | 713.8× | 7e-09 | KRAS, HRAS, NRAS |
| Constitutive Signaling by EGFRvIII | 3 | 713.8× | 7e-09 | KRAS, HRAS, NRAS |
| Signalling to RAS | 3 | 671.8× | 7e-09 | KRAS, HRAS, NRAS |
| Insulin receptor signalling cascade | 3 | 671.8× | 7e-09 | KRAS, HRAS, NRAS |
| Signaling by ERBB2 ECD mutants | 3 | 671.8× | 7e-09 | KRAS, HRAS, NRAS |
| GRB2 events in ERBB2 signaling | 3 | 634.4× | 9e-09 | KRAS, HRAS, NRAS |
| Tie2 Signaling | 3 | 601.0× | 1e-08 | KRAS, HRAS, NRAS |
| SHC-mediated cascade:FGFR3 | 3 | 601.0× | 1e-08 | KRAS, HRAS, NRAS |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 4 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| Ras protein signal transduction | 3 | 154.1× | 3e-05 | KRAS, HRAS, NRAS |
| MAPK cascade | 3 | 114.9× | 4e-05 | KRAS, HRAS, NRAS |
| regulation of long-term neuronal synaptic plasticity | 2 | 495.6× | 1e-04 | KRAS, HRAS |
| neuron apoptotic process | 2 | 92.6× | 0.003 | KRAS, HRAS |
| response to mineralocorticoid | 1 | 4213.0× | 0.003 | KRAS |
| negative regulation of neuron apoptotic process | 2 | 55.4× | 0.006 | KRAS, HRAS |
| forebrain astrocyte development | 1 | 1404.3× | 0.006 | KRAS |
| positive regulation of miRNA metabolic process | 1 | 1404.3× | 0.006 | HRAS |
| response to isolation stress | 1 | 1053.2× | 0.007 | KRAS |
| response to gravity | 1 | 702.2× | 0.010 | KRAS |
| oncogene-induced cell senescence | 1 | 601.9× | 0.011 | HRAS |
| T-helper 1 type immune response | 1 | 468.1× | 0.012 | HRAS |
| type I pneumocyte differentiation | 1 | 383.0× | 0.014 | KRAS |
| myoblast proliferation | 1 | 351.1× | 0.014 | KRAS |
| positive regulation of cellular senescence | 1 | 324.1× | 0.014 | KRAS |
| negative regulation of epithelial cell differentiation | 1 | 300.9× | 0.014 | KRAS |
| Schwann cell development | 1 | 263.3× | 0.014 | HRAS |
| regulation of synaptic transmission, GABAergic | 1 | 263.3× | 0.014 | KRAS |
| striated muscle cell differentiation | 1 | 247.8× | 0.014 | KRAS |
| positive regulation of ruffle assembly | 1 | 247.8× | 0.014 | HRAS |
| glial cell proliferation | 1 | 221.7× | 0.014 | KRAS |
| regulation of neurotransmitter receptor localization to postsynaptic specialization membrane | 1 | 221.7× | 0.014 | HRAS |
| epithelial tube branching involved in lung morphogenesis | 1 | 210.7× | 0.014 | KRAS |
| positive regulation of glial cell proliferation | 1 | 175.5× | 0.017 | KRAS |
| positive regulation of Rac protein signal transduction | 1 | 162.0× | 0.017 | KRAS |
| defense response to protozoan | 1 | 150.5× | 0.017 | HRAS |
| cellular response to gamma radiation | 1 | 150.5× | 0.017 | HRAS |
| cardiac muscle cell proliferation | 1 | 145.3× | 0.017 | KRAS |
| Rac protein signal transduction | 1 | 140.4× | 0.017 | KRAS |
| positive regulation of protein targeting to membrane | 1 | 140.4× | 0.017 | HRAS |
Therapeutics
Drug target analysis
Approved (phase 4): 2 · Phase ≥3: 2 · Phased (≥1): 3 · Undrugged: 1
Druggability breadth: 3 of 4 evidence-associated genes (75%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Genes with an approved drug
The molecule shown is one approved compound that hits the gene — not necessarily a drug of choice or one indicated for this disease.
| Symbol | Example approved molecule |
|---|---|
| KRAS | VEMURAFENIB |
| HRAS | LONAFARNIB |
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|---|---|
| KRAS | 11 | 4 |
| HRAS | 4 | 4 |
| NRAS | 1 | 1 |
| LRRC56 | 0 | 0 |
Drugs targeting cohort genes (top 30)
| Molecule | Max phase | Targets in cohort |
|---|---|---|
| VEMURAFENIB | 4 | KRAS |
| DABRAFENIB | 4 | KRAS |
| LONAFARNIB | 4 | HRAS, KRAS |
| SOTORASIB | 4 | KRAS |
| ADAGRASIB | 4 | KRAS |
| OPNURASIB | 3 | KRAS |
| DIVARASIB | 2 | KRAS |
| GLECIRASIB | 2 | KRAS |
| STALLIMYCIN | 2 | HRAS |
| BMS-214662 | 1 | HRAS, KRAS |
| LY-3009120 | 1 | KRAS |
| MRTX-1133 | 1 | KRAS |
| L-778123 FREE BASE | 1 | HRAS, NRAS |
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 2.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|---|---|
| KRAS | 861 | Binding:829, Functional:32 |
| HRAS | 48 | Binding:45, Functional:3 |
| NRAS | 18 | Binding:18 |
Cohort enzymes (BRENDA EC)
| Symbol | EC numbers | Names |
|---|---|---|
| KRAS | 3.6.5.2 | small monomeric GTPase |
| HRAS | 3.6.5.2 | small monomeric GTPase |
Cohort genes with high screening signal
≥100 ChEMBL assays — a studied-ness signal; see Therapeutics for approved-drug status.
| Symbol | ChEMBL assays |
|---|---|
| KRAS | 861 |
Pharmacogenomics
Cohort genes with a PharmGKB record: 4; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Chemical tractability of cohort targets
13 approved/phased compounds have measured bioactivity against a cohort gene (and aren’t yet in disease-level trials). This is a research / tractability signal, NOT a therapeutic recommendation — a bioactivity row often reflects off-target or screening binding (e.g. promiscuous kinase inhibitors against a cohort kinase), implying no disease mechanism.
| Compound | Max phase | Cohort target (bioactivity) |
|---|---|---|
| VEMURAFENIB | 4 | KRAS |
| DABRAFENIB | 4 | KRAS |
| LONAFARNIB | 4 | HRAS, KRAS |
| SOTORASIB | 4 | KRAS |
| ADAGRASIB | 4 | KRAS |
| OPNURASIB | 3 | KRAS |
| DIVARASIB | 2 | KRAS |
| GLECIRASIB | 2 | KRAS |
| STALLIMYCIN | 2 | HRAS |
| BMS-214662 | 1 | HRAS, KRAS |
| LY-3009120 | 1 | KRAS |
| MRTX-1133 | 1 | KRAS |
| L-778123 FREE BASE | 1 | HRAS, NRAS |
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|---|---|---|
| A | Approved (phase 4 drug) | 2 | KRAS, HRAS |
| B | Phased (≥1) drug, not yet approved | 1 | NRAS |
| C | Druggable family + PDB, no drug | 0 | |
| D | Druggable family + AlphaFold only, no drug | 0 | |
| E | Difficult family or no structure, no drug | 1 | LRRC56 |
Undrugged target profiles
1 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
| Symbol | ChEMBL assays | Drugged partners (top 3) |
|---|---|---|
| LRRC56 | 0 | — |
Clinical trials & evidence
Clinical trials
Clinical trials: 3.
Phase distribution (across all retrieved trials)
| Phase | Trials |
|---|---|
| PHASE4 | 1 |
| PHASE2 | 1 |
| EARLY_PHASE1 | 1 |
Top trials by phase / activity
| NCT | Phase | Status | Title |
|---|---|---|---|
| NCT04320316 | PHASE4 | COMPLETED | A Trial to Assess the Safety and Efficacy of KRN23 in Epidermal Nevus Syndrome (ENS) |
| NCT02304367 | PHASE2 | COMPLETED | Study of Burosumab (KRN23) in Adults With Tumor-Induced Osteomalacia (TIO) or Epidermal Nevus Syndrome (ENS) |
| NCT03993821 | EARLY_PHASE1 | UNKNOWN | Burosumab for CSHS |
Drugs tested across these trials (top 30)
| Molecule | Max phase | Trials referencing |
|---|---|---|
| BUROSUMAB | 4 | 2 |