non-Hodgkin lymphoma
diseaseOn this page
Also known as NHLnon-Hodgkin's lymphomanon-Hodgkin's lymphoma (NHL)non-Hodgkins lymphoma
Summary
non-Hodgkin lymphoma (MONDO:0018908) is a cancer (an umbrella term covering 10 Mondo subtypes) with 8 cohort genes (92 GWAS associations across 31 studies; 5 CIViC-evidence somatic drivers; 13 ClinVar predisposition records) and 1,051 clinical trials. Molecularly, EZH2 Y646F confers sensitivity to Tazemetostat in Non-Hodgkin Lymphoma (CIViC Level D). Top therapeutic interventions include rituximab, bendamustine, and plerixafor.
At a glance
- Classification: Cancer
- Prevalence: 1-5 / 10 000 (Europe) [Orphanet-validated]
- Umbrella term: 10 Mondo subtypes
- Cohort genes: 8
- GWAS associations: 92
- ClinVar variants: 13
- Clinical trials: 1,051
- Precision-medicine evidence (CIViC): 1 subtype–drug association
Clinical features
Epidemiology
Prevalence records
2 prevalence record(s), Orphanet:
| Type | Class | Value | Geography | Validation |
|---|---|---|---|---|
| Annual incidence | 1-5 / 10 000 | 11.6 | Europe | Validated |
| Point prevalence | 1-5 / 10 000 | Europe | Not yet validated |
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | non-Hodgkin lymphoma |
| Mondo ID | MONDO:0018908 |
| EFO | EFO:0005952 |
| MeSH | D008228 |
| Orphanet | 547 |
| DOID | DOID:0060060 |
| NCIT | C3211 |
| UMLS | C0024305 |
| MedGen | 6160 |
| MedDRA | 10029547 |
| Is cancer (heuristic) | yes |
Also known as: NHL · non-Hodgkin lymphoma · non-Hodgkin’s lymphoma · non-Hodgkin’s lymphoma (NHL) · non-Hodgkins lymphoma
Data availability: 13 ClinVar variants · 92 GWAS associations (31 studies) · 14 cell lines · 55 intOGen driver records.
Disease family
An umbrella term covering 10 Mondo subtypes.
Classification path: disease › human disease › disease by etiologic mechanism › cancer or benign tumor › neoplastic disease or syndrome › neoplasm › hematopoietic and lymphoid system neoplasm › hematopoietic and lymphoid cell neoplasm › lymphoid neoplasm › lymphoma › non-Hodgkin lymphoma
Related subtypes (26): prostate lymphoma, nasal cavity lymphoma, bladder lymphoma, tracheal lymphoma, retroperitoneal lymphoma, ureteral lymphoma, ovarian lymphoma, B-cell lymphoma, unclassifiable, with features intermediate between diffuse large b-cell lymphoma and classical Hodgkin lymphoma, pediatric lymphoma, adult lymphoma, breast lymphoma, heart lymphoma, chest wall lymphoma, lung lymphoma, mediastinal malignant lymphoma, eye lymphoma, B-cell neoplasm, gastrointestinal lymphoma, Hodgkins lymphoma, peripheral T-cell lymphoma, not otherwise specified, composite lymphoma, AIDS-related primary central nervous system lymphoma, primary organ-specific lymphoma, extranodal nasal NK/T cell lymphoma, methotrexate-associated lymphoproliferative disorders, progressive transformation of germinal centers
Subtypes (10): lymphoblastic lymphoma, lymphosarcoma, acute lymphoblastic leukemia, lymphoma, non-Hodgkin, familial, B-cell non-Hodgkin lymphoma, T-cell non-Hodgkin lymphoma, lung non-Hodgkin lymphoma, ocular adnexal lymphoma, large-cell immunoblastic lymphoma, gastric non-hodgkin lymphoma
Genetics & variants
GWAS landscape
92 GWAS associations across 31 studies. Top hits map to 33 distinct genes (as reported by GWAS).
Top associations by p-value
| rsID | p-value | Gene | Risk allele | Odds ratio |
|---|---|---|---|---|
| rs12682374 | 9e-29 | PCAT1, CASC8, POU5F1B | ? | 0.93 |
| rs1219651 | 1e-25 | FGFR2 | ? | 1.09 |
| rs2981584 | 1e-21 | FGFR2 | ? | 0.94 |
| rs10908278 | 3e-21 | HNF1B | ? | 1.06 |
| rs2097442 | 1e-19 | HLA-DRA - HLA-DRB9 | ? | 1.36 |
| rs4538746 | 2e-17 | HLA-DQB1 | T | 1.22 |
| rs112149573 | 2e-17 | TOX3 | ? | 1.08 |
| rs78540526 | 1e-15 | LINC01488 - PNCRNA-D | ? | 1.13 |
| rs35409710 | 2e-15 | HLA-DQB1 | ? | 1.09 |
| rs7463708 | 2e-15 | PCAT1, PRNCR1, CASC19 | ? | 1.08 |
| rs2858314 | 6e-15 | HLA-DQB1 - MTCO3P1 | G | 0.16 |
| rs34102154 | 1e-14 | HLA-DRB1 - HLA-DQA1 | G | 1.43 |
| rs11651755 | 1e-14 | HNF1B | ? | 1.06 |
| rs1485995 | 8e-14 | LINC01488 | ? | 0.95 |
| rs9273736 | 2e-13 | HLA-DQB1 | ? | 1.12 |
| rs2976384 | 3e-13 | PSCA, JRK | ? | 1.07 |
| rs3806624 | 5e-13 | EOMES - LINC01980 | G | 1.14 |
| rs35923643 | 8e-13 | GRAMD1B | G | 1.19 |
| rs17676949 | 2e-12 | PHLPP1 - BCL2 | A | 0.78 |
| rs2585181 | 3e-12 | PSCA - LY6K | ? | 1.05 |
| rs2471960 | 1e-11 | UQCRHP1 - AIF1 | A | 1.23 |
| rs3789068 | 1e-11 | MIR4435-2HG, BCL2L11 | G | 1.13 |
| rs13255292 | 1e-11 | PVT1 | C | 0.13 |
| rs12365699 | 2e-11 | Y_RNA - CXCR5 | G | 0.16 |
| rs2765974 | 2e-11 | CELF2 | C | 0.13 |
| rs149482608 | 2e-11 | SNHG10 | A | 1.67 |
| rs150480567 | 2e-11 | MTCO3P1 - HLA-DQB3 | ? | 0.17 |
| rs183161500 | 3e-11 | LINC01523 | A | 3.03 |
| rs7919208 | 5e-11 | LINC00841 - LINC03089 | ? | 1.23 |
| rs4007642 | 6e-11 | CDKN2B-AS1 | ? | 0.96 |
Top studies (by case count)
| Study | Lead author | Year | Cases | Controls | Title |
|---|---|---|---|---|---|
| GCST90651054 | Sato G | 2023 | 43,098 | 334,343 | Pan-cancer and cross-population genome-wide association studies dissect shared genetic backgrounds underlying carcinogenesis. |
| GCST90308764 | Sato G | 2023 | 29,753 | 150,462 | Pan-cancer and cross-population genome-wide association studies dissect shared genetic backgrounds underlying carcinogenesis. |
| GCST90651069 | Sato G | 2023 | 29,753 | 150,462 | Pan-cancer and cross-population genome-wide association studies dissect shared genetic backgrounds underlying carcinogenesis. |
| GCST90267403 | Berndt SI | 2022 | 13,763 | 18,862 | Distinct germline genetic susceptibility profiles identified for common non-Hodgkin lymphoma subtypes. |
| GCST90477247 | Verma A | 2024 | 5,910 | 443,358 | Diversity and scale: Genetic architecture of 2068 traits in the VA Million Veteran Program. |
| GCST90011819 | Rashkin SR | 2020 | 2,400 | 410,350 | Pan-cancer study detects genetic risk variants and shared genetic basis in two large cohorts. |
| GCST90651049 | Sato G | 2023 | 1,997 | 334,343 | Pan-cancer and cross-population genome-wide association studies dissect shared genetic backgrounds underlying carcinogenesis. |
| GCST90435644 | Zhou W | 2018 | 1,793 | 404,466 | Efficiently controlling for case-control imbalance and sample relatedness in large-scale genetic association studies. |
| GCST90079638 | Backman JD | 2021 | 1,579 | 386,126 | Exome sequencing and analysis of 454,787 UK Biobank participants. |
| GCST90083624 | Backman JD | 2021 | 1,579 | 386,126 | Exome sequencing and analysis of 454,787 UK Biobank participants. |
Variant details and genetic-evidence tiers
Tier distribution (top 50 variants)
| Tier | Variants |
|---|---|
| Tier 1: coding | 0 |
| Tier 2: splice/UTR | 0 |
| Tier 3: regulatory | 5 |
| Tier 4: intronic/intergenic | 45 |
MAF distribution
| Bucket | Variants |
|---|---|
| common (>=0.05) | 45 |
| low_freq (0.01-0.05) | 0 |
| rare (<0.01) | 2 |
| unknown | 3 |
Functional consequences
| Consequence | Count |
|---|---|
| intron_variant | 28 |
| intergenic_variant | 14 |
| regulatory_region_variant | 5 |
| non_coding_transcript_exon_variant | 3 |
Top variants
| rsID | Chr | Pos | Alleles | MAF | Consequence | Gene | p-value | Tier |
|---|---|---|---|---|---|---|---|---|
| rs12682374 | 8 | 127398703 | C>A,G,T | 0.05 | intron_variant | PCAT1, CASC8, POU5F1B | 9e-29 | Tier 4: intronic/intergenic |
| rs1219651 | 10 | 121584987 | G>A,C,T | 0.05 | intron_variant | FGFR2 | 1e-25 | Tier 4: intronic/intergenic |
| rs2981584 | 10 | 121590702 | A>C,G,T | 0.05 | intron_variant | FGFR2 | 1e-21 | Tier 4: intronic/intergenic |
| rs10908278 | 17 | 37739961 | A>C,G,T | 0.05 | intron_variant | HNF1B | 3e-21 | Tier 4: intronic/intergenic |
| rs2097442 | 6 | 32454414 | G>A,T | 0.05 | intron_variant | HLA-DRA - HLA-DRB9 | 1e-19 | Tier 4: intronic/intergenic |
| rs4538746 | 6 | 32664336 | C>A,G,T | 0.05 | intron_variant | HLA-DQB1 | 2e-17 | Tier 4: intronic/intergenic |
| rs112149573 | 16 | 52547333 | G>C,T | 0.05 | intron_variant | TOX3 | 2e-17 | Tier 4: intronic/intergenic |
| rs78540526 | 11 | 69516650 | C>T | 0.05 | regulatory_region_variant | LINC01488 - PNCRNA-D | 1e-15 | Tier 3: regulatory |
| rs35409710 | 6 | 32661126 | G>A | 0.05 | intron_variant | HLA-DQB1 | 2e-15 | Tier 4: intronic/intergenic |
| rs7463708 | 8 | 127091810 | G>A,C,T | 0.05 | non_coding_transcript_exon_variant | PCAT1, PRNCR1, CASC19 | 2e-15 | Tier 4: intronic/intergenic |
| rs2858314 | 6 | 32695671 | G>A,C | 0.233 | intergenic_variant | HLA-DQB1 - MTCO3P1 | 6e-15 | Tier 4: intronic/intergenic |
| rs34102154 | 6 | 32604329 | G>A | 0.05 | regulatory_region_variant | HLA-DRB1 - HLA-DQA1 | 1e-14 | Tier 3: regulatory |
| rs11651755 | 17 | 37739849 | T>C | 0.05 | intron_variant | HNF1B | 1e-14 | Tier 4: intronic/intergenic |
| rs1485995 | 11 | 69492939 | G>A,C | 0.05 | non_coding_transcript_exon_variant | LINC01488 | 8e-14 | Tier 4: intronic/intergenic |
| rs9273736 | 6 | 32661595 | G>A,C | 0.05 | intron_variant | HLA-DQB1 | 2e-13 | Tier 4: intronic/intergenic |
| rs2976384 | 8 | 142671576 | T>A,C | 0.05 | intergenic_variant | PSCA, JRK | 3e-13 | Tier 4: intronic/intergenic |
| rs3806624 | 3 | 27723132 | A>C,G,T | 0.05 | regulatory_region_variant | EOMES - LINC01980 | 5e-13 | Tier 3: regulatory |
| rs35923643 | 11 | 123484683 | A>G | 0.05 | intron_variant | GRAMD1B | 8e-13 | Tier 4: intronic/intergenic |
| rs17676949 | 18 | 63118405 | G>A,C | 0.05 | intergenic_variant | PHLPP1 - BCL2 | 2e-12 | Tier 4: intronic/intergenic |
| rs2585181 | 8 | 142690296 | C>A | 0.05 | intergenic_variant | PSCA - LY6K | 3e-12 | Tier 4: intronic/intergenic |
| rs2471960 | 6 | 31612762 | G>A,T | 0.05 | intron_variant | UQCRHP1 - AIF1 | 1e-11 | Tier 4: intronic/intergenic |
| rs3789068 | 2 | 111151670 | A>G | 0.05 | intron_variant | MIR4435-2HG, BCL2L11 | 1e-11 | Tier 4: intronic/intergenic |
| rs13255292 | 8 | 128064327 | C>T | 0.267 | intron_variant | PVT1 | 1e-11 | Tier 4: intronic/intergenic |
| rs12365699 | 11 | 118872577 | G>A | 0.137 | regulatory_region_variant | Y_RNA - CXCR5 | 2e-11 | Tier 3: regulatory |
| rs2765974 | 10 | 11246455 | C>A,G,T | 0.389 | intron_variant | CELF2 | 2e-11 | Tier 4: intronic/intergenic |
| rs149482608 | 14 | 95525224 | A>G | 0.001 | intron_variant | SNHG10 | 2e-11 | Tier 4: intronic/intergenic |
| rs150480567 | 6 | 32712473 | intergenic_variant | MTCO3P1 - HLA-DQB3 | 2e-11 | Tier 4: intronic/intergenic | ||
| rs183161500 | 20 | 48008648 | A>C,G | 0 | intron_variant | LINC01523 | 3e-11 | Tier 4: intronic/intergenic |
| rs7919208 | 10 | 44178109 | G>A,T | 0.05 | intergenic_variant | LINC00841 - LINC03089 | 5e-11 | Tier 4: intronic/intergenic |
| rs4007642 | 9 | 22093300 | A>C,T | 0.05 | intron_variant | CDKN2B-AS1 | 6e-11 | Tier 4: intronic/intergenic |
ClinVar germline variants
13 retrieved; paginated sample, class counts are floors:
6 pathogenic, 3 conflicting classifications of pathogenicity, 1 pathogenic/likely pathogenic, 1 benign, 1 likely benign, 1 uncertain significance
| ClinVar | Variant (HGVS) | Gene | Classification | Review |
|---|---|---|---|---|
| 31907 | NM_004048.4(B2M):c.286G>A (p.Asp96Asn) | B2M | Pathogenic | criteria provided, single submitter |
| 13970 | NM_004333.6(BRAF):c.1405G>C (p.Gly469Arg) | BRAF | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 13971 | NM_004333.6(BRAF):c.1406G>C (p.Gly469Ala) | BRAF | Pathogenic | criteria provided, single submitter |
| 7765 | NM_032977.4(CASP10):c.1241C>T (p.Ala414Val) | CASP10 | Pathogenic | no assertion criteria provided |
| 7766 | NM_032977.4(CASP10):c.769C>T (p.Gln257Ter) | CASP10 | Pathogenic | no assertion criteria provided |
| 7767 | NM_032977.4(CASP10):c.1042_1043insA (p.Gly348fs) | CASP10 | Pathogenic | no assertion criteria provided |
| 6192 | NM_003579.4(RAD54L):c.1331T>A (p.Val444Glu) | RAD54L | Pathogenic | no assertion criteria provided |
| 13972 | NM_004333.6(BRAF):c.1781A>G (p.Asp594Gly) | BRAF | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 801487 | NM_003579.4(RAD54L):c.796G>C (p.Val266Leu) | RAD54L | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 12367 | NM_000546.6(TP53):c.974G>T (p.Gly325Val) | TP53 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 801489 | NM_003579.4(RAD54L):c.1870-1G>A | LRRC41 | Uncertain significance | criteria provided, single submitter |
| 5638 | NM_012415.3(RAD54B):c.1778A>G (p.Asn593Ser) | RAD54B | Benign | criteria provided, single submitter |
| 801488 | NM_003579.4(RAD54L):c.888C>T (p.Asp296=) | RAD54L | Likely benign | criteria provided, multiple submitters, no conflicts |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 0 · Orphanet: 36 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
Somatic driver evidence (intOGen + CIViC, cohort fanout)
| Gene | intOGen role | Cancer types | CIViC |
|---|---|---|---|
| EZH2 | Act | ALL,AML,DLBCLNOS,ES,MLYM,NHL | CIViC #63 |
| BRAF | Act | BLCA,BRCA,CHOL,CLLSLL,COAD,COADREAD,CSCC,DLBCLNOS,GBM,GIST,HGGNOS,LGGNOS,LUAD,MEL,MLYM,NSCLC,OVT,PAST,PCM,PRAD,PRCC,PROSTATE,READ,SACA,SKCM,STAD,UCEC,WDTC | CIViC #5 |
| TP53 | LoF | ACC,ALL,AML,ANGS,ANSC,BCC,BL,BLADDER,BLCA,BRCA,CCRCC,CEAD,CESC,CHOL,CHRCC,CLLSLL,COAD,COADREAD,CSCC,DLBCLNOS,EGC,ES,ESCA,ESCC,GB,GBC,GBM,GIST,HCC,HGGNOS,HNSC,LGGNOS,LIPO,LMS,LNM,LUAD,LUSC,MBL,MEL,MLYM,MT,NBL,NETNOS,NHL,NPC,NSCLC,OS,OVT,PAAD,PANCREAS,PAST,PCM,PLMESO,PRAD,PRCC,PROSTATE,RCC,READ,SACA,SARCNOS,SCLC,SIC,SKCM,SKIN,SOFT_TISSUE,STAD,STOMACH,THYM,UCEC,UCS,UTUC,VULVA,WDTC,WT | CIViC #45 |
| B2M | LoF | CESC,DLBCLNOS,HNSC,MEL,MLYM,NHL,NSCLC | CIViC #537 |
| RAD54L | CIViC #6676 |
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|---|---|
| EZH2 | Orphanet:3447 | Weaver syndrome |
| BRAF | Orphanet:1340 | Cardiofaciocutaneous syndrome |
| BRAF | Orphanet:146 | Differentiated thyroid carcinoma |
| BRAF | Orphanet:251615 | Pilomyxoid astrocytoma |
| BRAF | Orphanet:389 | Langerhans cell histiocytosis |
| BRAF | Orphanet:500 | Noonan syndrome with multiple lentigines |
| BRAF | Orphanet:54595 | Craniopharyngioma |
| BRAF | Orphanet:58017 | Classic hairy cell leukemia |
| BRAF | Orphanet:626 | Large/giant congenital melanocytic nevus |
| BRAF | Orphanet:648 | Noonan syndrome |
| BRAF | Orphanet:840 | Syringocystadenoma papilliferum |
| BRAF | Orphanet:96253 | Cushing disease |
| TP53 | Orphanet:1333 | Familial pancreatic carcinoma |
| TP53 | Orphanet:145 | Hereditary breast and/or ovarian cancer syndrome |
| TP53 | Orphanet:1501 | Adrenocortical carcinoma |
| TP53 | Orphanet:210159 | Adult hepatocellular carcinoma |
| TP53 | Orphanet:251576 | Gliosarcoma |
| TP53 | Orphanet:251579 | Giant cell glioblastoma |
| TP53 | Orphanet:251899 | Choroid plexus carcinoma |
| TP53 | Orphanet:2807 | Papilloma of choroid plexus |
| TP53 | Orphanet:293199 | Pleomorphic rhabdomyosarcoma |
| TP53 | Orphanet:3318 | Essential thrombocythemia |
| TP53 | Orphanet:524 | Li-Fraumeni syndrome |
| TP53 | Orphanet:52688 | Myelodysplastic syndrome |
| TP53 | Orphanet:585909 | B-lymphoblastic leukemia/lymphoma with t(9;22)(q34.1;q11.2) |
| TP53 | Orphanet:667662 | Breast implant-associated anaplastic large cell lymphoma |
| TP53 | Orphanet:668 | Osteosarcoma |
| TP53 | Orphanet:67038 | B-cell chronic lymphocytic leukemia |
| TP53 | Orphanet:70573 | Small cell lung cancer |
| TP53 | Orphanet:96253 | Cushing disease |
| TP53 | Orphanet:99756 | Alveolar rhabdomyosarcoma |
| TP53 | Orphanet:99757 | Embryonal rhabdomyosarcoma |
| CASP10 | Orphanet:3261 | Autoimmune lymphoproliferative syndrome |
| B2M | Orphanet:314652 | Variant ABeta2M amyloidosis |
| B2M | Orphanet:34592 | Immunodeficiency by defective expression of MHC class I |
| RAD54L | Orphanet:227535 | Hereditary breast cancer |
Cohort genes → proteins
8 cohort genes, 8 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|---|
| civic_only | 1 |
| multi_evidence | 7 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|---|---|---|---|---|
| EZH2 | HGNC:3527 | ENSG00000106462 | Q15910 | Histone-lysine N-methyltransferase EZH2 | civic_evidence |
| BRAF | HGNC:1097 | ENSG00000157764 | P15056 | Serine/threonine-protein kinase B-raf | clinvar |
| TP53 | HGNC:11998 | ENSG00000141510 | P04637 | Cellular tumor antigen p53 | clinvar |
| CASP10 | HGNC:1500 | ENSG00000003400 | Q92851 | Caspase-10 | clinvar |
| LRRC41 | HGNC:16917 | ENSG00000132128 | Q15345 | Leucine-rich repeat-containing protein 41 | clinvar |
| RAD54B | HGNC:17228 | ENSG00000197275 | Q9Y620 | DNA repair and recombination protein RAD54B | clinvar |
| B2M | HGNC:914 | ENSG00000166710 | P61769 | Beta-2-microglobulin | clinvar |
| RAD54L | HGNC:9826 | ENSG00000085999 | Q92698 | DNA repair and recombination protein RAD54-like | clinvar |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|---|---|
| EZH2 | Histone-lysine N-methyltransferase EZH2 | Catalytic subunit of the PRC2/EED-EZH2 complex, a Polycomb group (PcG) complex that methylates ‘Lys-9’ (H3K9me) and ‘Lys-27’ (H3K27me) of histone H3, leading to transcriptional repression of the affected target gene. |
| BRAF | Serine/threonine-protein kinase B-raf | Protein kinase involved in the transduction of mitogenic signals from the cell membrane to the nucleus. |
| TP53 | Cellular tumor antigen p53 | Multifunctional transcription factor that induces cell cycle arrest, DNA repair or apoptosis upon binding to its target DNA sequence. |
| CASP10 | Caspase-10 | Involved in the activation cascade of caspases responsible for apoptosis execution. |
| LRRC41 | Leucine-rich repeat-containing protein 41 | Probable substrate recognition component of an ECS (Elongin BC-CUL2/5-SOCS-box protein) E3 ubiquitin ligase complex which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. |
| RAD54B | DNA repair and recombination protein RAD54B | Multifunctional ATPase that could play with RAD54, a redundant role in homologous recombination (HR), a major pathway for repairing DNA double-strand breaks (DSBs), single-stranded DNA (ssDNA) gaps, and stalled or collapsed replication for… |
| B2M | Beta-2-microglobulin | Component of the class I major histocompatibility complex (MHC). |
| RAD54L | DNA repair and recombination protein RAD54-like | Multifunctional ATPase that plays a role in homologous recombination (HR) which is a major pathway for repairing DNA double-strand breaks (DSBs), single-stranded DNA (ssDNA) gaps, and stalled or collapsed replication forks. |
Protein-family classification
Druggable: 6 · Difficult: 1 · Unknown: 1 · Druggable fraction: 0.75
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|---|---|---|
| Enzyme (other) | 4 | 6.0× | 0.013 |
| Antibody/Immunoglobulin | 1 | 3.6× | 0.424 |
| Kinase | 1 | 3.5× | 0.424 |
| Transcription factor | 1 | 1.0× | 0.805 |
| Other/Unknown | 1 | 0.2× | 0.999 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|---|---|---|---|
| EZH2 | Enzyme (other) | yes | 2.1.1.356 | SANT/Myb, SET_dom, EZH1/EZH2_N |
| BRAF | Kinase | yes | 2.7.10.2 | Prot_kinase_dom, Ser-Thr/Tyr_kinase_cat_dom, PKC_DAG/PE |
| TP53 | Transcription factor | no | p53_tumour_suppressor, p53-like_TF_DNA-bd_sf, p53_tetrameristn | |
| CASP10 | Enzyme (other) | yes | 3.4.22.63 | Pept_C14_p20, DED_dom, Pept_C14_p10 |
| LRRC41 | Other/Unknown | no | Leu_rpt_41, LRR_dom_sf | |
| RAD54B | Enzyme (other) | yes | 3.6.4.B9 | SNF2_N, Helicase_C-like, Helicase_ATP-bd |
| B2M | Antibody/Immunoglobulin | yes | Ig/MHC_CS, Ig_C1-set, Ig-like_dom | |
| RAD54L | Enzyme (other) | yes | 3.6.4.B9 | SNF2_N, Helicase_C-like, Helicase_ATP-bd |
Expression context
Cohort genes with no expression data: 0.
6 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 0 |
| broad (>20) | 8 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|---|
| ventricular zone | 3 |
| ganglionic eminence | 2 |
| colonic epithelium | 2 |
| granulocyte | 2 |
| monocyte | 2 |
| right uterine tube | 2 |
| embryo | 1 |
| buccal mucosa cell | 1 |
| calcaneal tendon | 1 |
| tendon of biceps brachii | 1 |
| adenohypophysis | 1 |
| left uterine tube | 1 |
| male germ line stem cell (sensu Vertebrata) in testis | 1 |
| primordial germ cell in gonad | 1 |
| leukocyte | 1 |
| left testis | 1 |
| right testis | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|---|---|---|---|
| EZH2 | 216 | ubiquitous | marker | ganglionic eminence, ventricular zone, embryo |
| BRAF | 265 | ubiquitous | marker | buccal mucosa cell, colonic epithelium, calcaneal tendon |
| TP53 | 223 | ubiquitous | marker | ventricular zone, ganglionic eminence, tendon of biceps brachii |
| CASP10 | 206 | ubiquitous | marker | colonic epithelium, granulocyte, monocyte |
| LRRC41 | 281 | ubiquitous | marker | right uterine tube, left uterine tube, adenohypophysis |
| RAD54B | 201 | ubiquitous | yes | right uterine tube, primordial germ cell in gonad, male germ line stem cell (sensu Vertebrata) in testis |
| B2M | 134 | ubiquitous | marker | granulocyte, monocyte, leukocyte |
| RAD54L | 173 | ubiquitous | yes | left testis, right testis, ventricular zone |
Protein interactions among cohort
Intra-cohort edges: 2.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|---|
| TP53 | 22,736 |
| EZH2 | 9,646 |
| BRAF | 7,394 |
| RAD54L | 2,927 |
| RAD54B | 2,743 |
| CASP10 | 1,242 |
| LRRC41 | 683 |
| B2M | 415 |
Intra-cohort edges
| A | B | Sources |
|---|---|---|
| BRAF | TP53 | string_interaction |
| CASP10 | TP53 | string_interaction |
Structural data
PDB: 6 · AlphaFold-only: 2 · No structure: 0
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|---|---|
| B2M | P61769 | 1,226 |
| TP53 | P04637 | 313 |
| BRAF | P15056 | 131 |
| EZH2 | Q15910 | 38 |
| RAD54B | Q9Y620 | 4 |
| RAD54L | Q92698 | 1 |
AlphaFold-only cohort genes (top 30 by pLDDT)
| Symbol | UniProt | pLDDT |
|---|---|---|
| LRRC41 | Q15345 | 71.96 |
| CASP10 | Q92851 | 69.54 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 139. Enrichment computed across 8 evidence-associated genes (6 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 6 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| TP53 Regulates Transcription of Caspase Activators and Caspases | 2 | 317.2× | 0.002 | TP53, CASP10 |
| Loss of function of TP53 in cancer due to loss of tetramerization ability | 1 | 1903.3× | 0.024 | TP53 |
| Regulation of PTEN gene transcription | 2 | 59.5× | 0.024 | TP53, EZH2 |
| Regulation of TP53 Expression | 1 | 951.7× | 0.029 | TP53 |
| Transcriptional activation of cell cycle inhibitor p21 | 1 | 475.8× | 0.029 | TP53 |
| Signaling by MRAS-complex mutants | 1 | 475.8× | 0.029 | BRAF |
| Signalling to p38 via RIT and RIN | 1 | 380.7× | 0.029 | BRAF |
| FasL/ CD95L signaling | 1 | 380.7× | 0.029 | CASP10 |
| Activation of NOXA and translocation to mitochondria | 1 | 317.2× | 0.029 | TP53 |
| Negative feedback regulation of MAPK pathway | 1 | 317.2× | 0.029 | BRAF |
| ARMS-mediated activation | 1 | 271.9× | 0.029 | BRAF |
| RUNX3 regulates CDKN1A transcription | 1 | 271.9× | 0.029 | TP53 |
| Modulation by Mtb of host immune system | 1 | 271.9× | 0.029 | B2M |
| Prolonged ERK activation events | 1 | 237.9× | 0.029 | BRAF |
| TRAIL signaling | 1 | 237.9× | 0.029 | CASP10 |
| SHOC2 M1731 mutant abolishes MRAS complex function | 1 | 237.9× | 0.029 | BRAF |
| Gain-of-function MRAS complexes activate RAF signaling | 1 | 237.9× | 0.029 | BRAF |
| PI5P Regulates TP53 Acetylation | 1 | 211.5× | 0.029 | TP53 |
| Activation of PUMA and translocation to mitochondria | 1 | 190.3× | 0.029 | TP53 |
| Nef mediated downregulation of MHC class I complex cell surface expression | 1 | 190.3× | 0.029 | B2M |
| Signaling by FGFR3 | 1 | 190.3× | 0.029 | BRAF |
| Infection with Mycobacterium tuberculosis | 1 | 190.3× | 0.029 | B2M |
| RHOBTB3 ATPase cycle | 1 | 190.3× | 0.029 | LRRC41 |
| Oxidative Stress Induced Senescence | 2 | 30.2× | 0.029 | TP53, EZH2 |
| Class I MHC mediated antigen processing & presentation | 2 | 23.4× | 0.029 | LRRC41, B2M |
| Endosomal/Vacuolar pathway | 1 | 173.0× | 0.030 | B2M |
| Signaling by FGFR4 | 1 | 173.0× | 0.030 | BRAF |
| Frs2-mediated activation | 1 | 158.6× | 0.030 | BRAF |
| TP53 Regulates Transcription of Death Receptors and Ligands | 1 | 158.6× | 0.030 | TP53 |
| Urea cycle | 1 | 146.4× | 0.030 | TP53 |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 8 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| determination of adult lifespan | 3 | 162.0× | 9e-05 | TP53, RAD54B, RAD54L |
| T cell differentiation in thymus | 3 | 154.1× | 9e-05 | BRAF, TP53, B2M |
| positive regulation of cellular senescence | 2 | 324.1× | 0.001 | TP53, B2M |
| positive regulation of execution phase of apoptosis | 2 | 210.7× | 0.002 | TP53, CASP10 |
| chromosome organization | 2 | 145.3× | 0.003 | TP53, RAD54L |
| reciprocal meiotic recombination | 2 | 140.4× | 0.003 | RAD54B, RAD54L |
| response to ionizing radiation | 2 | 102.8× | 0.006 | RAD54B, RAD54L |
| negative regulation of iron ion transport | 1 | 2106.5× | 0.008 | B2M |
| negative regulation of helicase activity | 1 | 2106.5× | 0.008 | TP53 |
| cellular response to actinomycin D | 1 | 2106.5× | 0.008 | TP53 |
| regulation of intrinsic apoptotic signaling pathway by p53 class mediator | 1 | 2106.5× | 0.008 | TP53 |
| negative regulation of G1 to G0 transition | 1 | 2106.5× | 0.008 | TP53 |
| positive regulation of neuron apoptotic process | 2 | 68.0× | 0.008 | TP53, CASP10 |
| cellular response to xenobiotic stimulus | 2 | 60.2× | 0.008 | BRAF, TP53 |
| antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent | 1 | 1053.2× | 0.010 | B2M |
| regulation of iron ion transport | 1 | 1053.2× | 0.010 | B2M |
| positive regulation of mitochondrial membrane permeability | 1 | 1053.2× | 0.010 | TP53 |
| hepatocyte homeostasis | 1 | 1053.2× | 0.010 | EZH2 |
| cellular response to iron(III) ion | 1 | 1053.2× | 0.010 | B2M |
| oligodendrocyte apoptotic process | 1 | 1053.2× | 0.010 | TP53 |
| negative regulation of glucose catabolic process to lactate via pyruvate | 1 | 1053.2× | 0.010 | TP53 |
| negative regulation of pentose-phosphate shunt | 1 | 1053.2× | 0.010 | TP53 |
| negative regulation of forebrain neuron differentiation | 1 | 1053.2× | 0.010 | B2M |
| regulation of gliogenesis | 1 | 702.2× | 0.011 | EZH2 |
| obsolete homolactic fermentation | 1 | 702.2× | 0.011 | TP53 |
| cellular response to trichostatin A | 1 | 702.2× | 0.011 | EZH2 |
| CD4-positive or CD8-positive, alpha-beta T cell lineage commitment | 1 | 702.2× | 0.011 | BRAF |
| signal transduction by p53 class mediator | 1 | 702.2× | 0.011 | TP53 |
| negative regulation of miRNA processing | 1 | 702.2× | 0.011 | TP53 |
| intrinsic apoptotic signaling pathway in response to hypoxia | 1 | 702.2× | 0.011 | TP53 |
Therapeutics
Drugs indicated for this disease
6 approved, 51 in late-stage (phase 3) trials. Disease-direct ChEMBL indications, not inferred from the associated-gene cohort below.
| Drug | Development status |
|---|---|
| Brentuximab Vedotin | Approved (phase 4) |
| Carmustine | Approved (phase 4) |
| Idelalisib | Approved (phase 4) |
| Methotrexate | Approved (phase 4) |
| Plerixafor | Approved (phase 4) |
| Rituximab | Approved (phase 4) |
| Allopurinol | Phase 3 (in late-stage trials) |
| Amoxicillin | Phase 3 (in late-stage trials) |
| Asparaginase | Phase 3 (in late-stage trials) |
| Bendamustine | Phase 3 (in late-stage trials) |
| Bortezomib | Phase 3 (in late-stage trials) |
| Calcium Carbonate | Phase 3 (in late-stage trials) |
| Carboplatin | Phase 3 (in late-stage trials) |
| Cisplatin | Phase 3 (in late-stage trials) |
| Clarithromycin | Phase 3 (in late-stage trials) |
| Copanlisib | Phase 3 (in late-stage trials) |
| Cyclosporine | Phase 3 (in late-stage trials) |
| Cytarabine | Phase 3 (in late-stage trials) |
| Daunorubicin | Phase 3 (in late-stage trials) |
| Dexamethasone | Phase 3 (in late-stage trials) |
| Doxorubicin | Phase 3 (in late-stage trials) |
| Enzastaurin | Phase 3 (in late-stage trials) |
| Ergocalciferol | Phase 3 (in late-stage trials) |
| Etoposide | Phase 3 (in late-stage trials) |
| Filgrastim | Phase 3 (in late-stage trials) |
| Fludarabine | Phase 3 (in late-stage trials) |
| Gemcitabine | Phase 3 (in late-stage trials) |
| Histamine | Phase 3 (in late-stage trials) |
| Ibritumomab Tiuxetan | Phase 3 (in late-stage trials) |
| Ibrutinib | Phase 3 (in late-stage trials) |
| Idarubicin | Phase 3 (in late-stage trials) |
| Ifosfamide | Phase 3 (in late-stage trials) |
| Inotuzumab Ozogamicin | Phase 3 (in late-stage trials) |
| Lenalidomide | Phase 3 (in late-stage trials) |
| Lisocabtagene Maraleucel | Phase 3 (in late-stage trials) |
| Metronidazole | Phase 3 (in late-stage trials) |
| Mosunetuzumab | Phase 3 (in late-stage trials) |
| Mycophenolate Mofetil | Phase 3 (in late-stage trials) |
| Obinutuzumab | Phase 3 (in late-stage trials) |
| Ofatumumab | Phase 3 (in late-stage trials) |
| Oxaliplatin | Phase 3 (in late-stage trials) |
| Paclitaxel | Phase 3 (in late-stage trials) |
| Pixantrone | Phase 3 (in late-stage trials) |
| Polatuzumab Vedotin | Phase 3 (in late-stage trials) |
| Prednisolone | Phase 3 (in late-stage trials) |
| Prednisone | Phase 3 (in late-stage trials) |
| Sargramostim | Phase 3 (in late-stage trials) |
| Sirolimus | Phase 3 (in late-stage trials) |
| TOSITUMOMAB 131I | Phase 3 (in late-stage trials) |
| Tacrolimus Anhydrous | Phase 3 (in late-stage trials) |
| Tisagenlecleucel | Phase 3 (in late-stage trials) |
| Tocilizumab | Phase 3 (in late-stage trials) |
| Tositumomab | Phase 3 (in late-stage trials) |
| Vincristine | Phase 3 (in late-stage trials) |
| Vinorelbine | Phase 3 (in late-stage trials) |
| YTTRIUM Y 90 IBRITUMOMAB TIUXETAN | Phase 3 (in late-stage trials) |
| Zanubrutinib | Phase 3 (in late-stage trials) |
Earlier-phase candidates (phase 2, investigational — efficacy not yet established): 1018 ISS, ANTINEOPLASTON A10, Acalabrutinib, Acetaminophen, Aldesleukin, Amifostine, Ascorbic Acid, Atezolizumab, Atorvastatin, Belinostat, Bevacizumab, Blinatumomab, Busulfan, CPI 613, Clofarabine, Crisantaspase, Denileukin Diftitox, Diphenhydramine, Durvalumab, Duvelisib, Entospletinib, Epcoritamab, Epirubicin, Epratuzumab, Etoposide Phosphate, Fludarabine Phosphate, Gallium Nitrate, Golcadomide, Irinotecan, Lamivudine, Lomustine, Loncastuximab Tesirine, Melphalan, Methylprednisolone, Mitoxantrone, Motexafin Gadolinium, Motixafortide, Nivolumab, Odronextamab, Ondansetron, Panobinostat, Pegargiminase, Pegfilgrastim, Pembrolizumab, Potassium Iodide, Romiplostim, Tafasitamab, Temozolomide, Temsirolimus, Tetracycline, Thalidomide, Tislelizumab, Topotecan, Treosulfan, Tucidinostat, Umbralisib, Venetoclax, Vorinostat.
Drug target analysis
Approved (phase 4): 3 · Phase ≥3: 3 · Phased (≥1): 4 · Undrugged: 4
Druggability breadth: 6 of 8 evidence-associated genes (75%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Genes with an approved drug
The molecule shown is one approved compound that hits the gene — not necessarily a drug of choice or one indicated for this disease.
| Symbol | Example approved molecule |
|---|---|
| EZH2 | TAZEMETOSTAT |
| BRAF | VEMURAFENIB |
| TP53 | NITROFURANTOIN |
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|---|---|
| TP53 | 196 | 4 |
| BRAF | 48 | 4 |
| EZH2 | 6 | 4 |
| RAD54L | 1 | 2 |
| CASP10 | 0 | 0 |
| LRRC41 | 0 | 0 |
| RAD54B | 0 | 0 |
| B2M | 0 | 0 |
Drugs targeting cohort genes (top 30)
| Molecule | Max phase | Targets in cohort |
|---|---|---|
| TAZEMETOSTAT | 4 | EZH2 |
| VEMURAFENIB | 4 | BRAF |
| PONATINIB | 4 | BRAF |
| FEDRATINIB | 4 | BRAF |
| SORAFENIB | 4 | BRAF |
| DASATINIB ANHYDROUS | 4 | BRAF |
| RUXOLITINIB | 4 | BRAF |
| INFIGRATINIB PHOSPHATE | 4 | BRAF |
| INFIGRATINIB | 4 | BRAF |
| REGORAFENIB | 4 | BRAF |
| DABRAFENIB | 4 | BRAF |
| COBIMETINIB | 4 | BRAF |
| NILOTINIB | 4 | BRAF |
| ABEMACICLIB | 4 | BRAF |
| ENCORAFENIB | 4 | BRAF |
| TOVORAFENIB | 4 | BRAF |
| PAZOPANIB | 4 | BRAF |
| DASATINIB | 4 | BRAF |
| ERLOTINIB | 4 | BRAF |
| GEFITINIB | 4 | BRAF |
| IMATINIB | 4 | BRAF |
| NITROFURANTOIN | 4 | TP53 |
| DIOSMIN | 4 | TP53 |
| VERTEPORFIN | 4 | TP53 |
| CANDESARTAN CILEXETIL | 4 | TP53 |
| DIENESTROL | 4 | TP53 |
| CLOTRIMAZOLE | 4 | TP53 |
| COLCHICINE | 4 | TP53 |
| NABUMETONE | 4 | TP53 |
| SALMETEROL XINAFOATE | 4 | TP53 |
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 5.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|---|---|
| BRAF | 1,442 | Binding:1400, Functional:37, ADMET:5 |
| TP53 | 869 | Binding:775, ADMET:83, Functional:10, Toxicity:1 |
| EZH2 | 839 | Binding:833, Functional:6 |
| CASP10 | 22 | Binding:21, Functional:1 |
| B2M | 5 | Binding:5 |
| RAD54L | 3 | Functional:2, Binding:1 |
Cohort enzymes (BRENDA EC)
| Symbol | EC numbers | Names |
|---|---|---|
| EZH2 | 2.1.1.356 | [histone H3]-lysine27 N-trimethyltransferase |
| BRAF | 2.7.10.2, 2.7.11.1 | non-specific protein-tyrosine kinase, non-specific serine/threonine protein kinase |
| CASP10 | 3.4.22.63 | caspase-10 |
| RAD54B | 3.6.4.B9 | |
| RAD54L | 3.6.4.B9 |
Cohort genes with high screening signal
≥100 ChEMBL assays — a studied-ness signal; see Therapeutics for approved-drug status.
| Symbol | ChEMBL assays |
|---|---|
| EZH2 | 839 |
| BRAF | 1,442 |
| TP53 | 869 |
Pharmacogenomics
Cohort genes with a PharmGKB record: 8; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Drug repurposing candidates
30 approved/phased drugs hit cohort targets but don’t yet appear in disease-level clinical trials. Target-inhibition rationale is strongest for cancer driver genes; a bioactivity hit is a screening signal, not a treatment claim.
| Compound | Max phase | Cohort target (bioactivity) |
|---|---|---|
| TAZEMETOSTAT | 4 | EZH2 |
| VEMURAFENIB | 4 | BRAF |
| PONATINIB | 4 | BRAF |
| FEDRATINIB | 4 | BRAF |
| SORAFENIB | 4 | BRAF |
| DASATINIB ANHYDROUS | 4 | BRAF |
| RUXOLITINIB | 4 | BRAF |
| INFIGRATINIB PHOSPHATE | 4 | BRAF |
| INFIGRATINIB | 4 | BRAF |
| REGORAFENIB | 4 | BRAF |
| DABRAFENIB | 4 | BRAF |
| COBIMETINIB | 4 | BRAF |
| NILOTINIB | 4 | BRAF |
| ABEMACICLIB | 4 | BRAF |
| ENCORAFENIB | 4 | BRAF |
| TOVORAFENIB | 4 | BRAF |
| PAZOPANIB | 4 | BRAF |
| DASATINIB | 4 | BRAF |
| ERLOTINIB | 4 | BRAF |
| GEFITINIB | 4 | BRAF |
| IMATINIB | 4 | BRAF |
| NITROFURANTOIN | 4 | TP53 |
| DIOSMIN | 4 | TP53 |
| VERTEPORFIN | 4 | TP53 |
| CANDESARTAN CILEXETIL | 4 | TP53 |
| DIENESTROL | 4 | TP53 |
| CLOTRIMAZOLE | 4 | TP53 |
| COLCHICINE | 4 | TP53 |
| NABUMETONE | 4 | TP53 |
| SALMETEROL XINAFOATE | 4 | TP53 |
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|---|---|---|
| A | Approved (phase 4 drug) | 3 | EZH2, BRAF, TP53 |
| B | Phased (≥1) drug, not yet approved | 1 | RAD54L |
| C | Druggable family + PDB, no drug | 2 | RAD54B, B2M |
| D | Druggable family + AlphaFold only, no drug | 1 | CASP10 |
| E | Difficult family or no structure, no drug | 1 | LRRC41 |
Undrugged target profiles
4 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
| Symbol | ChEMBL assays | Drugged partners (top 3) |
|---|---|---|
| CASP10 | 22 | — |
| LRRC41 | 0 | — |
| RAD54B | 0 | — |
| B2M | 5 | — |
Clinical trials & evidence
Clinical trials
Clinical trials: 1,051.
Phase distribution (across all retrieved trials)
| Phase | Trials |
|---|---|
| PHASE2 | 304 |
| PHASE1 | 304 |
| Not specified | 179 |
| PHASE1/PHASE2 | 162 |
| PHASE3 | 53 |
| EARLY_PHASE1 | 26 |
| PHASE4 | 18 |
| PHASE2/PHASE3 | 5 |
Top trials by phase / activity
| NCT | Phase | Status | Title |
|---|---|---|---|
| NCT06665737 | PHASE4 | NOT_YET_RECRUITING | Outcomes of Early and Late Administration G-CSF for Primary Prophylaxis in Non-Hodgkin’s Lymphoma Patients |
| NCT06876649 | PHASE4 | RECRUITING | A Master Protocol to Evaluate the Long-Term Safety of (LY3527727) Pirtobrutinib |
| NCT06876662 | PHASE4 | RECRUITING | A Study of (LY3527727) Pirtobrutinib in Participants With Previously Treated Chronic Lymphocytic Leukemia/Small Lymphocytic Lymphoma or Non-Hodgkin Lymphoma |
| NCT07016165 | PHASE4 | RECRUITING | Ciprofloxacin vs Ceftazidime for Empirical Treatment of High-Risk Neutropenic Fever in Children With Hematologic Malignancies |
| NCT00090038 | PHASE4 | COMPLETED | Effect of Rituximab on Immunological Recall Response to Specific Antigens in the Treatment of Non-Hodgkin’s Lymphoma |
| NCT00162955 | PHASE4 | COMPLETED | Prevention of CHOP-induced Chronic Cardiotoxicity |
| NCT00277160 | PHASE4 | COMPLETED | A Study of Primary Prophylaxis With Neulasta (Pegfilgrastim) Versus Secondary Prophylaxis After Chemotherapy in Elderly Subjects (>/= 65 Years Old) With Cancer |
| NCT00352703 | PHASE4 | COMPLETED | PROMPT - Palifermin in Reduction of Oral Mucositis in PBSC Transplantation |
| NCT00430352 | PHASE4 | COMPLETED | MAXIMA Study: A Study of Maintenance Therapy With MabThera (Rituximab) in Patients With Non-Hodgkin’s Lymphoma. |
| NCT00797810 | PHASE4 | UNKNOWN | Intensification Therapy of Mature B-ALL, Burkitt and Burkitt Like and Other High Grade Non-Hodgkin’s Lymphoma in Adults |
| NCT00808171 | PHASE4 | COMPLETED | Evaluation of the Analgesy With Emla and/or Nitrous Oxide in Pediatric Patients for Lumbar Puncture |
| NCT00926757 | PHASE4 | COMPLETED | Prophylactic Use of Entecavir for Non-Hodgkin’s Lymphoma Patients With Resolved Hepatitis B |
| NCT00969462 | PHASE4 | COMPLETED | Doxorubicin Pharmacokinetics and Response in Non Hodgkin’s Lymphoma |
| NCT01124526 | PHASE4 | COMPLETED | Efficacy Response Duration and Toxicity of Rituximab, Fludarabine, and Cyclophosphamide (RFC) as 1st Line Treatment and Rituximab (R) in Maintenance Treatment in Follicular Non Hodgkin (FNH) Lymphoma |
| NCT01164475 | PHASE4 | COMPLETED | Evaluation of Approved Weight-Based Dose Compared to Fixed Dose of Plerixafor in Patients With Non-Hodgkin’s Lymphoma (NHL) Weighing Less Than 70 Kilograms |
| NCT01180049 | PHASE4 | COMPLETED | Comparison Of 2 Doses Of Temsirolimus (Torisel) In Patients With Mantle Cell Lymphoma |
| NCT02782845 | PHASE4 | COMPLETED | An Expanded Access Program of Pegfilgrastim (Neulastim) in Participants With Non-Hodgkin’s Lymphoma (NHL) |
| NCT05191225 | PHASE4 | UNKNOWN | Ultrafast Truxima Infusion in Non-Hodgkin’s Lymphoma: Txagorapid Study |
| NCT00877214 | PHASE3 | ACTIVE_NOT_RECRUITING | Significance of Duration of Maintenance Therapy With Rituximab in Non-Hodgkin Lymphomas |
| NCT03844048 | PHASE3 | ACTIVE_NOT_RECRUITING | An Extension Study of Venetoclax for Subjects Who Have Completed a Prior Venetoclax Clinical Trial |
| NCT04459416 | PHASE3 | ACTIVE_NOT_RECRUITING | Managing Pain and Symptom Burden Caused by Chemotherapy in People With Myeloma or Lymphoma |
| NCT05171647 | PHASE3 | ACTIVE_NOT_RECRUITING | A Study Evaluating Efficacy and Safety of Mosunetuzumab in Combination With Polatuzumab Vedotin Compared to Rituximab in Combination With Gemcitabine Plus Oxaliplatin in Participants With Relapsed or Refractory Aggressive B-Cell Non-Hodgkin’s Lymphoma |
| NCT05645107 | PHASE3 | RECRUITING | A Study to Evaluate Efficacy, Safety, and PK of XEMBIFY®+Standard Medical Treatment (SMT) Compared to Placebo+SMT to Prevent Infections in Participants With HGG and Recurrent or Severe Infections Associated With B-cell Chronic Lymphocytic Leukemia, Multiple Myeloma, and Non-Hodgkin Lymphoma |
| NCT06520163 | PHASE3 | RECRUITING | Comparison Study of EAP and Disease-Specific Chemotherapy Regimens in Hematopoietic Stem Cell Mobilization for Lymphoma |
| NCT07188558 | PHASE3 | RECRUITING | A Study to Investigate Ronde-cel Versus Investigator’s Choice CD19 CAR T-Cell Therapy |
| NCT07202052 | PHASE2/PHASE3 | RECRUITING | Role of Antibiotic Therapy or Immunoglobulin On iNfections in hAematoLogy Platform Trial (RATIONAL-PT) |
| NCT07582432 | PHASE3 | RECRUITING | A Clinical Trial to Evaluate Efficacy, Safety, and Pharmacokinetics of Gamunex in Participants With Chronic Lymphocytic Leukemia, Multiple Myeloma, or Non-Hodgkin Lymphoma |
| NCT00039910 | PHASE3 | COMPLETED | Safety and Efficacy of (PN-152,243)/PN-196,444 in the Prevention of Thrombocytopenia |
| NCT00057343 | PHASE3 | TERMINATED | Safety and Efficacy of Zevalin in the Treatment of Non-Hodgkin’s Lymphoma |
| NCT00078598 | PHASE3 | UNKNOWN | A Study of Rituximab Versus Iodine I 131 Tositumomab Therapy for Patients With Non-Hodgkin’s Lymphoma |
| NCT00091676 | PHASE3 | UNKNOWN | Study of the BiovaxId Tumor Derived Idiotype Vaccine in Patients With Follicular Lymphoma |
| NCT00129090 | PHASE3 | COMPLETED | Mega-CHOEP: Conventional Chemo Vs HD Chemo Followed by Auto SCT in Younger Pts With Aggressive Non-Hodgkin’s Lymphoma |
| NCT00133302 | PHASE3 | TERMINATED | Study of Standard CHOP Versus Biweekly CHOP in Aggressive Non-Hodgkin’s Lymphoma (JCOG9809) |
| NCT00139841 | PHASE3 | COMPLETED | Safety and Efficacy of Treanda™ (Bendamustine HCl) in Patients With Indolent Non-Hodgkin’s Lymphoma (NHL) Who Are Refractory to Rituximab |
| NCT00145652 | PHASE3 | COMPLETED | Adjuvant I.V. Iron Therapy During Erythropoetin Treatment of Anemic Patients With Lymphoproliferative Disorders. |
| NCT00152139 | PHASE3 | COMPLETED | Stem Cell Transplantation for Patients With Hematologic Malignancies |
| NCT00269113 | PHASE3 | COMPLETED | A Study of MabThera (Rituximab) in Patients With Advanced Non-Hodgkin’s Lymphoma |
| NCT00312845 | PHASE3 | COMPLETED | Study of VELCADE and Rituximab in Patients With Relapsed or Refractory B-cell Non-Hodgkin’s Lymphoma |
| NCT00332202 | PHASE3 | COMPLETED | PRELUDE:Study to Investigate the Prevention of Relapse in Lymphoma Using Daily Enzastaurin |
| NCT00352846 | PHASE3 | COMPLETED | Effect of Zoledronic Acid on Chemotherapy Induced Bone Loss |
Drugs tested across these trials (top 30)
Precision-medicine subtype map (CIViC)
Drug × molecular subtype: 1 predictive associations from 2 curated evidence items.
| Molecular subtype | Therapy | Effect | Level | CIViC |
|---|---|---|---|---|
| EZH2 Y646F | Tazemetostat | Sensitivity/Response | CIViC D | EID11000 +1 |
Related Atlas pages
- Cohort genes: EZH2, BRAF, TP53, B2M, RAD54L, CASP10, LRRC41, RAD54B
- Drugs: Rituximab, Bendamustine, Plerixafor, 2-MERCAPTOETHANESULFONIC ACID, Obinutuzumab, Clofarabine, Doxorubicin, Mitoxantrone, Pegfilgrastim, Polatuzumab Vedotin, Ublituximab, Vincristine, Axicabtagene Ciloleucel, Brentuximab Vedotin, Ofatumumab, Belinostat, Bortezomib D-Mannitol, Fludarabine Phosphate, Palifermin, Pirtobrutinib, Romidepsin, Temsirolimus, Mosunetuzumab, Venetoclax, Alemtuzumab, Diphenhydramine, Etoposide Phosphate, Ibrutinib, Moxetumomab Pasudotox, Panobinostat, Tazemetostat