Metabolic dysfunction-associated steatohepatitis
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Also known as MASHNASHNASH - nonalcoholic steatohepatitisnon-alcoholic steatohepatitisnonalcoholic steatohepatitis
Summary
Metabolic dysfunction-associated steatohepatitis (MONDO:0007027) is a disease with 10 cohort genes (13 GWAS associations across 3 studies) and 562 clinical trials. Top therapeutic interventions include pioglitazone, vitamin e, and obeticholic acid.
At a glance
- Cohort genes: 10
- GWAS associations: 13
- Clinical trials: 562
Clinical features
No curated clinical features (Orphanet) for this disease.
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | metabolic dysfunction-associated steatohepatitis |
| Mondo ID | MONDO:0007027 |
| EFO | EFO:1001249 |
| DOID | DOID:0080547 |
| ICD-10-CM | K75.81 |
| ICD-11 | 1884917970 |
| NCIT | C84445 |
| UMLS | C3241937 |
| MedGen | 469032 |
| MedDRA | 10053219 |
| Is cancer (heuristic) | no |
Also known as: MASH · NASH · NASH - nonalcoholic steatohepatitis · non-alcoholic steatohepatitis · nonalcoholic steatohepatitis
Data availability: 13 GWAS associations (3 studies).
Disease family
Classification path: disease › human disease › disease by body system or component › digestive system disorder › hepatobiliary disorder › liver disorder › hepatitis › metabolic dysfunction-associated steatohepatitis
Related subtypes (8): alcoholic hepatitis, drug-induced hepatitis, granulomatous hepatitis, hepatic tuberculosis, viral hepatitis, autoimmune hepatitis, fulminant viral hepatitis, idiopathic peliosis hepatis
Genetics & variants
GWAS landscape
13 GWAS associations across 3 studies. Top hits map to 10 distinct genes (as reported by GWAS).
Top associations by p-value
| rsID | p-value | Gene | Risk allele | Odds ratio |
|---|---|---|---|---|
| rs738409 | 3e-44 | PNPLA3 | ? | 2.05 |
| rs12077210 | 4e-09 | LEPROT, LEPR | ? | 1.67 |
| rs2896019 | 2e-08 | PNPLA3 | G | 3.37 |
| rs80084600 | 7e-08 | LINC01036 | ? | 1.98 |
| rs8107974 | 1e-07 | SUGP1 | ? | 1.61 |
| rs13118664 | 2e-07 | HSD17B13 | ? | 1.4 |
| rs58542926 | 2e-07 | TM6SF2 | ? | 1.61 |
| rs9992651 | 3e-07 | HSD17B13 | ? | 1.39 |
| rs1260326 | 4e-07 | GCKR | ? | 1.3 |
| rs17007417 | 5e-07 | DYSF - RPS20P10 | T | 2.74 |
| rs2143571 | 9e-07 | SAMM50 | A | 2.7 |
| rs6571631 | 7e-06 | NDRG2 | ? | |
| rs6660749 | 8e-06 | C1orf94 - MIR552 | ? |
Top studies (by case count)
| Study | Lead author | Year | Cases | Controls | Title |
|---|---|---|---|---|---|
| GCST010861 | Anstee QM | 2020 | 836 | 17,781 | Genome-wide association study of non-alcoholic fatty liver and steatohepatitis in a histologically-characterised cohort. |
| GCST005309 | Kawaguchi T | 2018 | 58 | 7,672 | Risk estimation model for nonalcoholic fatty liver disease in the Japanese using multiple genetic markers. |
| GCST004943 | Wattacheril J | 2017 | 46 | 0 | Genome-Wide Associations Related to Hepatic Histology in Nonalcoholic Fatty Liver Disease in Hispanic Boys. |
Variant details and genetic-evidence tiers
Tier distribution (top 50 variants)
| Tier | Variants |
|---|---|
| Tier 1: coding | 3 |
| Tier 2: splice/UTR | 0 |
| Tier 3: regulatory | 1 |
| Tier 4: intronic/intergenic | 9 |
MAF distribution
| Bucket | Variants |
|---|---|
| common (>=0.05) | 13 |
| low_freq (0.01-0.05) | 0 |
| rare (<0.01) | 0 |
| unknown | 0 |
Functional consequences
| Consequence | Count |
|---|---|
| intron_variant | 8 |
| missense_variant | 2 |
| stop_gained | 1 |
| regulatory_region_variant | 1 |
| intergenic_variant | 1 |
Top variants
| rsID | Chr | Pos | Alleles | MAF | Consequence | Gene | p-value | Tier |
|---|---|---|---|---|---|---|---|---|
| rs738409 | 22 | 43928847 | C>A,G,T | 0.05 | missense_variant | PNPLA3 | 3e-44 | Tier 1: coding |
| rs12077210 | 1 | 65428477 | C>T | 0.05 | intron_variant | LEPROT, LEPR | 4e-09 | Tier 4: intronic/intergenic |
| rs2896019 | 22 | 43937814 | T>G | 0.46 | intron_variant | PNPLA3 | 2e-08 | Tier 4: intronic/intergenic |
| rs80084600 | 1 | 187379678 | A>C,G | 0.05 | intron_variant | LINC01036 | 7e-08 | Tier 4: intronic/intergenic |
| rs8107974 | 19 | 19277691 | A>C,G,T | 0.05 | intron_variant | SUGP1 | 1e-07 | Tier 4: intronic/intergenic |
| rs13118664 | 4 | 87318457 | A>G,T | 0.05 | intron_variant | HSD17B13 | 2e-07 | Tier 4: intronic/intergenic |
| rs58542926 | 19 | 19268740 | C>A,T | 0.05 | stop_gained | TM6SF2 | 2e-07 | Tier 1: coding |
| rs9992651 | 4 | 87311358 | G>A | 0.05 | intron_variant | HSD17B13 | 3e-07 | Tier 4: intronic/intergenic |
| rs1260326 | 2 | 27508073 | T>A,C,G | 0.05 | missense_variant | GCKR | 4e-07 | Tier 1: coding |
| rs17007417 | 2 | 71808541 | T>A,C,G | 0.17 | regulatory_region_variant | DYSF - RPS20P10 | 5e-07 | Tier 3: regulatory |
| rs2143571 | 22 | 43995806 | G>A,C | 0.43 | intron_variant | SAMM50 | 9e-07 | Tier 4: intronic/intergenic |
| rs6571631 | 14 | 21063674 | C>A,T | 0.05 | intron_variant | NDRG2 | 7e-06 | Tier 4: intronic/intergenic |
| rs6660749 | 1 | 34349852 | G>A,T | 0.05 | intergenic_variant | C1orf94 - MIR552 | 8e-06 | Tier 4: intronic/intergenic |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 0 · Orphanet: 5 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|---|---|
| DYSF | Orphanet:178400 | Distal myopathy with anterior tibial onset |
| DYSF | Orphanet:199329 | Congenital myopathy, Paradas type |
| DYSF | Orphanet:268 | Dysferlin-related limb-girdle muscular dystrophy R2 |
| DYSF | Orphanet:45448 | Miyoshi myopathy |
| LEPR | Orphanet:179494 | Obesity due to leptin receptor gene deficiency |
Cohort genes → proteins
10 cohort genes, 10 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|---|
| gwas_only | 10 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|---|---|---|---|---|
| TM6SF2 | HGNC:11861 | ENSG00000213996 | Q9BZW4 | Transmembrane 6 superfamily member 2 | gwas |
| PNPLA3 | HGNC:18590 | ENSG00000100344 | Q9NST1 | 1-acylglycerol-3-phosphate O-acyltransferase PNPLA3 | gwas |
| SUGP1 | HGNC:18643 | ENSG00000105705 | Q8IWZ8 | SURP and G-patch domain-containing protein 1 | gwas |
| HSD17B13 | HGNC:18685 | ENSG00000170509 | Q7Z5P4 | 17-beta-hydroxysteroid dehydrogenase 13 | gwas |
| SAMM50 | HGNC:24276 | ENSG00000100347 | Q9Y512 | Sorting and assembly machinery component 50 homolog | gwas |
| ARHGEF40 | HGNC:25516 | ENSG00000165801 | Q8TER5 | Rho guanine nucleotide exchange factor 40 | gwas |
| C1orf94 | HGNC:28250 | ENSG00000142698 | Q6P1W5 | Uncharacterized protein C1orf94 | gwas |
| DYSF | HGNC:3097 | ENSG00000135636 | O75923 | Dysferlin | gwas |
| LEPR | HGNC:6554 | ENSG00000116678 | P48357 | Leptin receptor | gwas |
| MAP4K5 | HGNC:6867 | ENSG00000012983 | Q9Y4K4 | Mitogen-activated protein kinase kinase kinase kinase 5 | gwas |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|---|---|
| TM6SF2 | Transmembrane 6 superfamily member 2 | Regulator of liver fat metabolism influencing triglyceride secretion and hepatic lipid droplet content. |
| PNPLA3 | 1-acylglycerol-3-phosphate O-acyltransferase PNPLA3 | Specifically catalyzes coenzyme A (CoA)-dependent acylation of 1-acyl-sn-glycerol 3-phosphate (2-lysophosphatidic acid/LPA) to generate phosphatidic acid (PA), an important metabolic intermediate and precursor for both triglycerides and gl… |
| SUGP1 | SURP and G-patch domain-containing protein 1 | Plays a role in pre-mRNA splicing. |
| HSD17B13 | 17-beta-hydroxysteroid dehydrogenase 13 | Plays a pivotal role in hepatic lipid metabolism. |
| SAMM50 | Sorting and assembly machinery component 50 homolog | Plays a crucial role in the maintenance of the structure of mitochondrial cristae and the proper assembly of the mitochondrial respiratory chain complexes. |
| ARHGEF40 | Rho guanine nucleotide exchange factor 40 | Acts as a guanine nucleotide exchange factor (GEF) for RHOA and RHOC. |
| DYSF | Dysferlin | Key calcium ion sensor involved in the Ca(2+)-triggered synaptic vesicle-plasma membrane fusion. |
| LEPR | Leptin receptor | Receptor for hormone LEP/leptin. |
| MAP4K5 | Mitogen-activated protein kinase kinase kinase kinase 5 | May play a role in the response to environmental stress. |
Protein-family classification
Druggable: 2 · Difficult: 1 · Unknown: 7 · Druggable fraction: 0.2
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|---|---|---|
| Antibody/Immunoglobulin | 1 | 2.9× | 0.410 |
| Kinase | 1 | 2.8× | 0.410 |
| Other/Unknown | 7 | 1.2× | 0.410 |
| Scaffold/PPI | 1 | 1.7× | 0.449 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|---|---|---|---|
| TM6SF2 | Other/Unknown | no | EXPERA, TM6SF1-like, TM_Tm6sf1/2 | |
| PNPLA3 | Other/Unknown | no | PNPLA_dom, Acyl_Trfase/lysoPLipase, PLPL | |
| SUGP1 | Other/Unknown | no | Surp, G_patch_dom, SWAP/Surp_sf | |
| HSD17B13 | Other/Unknown | no | SDR_fam, NAD(P)-bd_dom_sf | |
| SAMM50 | Other/Unknown | no | Bac_surfAg_D15, POTRA, D15-like | |
| ARHGEF40 | Scaffold/PPI | no | DH_dom, PH_domain, PH-like_dom_sf | |
| C1orf94 | Other/Unknown | no | DUF4688 | |
| DYSF | Other/Unknown | no | C2_dom, Peroxin/Ferlin, Ferlin_A-domain | |
| LEPR | Antibody/Immunoglobulin | yes | Hematopoietin_rcpt_Gp130_CS, Hempt_rcpt_S_F1_CS, FN3_dom | |
| MAP4K5 | Kinase | yes | Prot_kinase_dom, CNH_dom, Kinase-like_dom_sf |
Expression context
Cohort genes with no expression data: 0.
8 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 0 |
| broad (>20) | 10 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|---|
| buccal mucosa cell | 2 |
| right lobe of liver | 2 |
| skeletal muscle tissue of rectus abdominis | 2 |
| duodenum | 1 |
| ileal mucosa | 1 |
| jejunal mucosa | 1 |
| pigmented layer of retina | 1 |
| lower esophagus mucosa | 1 |
| right hemisphere of cerebellum | 1 |
| right testis | 1 |
| liver | 1 |
| olfactory segment of nasal mucosa | 1 |
| endothelial cell | 1 |
| vastus lateralis | 1 |
| right adrenal gland | 1 |
| tendon of biceps brachii | 1 |
| male germ line stem cell (sensu Vertebrata) in testis | 1 |
| nasal cavity epithelium | 1 |
| sperm | 1 |
| blood | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|---|---|---|---|
| TM6SF2 | 151 | broad | marker | ileal mucosa, jejunal mucosa, duodenum |
| PNPLA3 | 178 | ubiquitous | marker | pigmented layer of retina, buccal mucosa cell, right lobe of liver |
| SUGP1 | 262 | ubiquitous | marker | lower esophagus mucosa, right testis, right hemisphere of cerebellum |
| HSD17B13 | 127 | tissue_specific | yes | liver, right lobe of liver, olfactory segment of nasal mucosa |
| SAMM50 | 292 | ubiquitous | marker | endothelial cell, vastus lateralis, skeletal muscle tissue of rectus abdominis |
| ARHGEF40 | 281 | ubiquitous | marker | buccal mucosa cell, tendon of biceps brachii, right adrenal gland |
| C1orf94 | 49 | tissue_specific | yes | sperm, male germ line stem cell (sensu Vertebrata) in testis, nasal cavity epithelium |
| DYSF | 257 | ubiquitous | marker | blood, hindlimb stylopod muscle, skeletal muscle tissue of rectus abdominis |
| LEPR | 272 | broad | marker | trabecular bone tissue, choroid plexus epithelium, trigeminal ganglion |
| MAP4K5 | 296 | ubiquitous | marker | corpus callosum, sural nerve, calcaneal tendon |
Protein interactions among cohort
Intra-cohort edges: 7.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|---|
| HSD17B13 | 3,393 |
| SAMM50 | 2,977 |
| LEPR | 2,243 |
| SUGP1 | 2,164 |
| DYSF | 1,776 |
| PNPLA3 | 1,441 |
| MAP4K5 | 1,055 |
| TM6SF2 | 879 |
| C1orf94 | 762 |
| ARHGEF40 | 711 |
Intra-cohort edges
| A | B | Sources |
|---|---|---|
| ARHGEF40 | C1orf94 | string_interaction |
| HSD17B13 | PNPLA3 | string_interaction |
| HSD17B13 | SAMM50 | string_interaction |
| HSD17B13 | TM6SF2 | string_interaction |
| PNPLA3 | SAMM50 | string_interaction |
| PNPLA3 | TM6SF2 | string_interaction |
| SUGP1 | TM6SF2 | string_interaction |
Structural data
PDB: 5 · AlphaFold-only: 5 · No structure: 0
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|---|---|
| DYSF | O75923 | 11 |
| LEPR | P48357 | 9 |
| SUGP1 | Q8IWZ8 | 3 |
| SAMM50 | Q9Y512 | 2 |
| HSD17B13 | Q7Z5P4 | 1 |
AlphaFold-only cohort genes (top 30 by pLDDT)
| Symbol | UniProt | pLDDT |
|---|---|---|
| TM6SF2 | Q9BZW4 | 91.03 |
| MAP4K5 | Q9Y4K4 | 74.15 |
| PNPLA3 | Q9NST1 | 71.70 |
| ARHGEF40 | Q8TER5 | 64.28 |
| C1orf94 | Q6P1W5 | 43.05 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 29. Enrichment computed across 10 evidence-associated genes (7 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 7 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| Lipid particle organization | 1 | 271.9× | 0.049 | HSD17B13 |
| Acyl chain remodeling of DAG and TAG | 1 | 233.1× | 0.049 | PNPLA3 |
| Signaling by Leptin | 1 | 148.3× | 0.049 | LEPR |
| RHO GTPase cycle | 2 | 17.2× | 0.049 | SAMM50, ARHGEF40 |
| Signaling by Rho GTPases | 2 | 9.8× | 0.082 | SAMM50, ARHGEF40 |
| Signaling by Rho GTPases, Miro GTPases and RHOBTB3 | 2 | 9.6× | 0.082 | SAMM50, ARHGEF40 |
| Cristae formation | 1 | 49.4× | 0.083 | SAMM50 |
| Smooth Muscle Contraction | 1 | 37.9× | 0.085 | DYSF |
| Cell death signalling via NRAGE, NRIF and NADE | 1 | 31.4× | 0.085 | ARHGEF40 |
| Protein localization | 1 | 27.2× | 0.085 | SAMM50 |
| p75 NTR receptor-mediated signalling | 1 | 26.7× | 0.085 | ARHGEF40 |
| NRAGE signals death through JNK | 1 | 26.3× | 0.085 | ARHGEF40 |
| Mitochondrial protein import | 1 | 24.0× | 0.085 | SAMM50 |
| Mitochondrial biogenesis | 1 | 24.0× | 0.085 | SAMM50 |
| RHOC GTPase cycle | 1 | 20.9× | 0.085 | ARHGEF40 |
| Death Receptor Signaling | 1 | 19.9× | 0.085 | ARHGEF40 |
| G alpha (12/13) signalling events | 1 | 19.7× | 0.085 | ARHGEF40 |
| RAC2 GTPase cycle | 1 | 18.1× | 0.087 | SAMM50 |
| mRNA Splicing | 1 | 15.7× | 0.095 | SUGP1 |
| mRNA Polyadenylation | 1 | 12.6× | 0.112 | SUGP1 |
| Processing of Capped Intron-Containing Pre-mRNA | 1 | 11.7× | 0.113 | SUGP1 |
| RHOA GTPase cycle | 1 | 10.7× | 0.119 | ARHGEF40 |
| Organelle biogenesis and maintenance | 1 | 9.4× | 0.128 | SAMM50 |
| mRNA Splicing - Major Pathway | 1 | 7.8× | 0.147 | SUGP1 |
| Dengue Virus-Host Interactions | 1 | 6.5× | 0.162 | SUGP1 |
| GPCR downstream signalling | 1 | 6.2× | 0.162 | ARHGEF40 |
| Signal Transduction | 2 | 2.9× | 0.162 | SAMM50, ARHGEF40 |
| Metabolism of RNA | 1 | 6.0× | 0.162 | SUGP1 |
| Signaling by GPCR | 1 | 5.7× | 0.162 | ARHGEF40 |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 9 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| monocyte activation involved in immune response | 1 | 1872.4× | 0.010 | DYSF |
| triglyceride acyl-chain remodeling | 1 | 1872.4× | 0.010 | PNPLA3 |
| multicellular organism development | 1 | 936.2× | 0.010 | LEPR |
| regulation of transport | 1 | 936.2× | 0.010 | LEPR |
| cellular response to 3,3’,5-triiodo-L-thyronine | 1 | 936.2× | 0.010 | PNPLA3 |
| lipid homeostasis | 2 | 74.9× | 0.010 | TM6SF2, PNPLA3 |
| sexual reproduction | 1 | 624.1× | 0.013 | LEPR |
| acylglycerol acyl-chain remodeling | 1 | 468.1× | 0.015 | PNPLA3 |
| response to sucrose | 1 | 374.5× | 0.015 | PNPLA3 |
| glycerophospholipid metabolic process | 1 | 312.1× | 0.015 | PNPLA3 |
| regulation of bone remodeling | 1 | 312.1× | 0.015 | LEPR |
| leptin-mediated signaling pathway | 1 | 267.5× | 0.015 | LEPR |
| response to leptin | 1 | 267.5× | 0.015 | LEPR |
| bone growth | 1 | 267.5× | 0.015 | LEPR |
| lipid metabolic process | 2 | 20.4× | 0.015 | TM6SF2, HSD17B13 |
| regulation of feeding behavior | 1 | 208.1× | 0.016 | LEPR |
| protein insertion into mitochondrial outer membrane | 1 | 144.0× | 0.022 | SAMM50 |
| macrophage activation involved in immune response | 1 | 124.8× | 0.022 | DYSF |
| energy reserve metabolic process | 1 | 117.0× | 0.022 | LEPR |
| cristae formation | 1 | 117.0× | 0.022 | SAMM50 |
| negative regulation of phagocytosis | 1 | 110.1× | 0.022 | DYSF |
| lipid droplet organization | 1 | 104.0× | 0.022 | PNPLA3 |
| glial cell proliferation | 1 | 98.5× | 0.022 | LEPR |
| positive regulation of lipid biosynthetic process | 1 | 98.5× | 0.022 | HSD17B13 |
| inner mitochondrial membrane organization | 1 | 93.6× | 0.022 | SAMM50 |
| white fat cell differentiation | 1 | 93.6× | 0.022 | PNPLA3 |
| triglyceride catabolic process | 1 | 89.2× | 0.022 | PNPLA3 |
| negative regulation of gluconeogenesis | 1 | 89.2× | 0.022 | LEPR |
| regulation of neurotransmitter secretion | 1 | 85.1× | 0.022 | DYSF |
| triglyceride biosynthetic process | 1 | 81.4× | 0.022 | PNPLA3 |
Therapeutics
Drugs indicated for this disease
1 approved, 14 in late-stage (phase 3) trials. Disease-direct ChEMBL indications, not inferred from the associated-gene cohort below.
| Drug | Development status |
|---|---|
| Resmetirom | Approved (phase 4) |
| Cenicriviroc | Phase 3 (in late-stage trials) |
| Dapagliflozin | Phase 3 (in late-stage trials) |
| Estradiol | Phase 3 (in late-stage trials) |
| Icomidocholic Acid | Phase 3 (in late-stage trials) |
| Lanifibranor | Phase 3 (in late-stage trials) |
| Losartan | Phase 3 (in late-stage trials) |
| Metformin | Phase 3 (in late-stage trials) |
| Obeticholic Acid | Phase 3 (in late-stage trials) |
| Pioglitazone | Phase 3 (in late-stage trials) |
| Rosuvastatin | Phase 3 (in late-stage trials) |
| Selonsertib | Phase 3 (in late-stage trials) |
| Semaglutide | Phase 3 (in late-stage trials) |
| Ubidecarenone | Phase 3 (in late-stage trials) |
| Vitamin E | Phase 3 (in late-stage trials) |
Earlier-phase candidates (phase 2, investigational — efficacy not yet established): Atorvastatin, Betaine, Chiglitazar, Cilofexor, Digoxin, Elobixibat, Fenofibrate, Icosapent Ethyl, K-877, Leronlimab, Liraglutide, Lisinopril Anhydrous, MUROMONAB-CD3, Misoprostol, Nalmefene, Namodenoson, Norucholic Acid, Odevixibat, Pegargiminase, Pegozafermin, Pentoxifylline, Saroglitazar, Seladelpar, Sitagliptin, Solithromycin, Tirzepatide.
Drug target analysis
Approved (phase 4): 1 · Phase ≥3: 2 · Phased (≥1): 2 · Undrugged: 8
Druggability breadth: 4 of 10 evidence-associated genes (40%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Genes with an approved drug
The molecule shown is one approved compound that hits the gene — not necessarily a drug of choice or one indicated for this disease.
| Symbol | Example approved molecule |
|---|---|
| MAP4K5 | VEMURAFENIB |
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|---|---|
| MAP4K5 | 67 | 4 |
| HSD17B13 | 1 | 3 |
| TM6SF2 | 0 | 0 |
| PNPLA3 | 0 | 0 |
| SUGP1 | 0 | 0 |
| SAMM50 | 0 | 0 |
| ARHGEF40 | 0 | 0 |
| C1orf94 | 0 | 0 |
| DYSF | 0 | 0 |
| LEPR | 0 | 0 |
Drugs targeting cohort genes (top 30)
| Molecule | Max phase | Targets in cohort |
|---|---|---|
| VEMURAFENIB | 4 | MAP4K5 |
| LENVATINIB | 4 | MAP4K5 |
| AXITINIB | 4 | MAP4K5 |
| SORAFENIB | 4 | MAP4K5 |
| NERATINIB | 4 | MAP4K5 |
| PALBOCICLIB | 4 | MAP4K5 |
| ENTRECTINIB | 4 | MAP4K5 |
| VANDETANIB | 4 | MAP4K5 |
| BOSUTINIB | 4 | MAP4K5 |
| GILTERITINIB | 4 | MAP4K5 |
| PAZOPANIB | 4 | MAP4K5 |
| NINTEDANIB | 4 | MAP4K5 |
| SUNITINIB | 4 | MAP4K5 |
| DASATINIB | 4 | MAP4K5 |
| QUIZARTINIB | 4 | MAP4K5 |
| CRIZOTINIB | 4 | MAP4K5 |
| MIDOSTAURIN | 4 | MAP4K5 |
| GEFITINIB | 4 | MAP4K5 |
| CILOFEXOR | 3 | HSD17B13 |
| LINSITINIB | 3 | MAP4K5 |
| DACTOLISIB | 3 | MAP4K5 |
| CRENOLANIB | 3 | MAP4K5 |
| SARACATINIB | 3 | MAP4K5 |
| LINIFANIB | 3 | MAP4K5 |
| CANERTINIB | 3 | MAP4K5 |
| TESEVATINIB | 3 | MAP4K5 |
| BRIVANIB | 3 | MAP4K5 |
| BARASERTIB | 3 | MAP4K5 |
| CEDIRANIB | 3 | MAP4K5 |
| DOVITINIB | 3 | MAP4K5 |
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 0.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|---|---|
| MAP4K5 | 262 | Binding:261, Functional:1 |
| HSD17B13 | 22 | Binding:20, Functional:2 |
| LEPR | 3 | Binding:3 |
| SAMM50 | 1 | Binding:1 |
Cohort genes with high screening signal
≥100 ChEMBL assays — a studied-ness signal; see Therapeutics for approved-drug status.
| Symbol | ChEMBL assays |
|---|---|
| MAP4K5 | 262 |
Pharmacogenomics
Cohort genes with a PharmGKB record: 10; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Chemical tractability of cohort targets
30 approved/phased compounds have measured bioactivity against a cohort gene (and aren’t yet in disease-level trials). This is a research / tractability signal, NOT a therapeutic recommendation — a bioactivity row often reflects off-target or screening binding (e.g. promiscuous kinase inhibitors against a cohort kinase), implying no disease mechanism.
| Compound | Max phase | Cohort target (bioactivity) |
|---|---|---|
| VEMURAFENIB | 4 | MAP4K5 |
| LENVATINIB | 4 | MAP4K5 |
| AXITINIB | 4 | MAP4K5 |
| SORAFENIB | 4 | MAP4K5 |
| NERATINIB | 4 | MAP4K5 |
| PALBOCICLIB | 4 | MAP4K5 |
| ENTRECTINIB | 4 | MAP4K5 |
| VANDETANIB | 4 | MAP4K5 |
| BOSUTINIB | 4 | MAP4K5 |
| GILTERITINIB | 4 | MAP4K5 |
| PAZOPANIB | 4 | MAP4K5 |
| NINTEDANIB | 4 | MAP4K5 |
| SUNITINIB | 4 | MAP4K5 |
| DASATINIB | 4 | MAP4K5 |
| QUIZARTINIB | 4 | MAP4K5 |
| CRIZOTINIB | 4 | MAP4K5 |
| MIDOSTAURIN | 4 | MAP4K5 |
| GEFITINIB | 4 | MAP4K5 |
| CILOFEXOR | 3 | HSD17B13 |
| LINSITINIB | 3 | MAP4K5 |
| DACTOLISIB | 3 | MAP4K5 |
| CRENOLANIB | 3 | MAP4K5 |
| SARACATINIB | 3 | MAP4K5 |
| LINIFANIB | 3 | MAP4K5 |
| CANERTINIB | 3 | MAP4K5 |
| TESEVATINIB | 3 | MAP4K5 |
| BRIVANIB | 3 | MAP4K5 |
| BARASERTIB | 3 | MAP4K5 |
| CEDIRANIB | 3 | MAP4K5 |
| DOVITINIB | 3 | MAP4K5 |
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|---|---|---|
| A | Approved (phase 4 drug) | 1 | MAP4K5 |
| B | Phased (≥1) drug, not yet approved | 1 | HSD17B13 |
| C | Druggable family + PDB, no drug | 1 | LEPR |
| D | Druggable family + AlphaFold only, no drug | 0 | |
| E | Difficult family or no structure, no drug | 7 | TM6SF2, PNPLA3, SUGP1, SAMM50, ARHGEF40, C1orf94, DYSF |
Undrugged target profiles
8 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
| Symbol | ChEMBL assays | Drugged partners (top 3) |
|---|---|---|
| TM6SF2 | 0 | HSD17B13 |
| PNPLA3 | 0 | HSD17B13 |
| SUGP1 | 0 | — |
| SAMM50 | 1 | — |
| ARHGEF40 | 0 | — |
| C1orf94 | 0 | — |
| DYSF | 0 | — |
| LEPR | 3 | — |
Clinical trials & evidence
Clinical trials
Clinical trials: 562.
Phase distribution (across all retrieved trials)
| Phase | Trials |
|---|---|
| Not specified | 209 |
| PHASE2 | 184 |
| PHASE1 | 89 |
| PHASE3 | 34 |
| PHASE1/PHASE2 | 20 |
| PHASE4 | 16 |
| PHASE2/PHASE3 | 7 |
| EARLY_PHASE1 | 3 |
Top trials by phase / activity
| NCT | Phase | Status | Title |
|---|---|---|---|
| NCT04639414 | PHASE4 | ACTIVE_NOT_RECRUITING | Combined Active Treatment in Type 2 Diabetes with NASH |
| NCT05195944 | PHASE4 | ENROLLING_BY_INVITATION | Semaglutide vs Sitagliptin |
| NCT06374875 | PHASE4 | RECRUITING | Fibrosis Lessens After Metabolic Surgery |
| NCT00227110 | PHASE4 | COMPLETED | Role of Pioglitazone in the Treatment of Non-alcoholic Steatohepatitis (NASH) |
| NCT00994682 | PHASE4 | COMPLETED | University of Texas H.S.C. San Antonio Pioglitazone in Non-Alcoholic Steatohepatitis Trial (UTHSCSA NASH Trial) |
| NCT01002547 | PHASE4 | COMPLETED | Prevalence of Non-alcoholic Fatty Liver Disease (NAFLD) in Hispanics With Diabetes Mellitus Type 2 (T2DM) and Role of Treatment |
| NCT01269320 | PHASE4 | WITHDRAWN | Natural Soybean-derived Femarelle ®for Patients With Non Alcoholic Fatty Liver Disease |
| NCT01355575 | PHASE4 | TERMINATED | Rifaximin in Fatty Liver Disease |
| NCT01406704 | PHASE4 | TERMINATED | Effects of Rosiglitazone and Alpha-lipoic Acid on the Patients With Pathologically Proved NASH |
| NCT02210715 | PHASE4 | COMPLETED | Raltegravir-based Antiretroviral Versus Maintaining Any Other Antiretroviral Therapy in HIV Mono-infected Patients |
| NCT03198572 | PHASE4 | UNKNOWN | Efficacy and Safety of Berberine in Non-alcoholic Steatohepatitis |
| NCT03648554 | PHASE4 | UNKNOWN | Researching an Effect of GLP-1 Agonist on Liver STeatosis (REALIST) |
| NCT03950505 | PHASE4 | UNKNOWN | To Evaluate the Effect of Nesinaact on Non-alcoholic Steatohepatitis Through MRI and Liver Fibroscan in Patients With Type 2 Diabetes |
| NCT04537780 | PHASE4 | COMPLETED | Efficacy and Safety of Montelukast in Non Alcoholic Steatohepatitis (NASH) |
| NCT04976283 | PHASE4 | UNKNOWN | Effect of Oral Anti-diabetic Medication on Liver Fat in Subjects With Type II Diabetes and Non-alcoholic Fatty Liver |
| NCT04977661 | PHASE4 | COMPLETED | Comparing the Effects of Vitamin E, Ursodeoxycholic Acid and Pentoxyfylline on Egyptian Non-alcoholic Steatohepatitis (NASH) Patients |
| NCT03900429 | PHASE3 | ACTIVE_NOT_RECRUITING | A Phase 3 Study to Evaluate the Efficacy and Safety of MGL-3196 (Resmetirom) in Patients With NASH and Fibrosis |
| NCT04822181 | PHASE3 | ACTIVE_NOT_RECRUITING | Research Study on Whether Semaglutide Works in People With Non-alcoholic Steatohepatitis (NASH) |
| NCT04833140 | PHASE3 | RECRUITING | Estrogen Administration for the Treatment of NASH in Postmenopausal Women |
| NCT04849728 | PHASE3 | ACTIVE_NOT_RECRUITING | A Phase 3 Study Evaluating Efficacy and Safety of Lanifibranor Followed by an Active Treatment Extension in Adult Patients With (NASH) and Fibrosis Stages F2 and F3 ( NATiV3 ) |
| NCT05500222 | PHASE3 | ACTIVE_NOT_RECRUITING | A Phase 3 Study to Evaluate the Effect of Resmetirom on Clinical Outcomes in Patients With Well-compensated NASH Cirrhosis (MAESTRO-NASH-OUTCOMES) |
| NCT06161571 | PHASE3 | ACTIVE_NOT_RECRUITING | A Study Evaluating Efruxifermin in Subjects With Non-invasively Diagnosed Nonalcoholic Steatohepatitis (NASH)/Metabolic Dysfunction-Associated Steatohepatitis (MASH) and Nonalcoholic Fatty Liver Disease (NAFLD)/Metabolic Dysfunction-Associated Steatotic Liver Disease (MASLD) |
| NCT06528314 | PHASE3 | RECRUITING | A Study Evaluating Efruxifermin in Subjects With Compensated Cirrhosis Due to NASH/MASH |
| NCT06632444 | PHASE3 | RECRUITING | LIVERAGE™: A Study to Test Whether Survodutide Helps People With a Liver Disease Called NASH/MASH Who Have Moderate or Advanced Liver Fibrosis |
| NCT06632457 | PHASE3 | RECRUITING | LIVERAGE™ - Cirrhosis: A Study to Test Whether Survodutide Helps People With a Liver Disease Called NASH/MASH Who Have Cirrhosis |
| NCT07581951 | PHASE3 | NOT_YET_RECRUITING | A Phase 3 Study Evaluating the Safety and Efficacy of HSK31679 in Patients With MASH |
| NCT00267670 | PHASE2/PHASE3 | COMPLETED | Pentoxifylline/Nonalcoholic Steatohepatitis (NASH) Study: The Effect of Pentoxifylline on NASH |
| NCT00509418 | PHASE3 | COMPLETED | Efficacy and Safety of Viusid in Patients With Nonalcoholic Steatohepatitis |
| NCT00678587 | PHASE3 | TERMINATED | Eltrombopag To Reduce The Need For Platelet Transfusion In Subjects With Chronic Liver Disease And Thrombocytopenia Undergoing Elective Invasive Procedures |
| NCT00681408 | PHASE2/PHASE3 | COMPLETED | Omega 3 Fish Oil Supplements vs. Placebo for Patients With Non-alcoholic Steatohepatitis (NASH) |
| NCT00820651 | PHASE3 | COMPLETED | Efficacy and Safety of Diamel in Patients With Nonalcoholic Steatohepatitis |
| NCT01051219 | PHASE3 | COMPLETED | Anti-Fibrotic Effects of Losartan In Nash Evaluation Study |
| NCT01384578 | PHASE3 | WITHDRAWN | Pentoxiphylline and Vitamin E Versus Vitamin E in Patients With Non- Alcoholic Steatohepatitis |
| NCT01791959 | PHASE2/PHASE3 | COMPLETED | The Effects of Synbiotics Supplement on Biochemical Factors and Hepatic Fibrosis in Patients With Nonalcoholic Steatohepatitis |
| NCT02098317 | PHASE3 | COMPLETED | DHA and Vitamin D in Children With Biopsy-proven NAFLD |
| NCT02395900 | PHASE2/PHASE3 | COMPLETED | The Effects of Flaxseed Supplement on Biochemical Factors and Hepatic Fibrosis in Patients With Nonalcoholic Fatty Liver Disease |
| NCT02530138 | PHASE2/PHASE3 | UNKNOWN | The Effect of Synbiotics Supplement on Lipid Profile, Liver Enzymes, Inflammatory Factors and Hepatic Fibrosis in Lean and Normal Weight Patients With Nonalcoholic Fatty Liver |
| NCT02541045 | PHASE3 | WITHDRAWN | Clinical Trial to Evaluate the Efficacy of Metadoxine as a Therapy for Patients With Non-alcoholic Steatohepatitis |
| NCT02548351 | PHASE3 | TERMINATED | Randomized Global Phase 3 Study to Evaluate the Impact on NASH With Fibrosis of Obeticholic Acid Treatment |
| NCT02654665 | PHASE3 | UNKNOWN | Comparing Effects of Liraglutide and Bariatric Surgery on Weight Loss, Liver Function, Body Composition, Insulin Resistance, Endothelial Function and Biomarkers of Non-alcoholic Steatohepatitis (NASH) in Obese Asian Adults |
Drugs tested across these trials (top 30)
| Molecule | Max phase | Trials referencing |
|---|---|---|
| PIOGLITAZONE | 4 | 7 |
| VITAMIN E | 4 | 5 |
| OBETICHOLIC ACID | 4 | 4 |
| RESMETIROM | 4 | 4 |
| URSODIOL | 4 | 4 |
| BERBERINE | 4 | 3 |
| DIOSMIN | 4 | 3 |
| PENTOXIFYLLINE | 4 | 3 |
| DIGOXIN | 4 | 2 |
| ELAFIBRANOR | 4 | 2 |
| METFORMIN | 4 | 2 |
| METRELEPTIN | 4 | 2 |
| ROSIGLITAZONE | 4 | 2 |
| SEMAGLUTIDE | 4 | 2 |
| TESAMORELIN | 4 | 2 |
| BETAINE | 4 | 1 |
| COLESEVELAM HYDROCHLORIDE | 4 | 1 |
| DEFERASIROX | 4 | 1 |
| ELTROMBOPAG | 4 | 1 |
| EMPAGLIFLOZIN | 4 | 1 |
| ETHINYL ESTRADIOL | 4 | 1 |
| FLUVOXAMINE | 4 | 1 |
| FLUVOXAMINE MALEATE | 4 | 1 |
| GLUCAGON | 4 | 1 |
| IDEBENONE | 4 | 1 |
| LEVOCARNITINE | 4 | 1 |
| LEVONORGESTREL | 4 | 1 |
| LEVOTHYROXINE SODIUM | 4 | 1 |
| LISINOPRIL | 4 | 1 |
| LISINOPRIL ANHYDROUS | 4 | 1 |
Related Atlas pages
- Cohort genes: TM6SF2, PNPLA3, SUGP1, HSD17B13, SAMM50, ARHGEF40, C1orf94, DYSF, LEPR, MAP4K5
- Drugs: Pioglitazone, Vitamin E, Obeticholic Acid, Resmetirom, Ursodiol, Berberine, Diosmin, Pentoxifylline, Digoxin, Elafibranor, Metformin, Metreleptin, Rosiglitazone, Semaglutide, Tesamorelin, Betaine, Colesevelam, Deferasirox, Eltrombopag, Empagliflozin, Ethinyl Estradiol, Fluvoxamine, Glucagon, Idebenone, Levocarnitine, Levonorgestrel, Levothyroxine, Lisinopril