Mixed connective tissue disease
diseaseOn this page
Also known as MCTDsharp syndrome
Summary
Mixed connective tissue disease (MONDO:0005854) is a disease with 23 GWAS associations across 4 studies and 13 clinical trials. Top therapeutic interventions include cyclophosphamide anhydrous, yellow fever vaccine, and mhv-370. A subtype of rheumatic disorder — broader associated-gene and molecular evidence is on the parent page (see Disease family below).
At a glance
- Prevalence: 1-9 / 100 000 (Norway) [Orphanet-validated]
- GWAS associations: 23
- Phenotypes (HPO): 68
- Clinical trials: 13
Clinical features
Epidemiology
Prevalence records
6 prevalence record(s), Orphanet:
| Type | Class | Value | Geography | Validation |
|---|---|---|---|---|
| Annual incidence | 1-9 / 1 000 000 | 0.17 | Norway | Validated |
| Annual incidence | 1-9 / 100 000 | 1.9 | United States | Validated |
| Annual incidence | 1-9 / 1 000 000 | 0.8 | Finland | Validated |
| Point prevalence | 1-9 / 100 000 | 3 | Norway | Validated |
| Point prevalence | 1-9 / 100 000 | 2.7 | Japan | Validated |
| Point prevalence | 1-9 / 100 000 | Europe | Not yet validated |
Signs & symptoms
Clinical features (HPO)
68 HPO clinical features (Orphanet curated; top 50 by frequency):
| HPO ID | Term | Frequency |
|---|---|---|
| HP:0000988 | Skin rash | Very frequent (80-99%) |
| HP:0001369 | Arthritis | Very frequent (80-99%) |
| HP:0002020 | Gastroesophageal reflux | Very frequent (80-99%) |
| HP:0002094 | Dyspnea | Very frequent (80-99%) |
| HP:0002206 | Pulmonary fibrosis | Very frequent (80-99%) |
| HP:0002960 | Autoimmunity | Very frequent (80-99%) |
| HP:0003326 | Myalgia | Very frequent (80-99%) |
| HP:0003565 | Elevated erythrocyte sedimentation rate | Very frequent (80-99%) |
| HP:0005263 | Gastritis | Very frequent (80-99%) |
| HP:0012378 | Fatigue | Very frequent (80-99%) |
| HP:0100324 | Scleroderma | Very frequent (80-99%) |
| HP:0100749 | Chest pain | Very frequent (80-99%) |
| HP:0001945 | Fever | Frequent (30-79%) |
| HP:0002102 | Pleuritis | Frequent (30-79%) |
| HP:0002829 | Arthralgia | Frequent (30-79%) |
| HP:0002923 | Rheumatoid factor positive | Frequent (30-79%) |
| HP:0007514 | Edema of the dorsum of hands | Frequent (30-79%) |
| HP:0010702 | Increased circulating antibody level | Frequent (30-79%) |
| HP:0011838 | Sclerodactyly | Frequent (30-79%) |
| HP:0020151 | Anti-dsDNA antibody positivity | Frequent (30-79%) |
| HP:0030880 | Raynaud phenomenon | Frequent (30-79%) |
| HP:0033028 | Anti-U1 ribonucleoprotein antibody positivity | Frequent (30-79%) |
| HP:0034076 | Anti-ribosome Po antibody positivity | Frequent (30-79%) |
| HP:0034092 | Anti-cyclic citrullinated peptide antibody positivity | Frequent (30-79%) |
| HP:0034093 | Anti-Ro52/TRIM21 antibody positivity | Frequent (30-79%) |
| HP:0100614 | Myositis | Frequent (30-79%) |
| HP:0100661 | Trigeminal neuralgia | Frequent (30-79%) |
| HP:0000217 | Xerostomia | Frequent (30-79%) |
| HP:0000709 | Psychosis | Frequent (30-79%) |
| HP:0001097 | Keratoconjunctivitis sicca | Frequent (30-79%) |
| HP:0001386 | Joint swelling | Frequent (30-79%) |
| HP:0000093 | Proteinuria | Occasional (5-29%) |
| HP:0000112 | Nephropathy | Occasional (5-29%) |
| HP:0000155 | Oral ulcer | Occasional (5-29%) |
| HP:0000365 | Hearing impairment | Occasional (5-29%) |
| HP:0000716 | Depression | Occasional (5-29%) |
| HP:0000979 | Purpura | Occasional (5-29%) |
| HP:0001009 | Telangiectasia | Occasional (5-29%) |
| HP:0001250 | Seizure | Occasional (5-29%) |
| HP:0001387 | Joint stiffness | Occasional (5-29%) |
| HP:0001596 | Alopecia | Occasional (5-29%) |
| HP:0001698 | Pericardial effusion | Occasional (5-29%) |
| HP:0001701 | Pericarditis | Occasional (5-29%) |
| HP:0001744 | Splenomegaly | Occasional (5-29%) |
| HP:0001873 | Thrombocytopenia | Occasional (5-29%) |
| HP:0001878 | Hemolytic anemia | Occasional (5-29%) |
| HP:0001882 | Leukopenia | Occasional (5-29%) |
| HP:0002092 | Pulmonary arterial hypertension | Occasional (5-29%) |
| HP:0002239 | Gastrointestinal hemorrhage | Occasional (5-29%) |
| HP:0002315 | Headache | Occasional (5-29%) |
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | mixed connective tissue disease |
| Mondo ID | MONDO:0005854 |
| EFO | EFO:0007374 |
| MeSH | D008947 |
| Orphanet | 809 |
| DOID | DOID:3492 |
| ICD-11 | 891652224 |
| NCIT | C84892 |
| SNOMED CT | 398049005 |
| UMLS | C0026272 |
| MedGen | 10069 |
| GARD | 0007051 |
| MedDRA | 10027754 |
| NORD | 1451 |
| Is cancer (heuristic) | no |
Also known as: MCTD · sharp syndrome
Data availability: 23 GWAS associations (4 studies) · 7 cell lines.
Disease family
This is a subtype of rheumatic disorder. Genetic, therapeutic, and trial evidence is largely curated at the broader-term level — see the parent page for the associated-gene cohort and molecular evidence.
Classification path: disease › human disease › disease by body system or component › connective tissue disorder › rheumatic disorder › mixed connective tissue disease
Related subtypes (29): palindromic rheumatism, rheumatic pulmonary valve disease, lupus erythematosus, Reye syndrome, Wissler syndrome, acroosteolysis dominant type, chondrocalcinosis 2, Gorham-Stout disease, rheumatoid arthritis, camptodactyly-arthropathy-coxa vara-pericarditis syndrome, juvenile idiopathic arthritis, sweet syndrome, dermatomyositis, IL10-related early-onset inflammatory bowel disease, unexplained long-lasting fever/inflammatory syndrome, myalgia-eosinophilia syndrome associated with tryptophan, reactive arthritis, rheumatic fever, intermittent hydrarthrosis, fibroblastic rheumatism, interstitial granulomatous dermatitis with arthritis, scleroderma, idiopathic juvenile osteoporosis, polymyalgia rheumatica, autoinflammatory syndrome, progeria-associated arthropathy, LAMA5-related multisystemic syndrome, rheumatic disease of mitral valve, isolated sternocostoclavicular hyperostosis
Genetics & variants
GWAS landscape
23 GWAS associations across 4 studies. Top hits map to 15 distinct genes (as reported by GWAS).
Top associations by p-value
| rsID | p-value | Gene | Risk allele | Odds ratio |
|---|---|---|---|---|
| rs182529846 | 5e-14 | EIF2S2P3 - HHEX | T | 4.03 |
| rs562481287 | 6e-14 | SSX2IP - LPAR3 | A | 4.28 |
| rs139695700 | 3e-13 | EPIC1 - MIR3201 | T | 2.92 |
| rs141880493 | 4e-13 | LINC02315 - LRFN5-DT | A | 3.2 |
| rs189923567 | 4e-13 | KCNMB2, KCNMB2-AS1 | C | 3.7 |
| rs548960401 | 5e-13 | TRIM55 | T | 3.24 |
| rs149527404 | 1e-12 | OR7E33P - ELL2P3 | A | 3.69 |
| rs542312023 | 2e-12 | UIMC1 | C | 3.73 |
| rs548897351 | 4e-12 | PTGIS | G | 4.47 |
| rs566706373 | 7e-12 | SLC4A10 | G | 2.6 |
| rs188107551 | 8e-12 | PTPRN2 | G | 3.89 |
| rs138559816 | 9e-12 | PFKP | G | 2.64 |
| rs559354294 | 9e-12 | RPL34P27 - LSP1P1 | C | 2.37 |
| rs564525845 | 1e-11 | MYRIP | T | 3.15 |
| rs187257955 | 1e-11 | NPM1P17 - SOX14 | A | 2.85 |
| rs139886054 | 2e-11 | BASP1 | A | 5.72 |
| rs187248060 | 2e-11 | PCLO | G | 3.1 |
| rs566347593 | 2e-11 | LINC02140 - LINC02183 | A | 3.15 |
| rs183986544 | 2e-11 | LINC01940 - HDAC4 | C | 3.36 |
| rs570063769 | 3e-11 | LRP11 | C | 2.52 |
| rs556131763 | 4e-11 | PBLD | G | 3.88 |
| rs550191976 | 4e-11 | CDH4 | A | 3.68 |
| rs182995751 | 4e-11 | SPOP | C | 3.28 |
Top studies (by case count)
| Study | Lead author | Year | Cases | Controls | Title |
|---|---|---|---|---|---|
| GCST90436640 | Zhou W | 2018 | 2,720 | 399,404 | Efficiently controlling for case-control imbalance and sample relatedness in large-scale genetic association studies. |
| GCST90482374 | Verma A | 2024 | 430 | 450,463 | Diversity and scale: Genetic architecture of 2068 traits in the VA Million Veteran Program. |
| GCST90480488 | Verma A | 2024 | 290 | 121,440 | Diversity and scale: Genetic architecture of 2068 traits in the VA Million Veteran Program. |
| GCST90482373 | Verma A | 2024 | 290 | 121,440 | Diversity and scale: Genetic architecture of 2068 traits in the VA Million Veteran Program. |
Variant details and genetic-evidence tiers
Tier distribution (top 50 variants)
| Tier | Variants |
|---|---|
| Tier 1: coding | 0 |
| Tier 2: splice/UTR | 0 |
| Tier 3: regulatory | 0 |
| Tier 4: intronic/intergenic | 23 |
MAF distribution
| Bucket | Variants |
|---|---|
| common (>=0.05) | 0 |
| low_freq (0.01-0.05) | 0 |
| rare (<0.01) | 23 |
| unknown | 0 |
Functional consequences
| Consequence | Count |
|---|---|
| intron_variant | 14 |
| intergenic_variant | 9 |
Top variants
| rsID | Chr | Pos | Alleles | MAF | Consequence | Gene | p-value | Tier |
|---|---|---|---|---|---|---|---|---|
| rs182529846 | 10 | 92688993 | T>A | 0 | intergenic_variant | EIF2S2P3 - HHEX | 5e-14 | Tier 4: intronic/intergenic |
| rs562481287 | 1 | 84795499 | A>G | 0 | intron_variant | SSX2IP - LPAR3 | 6e-14 | Tier 4: intronic/intergenic |
| rs139695700 | 22 | 48245558 | T>G | 0.001 | intergenic_variant | EPIC1 - MIR3201 | 3e-13 | Tier 4: intronic/intergenic |
| rs141880493 | 14 | 41321786 | A>C,G | 0.001 | intergenic_variant | LINC02315 - LRFN5-DT | 4e-13 | Tier 4: intronic/intergenic |
| rs189923567 | 3 | 178617931 | C>T | 0 | intron_variant | KCNMB2, KCNMB2-AS1 | 4e-13 | Tier 4: intronic/intergenic |
| rs548960401 | 8 | 66134077 | T>C | 0 | intron_variant | TRIM55 | 5e-13 | Tier 4: intronic/intergenic |
| rs149527404 | 13 | 68266841 | A>G | 0.001 | intergenic_variant | OR7E33P - ELL2P3 | 1e-12 | Tier 4: intronic/intergenic |
| rs542312023 | 5 | 176945540 | C>T | 0.001 | intron_variant | UIMC1 | 2e-12 | Tier 4: intronic/intergenic |
| rs548897351 | 20 | 49546062 | G>A | 0 | intron_variant | PTGIS | 4e-12 | Tier 4: intronic/intergenic |
| rs566706373 | 2 | 161559018 | G>A,C,T | 0.004 | intergenic_variant | SLC4A10 | 7e-12 | Tier 4: intronic/intergenic |
| rs188107551 | 7 | 157650994 | G>A,T | 0 | intron_variant | PTPRN2 | 8e-12 | Tier 4: intronic/intergenic |
| rs138559816 | 10 | 3124523 | G>A | 0.001 | intron_variant | PFKP | 9e-12 | Tier 4: intronic/intergenic |
| rs559354294 | 13 | 24992497 | C>T | 0.001 | intergenic_variant | RPL34P27 - LSP1P1 | 9e-12 | Tier 4: intronic/intergenic |
| rs564525845 | 3 | 39825776 | T>C,G | 0.001 | intron_variant | MYRIP | 1e-11 | Tier 4: intronic/intergenic |
| rs187257955 | 3 | 137746077 | A>C,G | 0.001 | intergenic_variant | NPM1P17 - SOX14 | 1e-11 | Tier 4: intronic/intergenic |
| rs139886054 | 5 | 17234397 | A>G,T | 0 | intron_variant | BASP1 | 2e-11 | Tier 4: intronic/intergenic |
| rs187248060 | 7 | 82926086 | G>T | 0.001 | intron_variant | PCLO | 2e-11 | Tier 4: intronic/intergenic |
| rs566347593 | 16 | 54473981 | A>G | 0.001 | intergenic_variant | LINC02140 - LINC02183 | 2e-11 | Tier 4: intronic/intergenic |
| rs183986544 | 2 | 239034201 | C>T | 0.001 | intergenic_variant | LINC01940 - HDAC4 | 2e-11 | Tier 4: intronic/intergenic |
| rs570063769 | 6 | 149834947 | C>T | 0.001 | intron_variant | LRP11 | 3e-11 | Tier 4: intronic/intergenic |
| rs556131763 | 10 | 68298596 | G>A,T | 0 | intron_variant | PBLD | 4e-11 | Tier 4: intronic/intergenic |
| rs550191976 | 20 | 61711085 | A>G,T | 0 | intron_variant | CDH4 | 4e-11 | Tier 4: intronic/intergenic |
| rs182995751 | 17 | 49666679 | C>A | 0 | intron_variant | SPOP | 4e-11 | Tier 4: intronic/intergenic |
Genes & proteins
No associated-gene cohort resolved for this disease. Atlas builds the molecular and therapeutic sections — associated genes, protein families, druggability, pathways, interactions, and drug associations — by aggregating over a disease’s associated genes (resolved via GWAS / GenCC / ClinVar / CIViC), and none resolved here. This is expected for antibody-mediated, autoimmune, or otherwise non-gene-defined conditions; the curated evidence for this disease is its clinical features, GWAS susceptibility, and clinical trials (above).
Function
No pathway enrichment — requires an associated-gene cohort.
Therapeutics
No druggable-target or therapeutic data for this disease’s cohort.
Clinical trials & evidence
Clinical trials
Clinical trials: 13.
Phase distribution (across all retrieved trials)
| Phase | Trials |
|---|---|
| Not specified | 10 |
| PHASE2 | 2 |
| PHASE2/PHASE3 | 1 |
Top trials by phase / activity
| NCT | Phase | Status | Title |
|---|---|---|---|
| NCT01862926 | PHASE2/PHASE3 | COMPLETED | Rituximab Versus Cyclophosphamide in Connective Tissue Disease-ILD |
| NCT06672822 | PHASE2 | RECRUITING | Intralesional Injection of STS in Treatment of Calcinosis |
| NCT04988087 | PHASE2 | TERMINATED | A Study to Evaluate the Safety, Tolerability and Efficacy of MHV370 in Participants With Sjogren’s Syndrome (SjS) or Mixed Connective Tissue Disease (MCTD) |
| NCT03269630 | Not specified | RECRUITING | New Orleans Pulmonary Hypertension Biobank |
| NCT04402086 | Not specified | RECRUITING | Rheumatology Patient Registry and Biorepository |
| NCT05715463 | Not specified | ACTIVE_NOT_RECRUITING | Rheumatology-based Adaptive Intervention for Social Determinants and Health Equity |
| NCT07180537 | Not specified | RECRUITING | Creating Health Course Study for People With Rheumatological Conditions |
| NCT00522002 | Not specified | COMPLETED | CLUE Study: Connective Tissue Disease Leg Ulcer Etiology Study |
| NCT00582881 | Not specified | COMPLETED | Characteristics and Disease Progression of Mixed Connective Tissue Disease and Systemic Lupus Erythematosus |
| NCT01697254 | Not specified | COMPLETED | The CARRA Registry |
| NCT02494752 | Not specified | UNKNOWN | Role of Mesenchymal Stem Cells in Fat Grafting |
| NCT03430388 | Not specified | COMPLETED | Yellow Fever Vaccine in Patients With Rheumatic Diseases |
| NCT05961267 | Not specified | COMPLETED | Study of Gynecological Follow-up of Patients With Autoimmune Disease or Inflammatory Rheumatism |
Drugs tested across these trials (top 30)
| Molecule | Max phase | Trials referencing |
|---|---|---|
| CYCLOPHOSPHAMIDE ANHYDROUS | 4 | 1 |
| YELLOW FEVER VACCINE | 3 | 1 |
| MHV-370 | 2 | 1 |
Related Atlas pages
- Drugs: Cyclophosphamide, Yellow Fever Vaccine