Neuroendocrine neoplasm
diseaseOn this page
Also known as APUDomaneuroendocrine tumorneuroendocrine tumour
Summary
Neuroendocrine neoplasm (MONDO:0019496) is a cancer (an umbrella term covering 14 Mondo subtypes) with 4 cohort genes (19 GWAS associations across 4 studies; 3 CIViC-evidence somatic drivers; 5 ClinVar predisposition records) and 451 clinical trials. Molecularly, KDR Overexpression confers sensitivity to Pazopanib in Neuroendocrine Tumor (CIViC Level B); 3 further subtype–drug associations are mapped below. Top therapeutic interventions include lutetium oxodotreotide lu-177, lanreotide, and edotreotide gallium ga-68.
At a glance
- Classification: Cancer
- Prevalence: 1-5 / 10 000 (United States) [Orphanet-validated]
- Umbrella term: 14 Mondo subtypes
- Cohort genes: 4
- GWAS associations: 19
- ClinVar variants: 5
- Clinical trials: 451
- Precision-medicine evidence (CIViC): 4 subtype–drug associations
Clinical features
Epidemiology
Prevalence records
4 prevalence record(s), Orphanet:
| Type | Class | Value | Geography | Validation |
|---|---|---|---|---|
| Annual incidence | 1-9 / 100 000 | 2.53 | Europe | Validated |
| Annual incidence | 1-9 / 100 000 | 3.2 | Norway | Validated |
| Annual incidence | 1-9 / 100 000 | 5.25 | United States | Validated |
| Point prevalence | 1-5 / 10 000 | 35 | United States | Validated |
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | neuroendocrine neoplasm |
| Mondo ID | MONDO:0019496 |
| EFO | EFO:1001901 |
| MeSH | D018358 |
| Orphanet | 877 |
| DOID | DOID:169 |
| NCIT | C188218, C3809 |
| SNOMED CT | 255046005 |
| UMLS | C0206754 |
| MedGen | 64652 |
| GARD | 0009316 |
| Is cancer (heuristic) | yes |
Also known as: APUDoma · neuroendocrine neoplasm · neuroendocrine tumor · neuroendocrine tumour
Data availability: 5 ClinVar variants · 19 GWAS associations (4 studies).
Disease family
An umbrella term covering 14 Mondo subtypes.
Classification path: disease › human disease › disease by etiologic mechanism › cancer or benign tumor › neoplastic disease or syndrome › neoplasm › endocrine gland neoplasm › neuroendocrine neoplasm
Related subtypes (13): benign endocrine neoplasm, thymus neoplasm, granulosa cell tumor, thyroid tumor, pituitary tumor, familial tumoral calcinosis, malignant endocrine neoplasm, non-functioning endocrine neoplasm, functioning endocrine neoplasm, adrenal gland neoplasm, pineal body neoplasm, tumor of parathyroid gland, liver and intrahepatic bile duct neoplasm
Subtypes (14): paraganglioma, neuroendocrine carcinoma, prostate neuroendocrine neoplasm, ovarian neuroendocrine neoplasm, breast neuroendocrine neoplasm, carcinoid tumor, lung neuroendocrine neoplasm, laryngeal neuroendocrine neoplasm, middle ear neuroendocrine tumor, hereditary pheochromocytoma-paraganglioma, bronchial endocrine tumor, thymic neuroendocrine tumor, uterine corpus neuroendocrine neoplasm, digestive system neuroendocrine neoplasm
Genetics & variants
GWAS landscape
19 GWAS associations across 4 studies. Top hits map to 12 distinct genes (as reported by GWAS).
Top associations by p-value
| rsID | p-value | Gene | Risk allele | Odds ratio |
|---|---|---|---|---|
| rs543107477 | 2e-13 | MPP7 | T | 3.18 |
| rs183808807 | 2e-13 | T | 3.77 | |
| rs183587406 | 4e-13 | ITGB4 | C | 2.66 |
| rs551907375 | 9e-13 | ZCCHC24 | G | 3.4 |
| rs192865481 | 1e-12 | PPFIBP2 | C | 3.52 |
| rs530143739 | 2e-12 | ALPL | C | 3.32 |
| rs553574525 | 2e-12 | MCTP1 | A | 3.4 |
| rs555554410 | 3e-12 | PMM2P2 - MIX23P3 | T | 3.52 |
| rs528111636 | 4e-12 | GATD3 | C | 4.74 |
| rs184266990 | 1e-11 | LINC03062 | C | 2.96 |
| rs574144779 | 2e-11 | YTHDF1 - BIRC7 | T | 2.07 |
| rs535673445 | 2e-11 | SLC35F3 | G | 3.01 |
| rs140800961 | 2e-11 | EXOC5P1 - LARP1BP1 | C | 4.01 |
| rs28405676 | 2e-11 | MIR4289 - PCNPP2 | C | 2.78 |
| rs192006671 | 3e-11 | RNU6-1120P - KCNMB2 | T | 3.62 |
| rs542929735 | 3e-11 | GCNT2 | G | 2.87 |
| rs183021871 | 3e-11 | SGPL1 | C | 3.51 |
| rs551382130 | 4e-11 | IGLL1 - DRICH1 | G | 3.52 |
| rs188416553 | 4e-11 | ALDH18A1 | C | 2.74 |
Top studies (by case count)
| Study | Lead author | Year | Cases | Controls | Title |
|---|---|---|---|---|---|
| GCST003785 | Du Y | 2016 | 832 | 4,542 | Genetic associations with neuroendocrine tumor risk: results from a genome-wide association study. |
| GCST90477252 | Verma A | 2024 | 540 | 450,490 | Diversity and scale: Genetic architecture of 2068 traits in the VA Million Veteran Program. |
| GCST90479836 | Verma A | 2024 | 211 | 121,601 | Diversity and scale: Genetic architecture of 2068 traits in the VA Million Veteran Program. |
| GCST90481549 | Verma A | 2024 | 211 | 121,601 | Diversity and scale: Genetic architecture of 2068 traits in the VA Million Veteran Program. |
Variant details and genetic-evidence tiers
Tier distribution (top 50 variants)
| Tier | Variants |
|---|---|
| Tier 1: coding | 0 |
| Tier 2: splice/UTR | 1 |
| Tier 3: regulatory | 0 |
| Tier 4: intronic/intergenic | 18 |
MAF distribution
| Bucket | Variants |
|---|---|
| common (>=0.05) | 0 |
| low_freq (0.01-0.05) | 0 |
| rare (<0.01) | 19 |
| unknown | 0 |
Functional consequences
| Consequence | Count |
|---|---|
| intron_variant | 13 |
| intergenic_variant | 4 |
| 3_prime_UTR_variant | 1 |
| non_coding_transcript_exon_variant | 1 |
Top variants
| rsID | Chr | Pos | Alleles | MAF | Consequence | Gene | p-value | Tier |
|---|---|---|---|---|---|---|---|---|
| rs543107477 | 10 | 28051359 | T>G | 0 | 3_prime_UTR_variant | MPP7 | 2e-13 | Tier 2: splice/UTR |
| rs183808807 | 16 | 72644283 | T>A | 0 | intron_variant | 2e-13 | Tier 4: intronic/intergenic | |
| rs183587406 | 17 | 75744841 | C>T | 0.001 | intron_variant | ITGB4 | 4e-13 | Tier 4: intronic/intergenic |
| rs551907375 | 10 | 79433550 | G>A | 0 | intron_variant | ZCCHC24 | 9e-13 | Tier 4: intronic/intergenic |
| rs192865481 | 11 | 7632531 | C>T | 0.001 | intron_variant | PPFIBP2 | 1e-12 | Tier 4: intronic/intergenic |
| rs530143739 | 1 | 21526208 | C>T | 0 | intron_variant | ALPL | 2e-12 | Tier 4: intronic/intergenic |
| rs553574525 | 5 | 94910152 | A>G | 0 | intron_variant | MCTP1 | 2e-12 | Tier 4: intronic/intergenic |
| rs555554410 | 18 | 12196285 | T>A | 0 | intergenic_variant | PMM2P2 - MIX23P3 | 3e-12 | Tier 4: intronic/intergenic |
| rs528111636 | 21 | 44140704 | C>T | 0.001 | intron_variant | GATD3 | 4e-12 | Tier 4: intronic/intergenic |
| rs184266990 | 9 | 89725906 | C>A,T | 0.002 | intron_variant | LINC03062 | 1e-11 | Tier 4: intronic/intergenic |
| rs574144779 | 20 | 63225867 | T>C,G | 0.002 | intergenic_variant | YTHDF1 - BIRC7 | 2e-11 | Tier 4: intronic/intergenic |
| rs535673445 | 1 | 234077777 | G>A | 0.001 | intron_variant | SLC35F3 | 2e-11 | Tier 4: intronic/intergenic |
| rs140800961 | 4 | 62838520 | C>A,G,T | 0.001 | intergenic_variant | EXOC5P1 - LARP1BP1 | 2e-11 | Tier 4: intronic/intergenic |
| rs28405676 | 9 | 88778857 | C>A,T | 0.003 | intron_variant | MIR4289 - PCNPP2 | 2e-11 | Tier 4: intronic/intergenic |
| rs192006671 | 3 | 178036943 | T>C | 0 | intron_variant | RNU6-1120P - KCNMB2 | 3e-11 | Tier 4: intronic/intergenic |
| rs542929735 | 6 | 10599162 | G>C | 0 | intron_variant | GCNT2 | 3e-11 | Tier 4: intronic/intergenic |
| rs183021871 | 10 | 70913047 | C>G | 0.001 | intergenic_variant | SGPL1 | 3e-11 | Tier 4: intronic/intergenic |
| rs551382130 | 22 | 23607113 | G>A,C | 0 | non_coding_transcript_exon_variant | IGLL1 - DRICH1 | 4e-11 | Tier 4: intronic/intergenic |
| rs188416553 | 10 | 95630770 | C>T | 0.001 | intron_variant | ALDH18A1 | 4e-11 | Tier 4: intronic/intergenic |
ClinVar germline variants
5 retrieved; paginated sample, class counts are floors:
2 likely pathogenic, 1 conflicting classifications of pathogenicity; other, 1 pathogenic, 1 conflicting classifications of pathogenicity; other; risk factor
| ClinVar | Variant (HGVS) | Gene | Classification | Review |
|---|---|---|---|---|
| 157519 | NM_004064.5(CDKN1B):c.279_280insT (p.Pro94fs) | CDKN1B | Pathogenic | criteria provided, single submitter |
| 157518 | NM_004064.5(CDKN1B):c.127delinsTAA (p.Arg43Ter) | CDKN1B | Likely pathogenic | no assertion criteria provided |
| 157520 | NM_004064.5(CDKN1B):c.334del (p.Ser112fs) | CDKN1B | Likely pathogenic | no assertion criteria provided |
| 10 | NM_000410.4(HFE):c.187C>G (p.His63Asp) | HFE | Conflicting classifications of pathogenicity; other | criteria provided, conflicting classifications |
| 9 | NM_000410.4(HFE):c.845G>A (p.Cys282Tyr) | HFE | Conflicting classifications of pathogenicity; other; risk factor | criteria provided, conflicting classifications |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 0 · Orphanet: 10 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
Somatic driver evidence (intOGen + CIViC, cohort fanout)
| Gene | intOGen role | Cancer types | CIViC |
|---|---|---|---|
| SSTR5 | CIViC #5499 | ||
| MGMT | CIViC #34 | ||
| CDKN1B | LoF | BRCA,HCC,PCM,PRAD,SIC | CIViC #914 |
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|---|---|
| MGMT | Orphanet:251576 | Gliosarcoma |
| MGMT | Orphanet:251579 | Giant cell glioblastoma |
| MGMT | Orphanet:618 | Familial melanoma |
| CDKN1B | Orphanet:276152 | Multiple endocrine neoplasia type 4 |
| CDKN1B | Orphanet:652 | Multiple endocrine neoplasia type 1 |
| HFE | Orphanet:443057 | Sporadic porphyria cutanea tarda |
| HFE | Orphanet:443062 | Familial porphyria cutanea tarda |
| HFE | Orphanet:465508 | Symptomatic form of HFE-related hemochromatosis |
| HFE | Orphanet:586 | Cystic fibrosis |
| HFE | Orphanet:648581 | Digenic hemochromatosis |
Cohort genes → proteins
4 cohort genes, 4 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|---|
| civic_only | 2 |
| multi_evidence | 2 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|---|---|---|---|---|
| SSTR5 | HGNC:11334 | ENSG00000162009 | P35346 | Somatostatin receptor type 5 | civic_evidence |
| MGMT | HGNC:7059 | ENSG00000170430 | P16455 | Methylated-DNA–protein-cysteine methyltransferase | civic_evidence |
| CDKN1B | HGNC:1785 | ENSG00000111276 | P46527 | Cyclin-dependent kinase inhibitor 1B | clinvar |
| HFE | HGNC:4886 | ENSG00000010704 | Q30201 | Hereditary hemochromatosis protein | clinvar |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|---|---|
| SSTR5 | Somatostatin receptor type 5 | Receptor for somatostatin 28 and to a lesser extent for somatostatin-14. |
| MGMT | Methylated-DNA–protein-cysteine methyltransferase | Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. |
| CDKN1B | Cyclin-dependent kinase inhibitor 1B | Important regulator of cell cycle progression. |
| HFE | Hereditary hemochromatosis protein | Binds to transferrin receptor (TFR) and reduces its affinity for iron-loaded transferrin. |
Protein-family classification
Druggable: 3 · Difficult: 0 · Unknown: 1 · Druggable fraction: 0.75
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|---|---|---|
| Antibody/Immunoglobulin | 1 | 7.3× | 0.314 |
| GPCR | 1 | 6.0× | 0.314 |
| Enzyme (other) | 1 | 3.0× | 0.392 |
| Other/Unknown | 1 | 0.5× | 0.962 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|---|---|---|---|
| SSTR5 | GPCR | yes | GPCR_Rhodpsn, Somatstn_rcpt, Somatstn_rcpt_5 | |
| MGMT | Enzyme (other) | yes | 2.1.1.63 | MethylDNA_cys_MeTrfase_AS, MethylG_MeTrfase_N, MethylDNA_cys_MeTrfase_DNA-bd |
| CDKN1B | Other/Unknown | no | CDI_dom, CDI_dom_sf | |
| HFE | Antibody/Immunoglobulin | yes | MHC_I_a_a1/a2, Ig/MHC_CS, Ig_C1-set |
Expression context
Cohort genes with no expression data: 0.
3 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 0 |
| broad (>20) | 4 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|---|
| cardiac atrium | 1 |
| right atrium auricular region | 1 |
| tendon of biceps brachii | 1 |
| endometrium epithelium | 1 |
| liver | 1 |
| right lobe of liver | 1 |
| pigmented layer of retina | 1 |
| retina | 1 |
| ventricular zone | 1 |
| olfactory bulb | 1 |
| stromal cell of endometrium | 1 |
| type B pancreatic cell | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|---|---|---|---|
| SSTR5 | 75 | tissue_specific | yes | tendon of biceps brachii, right atrium auricular region, cardiac atrium |
| MGMT | 261 | ubiquitous | marker | right lobe of liver, liver, endometrium epithelium |
| CDKN1B | 301 | ubiquitous | marker | pigmented layer of retina, retina, ventricular zone |
| HFE | 238 | ubiquitous | marker | type B pancreatic cell, olfactory bulb, stromal cell of endometrium |
Protein interactions among cohort
Intra-cohort edges: 0.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|---|
| CDKN1B | 4,635 |
| MGMT | 2,853 |
| HFE | 1,569 |
| SSTR5 | 156 |
Structural data
PDB: 4 · AlphaFold-only: 0 · No structure: 0
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|---|---|
| MGMT | P16455 | 23 |
| CDKN1B | P46527 | 19 |
| SSTR5 | P35346 | 7 |
| HFE | Q30201 | 2 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 63. Enrichment computed across 4 evidence-associated genes (4 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 4 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| MGMT-mediated DNA damage reversal | 1 | 2855.0× | 0.022 | MGMT |
| PTK6 Regulates Cell Cycle | 1 | 475.8× | 0.031 | CDKN1B |
| DNA Damage Reversal | 1 | 407.9× | 0.031 | MGMT |
| Aberrant regulation of mitotic G1/S transition in cancer due to RB1 defects | 1 | 219.6× | 0.031 | CDKN1B |
| AKT phosphorylates targets in the cytosol | 1 | 203.9× | 0.031 | CDKN1B |
| TP53 Regulates Transcription of Genes Involved in G1 Cell Cycle Arrest | 1 | 178.4× | 0.031 | CDKN1B |
| p53-Dependent G1 DNA Damage Response | 1 | 178.4× | 0.031 | CDKN1B |
| p53-Dependent G1/S DNA damage checkpoint | 1 | 178.4× | 0.031 | CDKN1B |
| G1/S DNA Damage Checkpoints | 1 | 167.9× | 0.031 | CDKN1B |
| FOXO-mediated transcription of cell cycle genes | 1 | 167.9× | 0.031 | CDKN1B |
| Defective binding of RB1 mutants to E2F1,(E2F2, E2F3) | 1 | 158.6× | 0.031 | CDKN1B |
| RHO GTPases activate CIT | 1 | 150.3× | 0.031 | CDKN1B |
| TP53 Regulates Transcription of Cell Cycle Genes | 1 | 135.9× | 0.031 | CDKN1B |
| Signaling by PTK6 | 1 | 135.9× | 0.031 | CDKN1B |
| Signaling by Non-Receptor Tyrosine Kinases | 1 | 135.9× | 0.031 | CDKN1B |
| Estrogen-dependent nuclear events downstream of ESR-membrane signaling | 1 | 109.8× | 0.031 | CDKN1B |
| Constitutive Signaling by AKT1 E17K in Cancer | 1 | 105.7× | 0.031 | CDKN1B |
| Aberrant regulation of mitotic cell cycle due to RB1 defects | 1 | 102.0× | 0.031 | CDKN1B |
| G1 Phase | 1 | 98.5× | 0.031 | CDKN1B |
| Diseases of mitotic cell cycle | 1 | 98.5× | 0.031 | CDKN1B |
| PI3K/AKT Signaling in Cancer | 1 | 92.1× | 0.031 | CDKN1B |
| Transferrin endocytosis and recycling | 1 | 92.1× | 0.031 | HFE |
| FLT3 Signaling | 1 | 86.5× | 0.031 | CDKN1B |
| FOXO-mediated transcription | 1 | 84.0× | 0.031 | CDKN1B |
| Cyclin E associated events during G1/S transition | 1 | 71.4× | 0.035 | CDKN1B |
| Cyclin A:Cdk2-associated events at S phase entry | 1 | 66.4× | 0.036 | CDKN1B |
| G1/S Transition | 1 | 58.3× | 0.038 | CDKN1B |
| Cyclin D associated events in G1 | 1 | 58.3× | 0.038 | CDKN1B |
| SCF(Skp2)-mediated degradation of p27/p21 | 1 | 51.9× | 0.042 | CDKN1B |
| Mitotic G1 phase and G1/S transition | 1 | 46.0× | 0.044 | CDKN1B |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 4 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| negative regulation of antigen processing and presentation of endogenous peptide antigen via MHC class I | 1 | 4213.0× | 0.008 | HFE |
| regulation of iron ion transport | 1 | 2106.5× | 0.008 | HFE |
| regulation of lens fiber cell differentiation | 1 | 2106.5× | 0.008 | CDKN1B |
| negative regulation of cardiac muscle tissue regeneration | 1 | 2106.5× | 0.008 | CDKN1B |
| response to iron ion starvation | 1 | 1404.3× | 0.010 | HFE |
| negative regulation of CD8-positive, alpha-beta T cell activation | 1 | 1053.2× | 0.010 | HFE |
| autophagic cell death | 1 | 842.6× | 0.010 | CDKN1B |
| negative regulation of epithelial cell proliferation involved in prostate gland development | 1 | 702.2× | 0.010 | CDKN1B |
| negative regulation of T cell cytokine production | 1 | 601.9× | 0.010 | HFE |
| cellular response to antibiotic | 1 | 601.9× | 0.010 | CDKN1B |
| cellular response to iron ion | 1 | 601.9× | 0.010 | HFE |
| epithelial cell proliferation involved in prostate gland development | 1 | 526.6× | 0.010 | CDKN1B |
| regulation of protein localization to cell surface | 1 | 421.3× | 0.010 | HFE |
| DNA alkylation repair | 1 | 383.0× | 0.010 | MGMT |
| transferrin transport | 1 | 383.0× | 0.010 | HFE |
| urate metabolic process | 1 | 383.0× | 0.010 | HFE |
| nuclear export | 1 | 383.0× | 0.010 | CDKN1B |
| positive regulation of peptide hormone secretion | 1 | 383.0× | 0.010 | HFE |
| regulation of cell cycle G1/S phase transition | 1 | 383.0× | 0.010 | CDKN1B |
| hormone biosynthetic process | 1 | 351.1× | 0.010 | HFE |
| regulation of exit from mitosis | 1 | 300.9× | 0.010 | CDKN1B |
| negative regulation of epithelial cell apoptotic process | 1 | 300.9× | 0.010 | CDKN1B |
| negative regulation of cell population proliferation | 2 | 21.1× | 0.010 | SSTR5, CDKN1B |
| cellular response to lithium ion | 1 | 280.9× | 0.010 | CDKN1B |
| response to iron ion | 1 | 234.1× | 0.012 | HFE |
| epithelial cell apoptotic process | 1 | 210.7× | 0.012 | CDKN1B |
| negative regulation of ubiquitin-dependent protein catabolic process | 1 | 210.7× | 0.012 | HFE |
| negative regulation of mitotic cell cycle | 1 | 200.6× | 0.012 | CDKN1B |
| positive regulation of receptor-mediated endocytosis | 1 | 200.6× | 0.012 | HFE |
| regulation of cyclin-dependent protein serine/threonine kinase activity | 1 | 183.2× | 0.013 | CDKN1B |
Therapeutics
Drugs indicated for this disease
3 approved, 7 in late-stage (phase 3) trials. Disease-direct ChEMBL indications, not inferred from the associated-gene cohort below.
| Drug | Development status |
|---|---|
| Avelumab | Approved (phase 4) |
| Everolimus | Approved (phase 4) |
| Sunitinib | Approved (phase 4) |
| Capecitabine | Phase 3 (in late-stage trials) |
| Edotreotide | Phase 3 (in late-stage trials) |
| Fluorouracil | Phase 3 (in late-stage trials) |
| Guanidine | Phase 3 (in late-stage trials) |
| Octreotide | Phase 3 (in late-stage trials) |
| Streptozocin | Phase 3 (in late-stage trials) |
| Surufatinib | Phase 3 (in late-stage trials) |
Earlier-phase candidates (phase 2, investigational — efficacy not yet established): Alectinib, Bevacizumab, Cabozantinib, Dacarbazine, Dordaviprone, Doxorubicin, Entinostat, Erlotinib, Fosbretabulin, Interferon Alfa, Ipilimumab, Lanreotide, Lenvatinib, Lithium Carbonate, Metformin, Nintedanib, Nivolumab, Novaferon, Oxaliplatin, Panobinostat, Pasireotide, Patupilone, Pazopanib, Pembrolizumab, Pemetrexed, Pentetreotide, Retifanlimab, Ribociclib, Sintilimab, Sorafenib, Tamoxifen, Tegafur, Telotristat, Telotristat Ethyl, Temozolomide, Tetraxetan, Thalidomide, Triapine, Vatalanib.
Drug target analysis
Approved (phase 4): 1 · Phase ≥3: 2 · Phased (≥1): 2 · Undrugged: 2
Druggability breadth: 3 of 4 evidence-associated genes (75%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Genes with an approved drug
The molecule shown is one approved compound that hits the gene — not necessarily a drug of choice or one indicated for this disease.
| Symbol | Example approved molecule |
|---|---|
| SSTR5 | LANREOTIDE |
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|---|---|
| SSTR5 | 11 | 4 |
| MGMT | 2 | 3 |
| CDKN1B | 0 | 0 |
| HFE | 0 | 0 |
Drugs targeting cohort genes (top 30)
| Molecule | Max phase | Targets in cohort |
|---|---|---|
| LANREOTIDE | 4 | SSTR5 |
| OCTREOTIDE | 4 | SSTR5 |
| GALLIUM OXODOTREOTIDE | 4 | SSTR5 |
| ASTEMIZOLE | 4 | SSTR5 |
| PASIREOTIDE | 4 | SSTR5 |
| LOPERAMIDE | 4 | SSTR5 |
| SOMATOSTATIN | 3 | SSTR5 |
| VAPREOTIDE | 3 | SSTR5 |
| EDOTREOTIDE | 3 | SSTR5 |
| 6-O-BENZYLGUANINE | 3 | MGMT |
| SEGLITIDE | 2 | SSTR5 |
| EDOTREOTIDE YTTRIUM | 2 | SSTR5 |
| LOMEGUATRIB | 2 | MGMT |
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 1.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|---|---|
| SSTR5 | 151 | Binding:123, Functional:24, ADMET:4 |
| MGMT | 86 | Binding:84, ADMET:2 |
| CDKN1B | 5 | Binding:5 |
Cohort enzymes (BRENDA EC)
| Symbol | EC numbers | Names |
|---|---|---|
| MGMT | 2.1.1.63 | methylated-DNA-[protein]-cysteine S-methyltransferase |
Cohort genes with high screening signal
≥100 ChEMBL assays — a studied-ness signal; see Therapeutics for approved-drug status.
| Symbol | ChEMBL assays |
|---|---|
| SSTR5 | 151 |
Pharmacogenomics
Cohort genes with a PharmGKB record: 4; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Drug repurposing candidates
10 approved/phased drugs hit cohort targets but don’t yet appear in disease-level clinical trials. Target-inhibition rationale is strongest for cancer driver genes; a bioactivity hit is a screening signal, not a treatment claim.
| Compound | Max phase | Cohort target (bioactivity) |
|---|---|---|
| GALLIUM OXODOTREOTIDE | 4 | SSTR5 |
| ASTEMIZOLE | 4 | SSTR5 |
| LOPERAMIDE | 4 | SSTR5 |
| SOMATOSTATIN | 3 | SSTR5 |
| VAPREOTIDE | 3 | SSTR5 |
| EDOTREOTIDE | 3 | SSTR5 |
| 6-O-BENZYLGUANINE | 3 | MGMT |
| SEGLITIDE | 2 | SSTR5 |
| EDOTREOTIDE YTTRIUM | 2 | SSTR5 |
| LOMEGUATRIB | 2 | MGMT |
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|---|---|---|
| A | Approved (phase 4 drug) | 1 | SSTR5 |
| B | Phased (≥1) drug, not yet approved | 1 | MGMT |
| C | Druggable family + PDB, no drug | 1 | HFE |
| D | Druggable family + AlphaFold only, no drug | 0 | |
| E | Difficult family or no structure, no drug | 1 | CDKN1B |
Undrugged target profiles
2 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
| Symbol | ChEMBL assays | Drugged partners (top 3) |
|---|---|---|
| CDKN1B | 5 | — |
| HFE | 0 | — |
Clinical trials & evidence
Clinical trials
Clinical trials: 451.
Phase distribution (across all retrieved trials)
| Phase | Trials |
|---|---|
| Not specified | 163 |
| PHASE2 | 143 |
| PHASE1 | 52 |
| PHASE1/PHASE2 | 36 |
| PHASE3 | 25 |
| EARLY_PHASE1 | 16 |
| PHASE4 | 9 |
| PHASE2/PHASE3 | 7 |
Top trials by phase / activity
| NCT | Phase | Status | Title |
|---|---|---|---|
| NCT06485739 | PHASE4 | NOT_YET_RECRUITING | Irinotecan Liposomes for the Treatment of Neuroendocrine Carcinoma |
| NCT07272512 | PHASE4 | RECRUITING | Prospective Multicenter Real-world Study of Surufatinib in Patients With Advanced Neuroendocrine Neoplasms |
| NCT01317615 | PHASE4 | COMPLETED | RAD001 With Paclitaxel and Carboplatin in First Line Treatment of Patients With Advanced Large Cell Lung Cancer With Neuroendocrine Differentiation |
| NCT01595009 | PHASE4 | COMPLETED | An Open-label, Multi-center, Expanded Access Study of Everolimus in Participants With Advanced Neuroendocrine Tumors (NETs) (Core Study) and an Extension Study to the Open-label, Multi-center, Expanded Access Study of Everolimus in Patients With Advanced NETs (E1) |
| NCT01794793 | PHASE4 | COMPLETED | Study to Allow Access to Pasireotide for Patients Benefiting From Pasireotide Treatment in Novartis-sponsored Studies |
| NCT02075606 | PHASE4 | COMPLETED | Circulating Tumour Cells in Somatuline Autogel Treated NeuroEndocrine Tumours Patients |
| NCT03083210 | PHASE4 | UNKNOWN | Study of Lanreotide in Metastatic or Recurrent Grade I-II Hindgut NET |
| NCT03289741 | PHASE4 | COMPLETED | A Study to Evaluate Patient Experience in the Therapy of Neuroendocrine Tumors Treated With Octreotide Long Acting Release Versus Lanreotide |
| NCT04140409 | PHASE4 | TERMINATED | Sandostatin (Octreotide LAR) May Lead to Clinical Improvement Through Receptor Occupation Optimisation |
| NCT00569127 | PHASE3 | ACTIVE_NOT_RECRUITING | Octreotide Acetate and Recombinant Interferon Alfa-2b or Bevacizumab in Treating Patients With Metastatic or Locally Advanced, High-Risk Neuroendocrine Tumor |
| NCT03049189 | PHASE3 | ACTIVE_NOT_RECRUITING | Efficacy and Safety of 177Lu-edotreotide PRRT in GEP-NET Patients |
| NCT03375320 | PHASE3 | ACTIVE_NOT_RECRUITING | Testing Cabozantinib in Patients With Advanced Pancreatic Neuroendocrine and Carcinoid Tumors |
| NCT04706910 | PHASE3 | RECRUITING | 18F-DOPA II - PET Imaging Optimization |
| NCT04810091 | PHASE3 | ACTIVE_NOT_RECRUITING | Telotristat Ethyl for the Treatment of Carcinoid Heart Disease in Patients With Metastatic Neuroendocrine Tumor |
| NCT04847505 | PHASE3 | RECRUITING | 68Ga-DOTA-TATE PET/CT Imaging in NETs |
| NCT04919226 | PHASE3 | ACTIVE_NOT_RECRUITING | Lutetium 177Lu-Edotreotide Versus Best Standard of Care in Well-differentiated Aggressive Grade-2 and Grade-3 GastroEnteroPancreatic NeuroEndocrine Tumors (GEP-NETs) - COMPOSE |
| NCT05387603 | PHASE3 | RECRUITING | Systemic Targeted Adaptive RadioTherapy of NeuroEndocrine Tumors. |
| NCT05459844 | PHASE3 | ACTIVE_NOT_RECRUITING | A Study Comparing Treatment With Lutetium[177Lu] Oxodotreotide Injection to Octreotide LAR in Patients With GEP-NETs |
| NCT05477576 | PHASE3 | RECRUITING | Study of RYZ101 Compared With SOC in Pts w Inoperable SSTR+ Well-differentiated GEP-NET That Has Progressed Following 177Lu-SSA Therapy |
| NCT05918302 | PHASE3 | RECRUITING | Efficacy and Safety of Radiotherapy Compared to Everolimus in Somatostatin Receptor Positive Neuroendocrine Tumors of the Lung and Thymus. |
| NCT06398444 | PHASE2/PHASE3 | ACTIVE_NOT_RECRUITING | A Clinical Study of Lutetium[177Lu] Oxodotreotide Injection in Patients With Advanced Neuroendocrine Neoplasms |
| NCT06855095 | PHASE2/PHASE3 | RECRUITING | Absorbed Tumor Dose in Peptide Receptor Radionuclide Therapy with Long-acting Somatostatin Analogues - ATSA Trial |
| NCT00037869 | PHASE3 | COMPLETED | High Dose I-131 Metaiodobenzylguanidine(MIBG) for Metastatic Neuroendocrine Tumors |
| NCT00171873 | PHASE3 | COMPLETED | Antiproliferative Effect of Octreotide in Patients With Metastasized Neuroendocrine Tumors of the Midgut |
| NCT00227136 | PHASE3 | TERMINATED | Effect of Oral 5-HTP Intake on Urinary 5-HIAA Excretion |
| NCT00227617 | PHASE2/PHASE3 | TERMINATED | Combination Chemotherapy and Bevacizumab in Treating Patients With Advanced Neuroendocrine Tumors |
| NCT00442533 | PHASE2/PHASE3 | COMPLETED | Safety and Efficacy Study of In-111 Pentetreotide to Treat Neuroendocrine Tumors |
| NCT01524783 | PHASE3 | COMPLETED | Everolimus Plus Best Supportive Care vs Placebo Plus Best Supportive Care in the Treatment of Patients With Advanced Neuroendocrine Tumors (GI or Lung Origin) |
| NCT01578239 | PHASE3 | COMPLETED | A Study Comparing Treatment With 177Lu-DOTA0-Tyr3-Octreotate to Octreotide LAR in Patients With Inoperable, Progressive, Somatostatin Receptor Positive Midgut Carcinoid Tumours |
| NCT01744249 | PHASE2/PHASE3 | COMPLETED | Sandostatin LAR and Axitinib vs Pbo in Pnts With Advanced Well-differentiated Non-pancreatic Neuroendocrine Carcinomas |
| NCT01755182 | PHASE3 | TERMINATED | Systemic Therapy With or Without Upfront Transarterial Embolization for Inoperable Liver Metastasis of Neuroendocrine Tumors |
| NCT02246127 | PHASE3 | COMPLETED | Sequentiality of Everolimus and STZ-5FU in Advanced Pancreatic Neuroendocrine Tumor |
| NCT02588170 | PHASE3 | COMPLETED | Phase III Study of Surufatinib in Treating Advanced Extrapancreatic Neuroendocrine Tumors |
| NCT02589821 | PHASE3 | COMPLETED | Phase III Study of Surufatinib in Treating Advanced Pancreatic Neuroendocrine Tumors |
| NCT02840149 | PHASE3 | COMPLETED | SUV on 68Ga-DOTATATE PET/CT and Ki-67 Index in Neuro-Endocrine Tumors |
| NCT03042416 | PHASE3 | COMPLETED | 18F-DOPA PET Imaging: an Evaluation of Biodistribution and Safety |
| NCT03136328 | PHASE3 | COMPLETED | Diagnosis and Staging of Neuroendocrine Tumors (NETs) Utilizing 68Ga-DOTATOC PET/CT Scan |
| NCT03590119 | PHASE2/PHASE3 | COMPLETED | Intra-arterial Lutetium-177-dotatate for Treatment of Patients With Neuro-endocrine Tumor Liver Metastases |
| NCT03673943 | PHASE3 | COMPLETED | Imaging of Patients With Known or Suspected Somatostatin Receptor Positive Neuroendocrine Tumors Using Cu64-DOTATATE |
| NCT04552847 | PHASE2/PHASE3 | COMPLETED | Al18F-NOTA-octreotide PET Imaging in Neuroendocrine Tumors |
Drugs tested across these trials (top 30)
| Molecule | Max phase | Trials referencing |
|---|---|---|
| LUTETIUM OXODOTREOTIDE LU-177 | 4 | 16 |
| LANREOTIDE | 4 | 15 |
| EDOTREOTIDE GALLIUM GA-68 | 4 | 13 |
| OCTREOTIDE | 4 | 8 |
| TELOTRISTAT ETHYL | 4 | 8 |
| CARBOPLATIN | 4 | 7 |
| SUNITINIB | 4 | 5 |
| CABOZANTINIB | 4 | 4 |
| PASIREOTIDE | 4 | 4 |
| COPPER OXODOTREOTIDE CU-64 | 4 | 3 |
| EVEROLIMUS | 4 | 2 |
| FLUORODOPA F 18 | 4 | 2 |
| FLUPHENAZINE DECANOATE | 4 | 2 |
| INDIUM IN 111 PENTETREOTIDE | 4 | 2 |
| IOBENGUANE I 131 | 4 | 2 |
| LENVATINIB | 4 | 2 |
| LURBINECTEDIN | 4 | 2 |
| AXITINIB | 4 | 1 |
| BEVACIZUMAB | 4 | 1 |
| CABERGOLINE | 4 | 1 |
| DESIPRAMINE HYDROCHLORIDE | 4 | 1 |
| ENTRECTINIB | 4 | 1 |
| FUROSEMIDE | 4 | 1 |
| LEUCOVORIN | 4 | 1 |
| LITHIUM CARBONATE | 4 | 1 |
| NINTEDANIB | 4 | 1 |
| OXALIPLATIN | 4 | 1 |
| PACLITAXEL | 4 | 1 |
| PANOBINOSTAT | 4 | 1 |
| PAZOPANIB | 4 | 1 |
Precision-medicine subtype map (CIViC)
Drug × molecular subtype: 4 predictive associations from 4 curated evidence items.
| Molecular subtype | Therapy | Effect | Level | CIViC |
|---|---|---|---|---|
| KDR Overexpression | Pazopanib | Sensitivity/Response | CIViC B | EID7854 |
| MGMT Underexpression | Temozolomide | Sensitivity/Response | CIViC B | EID2904 |
| SSTR5 Overexpression | Pasireotide | Sensitivity/Response | CIViC B | EID10193 |
| MEN1 Loss-of-function | JQ1 | Sensitivity/Response | CIViC D | EID9249 |
Related Atlas pages
- Cohort genes: SSTR5, MGMT, CDKN1B, HFE
- Drugs: LUTETIUM OXODOTREOTIDE LU-177, Lanreotide, EDOTREOTIDE GALLIUM GA-68, Octreotide, Telotristat Ethyl, Carboplatin, Sunitinib, Cabozantinib, Pasireotide, COPPER OXODOTREOTIDE CU-64, Everolimus, FLUORODOPA F 18, Fluphenazine Decanoate, INDIUM IN 111 PENTETREOTIDE, IOBENGUANE I 131, Lenvatinib, Lurbinectedin, Axitinib, Bevacizumab, Cabergoline, Desipramine, Entrectinib, Furosemide, Lithium Carbonate, Nintedanib, Oxaliplatin, Paclitaxel, Panobinostat, Pazopanib, Temozolomide