Metaphyseal anadysplasia
diseaseOn this page
Also known as early-onset regressive form of metaphyseal dysplasiaMADMaroteaux Verloes Stanescu syndromeMaroteaux-Verloes-Stanescu syndromeregressive metaphyseal dysplasia
Summary
Metaphyseal anadysplasia (MONDO:0015177) is a disease with 2 cohort genes.
At a glance
- Prevalence: <1 / 1 000 000 (Worldwide) [Orphanet-validated]
- Cohort genes: 2
- ClinVar variants: 50
- Phenotypes (HPO): 9
Clinical features
Epidemiology
Prevalence records
2 prevalence record(s), Orphanet:
| Type | Class | Value | Geography | Validation |
|---|---|---|---|---|
| Cases/families | 27 | Worldwide | Validated | |
| Point prevalence | <1 / 1 000 000 | Worldwide | Validated |
Signs & symptoms
Clinical features (HPO)
9 HPO clinical features (Orphanet curated; top 9 by frequency):
| HPO ID | Term | Frequency |
|---|---|---|
| HP:0000944 | Abnormal metaphysis morphology | Very frequent (80-99%) |
| HP:0001387 | Joint stiffness | Very frequent (80-99%) |
| HP:0002814 | Abnormality of the lower limb | Very frequent (80-99%) |
| HP:0004039 | Abnormality of ulnar metaphysis | Very frequent (80-99%) |
| HP:0004322 | Short stature | Very frequent (80-99%) |
| HP:0005930 | Abnormality of epiphysis morphology | Very frequent (80-99%) |
| HP:0006487 | Bowing of the long bones | Very frequent (80-99%) |
| HP:0006501 | Aplasia/Hypoplasia of the radius | Very frequent (80-99%) |
| HP:0040071 | Abnormal morphology of ulna | Very frequent (80-99%) |
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | metaphyseal anadysplasia |
| Mondo ID | MONDO:0015177 |
| MeSH | C537351 |
| OMIM | 309645 |
| Orphanet | 1040 |
| ICD-11 | 327336919 |
| SNOMED CT | 254085009 |
| UMLS | C0432226 |
| MedGen | 96582 |
| GARD | 0003562 |
| Is cancer (heuristic) | no |
Also known as: early-onset regressive form of metaphyseal dysplasia · MAD · Maroteaux Verloes Stanescu syndrome · Maroteaux-Verloes-Stanescu syndrome · regressive metaphyseal dysplasia
Data availability: 50 ClinVar variants · 2 GenCC gene-disease records.
Disease family
An umbrella term covering 1 Mondo subtype.
Classification path: disease › human disease › disease by etiologic mechanism › disease of genetic or genomic mechanism › hereditary disease › skeletal dysplasia › metaphyseal anadysplasia
Related subtypes (118): osteochondrodysplasia, diaphyseal medullary stenosis-bone malignancy syndrome, fibular aplasia-ectrodactyly syndrome, cerebrocostomandibular syndrome, cleidorhizomelic syndrome, dyschondrosteosis-nephritis syndrome, dysplasia epiphysealis hemimelica, carpotarsal osteochondromatosis, Camurati-Engelmann disease, genochondromatosis, autosomal dominant osteosclerosis, Worth type, coxopodopatellar syndrome, Lenz-Majewski hyperostotic dwarfism, delayed membranous cranial ossification, metaphyseal dysplasia-maxillary hypoplasia-brachydacty syndrome, oculodentodigital dysplasia, Ollier disease, osteoglophonic dysplasia, parietal foramina with cleidocranial dysplasia, chondromalacia patellae, Currarino triad, Proteus syndrome, brachydactyly-elbow wrist dysplasia syndrome, tricho-dento-osseous syndrome, bird headed-dwarfism, Montreal type, Yunis-Varon syndrome, split hand-foot malformation 1 with sensorineural hearing loss, ghosal hematodiaphyseal dysplasia, hyperostosis corticalis generalisata, Larsen-like syndrome, B3GAT3 type, mesomelic dwarfism-cleft palate-camptodactyly syndrome, metaphyseal acroscyphodysplasia, metaphyseal dysostosis-intellectual disability-conductive deafness syndrome, familial osteodysplasia, Anderson type, pseudodiastrophic dysplasia, rhizomelic syndrome, Urbach type, Richieri Costa-Pereira syndrome, craniometadiaphyseal dysplasia, wormian bone type, Weaver syndrome, SHOX-related short stature, craniofrontonasal syndrome, Eiken syndrome, 2q37 microdeletion syndrome, skeletal dysplasia-epilepsy-short stature syndrome, rhizomelic dysplasia, Patterson-Lowry type, pelvic dysplasia-arthrogryposis of lower limbs syndrome, Marshall-Smith syndrome, baby rattle pelvis dysplasia, metaphyseal dysplasia, Braun-Tinschert type, genitopatellar syndrome, osteofibrous dysplasia, Larsen-like osseous dysplasia-short stature syndrome, pancreatic insufficiency-anemia-hyperostosis syndrome, microcephalic primordial dwarfism due to ZNF335 deficiency, Hartsfield-Bixler-Demyer syndrome, colobomatous microphthalmia-rhizomelic dysplasia syndrome, Tatton-Brown-Rahman overgrowth syndrome, tall stature-scoliosis-macrodactyly of the great toes syndrome, Catel-Manzke syndrome, cognitive impairment - coarse facies - heart defects - obesity - pulmonary involvement - short stature - skeletal dysplasia syndrome, skeletal overgrowth-craniofacial dysmorphism-hyperelastic skin-white matter lesions syndrome, complex lethal osteochondrodysplasia, amniotic band syndrome, syndromic craniosynostosis, thin ribs-tubular bones-dysmorphism syndrome, dysplasia of head of femur, Meyer type, epimetaphyseal skeletal dysplasia, melorheostosis with osteopoikilosis, Cole-Carpenter syndrome, spondylometaphyseal dysplasia, omodysplasia, Bruck syndrome, osteopetrosis, congenital absence of upper arm and forearm with hand present, congenital absence of thigh and lower leg with foot present, congenital absence of both forearm and hand, congenital absence of both lower leg and foot, acheiria, apodia, chondroectodermal dysplasia with night blindness, TRPV4-related bone disorder, adactyly of foot, short stature-advanced bone age-early-onset osteoarthritis syndrome, McCune-Albright syndrome, parietal foramina, Sotos syndrome, dysspondyloenchondromatosis, autosomal recessive cutis laxa type 2, FGFR3-related chondrodysplasia, filamin-related bone disorder, short rib dysplasia, spondylodysplastic dysplasia, acromelic dysplasia, bent bone dysplasia, chondrodysplasia punctata, primary osteolysis, non-syndromic limb reduction defect, Robinow syndrome, synpolydactyly, acrocoxomesomelic dysplasia, bone dysplasia Moore type, bone dysplasia corpus callosum agenesis, type 2 collagenopathy, LRP5-related primary osteoporosis, SLC26A2-related skeletal dysplasia, COMP-related skeletal dysplasia, primordial dwarfism and slender bone disorder, polydactyly-syndactyly-triphalangism, lysosomal storage disease with skeletal involvement, abnormal mineralization disorder, calvarial doughnut lesions with bone fragility and spondylometaphyseal dysplasia, de la Chapelle dysplasia, mesomelic dysplasia-digital anomalies-intellectual disability syndrome, proximal femoral focal deficiency, rhizomelic dysplasia, Ain-Naz type, craniotubular dysplasia, Ikegawa type, TRIP11-related skeletal dysplasia, FAM111A-related skeletal dysplasia
Subtypes (1): metaphyseal anadysplasia 2
Genetics & variants
GWAS landscape
No GWAS associations recorded — common-variant (GWAS) studies don’t cover this disease (typical for Mendelian / rare diseases). See the curated gene cohort and Mendelian overlap below.
Variant details and genetic-evidence tiers
ClinVar germline variants
50 retrieved; paginated sample, class counts are floors:
21 uncertain significance, 17 conflicting classifications of pathogenicity, 9 benign/likely benign, 3 benign
| ClinVar | Variant (HGVS) | Gene | Classification | Review |
|---|---|---|---|---|
| 301991 | NM_002427.4(MMP13):c.138C>T (p.Tyr46=) | LOC126861318 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 301992 | NM_002427.4(MMP13):c.52C>T (p.Arg18Trp) | LOC126861318 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 196346 | NM_002427.4(MMP13):c.438C>T (p.Ser146=) | MMP13 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 301958 | NM_002427.4(MMP13):c.*1219A>C | MMP13 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 301973 | NM_002427.4(MMP13):c.*160G>A | MMP13 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 301974 | NM_002427.4(MMP13):c.1372C>T (p.Arg458Cys) | MMP13 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 301975 | NM_002427.4(MMP13):c.1315+15T>C | MMP13 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 301981 | NM_002427.4(MMP13):c.968C>T (p.Thr323Met) | MMP13 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 301982 | NM_002427.4(MMP13):c.951T>G (p.Asp317Glu) | MMP13 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 301983 | NM_002427.4(MMP13):c.935A>G (p.His312Arg) | MMP13 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 301987 | NM_002427.4(MMP13):c.770A>T (p.Asp257Val) | MMP13 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 301989 | NM_002427.4(MMP13):c.509A>C (p.Lys170Thr) | MMP13 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 717251 | NM_002427.4(MMP13):c.1101C>G (p.Pro367=) | MMP13 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 879276 | NM_002427.4(MMP13):c.*156A>G | MMP13 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 879278 | NM_002427.4(MMP13):c.*13A>T | MMP13 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 880460 | NM_002427.4(MMP13):c.1315+12C>T | MMP13 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 880506 | NM_002427.4(MMP13):c.756T>C (p.Phe252=) | MMP13 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 301990 | NM_002427.4(MMP13):c.301G>T (p.Val101Leu) | LOC126861318 | Uncertain significance | criteria provided, multiple submitters, no conflicts |
| 301959 | NM_002427.4(MMP13):c.*1102T>C | MMP13 | Uncertain significance | criteria provided, single submitter |
| 301960 | NM_002427.4(MMP13):c.*1007T>C | MMP13 | Uncertain significance | criteria provided, single submitter |
| 301964 | NM_002427.4(MMP13):c.*771T>G | MMP13 | Uncertain significance | criteria provided, single submitter |
| 301965 | NM_002427.4(MMP13):c.*756A>G | MMP13 | Uncertain significance | criteria provided, single submitter |
| 301967 | NM_002427.4(MMP13):c.*436G>C | MMP13 | Uncertain significance | criteria provided, single submitter |
| 301971 | NM_002427.4(MMP13):c.*275T>C | MMP13 | Uncertain significance | criteria provided, single submitter |
| 301972 | NM_002427.4(MMP13):c.*264C>T | MMP13 | Uncertain significance | criteria provided, single submitter |
| 301977 | NM_002427.4(MMP13):c.1123C>T (p.Leu375Phe) | MMP13 | Uncertain significance | criteria provided, single submitter |
| 301978 | NM_002427.4(MMP13):c.1082A>G (p.Asp361Gly) | MMP13 | Uncertain significance | criteria provided, single submitter |
| 301980 | NM_002427.4(MMP13):c.997C>T (p.Arg333Cys) | MMP13 | Uncertain significance | criteria provided, multiple submitters, no conflicts |
| 301988 | NM_002427.4(MMP13):c.686G>T (p.Gly229Val) | MMP13 | Uncertain significance | criteria provided, single submitter |
| 877656 | NM_002427.4(MMP13):c.*723A>T | MMP13 | Uncertain significance | criteria provided, single submitter |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 14 · Orphanet: 4 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
GenCC gene–disease validity (cohort genes)
the Disease column is the GenCC-asserted condition — a cohort gene’s strongest validity may be for a related predisposition syndrome.
| Gene | Classification | Inheritance | Disease | Records |
|---|---|---|---|---|
| MMP13 | Definitive | Autosomal recessive | metaphyseal chondrodysplasia, Spahr type | 11 |
| MMP9 | Strong | Autosomal recessive | metaphyseal anadysplasia 2 | 3 |
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|---|---|
| MMP13 | Orphanet:1040 | Metaphyseal anadysplasia |
| MMP13 | Orphanet:2501 | Metaphyseal chondrodysplasia, Spahr type |
| MMP13 | Orphanet:93356 | Spondyloepimetaphyseal dysplasia, Missouri type |
| MMP9 | Orphanet:1040 | Metaphyseal anadysplasia |
Cohort genes → proteins
2 cohort genes, 2 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|---|
| multi_evidence | 2 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|---|---|---|---|---|
| MMP13 | HGNC:7159 | ENSG00000137745 | P45452 | Collagenase 3 | gencc,clinvar |
| MMP9 | HGNC:7176 | ENSG00000100985 | P14780 | Matrix metalloproteinase-9 | gencc |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|---|---|
| MMP13 | Collagenase 3 | Plays a role in the degradation of extracellular matrix proteins including fibrillar collagen, fibronectin, TNC and ACAN. |
| MMP9 | Matrix metalloproteinase-9 | Matrix metalloproteinase that plays an essential role in local proteolysis of the extracellular matrix and in leukocyte migration. |
Protein-family classification
Druggable: 2 · Difficult: 0 · Unknown: 0 · Druggable fraction: 1.0
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|---|---|---|
| Protease | 2 | 36.6× | 7e-04 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|---|---|---|---|
| MMP13 | Protease | yes | 3.4.24.17 | Hemopexin-like_dom, Pept_M10_metallopeptidase, Peptidoglycan-bd-like |
| MMP9 | Protease | yes | 3.4.24.35 | FN_type2_dom, Hemopexin-like_dom, Pept_M10_metallopeptidase |
Expression context
Cohort genes with no expression data: 0.
2 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 0 |
| broad (>20) | 2 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|---|
| periodontal ligament | 2 |
| tibia | 2 |
| cartilage tissue | 1 |
| trabecular bone tissue | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|---|---|---|---|
| MMP13 | 62 | tissue_specific | marker | periodontal ligament, cartilage tissue, tibia |
| MMP9 | 204 | broad | marker | periodontal ligament, trabecular bone tissue, tibia |
Protein interactions among cohort
Intra-cohort edges: 0.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|---|
| MMP9 | 6,708 |
| MMP13 | 2,467 |
Structural data
PDB: 2 · AlphaFold-only: 0 · No structure: 0
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|---|---|
| MMP13 | P45452 | 49 |
| MMP9 | P14780 | 29 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 29. Enrichment computed across 2 evidence-associated genes (2 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 2 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| Collagen formation | 2 | 456.8× | 1e-04 | MMP13, MMP9 |
| Activation of Matrix Metalloproteinases | 2 | 308.6× | 1e-04 | MMP13, MMP9 |
| Assembly of collagen fibrils and other multimeric structures | 2 | 200.3× | 2e-04 | MMP13, MMP9 |
| Collagen degradation | 2 | 175.7× | 2e-04 | MMP13, MMP9 |
| Degradation of the extracellular matrix | 2 | 117.7× | 4e-04 | MMP13, MMP9 |
| Extracellular matrix organization | 2 | 63.1× | 0.001 | MMP13, MMP9 |
| RUNX2 regulates genes involved in cell migration | 1 | 713.8× | 0.006 | MMP13 |
| Transcriptional regulation by RUNX2 | 1 | 126.9× | 0.026 | MMP13 |
| Signaling by SCF-KIT | 1 | 124.1× | 0.026 | MMP9 |
| EPH-ephrin mediated repulsion of cells | 1 | 109.8× | 0.026 | MMP9 |
| Extra-nuclear estrogen signaling | 1 | 85.2× | 0.029 | MMP9 |
| EPH-Ephrin signaling | 1 | 82.8× | 0.029 | MMP9 |
| ESR-mediated signaling | 1 | 64.2× | 0.035 | MMP9 |
| Interleukin-4 and Interleukin-13 signaling | 1 | 51.4× | 0.038 | MMP9 |
| Signaling by Nuclear Receptors | 1 | 51.0× | 0.038 | MMP9 |
| Signaling by Interleukins | 1 | 32.1× | 0.056 | MMP9 |
| Signaling by Receptor Tyrosine Kinases | 1 | 25.8× | 0.065 | MMP9 |
| Dengue Virus-Host Interactions | 1 | 22.8× | 0.067 | MMP9 |
| Axon guidance | 1 | 22.6× | 0.067 | MMP9 |
| Nervous system development | 1 | 21.5× | 0.067 | MMP9 |
| Cytokine Signaling in Immune system | 1 | 20.4× | 0.067 | MMP9 |
| Innate Immune System | 1 | 12.8× | 0.101 | MMP9 |
| Neutrophil degranulation | 1 | 11.5× | 0.105 | MMP9 |
| RNA Polymerase II Transcription | 1 | 11.3× | 0.105 | MMP13 |
| Gene expression (Transcription) | 1 | 8.9× | 0.126 | MMP13 |
| Generic Transcription Pathway | 1 | 7.5× | 0.143 | MMP13 |
| Developmental Biology | 1 | 7.2× | 0.143 | MMP9 |
| Immune System | 1 | 6.5× | 0.154 | MMP9 |
| Signal Transduction | 1 | 5.1× | 0.187 | MMP9 |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 2 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| response to amyloid-beta | 2 | 991.3× | 3e-05 | MMP13, MMP9 |
| collagen catabolic process | 2 | 391.9× | 7e-05 | MMP13, MMP9 |
| extracellular matrix disassembly | 2 | 366.4× | 7e-05 | MMP13, MMP9 |
| extracellular matrix organization | 2 | 122.1× | 5e-04 | MMP13, MMP9 |
| negative regulation of cation transmembrane transport | 1 | 8426.0× | 6e-04 | MMP9 |
| negative regulation of epithelial cell differentiation involved in kidney development | 1 | 8426.0× | 6e-04 | MMP9 |
| growth plate cartilage development | 1 | 1053.2× | 0.004 | MMP13 |
| proteolysis | 2 | 34.2× | 0.004 | MMP13, MMP9 |
| cellular response to UV-A | 1 | 702.2× | 0.004 | MMP9 |
| regulation of neuroinflammatory response | 1 | 702.2× | 0.004 | MMP9 |
| positive regulation of keratinocyte migration | 1 | 648.1× | 0.004 | MMP9 |
| positive regulation of DNA binding | 1 | 601.9× | 0.004 | MMP9 |
| positive regulation of release of cytochrome c from mitochondria | 1 | 383.0× | 0.006 | MMP9 |
| negative regulation of intrinsic apoptotic signaling pathway | 1 | 383.0× | 0.006 | MMP9 |
| bone morphogenesis | 1 | 300.9× | 0.007 | MMP13 |
| endochondral ossification | 1 | 271.8× | 0.007 | MMP13 |
| endodermal cell differentiation | 1 | 247.8× | 0.007 | MMP9 |
| positive regulation of epidermal growth factor receptor signaling pathway | 1 | 247.8× | 0.007 | MMP9 |
| macrophage differentiation | 1 | 234.1× | 0.007 | MMP9 |
| positive regulation of vascular associated smooth muscle cell proliferation | 1 | 216.1× | 0.007 | MMP9 |
| embryo implantation | 1 | 175.5× | 0.008 | MMP9 |
| ephrin receptor signaling pathway | 1 | 172.0× | 0.008 | MMP9 |
| positive regulation of protein phosphorylation | 1 | 138.1× | 0.009 | MMP9 |
| bone mineralization | 1 | 135.9× | 0.009 | MMP13 |
| skeletal system development | 1 | 62.9× | 0.019 | MMP9 |
| cellular response to lipopolysaccharide | 1 | 49.0× | 0.023 | MMP9 |
| cell migration | 1 | 30.8× | 0.036 | MMP9 |
| positive regulation of apoptotic process | 1 | 28.4× | 0.037 | MMP9 |
| negative regulation of apoptotic process | 1 | 17.4× | 0.059 | MMP9 |
| apoptotic process | 1 | 14.3× | 0.068 | MMP9 |
Therapeutics
Drug target analysis
Approved (phase 4): 2 · Phase ≥3: 2 · Phased (≥1): 2 · Undrugged: 0
Druggability breadth: 2 of 2 evidence-associated genes (100%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Genes with an approved drug
The molecule shown is one approved compound that hits the gene — not necessarily a drug of choice or one indicated for this disease.
| Symbol | Example approved molecule |
|---|---|
| MMP13 | CHLOROXINE |
| MMP9 | CHLOROXINE |
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|---|---|
| MMP9 | 26 | 4 |
| MMP13 | 13 | 4 |
Drugs targeting cohort genes (top 30)
| Molecule | Max phase | Targets in cohort |
|---|---|---|
| CHLOROXINE | 4 | MMP13, MMP9 |
| DOXYCYCLINE | 4 | MMP13 |
| BUDESONIDE | 4 | MMP9 |
| PRAZOSIN | 4 | MMP9 |
| ZOLEDRONIC ACID | 4 | MMP9 |
| SECOBARBITAL | 4 | MMP9 |
| DACARBAZINE | 4 | MMP9 |
| CHLORHEXIDINE | 4 | MMP9 |
| ECONAZOLE | 4 | MMP9 |
| BUSULFAN | 4 | MMP9 |
| CURCUMIN | 3 | MMP13, MMP9 |
| MARIMASTAT | 3 | MMP13, MMP9 |
| QUERCETIN | 3 | MMP13, MMP9 |
| PRINOMASTAT | 3 | MMP13, MMP9 |
| CAFFEIC ACID | 3 | MMP9 |
| CIPEMASTAT | 2 | MMP13, MMP9 |
| LUTEOLIN | 2 | MMP13, MMP9 |
| ILOMASTAT | 2 | MMP13, MMP9 |
| APRATASTAT | 2 | MMP13, MMP9 |
| TANOMASTAT | 2 | MMP13, MMP9 |
| BATIMASTAT | 2 | MMP13, MMP9 |
| CTS-1027 | 2 | MMP13, MMP9 |
| TOSEDOSTAT | 2 | MMP9 |
| SOLIMASTAT | 2 | MMP9 |
| REBIMASTAT | 2 | MMP9 |
| AMINOQUINURIDE | 2 | MMP9 |
| S-3304 | 1 | MMP9 |
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 2.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|---|---|
| MMP9 | 713 | Binding:685, ADMET:20, Functional:8 |
| MMP13 | 452 | Binding:435, ADMET:8, Functional:6, Unclassified:3 |
Cohort enzymes (BRENDA EC)
| Symbol | EC numbers | Names |
|---|---|---|
| MMP13 | 3.4.24.17, 3.4.24.35, 3.4.24.65, 3.4.24.B4 | stromelysin 1, gelatinase B, macrophage elastase, |
| MMP9 | 3.4.24.35 | gelatinase B |
Cohort genes with high screening signal
≥100 ChEMBL assays — a studied-ness signal; see Therapeutics for approved-drug status.
| Symbol | ChEMBL assays |
|---|---|
| MMP13 | 452 |
| MMP9 | 713 |
Pharmacogenomics
Cohort genes with a PharmGKB record: 2; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Chemical tractability of cohort targets
27 approved/phased compounds have measured bioactivity against a cohort gene (and aren’t yet in disease-level trials). This is a research / tractability signal, NOT a therapeutic recommendation — a bioactivity row often reflects off-target or screening binding (e.g. promiscuous kinase inhibitors against a cohort kinase), implying no disease mechanism.
| Compound | Max phase | Cohort target (bioactivity) |
|---|---|---|
| CHLOROXINE | 4 | MMP13, MMP9 |
| DOXYCYCLINE | 4 | MMP13 |
| BUDESONIDE | 4 | MMP9 |
| PRAZOSIN | 4 | MMP9 |
| ZOLEDRONIC ACID | 4 | MMP9 |
| SECOBARBITAL | 4 | MMP9 |
| DACARBAZINE | 4 | MMP9 |
| CHLORHEXIDINE | 4 | MMP9 |
| ECONAZOLE | 4 | MMP9 |
| BUSULFAN | 4 | MMP9 |
| CURCUMIN | 3 | MMP13, MMP9 |
| MARIMASTAT | 3 | MMP13, MMP9 |
| QUERCETIN | 3 | MMP13, MMP9 |
| PRINOMASTAT | 3 | MMP13, MMP9 |
| CAFFEIC ACID | 3 | MMP9 |
| CIPEMASTAT | 2 | MMP13, MMP9 |
| LUTEOLIN | 2 | MMP13, MMP9 |
| ILOMASTAT | 2 | MMP13, MMP9 |
| APRATASTAT | 2 | MMP13, MMP9 |
| TANOMASTAT | 2 | MMP13, MMP9 |
| BATIMASTAT | 2 | MMP13, MMP9 |
| CTS-1027 | 2 | MMP13, MMP9 |
| TOSEDOSTAT | 2 | MMP9 |
| SOLIMASTAT | 2 | MMP9 |
| REBIMASTAT | 2 | MMP9 |
| AMINOQUINURIDE | 2 | MMP9 |
| S-3304 | 1 | MMP9 |
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|---|---|---|
| A | Approved (phase 4 drug) | 2 | MMP13, MMP9 |
| B | Phased (≥1) drug, not yet approved | 0 | |
| C | Druggable family + PDB, no drug | 0 | |
| D | Druggable family + AlphaFold only, no drug | 0 | |
| E | Difficult family or no structure, no drug | 0 |
Undrugged target profiles
0 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
Clinical trials & evidence
Clinical trials
Clinical trials: 0.