Noonan syndrome 8
disease diseaseOn this page
Also known as Noonan syndrome caused by mutation in RIT1Noonan syndrome type 8NS8RIT1 Noonan syndrome
Summary
Noonan syndrome 8 (MONDO:0014143) is a disease caused by RIT1 (GenCC Definitive), with 6 cohort genes.
At a glance
- Causal gene: RIT1 (GenCC Definitive)
- Cohort genes: 6
- ClinVar variants: 307
Clinical features
No curated clinical features (Orphanet) for this disease.
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | Noonan syndrome 8 |
| Mondo ID | MONDO:0014143 |
| OMIM | 615355 |
| DOID | DOID:0060586 |
| NCIT | C176936 |
| UMLS | C3809233 |
| MedGen | 815563 |
| GARD | 0015949 |
| Is cancer (heuristic) | no |
Also known as: Noonan syndrome 8 · Noonan syndrome caused by mutation in RIT1 · Noonan syndrome type 8 · NS8 · RIT1 Noonan syndrome
Data availability: 307 ClinVar variants · 4 GenCC gene-disease records.
Disease family
Classification path: disease › human disease › disease by body system or component › syndromic disease › Noonan syndrome › Noonan syndrome 8
Related subtypes (13): Noonan syndrome 1, Noonan syndrome 2, Noonan syndrome 3, Noonan syndrome 4, Noonan syndrome 5, Noonan syndrome 6, Noonan syndrome 7, Noonan syndrome 9, Noonan syndrome 10, Noonan syndrome 14, Noonan syndrome 11, noonan syndrome 12, Noonan syndrome 13
Genetics & variants
GWAS landscape
No GWAS associations recorded — common-variant (GWAS) studies don’t cover this disease (typical for Mendelian / rare diseases). See the curated gene cohort and Mendelian overlap below.
Variant details and genetic-evidence tiers
ClinVar germline variants
307 retrieved; paginated sample, class counts are floors:
136 uncertain significance, 108 likely benign, 20 conflicting classifications of pathogenicity, 17 pathogenic, 15 pathogenic/likely pathogenic, 4 benign, 4 likely pathogenic, 3 benign/likely benign
| ClinVar | Variant (HGVS) | Gene | Classification | Review |
|---|---|---|---|---|
| 2425657 | NC_000001.10:g.(?155581953)(155880552_?)del | DAP3 | Pathogenic | criteria provided, single submitter |
| 376489 | NM_006218.4(PIK3CA):c.1034A>C (p.Asn345Thr) | PIK3CA | Pathogenic | criteria provided, single submitter |
| 120250 | NM_006912.6(RIT1):c.270G>A (p.Met90Ile) | RIT1 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 1695891 | NM_006912.6(RIT1):c.67A>G (p.Lys23Glu) | RIT1 | Pathogenic | criteria provided, single submitter |
| 181522 | NM_006912.6(RIT1):c.246T>G (p.Phe82Leu) | RIT1 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 183401 | NM_006912.6(RIT1):c.104G>C (p.Ser35Thr) | RIT1 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 183403 | NM_006912.6(RIT1):c.229G>A (p.Ala77Thr) | RIT1 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 183404 | NM_006912.6(RIT1):c.241G>C (p.Glu81Gln) | RIT1 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 183405 | NM_006912.6(RIT1):c.242A>G (p.Glu81Gly) | RIT1 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 183406 | NM_006912.6(RIT1):c.244T>A (p.Phe82Ile) | RIT1 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 183407 | NM_006912.6(RIT1):c.244T>C (p.Phe82Leu) | RIT1 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 183408 | NM_006912.6(RIT1):c.244T>G (p.Phe82Val) | RIT1 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 183409 | NM_006912.6(RIT1):c.247A>C (p.Thr83Pro) | RIT1 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 183410 | NM_006912.6(RIT1):c.251C>T (p.Ala84Val) | RIT1 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 183411 | NM_006912.6(RIT1):c.265T>C (p.Tyr89His) | RIT1 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 190305 | NM_006912.6(RIT1):c.270G>C (p.Met90Ile) | RIT1 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 224122 | NM_006912.6(RIT1):c.67A>C (p.Lys23Gln) | RIT1 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 228289 | NM_006912.6(RIT1):c.229G>C (p.Ala77Pro) | RIT1 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 2431215 | NM_006912.6(RIT1):c.111G>C (p.Met37Ile) | RIT1 | Pathogenic | criteria provided, single submitter |
| 265328 | NM_006912.6(RIT1):c.270G>T (p.Met90Ile) | RIT1 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 280151 | NM_006912.6(RIT1):c.259G>C (p.Asp87His) | RIT1 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 280609 | NM_006912.6(RIT1):c.365G>T (p.Arg122Leu) | RIT1 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 3382471 | NM_006912.6(RIT1):c.269T>C (p.Met90Thr) | RIT1 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 370035 | NM_006912.6(RIT1):c.246T>A (p.Phe82Leu) | RIT1 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 372863 | NM_006912.6(RIT1):c.245T>G (p.Phe82Cys) | RIT1 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 561621 | NM_006912.6(RIT1):c.229G>T (p.Ala77Ser) | RIT1 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 561681 | NM_006912.6(RIT1):c.268A>G (p.Met90Val) | RIT1 | Pathogenic | reviewed by expert panel |
| 581105 | NM_006912.6(RIT1):c.69A>C (p.Lys23Asn) | RIT1 | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 60506 | NM_006912.6(RIT1):c.170C>G (p.Ala57Gly) | RIT1 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 60509 | NM_006912.6(RIT1):c.284G>C (p.Gly95Ala) | RIT1 | Pathogenic | criteria provided, multiple submitters, no conflicts |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 6 · Orphanet: 16 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
GenCC gene–disease validity (cohort genes)
the Disease column is the GenCC-asserted condition — a cohort gene’s strongest validity may be for a related predisposition syndrome.
| Gene | Classification | Inheritance | Disease | Records |
|---|---|---|---|---|
| RIT1 | Definitive | Autosomal dominant | Noonan syndrome | 6 |
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|---|---|
| RIT1 | Orphanet:648 | Noonan syndrome |
| PIK3CA | Orphanet:140944 | CLOVES syndrome |
| PIK3CA | Orphanet:144 | Lynch syndrome |
| PIK3CA | Orphanet:168984 | CLAPO syndrome |
| PIK3CA | Orphanet:201 | Cowden syndrome |
| PIK3CA | Orphanet:210159 | Adult hepatocellular carcinoma |
| PIK3CA | Orphanet:221061 | Familial cerebral cavernous malformation |
| PIK3CA | Orphanet:2495 | Meningioma |
| PIK3CA | Orphanet:276280 | Hemihyperplasia-multiple lipomatosis syndrome |
| PIK3CA | Orphanet:295239 | Macrodactyly of fingers, unilateral |
| PIK3CA | Orphanet:295243 | Macrodactyly of toes, unilateral |
| PIK3CA | Orphanet:314662 | Segmental progressive overgrowth syndrome with fibroadipose hyperplasia |
| PIK3CA | Orphanet:60040 | Megalencephaly-capillary malformation-polymicrogyria syndrome |
| PIK3CA | Orphanet:714737 | Diffuse capillary malformation with overgrowth |
| PIK3CA | Orphanet:90308 | Capillary-lymphatic-venous malformation with segmental distribution |
| PIK3CA | Orphanet:99802 | Hemimegalencephaly |
Cohort genes → proteins
6 cohort genes, 5 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|---|
| multi_evidence | 6 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|---|---|---|---|---|
| RIT1 | HGNC:10023 | ENSG00000143622 | Q92963 | GTP-binding protein Rit1 | gencc,clinvar |
| DAP3 | HGNC:2673 | ENSG00000132676 | P51398 | Small ribosomal subunit protein mS29 | clinvar |
| DLGAP3 | HGNC:30368 | ENSG00000116544 | O95886 | Disks large-associated protein 3 | clinvar |
| HSH2D-AS1 | HGNC:58332 | ENSG00000269243 | HSH2D and RAB8A antisense RNA 1 | clinvar | |
| ARHGEF2 | HGNC:682 | ENSG00000116584 | Q92974 | Rho guanine nucleotide exchange factor 2 | clinvar |
| PIK3CA | HGNC:8975 | ENSG00000121879 | P42336 | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform | clinvar |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|---|---|
| RIT1 | GTP-binding protein Rit1 | Plays a crucial role in coupling NGF stimulation to the activation of both EPHB2 and MAPK14 signaling pathways and in NGF-dependent neuronal differentiation. |
| DAP3 | Small ribosomal subunit protein mS29 | As a component of the mitochondrial small ribosomal subunit, it plays a role in the translation of mitochondrial mRNAs. |
| DLGAP3 | Disks large-associated protein 3 | May play a role in the molecular organization of synapses and neuronal cell signaling. |
| ARHGEF2 | Rho guanine nucleotide exchange factor 2 | Activates Rho-GTPases by promoting the exchange of GDP for GTP. |
| PIK3CA | Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform | Phosphoinositide-3-kinase (PI3K) phosphorylates phosphatidylinositol (PI) and its phosphorylated derivatives at position 3 of the inositol ring to produce 3-phosphoinositides. |
Protein-family classification
Druggable: 1 · Difficult: 1 · Unknown: 4 · Druggable fraction: 0.17
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|---|---|---|
| Kinase | 1 | 4.6× | 0.451 |
| Scaffold/PPI | 1 | 2.9× | 0.451 |
| Other/Unknown | 4 | 1.2× | 0.458 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|---|---|---|---|
| RIT1 | Other/Unknown | no | Small_GTPase, Small_GTP-bd, Small_GTPase_Ras-type | |
| DAP3 | Other/Unknown | no | Ribosomal_mS29_met, Ribosomal_mS29, P-loop_NTPase | |
| DLGAP3 | Other/Unknown | no | SAPAP | |
| HSH2D-AS1 | Other/Unknown | no | ||
| ARHGEF2 | Scaffold/PPI | no | DH_dom, PH_domain, PKC_DAG/PE | |
| PIK3CA | Kinase | yes | 2.7.1.137 | PI3K_Ras-bd_dom, PI3/4_kinase_cat_dom, PI3K_accessory_dom |
Expression context
Cohort genes with no expression data: 0.
4 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 0 |
| broad (>20) | 6 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|---|
| adrenal tissue | 2 |
| leukocyte | 1 |
| monocyte | 1 |
| mononuclear cell | 1 |
| body of pancreas | 1 |
| colonic epithelium | 1 |
| anterior cingulate cortex | 1 |
| nucleus accumbens | 1 |
| right frontal lobe | 1 |
| bone marrow cell | 1 |
| granulocyte | 1 |
| mucosa of transverse colon | 1 |
| corpus callosum | 1 |
| ganglionic eminence | 1 |
| inferior vagus X ganglion | 1 |
| calcaneal tendon | 1 |
| tendon | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|---|---|---|---|
| RIT1 | 268 | ubiquitous | marker | monocyte, mononuclear cell, leukocyte |
| DAP3 | 294 | ubiquitous | marker | body of pancreas, adrenal tissue, colonic epithelium |
| DLGAP3 | 150 | broad | yes | right frontal lobe, anterior cingulate cortex, nucleus accumbens |
| HSH2D-AS1 | 133 | yes | mucosa of transverse colon, granulocyte, bone marrow cell | |
| ARHGEF2 | 297 | ubiquitous | marker | inferior vagus X ganglion, ganglionic eminence, corpus callosum |
| PIK3CA | 284 | ubiquitous | marker | calcaneal tendon, adrenal tissue, tendon |
Protein interactions among cohort
Intra-cohort edges: 0.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|---|
| PIK3CA | 5,157 |
| DAP3 | 3,504 |
| RIT1 | 3,298 |
| ARHGEF2 | 2,202 |
| DLGAP3 | 1,613 |
| HSH2D-AS1 | 0 |
Structural data
PDB: 4 · AlphaFold-only: 1 · No structure: 1
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|---|---|
| PIK3CA | P42336 | 135 |
| DAP3 | P51398 | 77 |
| ARHGEF2 | Q92974 | 60 |
| RIT1 | Q92963 | 3 |
AlphaFold-only cohort genes (top 30 by pLDDT)
| Symbol | UniProt | pLDDT |
|---|---|---|
| DLGAP3 | O95886 | 50.83 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 82. Enrichment computed across 6 evidence-associated genes (5 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 5 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| Signalling to p38 via RIT and RIN | 1 | 456.8× | 0.026 | RIT1 |
| MET activates PI3K/AKT signaling | 1 | 380.7× | 0.026 | PIK3CA |
| Activated NTRK3 signals through PI3K | 1 | 380.7× | 0.026 | PIK3CA |
| Activated NTRK2 signals through PI3K | 1 | 326.3× | 0.026 | PIK3CA |
| Signaling by LTK in cancer | 1 | 326.3× | 0.026 | PIK3CA |
| PI3K/AKT activation | 1 | 253.8× | 0.026 | PIK3CA |
| IRS-mediated signalling | 1 | 207.6× | 0.026 | PIK3CA |
| PI3K events in ERBB4 signaling | 1 | 207.6× | 0.026 | PIK3CA |
| Co-stimulation by ICOS | 1 | 207.6× | 0.026 | PIK3CA |
| Signaling by FGFR4 in disease | 1 | 190.3× | 0.026 | PIK3CA |
| Erythropoietin activates Phosphoinositide-3-kinase (PI3K) | 1 | 190.3× | 0.026 | PIK3CA |
| Signaling by PDGFRA transmembrane, juxtamembrane and kinase domain mutants | 1 | 175.7× | 0.026 | PIK3CA |
| Signaling by PDGFRA extracellular domain mutants | 1 | 175.7× | 0.026 | PIK3CA |
| Signaling by LTK | 1 | 175.7× | 0.026 | PIK3CA |
| Signaling by FLT3 ITD and TKD mutants | 1 | 152.3× | 0.026 | PIK3CA |
| Constitutive Signaling by EGFRvIII | 1 | 142.8× | 0.026 | PIK3CA |
| PI3K events in ERBB2 signaling | 1 | 134.3× | 0.026 | PIK3CA |
| Signaling by ERBB2 ECD mutants | 1 | 134.3× | 0.026 | PIK3CA |
| GAB1 signalosome | 1 | 126.9× | 0.026 | PIK3CA |
| Signaling by cytosolic FGFR1 fusion mutants | 1 | 126.9× | 0.026 | PIK3CA |
| PI-3K cascade:FGFR3 | 1 | 126.9× | 0.026 | PIK3CA |
| Tie2 Signaling | 1 | 120.2× | 0.026 | PIK3CA |
| Role of LAT2/NTAL/LAB on calcium mobilization | 1 | 120.2× | 0.026 | PIK3CA |
| Constitutive Signaling by Ligand-Responsive EGFR Cancer Variants | 1 | 114.2× | 0.026 | PIK3CA |
| Signaling by ALK | 1 | 114.2× | 0.026 | PIK3CA |
| PI-3K cascade:FGFR4 | 1 | 114.2× | 0.026 | PIK3CA |
| Signaling by FLT3 fusion proteins | 1 | 114.2× | 0.026 | PIK3CA |
| PI-3K cascade:FGFR1 | 1 | 103.8× | 0.026 | PIK3CA |
| Signaling by phosphorylated juxtamembrane, extracellular and kinase domain KIT mutants | 1 | 103.8× | 0.026 | PIK3CA |
| PI-3K cascade:FGFR2 | 1 | 99.3× | 0.026 | PIK3CA |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 5 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| response to muscle inactivity | 1 | 3370.4× | 0.012 | PIK3CA |
| response to butyrate | 1 | 3370.4× | 0.012 | PIK3CA |
| response to L-leucine | 1 | 1123.5× | 0.014 | PIK3CA |
| asymmetric neuroblast division | 1 | 1123.5× | 0.014 | ARHGEF2 |
| cellular response to hydrostatic pressure | 1 | 1123.5× | 0.014 | PIK3CA |
| negative regulation of intrinsic apoptotic signaling pathway in response to osmotic stress | 1 | 842.6× | 0.015 | ARHGEF2 |
| negative regulation of actin filament depolymerization | 1 | 561.7× | 0.015 | PIK3CA |
| regulation of cellular respiration | 1 | 561.7× | 0.015 | PIK3CA |
| regulation of actin filament organization | 1 | 481.5× | 0.015 | PIK3CA |
| autosome genomic imprinting | 1 | 481.5× | 0.015 | PIK3CA |
| negative regulation of fibroblast apoptotic process | 1 | 481.5× | 0.015 | PIK3CA |
| modification of postsynaptic structure | 1 | 374.5× | 0.015 | DLGAP3 |
| cellular response to muramyl dipeptide | 1 | 337.0× | 0.015 | ARHGEF2 |
| cardiac muscle cell contraction | 1 | 337.0× | 0.015 | PIK3CA |
| positive regulation of protein localization to membrane | 1 | 337.0× | 0.015 | PIK3CA |
| signaling | 1 | 306.4× | 0.015 | DLGAP3 |
| TORC2 signaling | 1 | 306.4× | 0.015 | PIK3CA |
| phosphatidylinositol-3-phosphate biosynthetic process | 1 | 259.3× | 0.015 | PIK3CA |
| anoikis | 1 | 259.3× | 0.015 | PIK3CA |
| relaxation of cardiac muscle | 1 | 259.3× | 0.015 | PIK3CA |
| cellular hyperosmotic response | 1 | 240.7× | 0.015 | ARHGEF2 |
| response to dexamethasone | 1 | 240.7× | 0.015 | PIK3CA |
| vasculature development | 1 | 224.7× | 0.015 | PIK3CA |
| negative regulation of macroautophagy | 1 | 224.7× | 0.015 | PIK3CA |
| vascular endothelial growth factor signaling pathway | 1 | 210.7× | 0.015 | PIK3CA |
| negative regulation of necroptotic process | 1 | 198.3× | 0.015 | ARHGEF2 |
| positive regulation of neuron migration | 1 | 198.3× | 0.015 | ARHGEF2 |
| apoptotic mitochondrial changes | 1 | 177.4× | 0.015 | DAP3 |
| negative regulation of anoikis | 1 | 177.4× | 0.015 | PIK3CA |
| positive regulation of peptidyl-tyrosine phosphorylation | 1 | 160.5× | 0.016 | ARHGEF2 |
Therapeutics
Drug target analysis
Approved (phase 4): 1 · Phase ≥3: 1 · Phased (≥1): 2 · Undrugged: 4
Druggability breadth: 3 of 6 evidence-associated genes (50%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Genes with an approved drug
The molecule shown is one approved compound that hits the gene — not necessarily a drug of choice or one indicated for this disease.
| Symbol | Example approved molecule |
|---|---|
| PIK3CA | IDELALISIB |
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|---|---|
| PIK3CA | 67 | 4 |
| ARHGEF2 | 1 | 2 |
| RIT1 | 0 | 0 |
| DAP3 | 0 | 0 |
| DLGAP3 | 0 | 0 |
| HSH2D-AS1 | 0 | 0 |
Drugs targeting cohort genes (top 30)
| Molecule | Max phase | Targets in cohort |
|---|---|---|
| IDELALISIB | 4 | PIK3CA |
| ALPELISIB | 4 | PIK3CA |
| DUVELISIB | 4 | PIK3CA |
| COPANLISIB | 4 | PIK3CA |
| FEDRATINIB | 4 | PIK3CA |
| ROMIDEPSIN | 4 | PIK3CA |
| COPANLISIB HYDROCHLORIDE | 4 | PIK3CA |
| LENIOLISIB | 4 | PIK3CA |
| BELINOSTAT | 4 | PIK3CA |
| INAVOLISIB | 4 | PIK3CA |
| SUNITINIB | 4 | PIK3CA |
| DASATINIB | 4 | PIK3CA |
| CRIZOTINIB | 4 | PIK3CA |
| MIDOSTAURIN | 4 | PIK3CA |
| DACTOLISIB | 3 | PIK3CA |
| BUPARLISIB | 3 | PIK3CA |
| RESVERATROL | 3 | PIK3CA |
| IPATASERTIB | 3 | PIK3CA |
| TASELISIB | 3 | PIK3CA |
| EPIGALOCATECHIN GALLATE | 3 | PIK3CA |
| GEDATOLISIB | 3 | PIK3CA |
| LESTAURTINIB | 3 | PIK3CA |
| MOLIBRESIB | 2 | ARHGEF2 |
| OMIPALISIB | 2 | PIK3CA |
| VISTUSERTIB | 2 | PIK3CA |
| FIMEPINOSTAT | 2 | PIK3CA |
| EGANELISIB | 2 | PIK3CA |
| BERZOSERTIB | 2 | PIK3CA |
| BIMIRALISIB | 2 | PIK3CA |
| PICTILISIB | 2 | PIK3CA |
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 1.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|---|---|
| PIK3CA | 2,034 | Binding:2009, ADMET:19, Toxicity:4, Functional:2 |
| ARHGEF2 | 8 | Binding:8 |
| DAP3 | 2 | Binding:2 |
Cohort enzymes (BRENDA EC)
| Symbol | EC numbers | Names |
|---|---|---|
| PIK3CA | 2.7.1.137, 2.7.1.153, 2.7.11.1 | phosphatidylinositol 3-kinase, phosphatidylinositol-4,5-bisphosphate 3-kinase, non-specific serine/threonine protein kinase |
Cohort genes with high screening signal
≥100 ChEMBL assays — a studied-ness signal; see Therapeutics for approved-drug status.
| Symbol | ChEMBL assays |
|---|---|
| PIK3CA | 2,034 |
Pharmacogenomics
Cohort genes with a PharmGKB record: 5; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Chemical tractability of cohort targets
30 approved/phased compounds have measured bioactivity against a cohort gene (and aren’t yet in disease-level trials). This is a research / tractability signal, NOT a therapeutic recommendation — a bioactivity row often reflects off-target or screening binding (e.g. promiscuous kinase inhibitors against a cohort kinase), implying no disease mechanism.
| Compound | Max phase | Cohort target (bioactivity) |
|---|---|---|
| IDELALISIB | 4 | PIK3CA |
| ALPELISIB | 4 | PIK3CA |
| DUVELISIB | 4 | PIK3CA |
| COPANLISIB | 4 | PIK3CA |
| FEDRATINIB | 4 | PIK3CA |
| ROMIDEPSIN | 4 | PIK3CA |
| COPANLISIB HYDROCHLORIDE | 4 | PIK3CA |
| LENIOLISIB | 4 | PIK3CA |
| BELINOSTAT | 4 | PIK3CA |
| INAVOLISIB | 4 | PIK3CA |
| SUNITINIB | 4 | PIK3CA |
| DASATINIB | 4 | PIK3CA |
| CRIZOTINIB | 4 | PIK3CA |
| MIDOSTAURIN | 4 | PIK3CA |
| DACTOLISIB | 3 | PIK3CA |
| BUPARLISIB | 3 | PIK3CA |
| RESVERATROL | 3 | PIK3CA |
| IPATASERTIB | 3 | PIK3CA |
| TASELISIB | 3 | PIK3CA |
| EPIGALOCATECHIN GALLATE | 3 | PIK3CA |
| GEDATOLISIB | 3 | PIK3CA |
| LESTAURTINIB | 3 | PIK3CA |
| MOLIBRESIB | 2 | ARHGEF2 |
| OMIPALISIB | 2 | PIK3CA |
| VISTUSERTIB | 2 | PIK3CA |
| FIMEPINOSTAT | 2 | PIK3CA |
| EGANELISIB | 2 | PIK3CA |
| BERZOSERTIB | 2 | PIK3CA |
| BIMIRALISIB | 2 | PIK3CA |
| PICTILISIB | 2 | PIK3CA |
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|---|---|---|
| A | Approved (phase 4 drug) | 1 | PIK3CA |
| B | Phased (≥1) drug, not yet approved | 1 | ARHGEF2 |
| C | Druggable family + PDB, no drug | 0 | |
| D | Druggable family + AlphaFold only, no drug | 0 | |
| E | Difficult family or no structure, no drug | 4 | RIT1, DAP3, DLGAP3, HSH2D-AS1 |
Undrugged target profiles
4 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
| Symbol | ChEMBL assays | Drugged partners (top 3) |
|---|---|---|
| RIT1 | 0 | — |
| DAP3 | 2 | — |
| DLGAP3 | 0 | — |
| HSH2D-AS1 | 0 | — |
Clinical trials & evidence
Clinical trials
Clinical trials: 0.