Summary
Malignant epithelial tumor of ovary (MONDO:0018364) is a cancer (an umbrella term covering 6 Mondo subtypes) with 28 cohort genes (32 GWAS associations across 5 studies; 2 CIViC-evidence somatic drivers) and 130 clinical trials. Top therapeutic interventions include lapatinib, erlotinib, and sorafenib.
At a glance
- Classification: Cancer
- Prevalence: 1-9 / 100 000 (Europe) [Orphanet-validated]
- Umbrella term: 6 Mondo subtypes
- Cohort genes: 28
- GWAS associations: 32
- Clinical trials: 130
Clinical features
Epidemiology
Prevalence records
1 prevalence record(s), Orphanet:
| Type | Class | Value | Geography | Validation |
|---|
| Annual incidence | 1-9 / 100 000 | 9.39 | Europe | Validated |
Identifiers
Disease identifiers
| Field | Value |
|---|
| Canonical name | malignant epithelial tumor of ovary |
| Mondo ID | MONDO:0018364 |
| MeSH | C538090 |
| Orphanet | 398934 |
| DOID | DOID:2151 |
| NCIT | C40026 |
| SNOMED CT | 254849005 |
| UMLS | C0346161 |
| MedGen | 577291 |
| GARD | 0009362 |
| Is cancer (heuristic) | yes |
Also known as: epithelial cancer of ovary · malignant ovarian epithelial tumor · malignant ovarian epithelial tumour · malignant ovarian surface epithelial-stromal neoplasm · malignant ovarian surface epithelial-stromal tumor · malignant ovarian surface epithelial-stromal tumour · ovarian epithelial cancer · ovarian epithelial tumor, malignant · ovarian malignant epithelial tumor · ovarian malignant epithelial tumour · ovarian stromal cancer
Data availability: 32 GWAS associations (5 studies) · 3 cell lines.
Disease family
An umbrella term covering 6 Mondo subtypes.
Classification path: disease › human disease › disease by etiologic mechanism › cancer or benign tumor › neoplastic disease or syndrome › neoplasm › epithelial neoplasm › ovarian epithelial tumor › malignant epithelial tumor of ovary
Related subtypes (10): ovarian Brenner tumor, ovarian squamous cell neoplasm, ovarian mucinous neoplasm, ovarian seromucinous tumor, ovarian papillary tumor, ovarian mucinous adenofibroma, ovarian adenoma benign, borderline epithelial tumor of ovary, ovarian clear cell tumor, ovarian serous tumor
Subtypes (6): ovarian clear cell cancer, malignant ovarian Brenner tumor, ovarian endometrial cancer, ovarian carcinoma, mucinous ovarian cancer, malignant ovarian serous tumor
Genetics & variants
GWAS landscape
32 GWAS associations across 5 studies. Top hits map to 23 distinct genes (as reported by GWAS).
Top associations by p-value
| rsID | p-value | Gene | Risk allele | Odds ratio |
|---|
| rs7651446 | 6e-51 | TIPARP, TIPARP-AS1 | A | 1.59 |
| rs3814113 | 6e-50 | BNC2 - RN7SL720P | G | 1.27 |
| rs10088218 | 1e-20 | LINC00824 | A | 1.3 |
| rs9303542 | 5e-15 | SKAP1 | G | 1.14 |
| rs8170 | 5e-14 | BABAM1, USHBP1 | A | 1.18 |
| rs2072590 | 9e-14 | HAGLR, HAGLROS | A | 1.14 |
| rs183211 | 2e-13 | NSF | A | 1.11 |
| rs12039431 | 1e-11 | RSPO1 | ? | 1.11 |
| rs11782652 | 3e-10 | CHMP4C | G | |
| rs1243180 | 1e-09 | MLLT10 | A | 1.1 |
| rs10069690 | 9e-09 | TERT | A | 1.14 |
| rs8044477 | 1e-08 | RPL12P36 - Metazoa_SRP | ? | 1.1 |
| rs1413299 | 2e-08 | COL15A1 | C | 1.2 |
| rs3820282 | 2e-08 | WNT4 | ? | 1.11 |
| rs17329882 | 2e-08 | SYNPO2 | ? | 1.09 |
| rs757210 | 2e-08 | HNF1B | A | 1.11 |
| rs1192691 | 3e-08 | Y_RNA - MKNK2P1 | C | 1.23 |
| rs115344852 | 3e-08 | GPX6 | ? | 1.1 |
| rs11175194 | 1e-07 | SRGAP1 | G | 1.19 |
| rs4525119 | 5e-07 | AKR1C3 | C | 1.43 |
| rs7643459 | 8e-07 | LMCD1-AS1 | T | 1.4 |
| rs633862 | 9e-07 | ABO - Y_RNA | A | 1.19 |
| rs4286604 | 9e-07 | UGT2B4 - UGT2A2 | G | 1.45 |
| rs142091544 | 9e-07 | TENM2-AS1 - WWC1 | T | 3.22 |
| rs10017134 | 1e-06 | UGT2A1, UGT2A2 | C | 1.4 |
| rs2500488 | 4e-06 | ZBTB18 - RN7SL148P | C | 1.47 |
| rs6976769 | 4e-06 | RAD23BP2 - SEMA3A | C | 1.46 |
Top studies (by case count)
| Study | Lead author | Year | Cases | Controls | Title |
|---|
| GCST002748 | Kuchenbaecker KB | 2015 | 4,368 | 9,123 | Identification of six new susceptibility loci for invasive epithelial ovarian cancer. |
| GCST002576 | Chen K | 2014 | 1,044 | 1,172 | Genome-wide association study identifies new susceptibility loci for epithelial ovarian cancer in Han Chinese women. |
| GCST009008 | Manichaikul A | 2019 | 755 | 1,235 | Identification of novel epithelial ovarian cancer loci in Women of African Ancestry. |
| GCST009896 | Grant DJ | 2019 | 755 | 1,235 | Evaluation of vitamin D biosynthesis and pathway target genes reveals UGT2A1/2 and EGFR polymorphisms associated with epithelial ovarian cancer in African American Women. |
| GCST002267 | Earp MA | 2013 | 84 | 0 | Genome-wide association study of subtype-specific epithelial ovarian cancer risk alleles using pooled DNA. |
Variant details and genetic-evidence tiers
Tier distribution (top 50 variants)
| Tier | Variants |
|---|
| Tier 1: coding | 0 |
| Tier 2: splice/UTR | 0 |
| Tier 3: regulatory | 0 |
| Tier 4: intronic/intergenic | 27 |
MAF distribution
| Bucket | Variants |
|---|
| common (>=0.05) | 25 |
| low_freq (0.01-0.05) | 1 |
| rare (<0.01) | 0 |
| unknown | 1 |
Functional consequences
| Consequence | Count |
|---|
| intron_variant | 19 |
| intergenic_variant | 6 |
| synonymous_variant | 1 |
| non_coding_transcript_exon_variant | 1 |
Top variants
| rsID | Chr | Pos | Alleles | MAF | Consequence | Gene | p-value | Tier |
|---|
| rs7651446 | 3 | 156689208 | G>T | 0.05 | intron_variant | TIPARP, TIPARP-AS1 | 6e-51 | Tier 4: intronic/intergenic |
| rs3814113 | 9 | 16915023 | T>C | 0.32 | intergenic_variant | BNC2 - RN7SL720P | 6e-50 | Tier 4: intronic/intergenic |
| rs10088218 | 8 | 128531703 | G>A | 0.13 | intron_variant | LINC00824 | 1e-20 | Tier 4: intronic/intergenic |
| rs9303542 | 17 | 48334138 | A>G | 0.27 | intron_variant | SKAP1 | 5e-15 | Tier 4: intronic/intergenic |
| rs8170 | 19 | 17278895 | G>A,C,T | 0.19 | synonymous_variant | BABAM1, USHBP1 | 5e-14 | Tier 4: intronic/intergenic |
| rs2072590 | 2 | 176177905 | A>C,G,T | 0.32 | non_coding_transcript_exon_variant | HAGLR, HAGLROS | 9e-14 | Tier 4: intronic/intergenic |
| rs183211 | 17 | 46710944 | G>A,C,T | 0.24 | intron_variant | NSF | 2e-13 | Tier 4: intronic/intergenic |
| rs12039431 | 1 | 37616450 | G>A | 0.05 | intron_variant | RSPO1 | 1e-11 | Tier 4: intronic/intergenic |
| rs11782652 | 8 | 81741409 | A>G,T | 0.07 | intron_variant | CHMP4C | 3e-10 | Tier 4: intronic/intergenic |
| rs1243180 | 10 | 21626690 | T>A,G | 0.31 | intron_variant | MLLT10 | 1e-09 | Tier 4: intronic/intergenic |
| rs10069690 | 5 | 1279675 | C>T | 0.26 | intron_variant | TERT | 9e-09 | Tier 4: intronic/intergenic |
| rs8044477 | 16 | 58942687 | A>C,G | 0.05 | intron_variant | RPL12P36 - Metazoa_SRP | 1e-08 | Tier 4: intronic/intergenic |
| rs1413299 | 9 | 98998959 | G>A,C,T | 0.38 | intron_variant | COL15A1 | 2e-08 | Tier 4: intronic/intergenic |
| rs3820282 | 1 | 22141722 | C>A,G,T | 0.05 | intron_variant | WNT4 | 2e-08 | Tier 4: intronic/intergenic |
| rs17329882 | 4 | 119028805 | A>C,T | 0.05 | intron_variant | SYNPO2 | 2e-08 | Tier 4: intronic/intergenic |
| rs757210 | 17 | 37736525 | C>A,G,T | 0.37 | intron_variant | HNF1B | 2e-08 | Tier 4: intronic/intergenic |
| rs1192691 | 10 | 36880367 | G>A,C,T | 0.46 | intergenic_variant | Y_RNA - MKNK2P1 | 3e-08 | Tier 4: intronic/intergenic |
| rs115344852 | 6 | 28518321 | | | intergenic_variant | GPX6 | 3e-08 | Tier 4: intronic/intergenic |
| rs11175194 | 12 | 63871057 | G>A,C | 0.41 | intron_variant | SRGAP1 | 1e-07 | Tier 4: intronic/intergenic |
| rs4525119 | 10 | 5049762 | C>T | 0.331 | intron_variant | AKR1C3 | 5e-07 | Tier 4: intronic/intergenic |
| rs7643459 | 3 | 7963141 | G>C,T | 0.362 | intron_variant | LMCD1-AS1 | 8e-07 | Tier 4: intronic/intergenic |
| rs633862 | 9 | 133279871 | T>A,C | 0.46 | intergenic_variant | ABO - Y_RNA | 9e-07 | Tier 4: intronic/intergenic |
| rs4286604 | 4 | 69576447 | A>G,T | 0.268 | intron_variant | UGT2B4 - UGT2A2 | 9e-07 | Tier 4: intronic/intergenic |
| rs142091544 | 5 | 168286995 | C>A,G,T | 0.034 | intergenic_variant | TENM2-AS1 - WWC1 | 9e-07 | Tier 4: intronic/intergenic |
| rs10017134 | 4 | 69591303 | T>A,C | 0.27 | intron_variant | UGT2A1, UGT2A2 | 1e-06 | Tier 4: intronic/intergenic |
| rs2500488 | 1 | 244077146 | C>G,T | 0.33 | intron_variant | ZBTB18 - RN7SL148P | 4e-06 | Tier 4: intronic/intergenic |
| rs6976769 | 7 | 83667946 | A>C,G | 0.05 | intergenic_variant | RAD23BP2 - SEMA3A | 4e-06 | Tier 4: intronic/intergenic |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 0 · Orphanet: 34 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
Somatic driver evidence (intOGen + CIViC, cohort fanout)
| Gene | intOGen role | Cancer types | CIViC |
|---|
| TERT | Act | PRCC | CIViC #79 |
| TGFBR1 | LoF | ESCA | |
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|
| SEMA3E | Orphanet:138 | CHARGE syndrome |
| HNF1B | Orphanet:1309 | Medullary sponge kidney |
| HNF1B | Orphanet:1331 | Familial prostate cancer |
| HNF1B | Orphanet:2578 | Mayer-Rokitansky-Küster-Hauser syndrome type 2 |
| HNF1B | Orphanet:261265 | 17q12 microdeletion syndrome |
| HNF1B | Orphanet:93111 | HNF1B-related autosomal dominant tubulointerstitial kidney disease |
| HNF1B | Orphanet:93172 | Renal dysplasia, unilateral |
| HNF1B | Orphanet:93173 | Renal dysplasia, bilateral |
| HNF1B | Orphanet:97363 | Unilateral multicystic dysplastic kidney |
| HNF1B | Orphanet:97364 | Bilateral multicystic dysplastic kidney |
| TERT | Orphanet:146 | Differentiated thyroid carcinoma |
| TERT | Orphanet:1501 | Adrenocortical carcinoma |
| TERT | Orphanet:1775 | Dyskeratosis congenita |
| TERT | Orphanet:2032 | Idiopathic pulmonary fibrosis |
| TERT | Orphanet:2495 | Meningioma |
| TERT | Orphanet:3322 | Hoyeraal-Hreidarsson syndrome |
| TERT | Orphanet:457246 | Clear cell sarcoma of kidney |
| TERT | Orphanet:618 | Familial melanoma |
| TERT | Orphanet:88 | Idiopathic aplastic anemia |
| TGFBR1 | Orphanet:284973 | Marfan syndrome type 2 |
| TGFBR1 | Orphanet:60030 | Loeys-Dietz syndrome |
| TGFBR1 | Orphanet:65748 | Multiple self-healing squamous epithelioma |
| TGFBR1 | Orphanet:91387 | Familial thoracic aortic aneurysm and aortic dissection |
| WNT4 | Orphanet:139466 | SERKAL syndrome |
| WNT4 | Orphanet:247768 | Müllerian aplasia and hyperandrogenism |
| WNT4 | Orphanet:2578 | Mayer-Rokitansky-Küster-Hauser syndrome type 2 |
| ZBTB18 | Orphanet:36367 | Distal deletion 1q syndrome |
| MLLT10 | Orphanet:99861 | Precursor T-cell acute lymphoblastic leukemia |
| RSPO1 | Orphanet:85112 | Palmoplantar keratoderma-XX sex reversal-predisposition to squamous cell carcinoma syndrome |
| PLEKHM1 | Orphanet:210110 | Intermediate osteopetrosis |
| BNC2 | Orphanet:93110 | Posterior urethral valve |
| ABCB4 | Orphanet:69663 | Low phospholipid-associated cholelithiasis |
| ABCB4 | Orphanet:69665 | Intrahepatic cholestasis of pregnancy |
| ABCB4 | Orphanet:79305 | Progressive familial intrahepatic cholestasis type 3 |
Cohort genes → proteins
28 cohort genes, 27 distinct canonical proteins.
Evidence partition
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|
| SEMA3E | HGNC:10727 | ENSG00000170381 | O15041 | Semaphorin-3E | gwas |
| SURF6 | HGNC:11478 | ENSG00000148296 | O75683 | Surfeit locus protein 6 | gwas |
| HNF1B | HGNC:11630 | ENSG00000275410 | P35680 | Hepatocyte nuclear factor 1-beta | gwas |
| TERT | HGNC:11730 | ENSG00000164362 | O14746 | Telomerase reverse transcriptase | gwas |
| TGFBR1 | HGNC:11772 | ENSG00000106799 | P36897 | TGF-beta receptor type-1 | gwas |
| WNT4 | HGNC:12783 | ENSG00000162552 | P56705 | Protein Wnt-4 | gwas |
| ZBTB18 | HGNC:13030 | ENSG00000179456 | Q99592 | Zinc finger and BTB domain-containing protein 18 | gwas |
| SKAP1 | HGNC:15605 | ENSG00000141293 | Q86WV1 | Src kinase-associated phosphoprotein 1 | gwas |
| MLLT10 | HGNC:16063 | ENSG00000078403 | P55197 | Protein AF-10 | gwas |
| ANKRD30A | HGNC:17234 | ENSG00000148513 | Q9BXX3 | Ankyrin repeat domain-containing protein 30A | gwas |
| SRGAP1 | HGNC:17382 | ENSG00000196935 | Q7Z6B7 | SLIT-ROBO Rho GTPase-activating protein 1 | gwas |
| NAMPTP1 | HGNC:17633 | ENSG00000229644 | | nicotinamide phosphoribosyltransferase pseudogene 1 | gwas |
| SYNPO2 | HGNC:17732 | ENSG00000172403 | Q9UMS6 | Synaptopodin-2 | gwas |
| RSPO1 | HGNC:21679 | ENSG00000169218 | Q2MKA7 | R-spondin-1 | gwas |
| COL15A1 | HGNC:2192 | ENSG00000204291 | P39059 | Collagen alpha-1(XV) chain | gwas |
| TIPARP | HGNC:23696 | ENSG00000163659 | Q7Z3E1 | Protein mono-ADP-ribosyltransferase TIPARP | gwas |
| BABAM1 | HGNC:25008 | ENSG00000105393 | Q9NWV8 | BRISC and BRCA1-A complex member 1 | gwas |
| UGT2A2 | HGNC:28183 | ENSG00000271271 | P0DTE5 | UDP-glucuronosyltransferase 2A2 | gwas |
| PLEKHM1 | HGNC:29017 | ENSG00000225190 | Q9Y4G2 | Pleckstrin homology domain-containing family M member 1 | gwas |
| ADSS2 | HGNC:292 | ENSG00000035687 | P30520 | Adenylosuccinate synthetase isozyme 2 | gwas |
| WWC1 | HGNC:29435 | ENSG00000113645 | Q8IX03 | Protein KIBRA | gwas |
| CHMP4C | HGNC:30599 | ENSG00000164695 | Q96CF2 | Charged multivesicular body protein 4c | gwas |
| BNC2 | HGNC:30988 | ENSG00000173068 | Q6ZN30 | Zinc finger protein basonuclin-2 | gwas |
| AKR1C3 | HGNC:386 | ENSG00000196139 | P42330 | Aldo-keto reductase family 1 member C3 | gwas |
| ABCB4 | HGNC:45 | ENSG00000005471 | P21439 | Phosphatidylcholine translocator ABCB4 | gwas |
| GPX6 | HGNC:4558 | ENSG00000198704 | P59796 | Glutathione peroxidase 6 | gwas |
| HOXD1 | HGNC:5132 | ENSG00000128645 | Q9GZZ0 | Homeobox protein Hox-D1 | gwas |
| ABO | HGNC:79 | ENSG00000175164 | P16442 | Histo-blood group ABO system transferase | gwas |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|
| SEMA3E | Semaphorin-3E | Plays an important role in signaling via the cell surface receptor PLXND1. |
| SURF6 | Surfeit locus protein 6 | Binds to both DNA and RNA in vitro, with a stronger binding capacity for RNA. |
| HNF1B | Hepatocyte nuclear factor 1-beta | Transcription factor that binds to the inverted palindrome 5’-GTTAATNATTAAC-3'. |
| TERT | Telomerase reverse transcriptase | Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. |
| TGFBR1 | TGF-beta receptor type-1 | Transmembrane serine/threonine kinase forming with the TGF-beta type II serine/threonine kinase receptor, TGFBR2, the non-promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. |
| WNT4 | Protein Wnt-4 | Ligand for members of the frizzled family of seven transmembrane receptors. |
| ZBTB18 | Zinc finger and BTB domain-containing protein 18 | Transcriptional repressor that plays a role in various developmental processes such as myogenesis and brain development. |
| SKAP1 | Src kinase-associated phosphoprotein 1 | Positively regulates T-cell receptor signaling by enhancing the MAP kinase pathway. |
| MLLT10 | Protein AF-10 | Probably involved in transcriptional regulation. |
| SRGAP1 | SLIT-ROBO Rho GTPase-activating protein 1 | GTPase-activating protein for RhoA and Cdc42 small GTPases. |
| SYNPO2 | Synaptopodin-2 | Has an actin-binding and actin-bundling activity. |
| RSPO1 | R-spondin-1 | Activator of the canonical Wnt signaling pathway by acting as a ligand for LGR4-6 receptors. |
| COL15A1 | Collagen alpha-1(XV) chain | Structural protein that stabilizes microvessels and muscle cells, both in heart and in skeletal muscle. |
| TIPARP | Protein mono-ADP-ribosyltransferase TIPARP | ADP-ribosyltransferase that mediates mono-ADP-ribosylation of glutamate, aspartate and cysteine residues on target proteins. |
| BABAM1 | BRISC and BRCA1-A complex member 1 | Component of the BRCA1-A complex, a complex that specifically recognizes ‘Lys-63’-linked ubiquitinated histones H2A and H2AX at DNA lesions sites, leading to target the BRCA1-BARD1 heterodimer to sites of DNA damage at double-strand breaks… |
| UGT2A2 | UDP-glucuronosyltransferase 2A2 | UDP-glucuronosyltransferase (UGT) that catalyzes phase II biotransformation reactions in which lipophilic substrates are conjugated with glucuronic acid to increase the metabolite’s water solubility, thereby facilitating excretion into eit… |
| PLEKHM1 | Pleckstrin homology domain-containing family M member 1 | Acts as a multivalent adapter protein that regulates Rab7-dependent and HOPS complex-dependent fusion events in the endolysosomal system and couples autophagic and the endocytic trafficking pathways. |
| ADSS2 | Adenylosuccinate synthetase isozyme 2 | Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. |
| WWC1 | Protein KIBRA | Regulator of the Hippo signaling pathway, also known as the Salvador-Warts-Hippo (SWH) pathway. |
| CHMP4C | Charged multivesicular body protein 4c | Probable core component of the endosomal sorting required for transport complex III (ESCRT-III) which is involved in multivesicular bodies (MVBs) formation and sorting of endosomal cargo proteins into MVBs. |
| BNC2 | Zinc finger protein basonuclin-2 | Probable transcription factor specific for skin keratinocytes. |
| AKR1C3 | Aldo-keto reductase family 1 member C3 | Cytosolic aldo-keto reductase that catalyzes NADPH-dependent reduction of ketosteroids to hydroxysteroids. |
| ABCB4 | Phosphatidylcholine translocator ABCB4 | Energy-dependent phospholipid efflux translocator that acts as a positive regulator of biliary lipid secretion. |
| HOXD1 | Homeobox protein Hox-D1 | Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. |
| ABO | Histo-blood group ABO system transferase | This protein is the basis of the ABO blood group system. |
Protein-family classification
Druggable: 6 · Difficult: 12 · Unknown: 10 · Druggable fraction: 0.21
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|
| Scaffold/PPI | 6 | 3.7× | 0.032 |
| Transcription factor | 6 | 1.8× | 0.402 |
| Transporter | 1 | 2.8× | 0.709 |
| Enzyme (other) | 3 | 1.3× | 0.730 |
| Antibody/Immunoglobulin | 1 | 1.0× | 0.750 |
| Kinase | 1 | 1.0× | 0.750 |
| Other/Unknown | 10 | 0.6× | 0.990 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|
| SEMA3E | Antibody/Immunoglobulin | yes | | Semap_dom, Ig-like_dom, Immunoglobulin_dom |
| SURF6 | Other/Unknown | no | | SURF6, Rrp14/SURF6_C |
| HNF1B | Transcription factor | no | | HD, HNF1b_C, HNF-1_N |
| TERT | Other/Unknown | no | | RT_dom, Telomerase_RT, Telomerase_RBD |
| TGFBR1 | Kinase | yes | 2.7.10.2 | TGFB_receptor, Activin_recp, Prot_kinase_dom |
| WNT4 | Other/Unknown | no | | Wnt, Wnt4, Wnt_CS |
| ZBTB18 | Transcription factor | no | | BTB/POZ_dom, SKP1/BTB/POZ_sf, Znf_C2H2_type |
| SKAP1 | Scaffold/PPI | no | | SH3_domain, PH_domain, PH-like_dom_sf |
| MLLT10 | Transcription factor | no | | Znf_PHD, Znf_FYVE_PHD, Znf_RING/FYVE/PHD |
| ANKRD30A | Scaffold/PPI | no | | Ankyrin_rpt, Ankyrin_rpt-contain_sf, CC144C-like_CC_dom |
| SRGAP1 | Scaffold/PPI | no | | RhoGAP_dom, FCH_dom, SH3_domain |
| NAMPTP1 | Other/Unknown | no | | |
| SYNPO2 | Scaffold/PPI | no | | PDZ, PDZ_sf, Synaptopodin_domain |
| RSPO1 | Other/Unknown | no | | TSP1_rpt, Furin_repeat, Growth_fac_rcpt_cys_sf |
| COL15A1 | Other/Unknown | no | | Collagen, Collagenase_NC10/endostatin, ConA-like_dom_sf |
| TIPARP | Transcription factor | no | 2.4.2.30 | Znf_CCCH, WWE_dom, Poly(ADP-ribose)pol_cat_dom |
| BABAM1 | Other/Unknown | no | | BABAM1, vWFA_dom_sf |
| UGT2A2 | Other/Unknown | no | | UDP_glucos_trans, UDP_glycos_trans_CS, UDP-glycosyltransferase |
| PLEKHM1 | Scaffold/PPI | no | | PH_domain, PKC_DAG/PE, Run_dom |
| ADSS2 | Other/Unknown | no | | Adenylosuccinate_synthetase, Adenylosuccin_syn_GTP-bd, P-loop_NTPase |
| WWC1 | Scaffold/PPI | no | | C2_dom, WW_dom, C2_domain_sf |
| CHMP4C | Other/Unknown | no | | Snf7_fam |
| BNC2 | Transcription factor | no | | Znf_C2H2_type, Disconnected-like |
| AKR1C3 | Enzyme (other) | yes | 1.1.1.188 | Aldo/ket_reductase_CS, AKR, NADP_OxRdtase_dom |
| ABCB4 | Transporter | yes | | ABC_transporter-like_ATP-bd, AAA+_ATPase, ABC1_TM_dom |
| GPX6 | Enzyme (other) | yes | 1.11.1.9 | Glutathione_peroxidase, GPX_AS, GPX_CS |
| HOXD1 | Transcription factor | no | | HD, Homeodomain-like_sf, Homeobox_CS |
| ABO | Enzyme (other) | yes | 2.4.1.37 | Glyco_trans_6, Nucleotide-diphossugar_trans |
Expression context
Cohort genes with no expression data: 0.
23 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 2 |
| broad (>20) | 26 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|
| buccal mucosa cell | 4 |
| cortical plate | 3 |
| right lobe of liver | 3 |
| male germ line stem cell (sensu Vertebrata) in testis | 3 |
| sural nerve | 2 |
| type B pancreatic cell | 2 |
| saphenous vein | 2 |
| blood | 2 |
| germinal epithelium of ovary | 2 |
| oocyte | 2 |
| secondary oocyte | 2 |
| olfactory segment of nasal mucosa | 2 |
| jejunal mucosa | 2 |
| primordial germ cell in gonad | 2 |
| blood vessel layer | 1 |
| calcaneal tendon | 1 |
| gastrocnemius | 1 |
| mucosa of transverse colon | 1 |
| adult mammalian kidney | 1 |
| kidney | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|
| SEMA3E | 197 | broad | marker | cortical plate, calcaneal tendon, blood vessel layer |
| SURF6 | 134 | ubiquitous | marker | sural nerve, mucosa of transverse colon, gastrocnemius |
| HNF1B | 74 | broad | marker | metanephros cortex, adult mammalian kidney, kidney |
| TERT | 105 | broad | yes | stromal cell of endometrium, type B pancreatic cell, olfactory bulb |
| TGFBR1 | 269 | ubiquitous | marker | saphenous vein, tibia, visceral pleura |
| WNT4 | 177 | broad | marker | islet of Langerhans, decidua, type B pancreatic cell |
| ZBTB18 | 292 | ubiquitous | marker | cerebellar vermis, paraflocculus, cortical plate |
| SKAP1 | 189 | broad | marker | granulocyte, right lobe of liver, right uterine tube |
| MLLT10 | 275 | ubiquitous | marker | buccal mucosa cell, adult organism, colonic epithelium |
| ANKRD30A | 69 | tissue_specific | marker | epithelium of mammary gland, mammary duct, male germ line stem cell (sensu Vertebrata) in testis |
| SRGAP1 | 236 | ubiquitous | marker | buccal mucosa cell, cortical plate, medial globus pallidus |
| NAMPTP1 | 132 | | marker | blood, bone marrow cell, bone marrow |
| SYNPO2 | 262 | ubiquitous | marker | cauda epididymis, saphenous vein, seminal vesicle |
| RSPO1 | 129 | tissue_specific | yes | endocervix, body of uterus, germinal epithelium of ovary |
| COL15A1 | 249 | broad | marker | skin of hip, placenta, synovial joint |
| TIPARP | 283 | ubiquitous | marker | secondary oocyte, oocyte, upper leg skin |
| BABAM1 | 278 | ubiquitous | marker | prefrontal cortex, right frontal lobe, anterior cingulate cortex |
| UGT2A2 | 17 | | yes | male germ line stem cell (sensu Vertebrata) in testis, olfactory segment of nasal mucosa, right lobe of liver |
| PLEKHM1 | 134 | broad | yes | lower esophagus mucosa, esophagus mucosa, blood |
| ADSS2 | 285 | ubiquitous | marker | monocyte, mononuclear cell, leukocyte |
| WWC1 | 268 | ubiquitous | marker | ventricular zone, parotid gland, buccal mucosa cell |
| CHMP4C | 196 | ubiquitous | marker | amniotic fluid, jejunal mucosa, ileal mucosa |
| BNC2 | 229 | ubiquitous | marker | germinal epithelium of ovary, sural nerve, parietal pleura |
| AKR1C3 | 285 | ubiquitous | marker | jejunal mucosa, pancreatic ductal cell, gall bladder |
| ABCB4 | 188 | broad | marker | right lobe of liver, secondary oocyte, oocyte |
| GPX6 | 12 | ubiquitous | yes | male germ line stem cell (sensu Vertebrata) in testis, primordial germ cell in gonad, olfactory segment of nasal mucosa |
| HOXD1 | 185 | broad | marker | corpus epididymis, primordial germ cell in gonad, metanephric glomerulus |
| ABO | 169 | broad | marker | tendon of biceps brachii, buccal mucosa cell, right lobe of thyroid gland |
Protein interactions among cohort
Intra-cohort edges: 2.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|
| TERT | 5,717 |
| TGFBR1 | 4,828 |
| GPX6 | 3,286 |
| CHMP4C | 2,775 |
| ADSS2 | 2,681 |
| TIPARP | 2,481 |
| SURF6 | 2,470 |
| WNT4 | 2,347 |
| ABCB4 | 2,333 |
| RSPO1 | 2,160 |
Intra-cohort edges
| A | B | Sources |
|---|
| HNF1B | MLLT10 | biogrid_interaction, intact |
| RSPO1 | WNT4 | string_interaction |
Structural data
PDB: 18 · AlphaFold-only: 9 · No structure: 1
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|
| ABO | P16442 | 151 |
| AKR1C3 | P42330 | 67 |
| TGFBR1 | P36897 | 44 |
| TERT | O14746 | 23 |
| RSPO1 | Q2MKA7 | 12 |
| MLLT10 | P55197 | 6 |
| PLEKHM1 | Q9Y4G2 | 5 |
| WWC1 | Q8IX03 | 5 |
| SURF6 | O75683 | 4 |
| CHMP4C | Q96CF2 | 4 |
| ABCB4 | P21439 | 4 |
| HNF1B | P35680 | 3 |
| BABAM1 | Q9NWV8 | 3 |
| ZBTB18 | Q99592 | 1 |
| SKAP1 | Q86WV1 | 1 |
| ANKRD30A | Q9BXX3 | 1 |
| COL15A1 | P39059 | 1 |
| ADSS2 | P30520 | 1 |
AlphaFold-only cohort genes (top 30 by pLDDT)
| Symbol | UniProt | pLDDT |
|---|
| UGT2A2 | P0DTE5 | 92.46 |
| WNT4 | P56705 | 91.41 |
| SEMA3E | O15041 | 84.62 |
| SRGAP1 | Q7Z6B7 | 73.49 |
| TIPARP | Q7Z3E1 | 70.00 |
| HOXD1 | Q9GZZ0 | 61.63 |
| BNC2 | Q6ZN30 | 54.10 |
| SYNPO2 | Q9UMS6 | 49.86 |
| GPX6 | P59796 | |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 121. Enrichment computed across 28 evidence-associated genes (18 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 18 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|
| Nephron development | 2 | 97.6× | 0.022 | HNF1B, WNT4 |
| TCF dependent signaling in response to WNT | 3 | 19.6× | 0.027 | TERT, WNT4, RSPO1 |
| Defective ABCB4 causes PFIC3, ICP3 and GBD1 | 1 | 634.4× | 0.064 | ABCB4 |
| Loss of Function of TGFBR2 in Cancer | 1 | 211.5× | 0.084 | TGFBR1 |
| TGFBR2 Kinase Domain Mutants in Cancer | 1 | 211.5× | 0.084 | TGFBR1 |
| TGFBR1 LBD Mutants in Cancer | 1 | 158.6× | 0.084 | TGFBR1 |
| Loss of Function of TGFBR1 in Cancer | 1 | 126.9× | 0.084 | TGFBR1 |
| Loss of Function of SMAD2/3 in Cancer | 1 | 105.7× | 0.084 | TGFBR1 |
| Signaling by TGF-beta Receptor Complex in Cancer | 1 | 105.7× | 0.084 | TGFBR1 |
| SMAD2/3 Phosphorylation Motif Mutants in Cancer | 1 | 105.7× | 0.084 | TGFBR1 |
| TGFBR1 KD Mutants in Cancer | 1 | 105.7× | 0.084 | TGFBR1 |
| Regulation of MITF-M-dependent genes involved in DNA replication, damage repair and senescence | 1 | 90.6× | 0.084 | TERT |
| Regulation of gene expression in early pancreatic precursor cells | 1 | 79.3× | 0.084 | HNF1B |
| Inactivation of CDC42 and RAC1 | 1 | 79.3× | 0.084 | SRGAP1 |
| TGFBR3 regulates TGF-beta signaling | 1 | 79.3× | 0.084 | TGFBR1 |
| Deubiquitination | 2 | 13.8× | 0.084 | TGFBR1, BABAM1 |
| Signaling by WNT | 2 | 12.4× | 0.084 | TERT, RSPO1 |
| Signal Transduction | 6 | 3.4× | 0.084 | TERT, TGFBR1, SRGAP1, RSPO1, WWC1, AKR1C3 |
| Purine ribonucleoside monophosphate biosynthesis | 1 | 57.7× | 0.103 | ADSS2 |
| Synthesis of bile acids and bile salts via 24-hydroxycholesterol | 1 | 48.8× | 0.103 | AKR1C3 |
| Translation of Replicase and Assembly of the Replication Transcription Complex | 1 | 48.8× | 0.103 | CHMP4C |
| Translation of Replicase and Assembly of the Replication Transcription Complex | 1 | 45.3× | 0.103 | CHMP4C |
| Glucuronidation | 1 | 42.3× | 0.103 | UGT2A2 |
| Synthesis of bile acids and bile salts via 27-hydroxycholesterol | 1 | 42.3× | 0.103 | AKR1C3 |
| Synthesis of Prostaglandins (PG) and Thromboxanes (TX) | 1 | 42.3× | 0.103 | AKR1C3 |
| Regulation of gene expression in late stage (branching morphogenesis) pancreatic bud precursor cells | 1 | 39.6× | 0.103 | HNF1B |
| Negative regulation of TCF-dependent signaling by WNT ligand antagonists | 1 | 39.6× | 0.103 | WNT4 |
| Transcriptional regulation of testis differentiation | 1 | 39.6× | 0.103 | WNT4 |
| TGF-beta receptor signaling in EMT (epithelial to mesenchymal transition) | 1 | 37.3× | 0.103 | TGFBR1 |
| Developmental Lineage of Mammary Gland Alveolar Cells | 1 | 35.2× | 0.103 | ANKRD30A |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 26 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|
| kidney development | 4 | 21.6× | 0.011 | HNF1B, TGFBR1, WNT4, TIPARP |
| RNA-templated transcription | 1 | 648.1× | 0.018 | TERT |
| response to symbiont | 1 | 648.1× | 0.018 | UGT2A2 |
| DNA strand elongation | 1 | 648.1× | 0.018 | TERT |
| female sex determination | 1 | 648.1× | 0.018 | WNT4 |
| regulation of pronephros size | 1 | 648.1× | 0.018 | HNF1B |
| pronephric nephron tubule development | 1 | 648.1× | 0.018 | HNF1B |
| extracellular structure organization | 1 | 648.1× | 0.018 | TGFBR1 |
| macromolecule metabolic process | 1 | 648.1× | 0.018 | AKR1C3 |
| response to ammonium ion | 1 | 648.1× | 0.018 | ADSS2 |
| ureteric bud elongation | 1 | 648.1× | 0.018 | HNF1B |
| obsolete negative regulation of mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis | 1 | 648.1× | 0.018 | HNF1B |
| negative regulation of testicular blood vessel morphogenesis | 1 | 648.1× | 0.018 | WNT4 |
| cellular response to prostaglandin stimulus | 1 | 648.1× | 0.018 | AKR1C3 |
| cellular response to corticosteroid stimulus | 1 | 648.1× | 0.018 | AKR1C3 |
| metanephric nephron morphogenesis | 1 | 648.1× | 0.018 | WNT4 |
| siRNA transcription | 1 | 648.1× | 0.018 | TERT |
| mesenchymal cell apoptotic process involved in metanephros development | 1 | 648.1× | 0.018 | HNF1B |
| positive regulation of transdifferentiation | 1 | 648.1× | 0.018 | TERT |
| negative regulation of male gonad development | 1 | 648.1× | 0.018 | WNT4 |
| positive regulation of cortisol biosynthetic process | 1 | 648.1× | 0.018 | WNT4 |
| negative regulation of androgen biosynthetic process | 1 | 648.1× | 0.018 | WNT4 |
| obsolete regulation of Rho-dependent protein serine/threonine kinase activity | 1 | 648.1× | 0.018 | SYNPO2 |
| late endosome to lysosome transport | 2 | 76.2× | 0.018 | PLEKHM1, CHMP4C |
| female gonad development | 2 | 61.7× | 0.018 | WNT4, TIPARP |
| skeletal system morphogenesis | 2 | 38.1× | 0.018 | TGFBR1, TIPARP |
| roof of mouth development | 3 | 28.6× | 0.018 | TGFBR1, TIPARP, BNC2 |
| male gonad development | 3 | 18.0× | 0.018 | TGFBR1, WNT4, AKR1C3 |
| negative regulation of cell migration | 3 | 12.9× | 0.018 | TGFBR1, WNT4, SRGAP1 |
| positive regulation of Wnt signaling pathway | 2 | 29.5× | 0.023 | TERT, RSPO1 |
Therapeutics
Drug target analysis
Approved (phase 4): 4 · Phase ≥3: 4 · Phased (≥1): 5 · Undrugged: 23
Druggability breadth: 8 of 28 evidence-associated genes (29%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Genes with an approved drug
The molecule shown is one approved compound that hits the gene — not necessarily a drug of choice or one indicated for this disease.
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|
| TGFBR1 | 28 | 4 |
| AKR1C3 | 22 | 4 |
| TERT | 10 | 4 |
| TIPARP | 4 | 4 |
| ABCB4 | 1 | 2 |
| SEMA3E | 0 | 0 |
| SURF6 | 0 | 0 |
| HNF1B | 0 | 0 |
| WNT4 | 0 | 0 |
| ZBTB18 | 0 | 0 |
Drugs targeting cohort genes (top 30)
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 5.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|
| TGFBR1 | 541 | Binding:516, Functional:13, ADMET:12 |
| TERT | 391 | Binding:389, Functional:2 |
| AKR1C3 | 204 | Binding:197, ADMET:7 |
| TIPARP | 48 | Binding:48 |
| UGT2A2 | 35 | ADMET:35 |
| ABO | 6 | Binding:6 |
| ABCB4 | 4 | ADMET:3, Binding:1 |
| ADSS2 | 2 | Binding:2 |
Cohort enzymes (BRENDA EC)
| Symbol | EC numbers | Names |
|---|
| TGFBR1 | 2.7.10.2, 2.7.11.30 | non-specific protein-tyrosine kinase, receptor protein serine/threonine kinase |
| TIPARP | 2.4.2.30 | NAD+ ADP-ribosyltransferase |
| AKR1C3 | 1.1.1.188, 1.1.1.21, 1.1.1.213, 1.1.1.239, 1.1.1.357, 1.1.1.51, 1.1.1.62, 1.1.1.64, 1.3.1.20 | prostaglandin-F synthase, aldose reductase, 3alpha-hydroxysteroid 3-dehydrogenase (Re-specific), 3alpha(17beta)-hydroxysteroid dehydrogenase (NAD+), 3alpha-hydroxysteroid 3-dehydrogenase, 3(or 17)beta-hydroxysteroid dehydrogenase, 17beta-estradiol 17-dehydrogenase, testosterone 17beta-dehydrogenase (NADP+), trans-1,2-dihydrobenzene-1,2-diol dehydrogenase |
| GPX6 | 1.11.1.9 | glutathione peroxidase |
| ABO | 2.4.1.37, 2.4.1.40, 2.4.1.88 | fucosylgalactoside 3-alpha-galactosyltransferase, glycoprotein-fucosylgalactoside alpha-N-acetylgalactosaminyltransferase, globoside alpha-N-acetylgalactosaminyltransferase |
Cohort genes with high screening signal
≥100 ChEMBL assays — a studied-ness signal; see Therapeutics for approved-drug status.
| Symbol | ChEMBL assays |
|---|
| TERT | 391 |
| TGFBR1 | 541 |
| AKR1C3 | 204 |
Pharmacogenomics
Cohort genes with a PharmGKB record: 27; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Drug repurposing candidates
29 approved/phased drugs hit cohort targets but don’t yet appear in disease-level clinical trials. Target-inhibition rationale is strongest for cancer driver genes; a bioactivity hit is a screening signal, not a treatment claim.
| Compound | Max phase | Cohort target (bioactivity) |
|---|
| BERBERINE | 4 | AKR1C3, TERT |
| DOXORUBICIN | 4 | TERT |
| MOMELOTINIB | 4 | TGFBR1 |
| DABRAFENIB | 4 | TGFBR1 |
| NINTEDANIB | 4 | TGFBR1 |
| DASATINIB | 4 | TGFBR1 |
| CRIZOTINIB | 4 | TGFBR1 |
| DICLOFENAC SODIUM | 4 | AKR1C3 |
| DIAZEPAM | 4 | AKR1C3 |
| BIMATOPROST | 4 | AKR1C3 |
| GLIMEPIRIDE | 4 | AKR1C3 |
| NAPROXEN | 4 | AKR1C3 |
| DEXIBUPROFEN | 4 | AKR1C3 |
| GLICLAZIDE | 4 | AKR1C3 |
| MECLOFENAMIC ACID | 4 | AKR1C3 |
| IBUPROFEN | 4 | AKR1C3 |
| FLURBIPROFEN | 4 | AKR1C3 |
| INDOMETHACIN | 4 | AKR1C3 |
| MEFENAMIC ACID | 4 | AKR1C3 |
| MEDROXYPROGESTERONE ACETATE | 4 | AKR1C3 |
| RESVERATROL | 3 | TERT |
| EPIGALOCATECHIN GALLATE | 3 | TERT |
| PERIFOSINE | 3 | TERT |
| SARACATINIB | 3 | TGFBR1 |
| CANERTINIB | 3 | TGFBR1 |
| TESEVATINIB | 3 | TGFBR1 |
| CEDIRANIB | 3 | TGFBR1 |
| LESTAURTINIB | 3 | TGFBR1 |
| PAMIPARIB | 3 | TIPARP |
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|
| A | Approved (phase 4 drug) | 4 | TERT, TGFBR1, TIPARP, AKR1C3 |
| B | Phased (≥1) drug, not yet approved | 1 | ABCB4 |
| C | Druggable family + PDB, no drug | 1 | ABO |
| D | Druggable family + AlphaFold only, no drug | 2 | SEMA3E, GPX6 |
| E | Difficult family or no structure, no drug | 20 | SURF6, HNF1B, WNT4, ZBTB18, SKAP1, MLLT10, ANKRD30A, SRGAP1, NAMPTP1, SYNPO2 (+10 more) |
Undrugged target profiles
23 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
| Symbol | ChEMBL assays | Drugged partners (top 3) |
|---|
| SEMA3E | 0 | — |
| SURF6 | 0 | — |
| HNF1B | 0 | — |
| WNT4 | 0 | — |
| ZBTB18 | 0 | — |
| SKAP1 | 0 | — |
| MLLT10 | 0 | — |
| ANKRD30A | 0 | — |
| SRGAP1 | 0 | — |
| NAMPTP1 | 0 | — |
| SYNPO2 | 0 | — |
| RSPO1 | 0 | — |
| COL15A1 | 0 | — |
| BABAM1 | 0 | — |
| UGT2A2 | 35 | — |
| PLEKHM1 | 0 | — |
| ADSS2 | 2 | — |
| WWC1 | 0 | — |
| CHMP4C | 0 | — |
| BNC2 | 0 | — |
| GPX6 | 0 | — |
| HOXD1 | 0 | — |
| ABO | 6 | — |
Clinical trials & evidence
Clinical trials
Clinical trials: 130.
Phase distribution (across all retrieved trials)
| Phase | Trials |
|---|
| PHASE2 | 51 |
| PHASE1 | 39 |
| Not specified | 25 |
| PHASE1/PHASE2 | 8 |
| PHASE3 | 4 |
| EARLY_PHASE1 | 2 |
| PHASE4 | 1 |
Top trials by phase / activity
| NCT | Phase | Status | Title |
|---|
| NCT03349463 | PHASE4 | UNKNOWN | Evaluation of Fluciclovine Uptake in Patients With Cervical, Ovarian Epithelial or Endometrial Cancers. |
| NCT01376752 | PHASE3 | ACTIVE_NOT_RECRUITING | Hyperthermic Intra-Peritoneal Chemotherapy (HIPEC) in Relapse Ovarian Cancer Treatment |
| NCT00041080 | PHASE3 | COMPLETED | Tamoxifen Compared With Thalidomide in Treating Women With Ovarian Epithelial Cancer, Fallopian Tube Cancer, or Primary Peritoneal Cancer |
| NCT01611766 | PHASE3 | UNKNOWN | Surgery or Chemotherapy in Recurrent Ovarian Cancer (SOC 1 Trial)? |
| NCT03220932 | PHASE3 | UNKNOWN | Cytoreductive Surgery and HIPEC in First or Secondary Platinum-resistant Recurrent Ovarian Epithelial Cancer |
| NCT04055649 | PHASE2 | RECRUITING | ONC201 Plus Weekly Paclitaxel in Patients With Platinum Refractory or Resistant Ovarian Cancer |
| NCT05335993 | PHASE2 | ACTIVE_NOT_RECRUITING | A Clinical Study Evaluating a Combination of Oregovomab and Niraparib in Adult Women With Platinum Sensitive Recurrent Ovarian Cancer. |
| NCT06638931 | PHASE2 | RECRUITING | Agnostic Therapy in Rare Solid Tumors |
| NCT07341100 | PHASE2 | RECRUITING | Study to Evaluate the Preliminary Efficacy of SKB264 and the Effect of Clarithromycin on the PK of SKB264 in OC |
| NCT00006942 | PHASE2 | COMPLETED | Bryostatin 1 and Cisplatin in Treating Patients With Advanced Recurrent or Residual Ovarian Epithelial, Fallopian Tube, or Primary Peritoneal Cancer |
| NCT00016289 | PHASE2 | COMPLETED | Interleukin-12 in Treating Patients With Ovarian Epithelial Cancer or Primary Peritoneal Cancer |
| NCT00022659 | PHASE2 | COMPLETED | Bevacizumab in Treating Patients With Persistent or Recurrent Ovarian Epithelial Cancer or Primary Peritoneal Cancer |
| NCT00023712 | PHASE2 | COMPLETED | Bortezomib in Treating Patients With Persistent or Recurrent Ovarian Epithelial Cancer or Primary Peritoneal Cancer |
| NCT00025155 | PHASE2 | COMPLETED | Ixabepilone in Treating Patients With Ovarian Epithelial or Primary Peritoneal Cancer That Has Not Responded to Previous Chemotherapy |
| NCT00026091 | PHASE2 | COMPLETED | Fenretinide in Treating Patients With Recurrent or Metastatic Ovarian Epithelial or Primary Peritoneal Cancer |
| NCT00036751 | PHASE2 | COMPLETED | Imatinib Mesylate in Treating Patients With Stage III or Stage IV Ovarian Epithelial or Primary Peritoneal Cancer |
| NCT00041041 | PHASE2 | COMPLETED | Imatinib Mesylate in Treating Patients With Persistent or Recurrent Ovarian Epithelial or Primary Peritoneal Cancer |
| NCT00053365 | PHASE2 | COMPLETED | Irofulven in Treating Patients With Recurrent or Persistent Ovarian Epithelial or Primary Peritoneal Cancer |
| NCT00059787 | PHASE2 | COMPLETED | Erlotinib Plus Carboplatin and Paclitaxel in Ovarian Carcinoma |
| NCT00063895 | PHASE1/PHASE2 | COMPLETED | Erlotinib in Treating Patients With Advanced Non-Small Cell Lung Cancer, Ovarian Cancer, or Squamous Cell Carcinoma of the Head and Neck |
| NCT00081276 | PHASE2 | COMPLETED | 3-AP and Cisplatin in Treating Patients With Recurrent or Persistent Platinum-Resistant Ovarian Epithelial or Primary Peritoneal Cancer |
| NCT00083122 | PHASE2 | COMPLETED | Cisplatin and Flavopiridol in Treating Patients With Advanced Ovarian Epithelial Cancer or Primary Peritoneal Cancer |
| NCT00091195 | PHASE2 | TERMINATED | Depsipeptide (Romidepsin) in Treating Patients With Recurrent Ovarian Epithelial or Peritoneal Cavity Cancer |
| NCT00093496 | PHASE2 | COMPLETED | Gemcitabine Hydrochloride and Tanespimycin in Treating Patients With Recurrent Advanced Ovarian Epithelial or Peritoneal Cavity Cancer |
| NCT00096395 | PHASE2 | COMPLETED | Sorafenib Tosylate and Gemcitabine Hydrochloride in Treating Patients With Recurrent Epithelial Ovarian Cancer |
| NCT00107445 | PHASE2 | COMPLETED | EF5 in Finding Oxygen in Tumor Cells of Patients Who Are Undergoing Surgery or Biopsy for Cervical, Endometrial, or Ovarian Epithelial Cancer |
| NCT00113373 | PHASE2 | COMPLETED | Lapatinib in Treating Patients With Persistent or Recurrent Ovarian Epithelial or Peritoneal Cancer |
| NCT00126542 | PHASE2 | COMPLETED | Bevacizumab and Erlotinib in Treating Patients With Recurrent or Metastatic Ovarian Epithelial, Fallopian Tube, or Primary Peritoneal Cavity Cancer |
| NCT00132067 | PHASE2 | COMPLETED | Vorinostat in Treating Patients With Recurrent or Persistent Ovarian Epithelial or Primary Peritoneal Cavity Cancer |
| NCT00182767 | PHASE1/PHASE2 | COMPLETED | Ixabepilone and Liposomal Doxorubicin in Advanced Ovarian Cancer |
| NCT00275028 | PHASE2 | COMPLETED | AZD2171 in Treating Patients With Recurrent Ovarian, Peritoneal, or Fallopian Tube Cancer |
| NCT00278343 | PHASE2 | COMPLETED | Cediranib Maleate in Treating Patients With Persistent, Recurrent, or Refractory Advanced Ovarian Epithelial, Peritoneal Cavity, or Fallopian Tube Cancer |
| NCT00313612 | PHASE2 | TERMINATED | Oxaliplatin and Topotecan in Advance Ovarian Cancer |
| NCT00316407 | PHASE1/PHASE2 | COMPLETED | Lapatinib/Carboplatin/Paclitaxel in Previously Treated Ovarian or Breast Cancer Patients |
| NCT00334893 | PHASE2 | COMPLETED | Eribulin Mesylate in Treating Patients With Recurrent Ovarian Epithelial, Primary Peritoneal Cavity, or Fallopian Tube Cancer |
| NCT00388037 | PHASE2 | COMPLETED | Sunitinib Malate in Treating Patients With Recurrent Ovarian Epithelial, Fallopian Tube, or Primary Peritoneal Cancer |
| NCT00390234 | PHASE2 | COMPLETED | Ziv-aflibercept in Treating Patients With Locally Advanced, Unresectable, or Metastatic Gynecologic Soft Tissue Sarcoma |
| NCT00429793 | PHASE2 | COMPLETED | Temsirolimus in Treating Patients With Refractory or Recurrent Ovarian Epithelial, Fallopian Tube, or Primary Peritoneal Cancer |
| NCT00436501 | PHASE1/PHASE2 | COMPLETED | VEGF Trap and Docetaxel in Treating Patients With Persistent or Recurrent Ovarian Epithelial Cancer, Primary Peritoneal Cancer, or Fallopian Tube Cancer |
| NCT00466960 | PHASE2 | COMPLETED | Sargramostim and Paclitaxel Albumin-Stabilized Nanoparticle Formulation in Treating Patients With Advanced Ovarian Cancer, Fallopian Tube Cancer, or Primary Peritoneal Cancer That Did Not Respond to Previous Chemotherapy |
Drugs tested across these trials (top 30)
- Cohort genes: TERT, TGFBR1, SEMA3E, SURF6, HNF1B, WNT4, ZBTB18, SKAP1, MLLT10, ANKRD30A, SRGAP1, SYNPO2, RSPO1, COL15A1, TIPARP, BABAM1, PLEKHM1, ADSS2, WWC1, CHMP4C, BNC2, AKR1C3, ABCB4, GPX6, HOXD1, ABO
- Drugs: Lapatinib, Erlotinib, Sorafenib, Denileukin Diftitox, Imatinib, Ixabepilone, Metformin, Ondansetron, Trabectedin, Auranofin, Avelumab, Belinostat, Cefepime, Deferasirox, Eribulin, FLUCICLOVINE F18, Lithium Carbonate, Olaparib, Propranolol, Romidepsin, Sunitinib Malate, Tamoxifen, Temsirolimus, Thalidomide, Topotecan, Vorinostat, Alvocidib, Cediranib, Triapine, Veliparib