Noonan syndrome

disease
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Also known as Noonan's syndromeNoonan-Ehmke syndromepseudo-Ullrich-Turner syndromeUllrich-Noonan syndrome

Summary

Noonan syndrome (MONDO:0018997) is a disease (an umbrella term covering 14 Mondo subtypes) caused by variants in KRAS, LZTR1, NRAS, and 7 other genes, with 29 cohort genes and 27 clinical trials. The dominant Reactome pathway is RAF activation (10 cohort genes). Top therapeutic interventions include somatropin, somapacitan, and vosoritide.

At a glance

  • Prevalence: 1-5 / 10 000 (Worldwide) [Orphanet-validated]
  • Causal genes: KRAS (GenCC Definitive), LZTR1 (GenCC Definitive), NRAS (GenCC Definitive), PTPN11 (GenCC Definitive) (+6 more)
  • Umbrella term: 14 Mondo subtypes
  • Cohort genes: 29
  • ClinVar variants: 719
  • Phenotypes (HPO): 70
  • Clinical trials: 27

Clinical features

Epidemiology

Prevalence records

2 prevalence record(s), Orphanet:

TypeClassValueGeographyValidation
Point prevalence1-5 / 10 000WorldwideValidated
Prevalence at birth6-9 / 10 00070United StatesValidated

Signs & symptoms

Clinical features (HPO)

70 HPO clinical features (Orphanet curated; top 50 by frequency):

HPO IDTermFrequency
HP:0001382Joint hypermobilityVery frequent (80-99%)
HP:0000044Hypogonadotropic hypogonadismVery frequent (80-99%)
HP:0000179Thick lower lip vermilionVery frequent (80-99%)
HP:0000218High palateVery frequent (80-99%)
HP:0000316HypertelorismVery frequent (80-99%)
HP:0000325Triangular faceVery frequent (80-99%)
HP:0000347MicrognathiaVery frequent (80-99%)
HP:0000348High foreheadVery frequent (80-99%)
HP:0000391Thickened helicesVery frequent (80-99%)
HP:0000465Webbed neckVery frequent (80-99%)
HP:0000474Thickened nuchal skin foldVery frequent (80-99%)
HP:0000476Cystic hygromaVery frequent (80-99%)
HP:0000494Downslanted palpebral fissuresVery frequent (80-99%)
HP:0000508PtosisVery frequent (80-99%)
HP:0000520ProptosisVery frequent (80-99%)
HP:0000767Pectus excavatumVery frequent (80-99%)
HP:0000768Pectus carinatumVery frequent (80-99%)
HP:0001260DysarthriaVery frequent (80-99%)
HP:0001324Muscle weaknessVery frequent (80-99%)
HP:0002167Abnormality of speech or vocalizationVery frequent (80-99%)
HP:0003115Abnormal EKGVery frequent (80-99%)
HP:0004322Short statureVery frequent (80-99%)
HP:0004415Pulmonary artery stenosisVery frequent (80-99%)
HP:0006610Wide intermamillary distanceVery frequent (80-99%)
HP:0010318Aplasia/Hypoplasia of the abdominal wall musculatureVery frequent (80-99%)
HP:0011800Midface retrusionVery frequent (80-99%)
HP:0030680Abnormal cardiovascular system morphologyVery frequent (80-99%)
HP:0100625Enlarged thoraxVery frequent (80-99%)
HP:0000358Posteriorly rotated earsVery frequent (80-99%)
HP:0001641Abnormal pulmonary valve morphologyFrequent (30-79%)
HP:0001743Abnormality of the spleenFrequent (30-79%)
HP:0001892Abnormal bleedingFrequent (30-79%)
HP:0001928Abnormality of coagulationFrequent (30-79%)
HP:0002162Low posterior hairlineFrequent (30-79%)
HP:0002208Coarse hairFrequent (30-79%)
HP:0002240HepatomegalyFrequent (30-79%)
HP:0002650ScoliosisFrequent (30-79%)
HP:0002750Delayed skeletal maturationFrequent (30-79%)
HP:0007477Abnormal dermatoglyphicsFrequent (30-79%)
HP:0008872Feeding difficulties in infancyFrequent (30-79%)
HP:0011362Abnormal hair quantityFrequent (30-79%)
HP:0011675ArrhythmiaFrequent (30-79%)
HP:0011869Abnormal platelet functionFrequent (30-79%)
HP:0012758Neurodevelopmental delayFrequent (30-79%)
HP:0100763Abnormality of the lymphatic systemFrequent (30-79%)
HP:0000028CryptorchidismFrequent (30-79%)
HP:0000078Abnormality of the genital systemFrequent (30-79%)
HP:0000486StrabismusFrequent (30-79%)
HP:0000635Blue iridesFrequent (30-79%)
HP:0001252HypotoniaFrequent (30-79%)

Identifiers

Disease identifiers

FieldValue
Canonical nameNoonan syndrome
Mondo IDMONDO:0018997
MeSHD009634
OMIM163950
Orphanet648
DOIDDOID:3490
ICD-111044395354
NCITC34854
SNOMED CT205824006
UMLSC0028326
MedGen18073
GARD0010955
MedDRA10029748
NORD1513
Is cancer (heuristic)no

Also known as: Noonan syndrome · Noonan’s syndrome · Noonan-Ehmke syndrome · pseudo-Ullrich-Turner syndrome · Ullrich-Noonan syndrome

Data availability: 719 ClinVar variants · 20 ClinGen variant curations · 38 GenCC gene-disease records · 23 cell lines.

Disease family

An umbrella term covering 14 Mondo subtypes.

Classification path: disease › human disease › disease by body system or component › syndromic diseaseNoonan syndrome

Related subtypes (1183): Neu-Laxova syndrome, inclusion body myopathy with Paget disease of bone and frontotemporal dementia, syndromic intellectual disability, abdominal obesity-metabolic syndrome, fibrogenesis imperfecta ossium, Fanconi renotubular syndrome, palindromic rheumatism, hepatorenal syndrome, Potter sequence, vertebral artery insufficiency, sick sinus syndrome, Tietze syndrome, toxic shock syndrome, capillary leak syndrome, dumping syndrome, FG syndrome, basilar artery insufficiency, long QT syndrome, Treacher-Collins syndrome, superior mesenteric artery syndrome, disappearing bone disease, Brown-Sequard syndrome, Froelich syndrome, diffuse infiltrative lymphocytosis syndrome, Capgras syndrome, compartment syndrome, central sleep apnea syndrome, irritable bowel syndrome, nephrotic syndrome, myalgic encephalomeyelitis/chronic fatigue syndrome, acute coronary syndrome, fibromyalgia, substance withdrawal syndrome, acute chest syndrome, Barre-Lieou syndrome, cauda equina syndrome, Kluver-Bucy syndrome, Miller Fisher syndrome, persian gulf syndrome, Reye syndrome, thoracic outlet syndrome, Waterhouse-Friderichsen syndrome, Wissler syndrome, acute respiratory distress syndrome, Achenbach syndrome, miliaria, anterior spinal artery syndrome, burning mouth syndrome, dry eye syndrome, empty sella syndrome, euthyroid sick syndrome, lateral medullary syndrome, subclavian steal syndrome, tarsal tunnel syndrome, tethered spinal cord syndrome, branchio-oto-renal syndrome, prune belly syndrome, Achard syndrome, alopecia-epilepsy-pyorrhea-intellectual disability syndrome, Finnish type amyloidosis, Angelman syndrome, aniridia-absent patella syndrome, ankyloblepharon filiforme adnatum-cleft palate syndrome, Townes-Brocks syndrome, obstructive sleep apnea syndrome, Lown-Ganong-Levine syndrome, Behcet disease, brachydactyly-arterial hypertension syndrome, brachydactyly type A2, fibular aplasia-ectrodactyly syndrome, brachydactyly-nystagmus-cerebellar ataxia syndrome, Sillence syndrome, Brachymorphism-onychodysplasia-dysphalangism syndrome, brachytelephalangy-dysmorphism-Kallmann syndrome, dilated cardiomyopathy 1A, cat-eye syndrome, cerebrocostomandibular syndrome, Alagille syndrome, autosomal dominant chondrodysplasia punctata, cleidocranial dysplasia 1, cleidorhizomelic syndrome, cochleosaccular degeneration-cataract syndrome, renal coloboma syndrome, Cri-du-chat syndrome, autosomal dominant deafness - onychodystrophy syndrome, cerebral arteriopathy with subcortical infarcts and leukoencephalopathy, Duane retraction syndrome, 3-M syndrome, dyschondrosteosis-nephritis syndrome, hereditary benign intraepithelial dyskeratosis, encephalopathy, recurrent, of childhood, Camurati-Engelmann disease, Felty syndrome, chromosome 16p12.1 deletion syndrome, 520kb, Frasier syndrome, Gamstorp-Wohlfart syndrome, Tourette syndrome, glaucoma-sleep apnea syndrome, renal cysts and diabetes syndrome, hypotrichosis-lymphedema-telangiectasia syndrome (grouping), GMS syndrome, gray platelet syndrome, hand-foot-genital syndrome, facial hemiatrophy, Bencze syndrome, alpha thalassemia-intellectual disability syndrome type 1, Gilbert syndrome, mullerian duct anomalies-limb anomalies syndrome, hypoparathyroidism-deafness-renal disease syndrome, chromosome 18p deletion syndrome, Pallister-Hall syndrome, ichthyosis-cheek-eyebrow syndrome, Jacobsen syndrome, palmoplantar keratoderma-hereditary motor and sensory neuropathy syndrome, palmoplantar keratoderma-esophageal carcinoma syndrome, Kleine-Levin syndrome, angioosteohypertrophic syndrome, congenital laryngeal web, Lenz-Majewski hyperostotic dwarfism, Noonan syndrome with multiple lentigines, lymphedema-cerebral arteriovenous anomaly syndrome, microcephaly with or without chorioretinopathy, lymphedema, or intellectual disability, yellow nail syndrome, lymphedema-distichiasis syndrome, Nager acrofacial dysostosis, jaw-winking syndrome, Marfan syndrome, Melkersson-Rosenthal syndrome, metaphyseal chondrodysplasia, Jansen type, Schmid metaphyseal chondrodysplasia, metaphyseal dysplasia-maxillary hypoplasia-brachydacty syndrome, microgastria-limb reduction defect syndrome, Mobius syndrome, muscular atrophy-ataxia-retinitis pigmentosa-diabetes mellitus syndrome, nail-patella syndrome, Schilbach-Rott syndrome, syndromic orbital border hypoplasia, Buschke-Ollendorff syndrome, nasopalpebral lipoma-coloboma syndrome, Perry syndrome, Poland syndrome, polydactyly-myopia syndrome, Greig cephalopolysyndactyly syndrome, Prader-Willi syndrome, Guttmacher syndrome, Currarino triad, Hutchinson-Gilford progeria syndrome, progeria-short stature-pigmented nevi syndrome, Liddle syndrome, exfoliation syndrome, ptosis-strabismus-ectopic pupils syndrome, radial hypoplasia-triphalangeal thumbs-hypospadias-maxillary diastema syndrome, radial ray hypoplasia-choanal atresia syndrome, Roussy-Levy syndrome, Silver-Russell syndrome, Ruvalcaba syndrome, oculodental syndrome, Rutherfurd type, aplasia of lacrimal and salivary glands, scalp defects-postaxial polydactyly syndrome, ulnar-mammary syndrome, septooptic dysplasia, Czeizel-Losonci syndrome, polycystic ovary syndrome, stiff-person syndrome, syndactyly-polydactyly-ear lobe syndrome, HELLP syndrome, double uterus-hemivagina-renal agenesis syndrome, VACTERL/vater association, posterior fusion of lumbosacral vertebrae-blepharoptosis syndrome, ptosis-vocal cord paralysis syndrome, Freeman-Sheldon syndrome, Williams syndrome, Denys-Drash syndrome, Wolf-Hirschhorn syndrome, ablepharon macrostomia syndrome, acrocallosal syndrome, PAGOD syndrome, alopecia - intellectual disability syndrome, mitochondrial DNA depletion syndrome 4a, Alstrom syndrome, aniridia-cerebellar ataxia-intellectual disability syndrome, aniridia-renal agenesis-psychomotor retardation syndrome, aplasia cutis congenita-intestinal lymphangiectasia syndrome, fetal akinesia deformation sequence, blepharophimosis-ptosis-esotropia-syndactyly-short stature syndrome, Bloom syndrome, Elsahy-Waters syndrome, campomelia, Cumming type, camptomelic syndrome, long-limb type, congenital cataract-ichthyosis syndrome, colobomatous optic disc-macular atrophy-chorioretinopathy syndrome, hepatic fibrosis-renal cysts-intellectual disability syndrome, Charcot-Marie-Tooth disease-hearing loss-intellectual disability syndrome, CHARGE syndrome, Aagenaes syndrome, infantile choroidocerebral calcification syndrome, Yunis-Varon syndrome, corneal dystrophy-perceptive deafness syndrome, cortical blindness-intellectual disability-polydactyly syndrome, Crigler-Najjar syndrome, cataract-nephropathy-encephalopathy syndrome, Fraser syndrome, cystic fibrosis-gastritis-megaloblastic anemia syndrome, cystinuria, DOORS syndrome, high myopia-sensorineural deafness syndrome, dermochondrocorneal dystrophy, nephrogenic diabetes insipidus-intracranial calcification syndrome, diverticulosis of bowel, hernia, and retinal detachment, Dyggve-Melchior-Clausen disease, cerebellar ataxia, intellectual disability, and dysequilibrium, ectrodactyly-polydactyly syndrome, Bonnemann-Meinecke-Reich syndrome, epidermolysis bullosa simplex 5B, with muscular dystrophy, Wolcott-Rallison syndrome, ermine phenotype, eyebrow duplication-syndactyly syndrome, Fanconi-like syndrome, gingival fibromatosis-facial dysmorphism syndrome, frontofacionasal dysplasia, Fryns syndrome, German syndrome, Bernard-Soulier syndrome, triple-A syndrome, Grubben-de Cock-Borghgraef syndrome, mullerian derivatives-lymphangiectasia-polydactyly syndrome, Hirschsprung disease-hearing loss-polydactyly syndrome, Hirschsprung disease-nail hypoplasia-dysmorphism syndrome, Holzgreve-Wagner-Rehder syndrome, multinucleated neurons-anhydramnios-renal dysplasia-cerebellar hypoplasia-hydranencephaly syndrome, growth delay-hydrocephaly-lung hypoplasia syndrome, Dubin-Johnson syndrome, ornithine translocase deficiency, acrofrontofacionasal dysostosis 2, hypertrichotic osteochondrodysplasia Cantu type, hypergonadotropic hypogonadism-cataract syndrome, primary hypergonadotropic hypogonadism-partial alopecia syndrome, hypoparathyroidism-retardation-dysmorphism syndrome, hypospadias-intellectual disability, Goldblatt type syndrome, Bamforth-Lazarus syndrome, ichthyosis-hepatosplenomegaly-cerebellar degeneration syndrome, ichthyosis-intellectual disability-dwarfism-renal impairment syndrome, Vici syndrome, channelopathy-associated congenital insensitivity to pain, autosomal recessive, Joubert syndrome with oculorenal defect, oculocerebrofacial syndrome, Kaufman type, Landau-Kleffner syndrome, laryngo-onycho-cutaneous syndrome, Laurence-Moon syndrome, Donohue syndrome, Miller-Dieker lissencephaly syndrome, Marinesco-Sjogren syndrome, Frank-Ter Haar syndrome, Mietens syndrome, mesomelic dwarfism-cleft palate-camptodactyly syndrome, metaphyseal chondrodysplasia-retinitis pigmentosa syndrome, metaphyseal dysostosis-intellectual disability-conductive deafness syndrome, microcephalic primordial dwarfism, Toriello type, Say-Barber-Miller syndrome, microcephaly and chorioretinopathy 1, Galloway-Mowat syndrome, microtia with meatal atresia and conductive deafness, mucopolysaccharidosis type 6, mulibrey nanism, lethal multiple pterygium syndrome, lethal congenital contracture syndrome 1, Schwartz-Jampel syndrome, Nathalie syndrome, nephronophthisis 1, nephropathy - deafness - hyperparathyroidism syndrome, nephrosis-deafness-urinary tract-digital malformations syndrome, Netherton syndrome, Norman-Roberts syndrome, cloacal exstrophy, ichthyosis-oral and digital anomalies syndrome, Primrose syndrome, familial osteodysplasia, Anderson type, multicentric osteolysis, nodulosis, and arthropathy, osteopenia-intellectual disability-sparse hair syndrome, osteoporosis-pseudoglioma syndrome, Shwachman-Diamond syndrome, Parana hard-skin syndrome, PEHO syndrome, Imerslund-Grasbeck syndrome, Peters plus syndrome, pili torti-developmental delay-neurological abnormalities syndrome, Rabson-Mendenhall syndrome, postaxial acrofacial dysostosis, Gitelman syndrome, Wiedemann-Rautenstrauch syndrome, Acrootoocular syndrome, holoprosencephaly-postaxial polydactyly syndrome, autosomal recessive multiple pterygium syndrome, Perlman syndrome, retinitis pigmentosa-intellectual disability-deafness-hypogenitalism syndrome, EEC syndrome, SHORT syndrome, Sjogren syndrome, spastic tetraplegia-retinitis pigmentosa-intellectual disability syndrome, corneal-cerebellar syndrome, spastic ataxia-corneal dystrophy syndrome, spondylocostal dysostosis-anal and genitourinary malformations syndrome, familial infantile bilateral striatal necrosis, subaortic stenosis-short stature syndrome, thrombocytopenia-absent radius syndrome, thyrocerebrorenal syndrome, Pendred syndrome, VACTERL with hydrocephalus, Weaver syndrome, Werner syndrome, Wernicke-Korsakoff syndrome, wooly hair-hypotrichosis-everted lower lip-outstanding ears syndrome, de Sanctis-Cacchione syndrome, corpus callosum agenesis-abnormal genitalia syndrome, Alport syndrome-intellectual disability-midface hypoplasia-elliptocytosis syndrome, X-linked lissencephaly with abnormal genitalia, X-linked myotubular myopathy-abnormal genitalia syndrome, Christianson syndrome, Armfield syndrome, Lesch-Nyhan syndrome, Atkin-Flaitz syndrome, alpha-thalassemia-myelodysplastic syndrome, deafness-intellectual disability, Martin-Probst type syndrome, fragile X-associated tremor/ataxia syndrome, fragile X syndrome, syndactyly-telecanthus-anogenital and renal malformations syndrome, X-linked dominant chondrodysplasia, Chassaing-Lacombe type, X-linked central congenital hypothyroidism with late-onset testicular enlargement, Meester-Loeys syndrome, Arts syndrome, X-linked mandibulofacial dysostosis, Abruzzo-Erickson syndrome, Aicardi syndrome, craniofrontonasal syndrome, deafness-hypogonadism syndrome, X-linked corneal dermoid, immune dysregulation-polyendocrinopathy-enteropathy-X-linked syndrome, hydrocephaly-cerebellar agenesis syndrome, keratosis follicularis-dwarfism-cerebral atrophy syndrome, laryngeal abductor paralysis-intellectual disability syndrome, oculocerebrorenal syndrome, Menkes disease, paraplegia-intellectual disability-hyperkeratosis syndrome, mucopolysaccharidosis type 2, orofaciodigital syndrome I, otopalatodigital syndrome type 1, Pallister-W syndrome, Rett syndrome, SCARF syndrome, Simpson-Golabi-Behmel syndrome, torticollis-keloids-cryptorchidism-renal dysplasia syndrome, trigonocephaly-short stature-developmental delay syndrome, ulnar hypoplasia-split foot syndrome, van den Bosch syndrome, Wildervanck syndrome, Kearns-Sayre syndrome, MELAS syndrome, MERRF syndrome, Pearson syndrome, proximal tubulopathy-diabetes mellitus-cerebellar ataxia syndrome, pancreatic hypoplasia-diabetes-congenital heart disease syndrome, chondrodysplasia-pseudohermaphroditism syndrome, Qazi Markouizos syndrome, familial developmental dysphasia, atrioventricular defect-blepharophimosis-radial and anal defect syndrome, CODAS syndrome, lethal hemolytic anemia-genital anomalies syndrome, HEC syndrome, anophthalmia plus syndrome, infundibulopelvic stenosis-multicystic kidney syndrome, Ayme-Gripp syndrome, dilated cardiomyopathy 1E, diaphragmatic defect-limb deficiency-skull defect syndrome, skeletal dysplasia-epilepsy-short stature syndrome, Potocki-Shaffer syndrome, amelia cleft lip palate hydrocephalus iris coloboma, human HOXA1 syndromes, dyssegmental dysplasia-glaucoma syndrome, lung agenesis-heart defect-thumb anomalies syndrome, tetrasomy 12p, chromosome 18q deletion syndrome, lymphedema-atrial septal defects-facial changes syndrome, infantile convulsions and choreoathetosis, RHYNS syndrome, Pierre Robin sequence with pectus excavatum and rib and scapular anomalies, colobomatous macrophthalmia-microcornea syndrome, Marshall-Smith syndrome, distal monosomy 13q, MPI-congenital disorder of glycosylation, camptodactyly, myopia, and fibrosis of the medial rectus muscle of eye, radioulnar synostosis-microcephaly-scoliosis syndrome, blepharophimosis - intellectual disability syndrome, SBBYS type, complex regional pain syndrome type 1, temtamy preaxial brachydactyly syndrome, Diamond-Blackfan anemia 2, genitopatellar syndrome, Phelan-McDermid syndrome, hypotonia-cystinuria syndrome, DNA ligase IV deficiency, Hurler syndrome, Hurler-Scheie syndrome, Scheie syndrome, Duane-radial ray syndrome, psoriatic arthritis, neonatal ichthyosis-sclerosing cholangitis syndrome, skin fragility-woolly hair-palmoplantar keratoderma syndrome, tubulointerstitial nephritis and uveitis syndrome, caudal duplication, sweet syndrome, ichthyosis prematurity syndrome, Meacham syndrome, BNAR syndrome, PCWH syndrome, foveal hypoplasia - optic nerve decussation defect - anterior segment dysgenesis syndrome, B-cell immunodeficiency, distal limb anomalies, and urogenital malformations, MEDNIK syndrome, Cerebrorenodigital syndrome, fetal valproate syndrome, Goldberg-Shprintzen syndrome, Al-Gazali syndrome, CEDNIK syndrome, osteosclerosis-ichthyosis-premature ovarian failure syndrome, cortical dysplasia-focal epilepsy syndrome, DK1-congenital disorder of glycosylation, Potocki-Lupski syndrome, Pitt-Hopkins syndrome, XFE progeroid syndrome, deafness-infertility syndrome, COG1-congenital disorder of glycosylation, autosomal dominant familial hematuria-retinal arteriolar tortuosity-contractures syndrome, microtia-eye coloboma-imperforation of the nasolacrimal duct syndrome, mitochondrial DNA depletion syndrome, encephalomyopathic form with methylmalonic aciduria, ANE syndrome, CLOVES syndrome, Hirschsprung disease-ganglioneuroblastoma syndrome, parkinsonism-dystonia, infantile, alpha 1-antitrypsin deficiency, COG5-congenital disorder of glycosylation, chromosome 13q14 deletion syndrome, deafness-lymphedema-leukemia syndrome, microcephaly-capillary malformation syndrome, EDICT syndrome, peripheral neuropathy-myopathy-hoarseness-hearing loss syndrome, hypomyelinating leukodystrophy 8 with or without oligodontia and-or hypogonadotropic hypogonadism, IMAGe syndrome, short stature-onychodysplasia-facial dysmorphism-hypotrichosis syndrome, microcephalic primordial dwarfism, Alazami type, intellectual disability-strabismus syndrome, estrogen resistance syndrome, Hartsfield-Bixler-Demyer syndrome, severe dermatitis-multiple allergies-metabolic wasting syndrome, alacrima, achalasia, and intellectual disability syndrome, familial episodic pain syndrome with predominantly lower limb involvement, congenital microcephaly - severe encephalopathy - progressive cerebral atrophy syndrome, diffuse cerebral and cerebellar atrophy - intractable seizures - progressive microcephaly syndrome, postaxial polydactyly-anterior pituitary anomalies-facial dysmorphism syndrome, tall stature-scoliosis-macrodactyly of the great toes syndrome, intellectual disability, autosomal dominant 29, intellectual disability, autosomal dominant 30, congenital sideroblastic anemia-B-cell immunodeficiency-periodic fever-developmental delay syndrome, retinitis pigmentosa-juvenile cataract-short stature-intellectual disability syndrome, polyendocrine-polyneuropathy syndrome, chronic atrial and intestinal dysrhythmia, motor developmental delay due to 14q32.2 paternally expressed gene defect, peeling skin-leukonuchia-acral punctate keratoses-cheilitis-knuckle pads syndrome, mandibulofacial dysostosis with alopecia, epilepsy with myoclonic atonic seizures, short stature, microcephaly, and endocrine dysfunction, progressive microcephaly-seizures-cortical blindness-developmental delay syndrome, PMP22-RAI1 contiguous gene duplication syndrome, acute infantile liver failure-cerebellar ataxia-peripheral sensory motor neuropathy syndrome, familial progressive retinal dystrophy-iris coloboma-congenital cataract syndrome, macrothrombocytopenia-lymphedema-developmental delay-facial dysmorphism-camptodactyly syndrome, Luscan-Lumish syndrome, even-plus syndrome, MIRAGE syndrome, growth retardation, intellectual developmental disorder, hypotonia, and hepatopathy, intellectual disability-epilepsy-extrapyramidal syndrome, 48,XXYY syndrome, FRAXF syndrome, complex hereditary spastic paraplegia, aniridia-ptosis-intellectual disability-familial obesity syndrome, aniridia - intellectual disability syndrome, ankyloblepharon filiforme-imperforate anus syndrome, pentasomy X, Bardet-Biedl syndrome, anophthalmia-megalocornea-cardiopathy-skeletal anomalies syndrome, Bartter syndrome, arachnodactyly-intellectual disability-dysmorphism syndrome, ataxia-photosensitivity-short stature syndrome, Brugada syndrome, Feingold syndrome, cardiomyopathy-cataract-hip spine disease syndrome, cataract - microcornea syndrome, autism-facial port-wine stain syndrome, cataract-intellectual disability-anal atresia-urinary defects syndrome, cataract-deafness-hypogonadism syndrome, syndromic craniosynostosis, drug rash with eosinophilia and systemic symptoms, multicentric reticulohistiocytosis, hereditary sensory and autonomic neuropathy with deafness and global delay, craniofacial microsomia, ring chromosome 10, Coffin-Siris syndrome, corpus callosum agenesis-double urinary collecting system syndrome, short rib-polydactyly syndrome, oromandibular-limb anomalies syndrome, hemophagocytic syndrome, cataract-glaucoma syndrome, diencephalic syndrome, hypereosinophilic syndrome, distal trisomy 14q, intellectual disability-cataracts-kyphosis syndrome, progressive familial intrahepatic cholestasis, thoraco-abdominal enteric duplication, oculomaxillofacial dysostosis, growth hormone insensitivity syndrome, syndromic dyslipidemia, macrothrombocytopenia and granulocyte inclusions with or without nephritis or sensorineural hearing loss, epiphyseal dysplasia-hearing loss-dysmorphism syndrome, eosinophilic granulomatosis with polyangiitis, axial mesodermal dysplasia spectrum, fetal hydantoin syndrome, vitamin K-antagonist embryofetopathy, fetal alcohol syndrome, methimazole embryofetopathy, Evans syndrome, Cornelia de Lange syndrome, cleft lip-retinopathy syndrome, cleft lip/palate-deafness-sacral lipoma syndrome, Crandall syndrome, syndromic microphthalmia, Cole-Carpenter syndrome, myotonic syndrome, Guillain-Barre syndrome, atypical hemolytic-uremic syndrome, Hennekam syndrome, Hernández-Aguirre Negrete syndrome, nodular neuronal heterotopia, Hirschsprung disease-type D brachydactyly syndrome, holoprosencephaly, hydrocephalus-obesity-hypogonadism syndrome, hydrocephalus-blue sclerae-nephropathy syndrome, xeroderma pigmentosum-Cockayne syndrome complex, Joubert syndrome with ocular defect, hypogonadism-mitral valve prolapse-intellectual disability syndrome, hypogonadotropic hypogonadism-retinitis pigmentosa syndrome, hypotrichosis-intellectual disability, Lopes type, congenital ichthyosis-microcephalus-tetraplegia syndrome, Hughes-Stovin syndrome, heart-hand syndrome, ptosis-upper ocular movement limitation-absence of lacrimal punctum syndrome, syndromic agammaglobulinemia, isotretinoin syndrome, microcornea-posterior megalolenticonus-persistent fetal vasculature-coloboma syndrome, Kabuki syndrome, Kenny-Caffey syndrome, muscular pseudohypertrophy-hypothyroidism syndrome, Kousseff syndrome, limb body wall complex, Lennox-Gastaut syndrome, Lowe-Kohn-Cohen syndrome, macrocephaly-short stature-paraplegia syndrome, primary ciliary dyskinesia, familial intestinal malrotation-facial anomalies syndrome, primary hypertrophic osteoarthropathy, Melhem-Fahl syndrome, lower limb deficiency-hypospadias syndrome, 8p23.1 microdeletion syndrome, sickle cell-beta-thalassemia disease syndrome, sickle cell-hemoglobin c disease syndrome, sickle cell-hemoglobin d disease syndrome, sickle cell-hemoglobin E disease syndrome, hereditary persistence of fetal hemoglobin-sickle cell disease syndrome, microcephaly-brain defect-spasticity-hypernatremia syndrome, microcephaly-microcornea syndrome, Seemanova type, Meier-Gorlin syndrome, Mikati-Najjar-Sahli syndrome, shoulder and girdle defects-familial intellectual disability syndrome, myopathy-growth delay-intellectual disability-hypospadias syndrome, Fuchs heterochromic iridocyclitis, microcephalic osteodysplastic primordial dwarfism types I and III, osteochondrodysplatic nanism-deafness-retinitis pigmentosa syndrome, arthrogryposis-renal dysfunction-cholestasis syndrome, oculo-skeletal-renal syndrome, olivopontocerebellar atrophy-deafness syndrome, Opitz G/BBB syndrome, imperforate oropharynx-costo vetebral anomalies syndrome, Bruck syndrome, osteoporosis-macrocephaly-blindness-joint hyperlaxity syndrome, calciphylaxis, recessive intellectual disability-motor dysfunction-multiple joint contractures syndrome, X-linked ichthyosis syndrome, autoimmune polyendocrinopathy, renal caliceal diverticuli-deafness syndrome, tempi syndrome, syndromic oculocutaneous albinism, short stature-deafness-neutrophil dysfunction-dysmorphism syndrome, congenital varicella syndrome, polyneuropathy-intellectual disability-acromicria-premature menopause syndrome, celiac trunk compression syndrome, hypoplastic pancreas-intestinal atresia-hypoplastic gallbalder syndrome, fetal cytomegalovirus syndrome, Reunion island Larsen syndrome, 46,XX disorder of sex development-anorectal anomalies syndrome, mitochondrial neurogastrointestinal encephalomyopathy, Baraitser-Winter cerebrofrontofacial syndrome, mirror polydactyly-vertebral segmentation-limbs defects syndrome, intellectual disability-hypotonia-skin hyperpigmentation syndrome, congenital hereditary facial paralysis-variable hearing loss syndrome, intellectual disability-microcephaly-phalangeal-facial abnormalities syndrome, Mayer-Rokitansky-Kuster-Hauser syndrome, developmental and speech delay due to SOX5 deficiency, Spigelian hernia-cryptorchidism syndrome, autosomal recessive leukoencephalopathy-ischemic stroke-retinitis pigmentosa syndrome, severe neonatal hypotonia-seizures-encephalopathy syndrome due to 5q31.3 microdeletion, multiple sclerosis-ichthyosis-factor VIII deficiency syndrome, X-linked spasticity-intellectual disability-epilepsy syndrome, spina bifida-hypospadias syndrome, hantavirus pulmonary syndrome, white matter hypoplasia-corpus callosum agenesis-intellectual disability syndrome, deafness-genital anomalies-metacarpal and metatarsal synostosis syndrome, hearing loss-familial salivary gland insensitivity to aldosterone syndrome, multiple synostoses syndrome, central nervous system calcification-deafness-tubular acidosis-anemia syndrome, multiple paragangliomas associated with polycythemia, syngnathia multiple anomalies, Takayasu arteritis, severe early-onset obesity-insulin resistance syndrome due to SH2B1 deficiency, spondylocostal dysostosis-hypospadias-intellectual disability syndrome, hypotrichosis-deafness syndrome, thalidomide embryopathy, trisomy X, trisomy 13, trisomy 18, umbilical cord ulceration-intestinal atresia syndrome, microcephaly-brachydactyly-kyphoscoliosis syndrome, Waardenburg syndrome, Weill-Marchesani syndrome, infantile spasms, Wolfram syndrome, epidermal nevus syndrome, digital anomalies-intellectual disability-short stature syndrome, intellectual disability-obesity-brain malformations-facial dysmorphism syndrome, Erdheim-Chester disease, Stevens-Johnson syndrome, CADDS, finger hyperphalangy - toe anomalies - severe pectus excavatum syndrome, ataxia - telangiectasia variant, growth retardation-mild developmental delay-chronic hepatitis syndrome, primary microcephaly-mild intellectual disability-young-onset diabetes syndrome, ferro-cerebro-cutaneous syndrome, dystonia-aphonia syndrome, microcephaly-complex motor and sensory axonal neuropathy syndrome, X-linked microcephaly-growth retardation-prognathism-cryptorchidism syndrome, severe intellectual disability-hypotonia-strabismus-coarse face-planovalgus syndrome, intrauterine growth restriction-short stature-early adult-onset diabetes syndrome, pseudoxanthoma elasticum-like skin manifestations with retinitis pigmentosa, familial chylomicronemia syndrome, caudal regression-sirenomelia spectrum, visceral heterotaxy, Holmes-Adie syndrome, microcephalic primordial dwarfism due to RTTN deficiency, Joubert syndrome, congenital generalized hypercontractile muscle stiffness syndrome, Kallmann syndrome, Caroli syndrome, X-linked female restricted facial dysmorphism-short stature-choanal atresia-intellectual disability, microlissencephaly-micromelia syndrome, branchiootic syndrome, Plummer-Vinson syndrome, Cushing syndrome, McCune-Albright syndrome, Meckel syndrome, SUNCT syndrome, mucopolysaccharidosis type 3, mucopolysaccharidosis type 4, congenital myasthenic syndrome, Loeys-Dietz syndrome, Alport syndrome, schisis association, Tolosa-Hunt syndrome, iridocorneal endothelial syndrome, short fifth metacarpals-insulin resistance syndrome, progressive supranuclear palsy, benign exophthalmos syndrome, Sandifer syndrome, global developmental delay-osteopenia-ectodermal defect syndrome, tubular renal disease-cardiomyopathy syndrome, angioosteohypotrophic syndrome, 6q terminal deletion syndrome, Axenfeld-Rieger syndrome, peroxisome biogenesis disorder, ectodermal dysplasia syndrome, Seckel syndrome, Sotos syndrome, Stickler syndrome, pelvis syndrome, Susac syndrome, ischio-vertebral syndrome, BRESEK syndrome, Turner syndrome, Usher syndrome, obesity-colitis-hypothyroidism-cardiac hypertrophy-developmental delay syndrome, CREST syndrome, Sheehan syndrome, polymyalgia rheumatica, autoinflammatory syndrome, neuroleptic malignant syndrome, pituitary stalk interruption syndrome, monosomy 13q34, ring chromosome 13, 48,XXXY syndrome, 49,XXXXY syndrome, hereditary continuous muscle fiber activity, Eisenmenger syndrome, Robinow syndrome, Ehlers-Danlos syndrome, hypoplastic right heart syndrome, shone complex, 48,XYYY syndrome, subcortical band heterotopia, complex regional pain syndrome type 2, faciodigitogenital syndrome, neoplastic syndrome, paraneoplastic syndrome, post-infectious syndrome, Achard-Thiers syndrome, acral dysostosis dyserythropoiesis syndrome, agnathia-microstomia-synotia, Aksu von Stockhausen syndrome, Aloi Tomasini Isaia syndrome, temporomandibular joint dysfunction syndrome, Apert-like polydactyly syndrome, arakawa syndrome 2, arena syndrome, Arnold stickler bourne syndrome, baetz-greenwalt syndrome, bagatelle Cassidy syndrome, baker Vinters syndrome, bobble-head doll syndrome, Boerhaave syndrome, Cantu Sanchez-Corona Fragoso syndrome, Cantu Sanchez-Corona Hernandez syndrome, carbon baby syndrome, Carnevale hernandez castillo syndrome, Cartwright Nelson Fryns syndrome, Charles bonnet syndrome, Parinaud syndrome, corticobasal degeneration disorder, hair defect with photosensitivity and intellectual disability syndrome, AIDS dysmorphic syndrome, congenital acardia, acute lymphoblastic leukemia congenital sporadic aniridia, aglossia and situs inversus, agyria pachygyria polymicrogyria, agyria-pachygyria type 1, Ahumada Del Castillo syndrome, alopecia congenita keratosis palmoplantaris, alpha-mannosidosis type 1, aluminosis, Mauriac syndrome, ankle defects short stature, ankyloblepharon filiforme imperforate anus, annular constricting bands, anophthalmia cleft palate micrognathia, anophthalmia esophageal atresia cryptorchidism, anotia facial palsy cardiac defect, aortic dissection lentiginosis, childhood aortic valve stenosis, arthrogryposis IUGR thoracic dystrophy, arthrogryposis multiplex congenita CNS calcification, arthrogryposis spinal muscular atrophy, asternia, atlanto-axial fusion, atrophoderma of Pierini and Pasini, Barnicoat Baraitser syndrome, Basedow’s coma, BD syndrome, Beardwell syndrome, bhaskar jagannathan syndrome, bidirectional tachycardia, bilirubin induced brain injury in the newborn, blepharo naso facial syndrome van Maldergem type, bone dysplasia corpus callosum agenesis, brachydactyly absence of distal phalanges, brachydactyly anonychia, brachydactyly small stature face anomalies, brachydactyly tibial hypoplasia, brittle bone syndrome lethal type, bronchiectasis oligospermia, Brunsting-Perry syndrome, bruyn scheltens syndrome, burn goodship syndrome, camptodactyly joint contractures and facial skeletal dysplasia, camptodactyly vertebral fusion, Cantu Sanchez-Corona Garcia-Cruz syndrome, cardiac hydatid cysts with intracavitary expansion, cardioencephalomyopathy, cardiofacial syndrome short limbs, cardiomelic syndrome stratton Koehler type, cardiomyopathy and deafness due to tRNA lysine gene mutation, cardiomyopathy diabetes deafness, cardiomyopathy hypogonadism collagenoma syndrome, cardiomyopathy hypogonadism metabolic anomalies, cardiomyopathy spherocytosis, carpo tarsal osteolysis recessive, autosomal dominant cataract, cataract skeletal anomalies, cennamo gangemi syndrome, cerebellar agenesis, cerebello-olivary atrophy, cerebral calcification cerebellar hypoplasia, cerebral calcifications opalescent teeth phosphaturia, oculo digital syndrome, chondrodysplasia, choreoacanthocytosis amyotrophic, chorioretinopathy dominant form microcephaly, Christian Demyer Franken syndrome, Christian Johnson angenieta syndrome, chromosome 3 duplication syndrome, chronic demyelinizing neuropathy with IgM monoclonal, ciliary dyskinesia-bronchiectasis, circumscribed cutaneous aplasia of the vertex, circumscribed disseminated keratosis Jadassohn lew type, cleft lip and palate malrotation cardiopathy, cleft lip and/or palate with mucous cysts of lower, cleft lip palate dysmorphism kumar type, cleft lip palate intellectual disability corneal opacity, cleft lip palate oligodontia syndactyly pili torti, cleft lip palate pituitary deficiency, cleft lip palate-tetraphocomelia, cleft lower lip cleft lateral canthi chorioretinal, cleft palate cardiac defect ectrodactyly, cleft palate colobomata radial synostosis deafness, cleft palate heart disease polydactyly absent tibia, cleft tongue, coarse face hypotonia constipation, Cohen Lockood Wyborney syndrome, type 2 collagenopathy, Collins-Sakati syndrome, coloboma porencephaly hydronephrosis, colobomata unilobar lung heart defect, colonic malakoplakia, Colver Steer Godman syndrome, Combarros Calleja Leno syndrome, complement receptor deficiency, congenital absence of the sternocleidomastoid muscle, congenital amputation, congenital aneurysms of the great vessels, congenital articular rigidity, congenital benign spinal muscular atrophy dominant, congenital cardiovascular shunt, congenital contractures, congenital craniosynostosis maternal hyperthyroiditis, congenital cystic eye, congenital heart disease ptosis hypodontia craniostosis, congenital heart disease radio ulnar synostosis intellectual disability, congenital mumps, congenital stenosis of cervical medullary canal, Dennis-Fairhurst-Moore syndrome, congenital unilateral pulmonary hypoplasia, congenital vagal hyperreflexivity, Cormier Rustin Munnich syndrome, corneal crystals myopathy neuropathy, corneal dystrophy ichthyosis microcephaly intellectual disability, corneal dystrophy pigmentary anomaly malabsorption, corpus callosum agenesis of blepharophimosis robin type, corpus callosum dysgenesis X-linked recessive, corpus callosum dysgenesis cleft spasm, corpus callosum dysgenesis hypopituitarism, cortada Koussef Matsumoto syndrome, Cortes Lacassie syndrome, craniofacial and skeletal defects, craniofacial dysostosis arthrogryposis progeroid appearance, craniofrontonasal syndrome Teebi type, craniostenosis with congenital heart disease intellectual disability, crawfurd syndrome, cutis gyratum acanthosis nigricans craniosynostosis, cutis laxa osteoporosis, Davenport-Donlan syndrome, Davis Lafer syndrome, de Hauwere Leroy adriaenssens syndrome, deafness conductive stapedial ear malformation facial palsy, deafness goiter stippled epiphyses, deafness hypospadias metacarpal and metatarsal syndrome, deafness mesenteric diverticula of small bowel neuropathy, deafness peripheral neuropathy arterial disease, deafness progressive cataract autosomal dominant, dermatocardioskeletal syndrome boronne type, dextrocardia with situs inversus, diabetes persistent mullerian ducts, diaphragmatic agenesis radial aplasia omphalocele, diaphragmatic hernia exomphalos corpus callosum agenesis, diaphragmatic hernia upper limb defects, die Smulders droog van dijk syndrome, diomedi bernardi placidi syndrome, diphallus rachischisis imperforate anus, distichiasis heart congenital anomalies, double discordia, double uterus-hemivagina-renal agenesis, Drachtman Weinblatt Sitarz syndrome, Duker-Weiss-Siber syndrome, duodenal atresia tetralogy of fallot, duplication of leg mirror foot, duplication of the thumb unilateral biphalangeal, dupont sellier chochillon syndrome, dwarfism bluish sclerae, dwarfism deafness retinitis pigmentosa, dwarfism lethal type advanced bone age, dwarfism thin bones multiple fractures, dysmorphism cleft palate loose skin, Eagle syndrome, ectrodactyly cardiopathy dysmorphism, Elliott ludman Teebi syndrome, enamel hypoplasia cataract hydrocephaly, encephalocele anencephaly, enchondromatosis dwarfism deafness, Engelhard Yatziv syndrome, enlarged vestibular aqueduct syndrome, epidermal nevus vitamin D resistant rickets, epimetaphyseal dysplasia cataract, epiphyseal dysplasia dysmorphism camptodactyly, esophageal atresia coloboma talipes, extrasystoles short stature hyperpigmentation microcephaly, facial clefting corpus callosum agenesis, facio digito genital syndrome recessive form, facio skeletal genital syndrome rippberger type, familial capillaro-venous leptomeningeal angiomatosis, Dursun syndrome, Faye-Petersen-Ward-Carey syndrome, feigenbaum Bergeron syndrome, Feingold trainer syndrome, fetal brain disruption sequence, fetal enterovirus syndrome, fetal parainfluenza virus type 3 syndrome, fetal phenothiazine syndrome, fibromatosis multiple non ossifying, fibula aplasia complex brachydactyly, fibular hypoplasia scapulo pelvic dysplasia absent, Fitz-Hugh-Curtis syndrome, focal alopecia congenital megalencephaly, focal or multifocal malformations in neuronal migration, foix chavany Marie syndrome, Fontaine farriaux blanckaert syndrome, Fraser Jequier Chen syndrome, Freiberg disease, Friedman Goodman syndrome, frontonasal malformation cloacal exstrophy, frontonasal dysplasia Klippel feil syndrome, frontonasal dysplasia phocomelic upper limbs, Fryns Fabry Remans syndrome, Fryns Smeets Thiry syndrome, Fuchs atrophia gyrata chorioideae et retinae, Fukuda-Miyanomae-Nakata syndrome, Fuqua Berkovitz syndrome, Garret-Tripp syndrome, gas bloat syndrome, Gaucher ichthyosis restrictive dermopathy, gershinibaruch Leibo syndrome, Ghose-Sachdev-Kumar syndrome, gigantism advanced bone age hoarse cry, glossopalatine ankylosis micrognathia ear anomalies, goldstein hutt syndrome, goniodysgenesis intellectual disability short stature, green sandford davison syndrome, grix Blankenship Peterson syndrome, Ho-Kaufman-McAlister syndrome, Jaffer-Beighton syndrome, Judge Misch wright syndrome, Kashani-Strom-Utley syndrome, Kasznica-Carlson-Coppedge syndrome, Katsantoni-Papadakou-Lagoyanni syndrome, Kocher-debre-Semelaigne syndrome, Koone-Rizzo-Elias syndrome, Kozlowski Brown Hardwick syndrome, Kozlowski Ouvrier syndrome, Kozlowski Rafinski Klicharska syndrome, Kozlowski Warren Fisher syndrome, Krauss Herman Holmes syndrome, Krieble Bixler syndrome, Kuster Majewski Hammerstein syndrome, Kuster syndrome, Laugier-Hunziker syndrome, Laurence-Prosser-Rocker syndrome, le Marec-Bracq-Picaud syndrome, levator syndrome, Marinesco-Sjogren-like syndrome, Milner-Khallouf-Gibson syndrome, radio-digito-facial dysplasia, Seckel like syndrome majoor-krakauer type, neonatal aspiration syndrome, muscular fibrosis multifocal obstructed vessels, short stature contractures hypotonia, Alice in Wonderland syndrome, megacystis-microcolon-intestinal hypoperistalsis syndrome, Basilicata-Akhtar syndrome, Liberfarb syndrome, craniofacial dysmorphism, skeletal anomalies, and impaired intellectual development syndrome, cardiac, facial, and digital anomalies with developmental delay, fibrosis, neurodegeneration, and cerebral angiomatosis, Duane anomaly-myopathy-scoliosis syndrome, congenital cataract-severe neonatal hepatopathy-global developmental delay syndrome, infantile hypotonia-oculomotor anomalies-hyperkinetic movements-developmental delay syndrome, acute radiation syndrome, monoclonal mast cell activation syndrome, oculocerebrodental syndrome, syndromic congenital sodium diarrhea, congenital brachyesophagus-intrathoracic stomach-vertebral anomalies syndrome, intellectual disability-cardiac anomalies-short stature-joint laxity syndrome, intrauterine growth restriction-congenital multiple café-au-lait macules-increased sister chromatid exchange syndrome, frontonasal dysplasia-bifid nose-upper limb anomalies syndrome, microcephaly-facial dysmorphism-ocular anomalies-multiple congenital anomalies syndrome, diaphragmatic hernia-short bowel-asplenia syndrome, warts-immunodeficiency-lymphedema-anogenital dysplasia syndrome, Cramp-fasciculation syndrome, choanal atresia-athelia-hypothyroidism-delayed puberty-short stature syndrome, blepharophimosis-intellectual disability syndrome/genitopatellar overlap syndrome, CCNK-related neurodevelopmental disorder-severe intellectual disability-facial dysmorphism syndrome, cerebellar hypoplasia-intellectual disability-congenital microcephaly-dystonia-anemia-growth retardation syndrome, KLHL7-related Bohring-Opitz-like syndrome, KLHL7-related cold-induced sweating-like syndrome, KAT6B-related multiple congenital anomalies syndrome, oculogastrointestinal-neurodevelopmental syndrome, spastic paraparesis-cataracts-speech delay syndrome, Ruzicka-Goerz-Anton syndrome, Sammartino-Decreccio syndrome, Samson-Gardner syndrome, Samson-Viljoen syndrome, Sanderson-Fraser syndrome, Sandhaus-Ben-Ami syndrome, prostatic malacoplakia associated with prostatic abscess, Saul-Wilkes-Stevenson syndrome, macrogyria, pseudobulbar palsy and intellectual disability, Schwartz-Cohen-addad-Lambert syndrome, Schlegelberger-Grote syndrome, Schrander-stumpel-Theunissen-Hulsmans syndrome, Saal-Bulas syndrome, Sackey-Sakati-Aur syndrome, Slti-Salem syndrome, Zerres Rietschel Majewski syndrome, Zazam Sheriff Phillips syndrome, Zadik-Barak-Levin syndrome, weinstein kliman scully syndrome, thickened earlobes with conductive deafness from incus-stapes abnormalities, ichthyosis linearis circumflexa, infantile striato thalamic degeneration, Landy-Donnai syndrome, merlob grunebaum reisner syndrome, Pavone Fiumara Rizzo syndrome, pfeiffer rockelein syndrome, Pfeiffer Tietze Welte syndrome, phosphoribosylpyrophosphate synthetase deficiency, piepkorn karp hickok syndrome, podder-tolmie syndrome, pointer syndrome, richieri-costa guion-almeida cohen syndrome, Rubinstein Taybi like syndrome, ruvalcaba churesigaew myhre syndrome, short limb dwarf lethal colavita kozlowski type, Mallory-Weiss syndrome, superior vena cava syndrome, piriformis syndrome, engraftment syndrome, Adams-Stokes syndrome, Leriche syndrome, multiple organ dysfunction syndrome, posterior leukoencephalopathy syndrome, cardio-renal syndrome, Rahman syndrome, X-linked keloid scarring-reduced joint mobility-increased optic cup-to-disc ratio syndrome, retinitis pigmentosa-hearing loss-premature aging-short stature-facial dysmorphism syndrome, congenital labioscrotal agenesis-cerebellar malformation-corneal dystrophy-facial dysmorphism syndrome, Lopes-Maciel-Rodan syndrome, Stankiewicz-Isidor syndrome, Skraban-Deardorff syndrome, joint laxity, short stature, and myopia, Sweeney-Cox syndrome, Alkuraya-Kucinskas syndrome, Jaberi-Elahi syndrome, neurodevelopmental disorder with regression, abnormal movements, loss of speech, and seizures, hearing impairment and infertile male syndrome, cardiocutaneous syndrome, neonatal diabetes, congenital sensorineural hearing loss and congenital cataracts, cardioectodermal syndrome, cannabinoid hyperemesis syndrome, retrograde cricopharyngeus dysfunction, Zinner syndrome, retinal dystrophy-ataxia-pituitary hormone abnormality-hypogonadism syndrome, IFAP syndrome, DICER1-related tumor predisposition, Roberts-SC phocomelia syndrome, carcinoid syndrome, Bonnevie-Ullrich syndrome, NKX2-1 related choreoathetosis and congenital hypothyroidism with or without pulmonary dysfunction, RNU4ATAC spectrum disorder, syndromic congenital heart disease, hand-foot syndrome, central hypoventilation syndrome, congenital, 1, with or without Hirschsprung disease, gastrointestinal defects and immunodeficiency syndrome 1, achalasia-alacrima syndrome, black locks with albinism and deafness syndrome, Birt-Hogg-Dube syndrome, trigeminal trophic syndrome, developmental and/or epileptic encephalopathy with spike-wave activation in sleep, syndromic microspherophakia, painful legs and moving toes syndrome, congenital aphakia-iris hypoplasia-microphthalmia-microcornea syndrome, hereditary persistence of fetal hemoglobin-intellectual disability syndrome, developmental delay-immunodeficiency-leukoencephalopathy-hypohomocysteinemia syndrome, primary hypomagnesemia-generalized seizures-intellectual disability-obesity syndrome, post-cardiac arrest syndrome, early-onset obesity-hyperphagia-severe developmental delay syndrome, hereditary alpha tryptasemia syndrome, KINSSHIP syndrome, developmental delay, hypotrophy, and dysmorphic features without moebius syndrome, breast implant illness, cataracts, hearing impairment, nephrotic syndrome, and enterocolitis, craniosynostosis-facial dysmorphism-chiari-1 malformation-developmental and language delay syndrome, MYT1L-related developmental delay-intellectual disability-obesity syndrome, Houge-Janssens syndrome, xerosis and growth failure with immune and pulmonary dysfunction syndrome, Fliedner-Zweier syndrome, Lui-Jee-Baron syndrome, Long-Olsen-Distelmaier syndrome, Tan-Almurshedi syndrome, diabetes, deafness, developmental delay, and short stature syndrome, Alfadhel syndrome, Hoxha-Aliu syndrome, cleft palate-congenital heart defect-intellectual disability syndrome, congenital insensitivity to pain syndrome, Marsili type, Yuksel-Vogel-Bauer syndrome, polydactyly-macrocephaly syndrome, pyoderma gangrenosum-acne-hidradenitis suppurativa-ankylosing spondylitis syndrome, psoriatic arthritis-pyoderma gangrenosum-acne-hidradenitis suppurativa syndrome, megalencephaly-polydactyly syndrome, Leigh syndrome, mitochondrial, auroneurodental syndrome, orofacial clefting-cardiac anomalies-facial dysmorphism syndrome, Grisel syndrome, arterial tortuosity-bone fragility syndrome, dialysis disequilibrium syndrome, brain abnormalities-severe developmental delay-facial dysmorphism-intellectual disability syndrome due to MEF2C mutation, Kariminejad neurodevelopmental syndrome, myelofibrosis, congenital, with anemia, neutropenia, developmental delay, and ocular abnormalities, brain malformation renal syndrome, myopathy with myalgia, increased serum creatine kinase, and with or without episodic rhabdomyolysis 2, Karayol-Borroto-Haghshenas neurodevelopmental syndrome, neurodegeneration, infantile-onset, with optic atrophy and brain abnormalities, Morimoto-Ryu-Malicdan neuromuscular syndrome, neurodevelopmental disorder with dysmorphic facies, absent speech and ambulation, and brain abnormalities, neurodevelopmental disorder with variable familial hypercholanemia, Pan-Chung-Bellen syndrome, telangiectasia, impaired intellectual development, microcephaly, metaphyseal dysplasia, eye abnormalities, and short stature, Muggenthaler-Chowdhury-Chioza syndrome, Tayoun-Maawali syndrome, ragopathy, cardiovascular-kidney-metabolic syndrome, craniofaciocardiohepatic syndrome, FICUS syndrome, Li-Takada-Miyake syndrome, Guillouet-Gordon syndrome, ICHAD syndrome, cataract, alopecia, oral mucosal disorder, and psoriasis-like syndrome, RAC2-related combined immunodeficiency-bronchiectasis-cancer-predisposing syndrome, oculovertebral syndrome, Alsahan-Harris syndrome, Ververi-Brady syndrome, Dursun-Ozgul neurodevelopmental syndrome, immune dysregulation, neurodevelopmental defects, and colitis, Harel-Tora neurodevelopmental syndrome, Valence-Farazi cerebellar ataxia syndrome, dyschromatosis, ichthyosis, deafness, and atopic disease, Ramond-Elliott neurodevelopmental syndrome, STAD syndrome, craniosynostosis-scoliosis syndrome, loin pain hematuria syndrome, IRF6-related condition, linkeropathy, NDUFB11-related disorders, CRYAB-related myofibrillar myopathy-cataract-cardiomyopathy spectrum disorder, TSEN2-related neurodevelopmental disorder with or without thrombotic microangiopathy, antiphospholipid syndrome

Subtypes (14): Noonan syndrome 1, Noonan syndrome 2, Noonan syndrome 3, Noonan syndrome 4, Noonan syndrome 5, Noonan syndrome 6, Noonan syndrome 7, Noonan syndrome 8, Noonan syndrome 9, Noonan syndrome 10, Noonan syndrome 14, Noonan syndrome 11, noonan syndrome 12, Noonan syndrome 13

Genetics & variants

GWAS landscape

No GWAS associations recorded — common-variant (GWAS) studies don’t cover this disease (typical for Mendelian / rare diseases). See the curated gene cohort and Mendelian overlap below.

Variant details and genetic-evidence tiers

ClinVar germline variants

600 retrieved; paginated sample, class counts are floors:

176 uncertain significance, 118 pathogenic, 104 likely benign, 71 pathogenic/likely pathogenic, 50 conflicting classifications of pathogenicity, 37 benign, 22 benign/likely benign, 22 likely pathogenic

ClinVarVariant (HGVS)GeneClassificationReview
4075175NM_001374828.1(ARID1B):c.3506del (p.Lys1169fs)ARID1BPathogeniccriteria provided, single submitter
13964NM_004333.6(BRAF):c.1391G>A (p.Gly464Glu)BRAFPathogenicreviewed by expert panel
13965NM_004333.6(BRAF):c.736G>C (p.Ala246Pro)BRAFPathogenicreviewed by expert panel
13969NM_004333.6(BRAF):c.1789C>G (p.Leu597Val)BRAFPathogeniccriteria provided, multiple submitters, no conflicts
13975NM_004333.6(BRAF):c.1455G>C (p.Leu485Phe)BRAFPathogenicreviewed by expert panel
13977NM_004333.6(BRAF):c.1501G>A (p.Glu501Lys)BRAFPathogenic/Likely pathogeniccriteria provided, multiple submitters, no conflicts
162795NM_004333.6(BRAF):c.2135C>A (p.Ala712Asp)BRAFPathogenic/Likely pathogeniccriteria provided, multiple submitters, no conflicts
177844NM_004333.6(BRAF):c.1455G>T (p.Leu485Phe)BRAFPathogenicreviewed by expert panel
180784NM_004333.6(BRAF):c.739T>C (p.Phe247Leu)BRAFPathogenicreviewed by expert panel
29805NM_004333.6(BRAF):c.722C>T (p.Thr241Met)BRAFPathogenic/Likely pathogeniccriteria provided, multiple submitters, no conflicts
40351NM_004333.6(BRAF):c.769C>A (p.Gln257Lys)BRAFPathogenic/Likely pathogeniccriteria provided, multiple submitters, no conflicts
40373NM_004333.6(BRAF):c.1502A>C (p.Glu501Ala)BRAFPathogeniccriteria provided, multiple submitters, no conflicts
40375NM_004333.6(BRAF):c.1513C>T (p.Leu505Phe)BRAFPathogeniccriteria provided, multiple submitters, no conflicts
40387NM_004333.6(BRAF):c.1787G>T (p.Gly596Val)BRAFPathogenicreviewed by expert panel
40388NM_004333.6(BRAF):c.1796C>T (p.Thr599Ile)BRAFPathogenicreviewed by expert panel
41446NM_004333.6(BRAF):c.1801A>C (p.Lys601Gln)BRAFPathogeniccriteria provided, multiple submitters, no conflicts
44818NM_004333.6(BRAF):c.1802A>C (p.Lys601Thr)BRAFPathogeniccriteria provided, multiple submitters, no conflicts
44829NM_004333.6(BRAF):c.722C>A (p.Thr241Lys)BRAFPathogenicreviewed by expert panel
44831NM_004333.6(BRAF):c.785A>C (p.Gln262Pro)BRAFPathogenic/Likely pathogeniccriteria provided, multiple submitters, no conflicts
55793NM_004333.6(BRAF):c.741T>G (p.Phe247Leu)BRAFPathogenicreviewed by expert panel
13807NM_005188.4(CBL):c.1100A>C (p.Gln367Pro)CBLPathogenic/Likely pathogeniccriteria provided, multiple submitters, no conflicts
177959NM_005188.4(CBL):c.1228-2A>GCBLPathogenic/Likely pathogeniccriteria provided, multiple submitters, no conflicts
180815NM_005188.4(CBL):c.1096-1G>TCBLPathogeniccriteria provided, multiple submitters, no conflicts
45196NM_005188.4(CBL):c.1096-1G>CCBLPathogenic/Likely pathogeniccriteria provided, multiple submitters, no conflicts
45197NM_005188.4(CBL):c.1096-4_1096-1delCBLPathogenic/Likely pathogeniccriteria provided, multiple submitters, no conflicts
4072118NM_004380.3(CREBBP):c.5658del (p.Ser1887fs)CREBBPPathogeniccriteria provided, single submitter
420168NM_006494.4(ERF):c.1201_1202del (p.Lys401fs)ERFPathogenic/Likely pathogeniccriteria provided, multiple submitters, no conflicts
12606NM_005343.4(HRAS):c.37G>T (p.Gly13Cys)HRASPathogenicreviewed by expert panel
12586NM_004985.5(KRAS):c.178G>C (p.Gly60Arg)KRASPathogenicreviewed by expert panel
12587NM_004985.5(KRAS):c.458A>T (p.Asp153Val)KRASPathogenicreviewed by expert panel

Genes & proteins

Mendelian disease overlap and somatic drivers

GenCC: 217 · Orphanet: 85 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0

GenCC gene–disease validity (cohort genes)

the Disease column is the GenCC-asserted condition — a cohort gene’s strongest validity may be for a related predisposition syndrome.

GeneClassificationInheritanceDiseaseRecords
BRAFDefinitiveAutosomal dominantNoonan syndrome 723
KRASDefinitiveAutosomal dominantNoonan syndrome 317
LZTR1DefinitiveAutosomal dominantNoonan syndrome 1015
MRASDefinitiveAutosomal dominantNoonan syndrome 117
NRASDefinitiveAutosomal dominantNoonan syndrome10
PTPN11DefinitiveAutosomal dominantNoonan syndrome 119
RAF1DefinitiveAutosomal dominantNoonan syndrome18
RIT1DefinitiveAutosomal dominantNoonan syndrome6
RRAS2DefinitiveAutosomal dominantNoonan syndrome8
SHOC2DefinitiveAutosomal dominantNoonan syndrome-like disorder with loose anagen hair9
SOS1DefinitiveAutosomal dominantNoonan syndrome10
SOS2DefinitiveAutosomal dominantNoonan syndrome 97
ERFStrongAutosomal dominantNoonan syndrome10
ETF1StrongAutosomal dominantNoonan syndrome10
MAP2K1StrongAutosomal dominantNoonan syndrome with multiple lentigines11
RRASStrongAutosomal dominantNoonan syndrome and Noonan-related syndrome4
RASA2ModerateAutosomal dominantNoonan syndrome3
A2ML1SupportiveAutosomal dominantNoonan syndrome4
CBLSupportiveAutosomal dominantNoonan syndrome8
MAP2K2SupportiveAutosomal dominantneurofibromatosis-Noonan syndrome9
RASA1Disputed EvidenceAutosomal dominantNoonan syndrome9

Orphanet rare-disease linkage (cohort genes)

GeneOrphanet IDRare disease
RIT1Orphanet:648Noonan syndrome
RRASOrphanet:648Noonan syndrome
RRASOrphanet:86834Juvenile myelomonocytic leukemia
BRAFOrphanet:1340Cardiofaciocutaneous syndrome
BRAFOrphanet:146Differentiated thyroid carcinoma
BRAFOrphanet:251615Pilomyxoid astrocytoma
BRAFOrphanet:389Langerhans cell histiocytosis
BRAFOrphanet:500Noonan syndrome with multiple lentigines
BRAFOrphanet:54595Craniopharyngioma
BRAFOrphanet:58017Classic hairy cell leukemia
BRAFOrphanet:626Large/giant congenital melanocytic nevus
BRAFOrphanet:648Noonan syndrome
BRAFOrphanet:840Syringocystadenoma papilliferum
BRAFOrphanet:96253Cushing disease
SOS1Orphanet:2024Hereditary gingival fibromatosis
SOS1Orphanet:648Noonan syndrome
SOS2Orphanet:648Noonan syndrome
CBLOrphanet:363972Noonan syndrome-like disorder with juvenile myelomonocytic leukemia
CBLOrphanet:648Noonan syndrome
CBLOrphanet:86834Juvenile myelomonocytic leukemia
CBLOrphanet:98850Aggressive systemic mastocytosis
SHOC2Orphanet:2701Noonan syndrome-like disorder with loose anagen hair
RRAS2Orphanet:648Noonan syndrome
ERFOrphanet:207Crouzon syndrome
ERFOrphanet:647681Craniosynostosis-facial dysmorphism-Chiari-1 malformation-developmental and language delay syndrome
KRASOrphanet:1333Familial pancreatic carcinoma
KRASOrphanet:1340Cardiofaciocutaneous syndrome
KRASOrphanet:144Lynch syndrome
KRASOrphanet:146Differentiated thyroid carcinoma
KRASOrphanet:2396Encephalocraniocutaneous lipomatosis
KRASOrphanet:251615Pilomyxoid astrocytoma
KRASOrphanet:2612Linear nevus sebaceus syndrome
KRASOrphanet:268114RAS-associated autoimmune leukoproliferative disease
KRASOrphanet:3339Oculoectodermal syndrome
KRASOrphanet:648Noonan syndrome
KRASOrphanet:86834Juvenile myelomonocytic leukemia
LZTR1Orphanet:251576Gliosarcoma
LZTR1Orphanet:251579Giant cell glioblastoma
LZTR1Orphanet:2678Familial isolated café-au-lait macules
LZTR1Orphanet:648Noonan syndrome
LZTR1Orphanet:93921Full schwannomatosis
MAP2K1Orphanet:1340Cardiofaciocutaneous syndrome
MAP2K1Orphanet:389Langerhans cell histiocytosis
MAP2K2Orphanet:1340Cardiofaciocutaneous syndrome
MAP2K2Orphanet:638Neurofibromatosis-Noonan syndrome
NRASOrphanet:146Differentiated thyroid carcinoma
NRASOrphanet:2612Linear nevus sebaceus syndrome
NRASOrphanet:268114RAS-associated autoimmune leukoproliferative disease
NRASOrphanet:389Langerhans cell histiocytosis
NRASOrphanet:626Large/giant congenital melanocytic nevus

Cohort genes → proteins

29 cohort genes, 29 distinct canonical proteins.

Evidence partition

SubsetGenes
multi_evidence29

Cohort genes (full)

SymbolHGNCEnsemblUniProtNameEvidence
RIT1HGNC:10023ENSG00000143622Q92963GTP-binding protein Rit1gencc,clinvar
RRASHGNC:10447ENSG00000126458P10301Ras-related protein R-Rasgencc,clinvar
BRAFHGNC:1097ENSG00000157764P15056Serine/threonine-protein kinase B-rafgencc,clinvar
SOS1HGNC:11187ENSG00000115904Q07889Son of sevenless homolog 1gencc,clinvar
SOS2HGNC:11188ENSG00000100485Q07890Son of sevenless homolog 2gencc,clinvar
CBLHGNC:1541ENSG00000110395P22681E3 ubiquitin-protein ligase CBLgencc,clinvar
SHOC2HGNC:15454ENSG00000108061Q9UQ13Leucine-rich repeat protein SHOC-2gencc,clinvar
RRAS2HGNC:17271ENSG00000133818P62070Ras-related protein R-Ras2gencc,clinvar
A2ML1HGNC:23336ENSG00000166535A8K2U0Alpha-2-macroglobulin-like protein 1gencc,clinvar
ERFHGNC:3444ENSG00000105722P50548ETS domain-containing transcription factor ERFgencc,clinvar
ETF1HGNC:3477ENSG00000120705P62495Eukaryotic peptide chain release factor subunit 1gencc,clinvar
KRASHGNC:6407ENSG00000133703P01116GTPase KRasgencc,clinvar
LZTR1HGNC:6742ENSG00000099949Q8N653Leucine-zipper-like transcriptional regulator 1gencc,clinvar
MAP2K1HGNC:6840ENSG00000169032Q02750Dual specificity mitogen-activated protein kinase kinase 1gencc,clinvar
MAP2K2HGNC:6842ENSG00000126934P36507Dual specificity mitogen-activated protein kinase kinase 2gencc,clinvar
NRASHGNC:7989ENSG00000213281P01111GTPase NRasgencc,clinvar
PTPN11HGNC:9644ENSG00000179295Q06124Tyrosine-protein phosphatase non-receptor type 11gencc,clinvar
RAF1HGNC:9829ENSG00000132155P04049RAF proto-oncogene serine/threonine-protein kinasegencc,clinvar
RASA2HGNC:9872ENSG00000155903Q15283Ras GTPase-activating protein 2gencc,clinvar
MRASHGNC:7227ENSG00000158186O14807Ras-related protein M-Rasgencc
RASA1HGNC:9871ENSG00000145715P20936Ras GTPase-activating protein 1gencc
SPRED2HGNC:17722ENSG00000198369Q7Z698Sprouty-related, EVH1 domain-containing protein 2clinvar
ARID1BHGNC:18040ENSG00000049618Q8NFD5AT-rich interactive domain-containing protein 1Bclinvar
SPRED1HGNC:20249ENSG00000166068Q7Z699Sprouty-related, EVH1 domain-containing protein 1clinvar
CREBBPHGNC:2348ENSG00000005339Q92793CREB-binding proteinclinvar
LRRC56HGNC:25430ENSG00000161328Q8IYG6Leucine-rich repeat-containing protein 56clinvar
DMPKHGNC:2933ENSG00000104936Q09013Myotonin-protein kinaseclinvar
HRASHGNC:5173ENSG00000174775P01112GTPase HRasclinvar
PPP1CBHGNC:9282ENSG00000213639P62140Serine/threonine-protein phosphatase PP1-beta catalytic subunitclinvar

Cohort function summary

Lead sentence per gene, UniProt-curated.

SymbolProtein nameFunction (lead sentence)
RIT1GTP-binding protein Rit1Plays a crucial role in coupling NGF stimulation to the activation of both EPHB2 and MAPK14 signaling pathways and in NGF-dependent neuronal differentiation.
RRASRas-related protein R-RasGTP-binding protein with GTPase activity, likely involved in the regulation of MAPK signaling pathway and thereby controlling multiple cellular processes.
BRAFSerine/threonine-protein kinase B-rafProtein kinase involved in the transduction of mitogenic signals from the cell membrane to the nucleus.
SOS1Son of sevenless homolog 1Promotes the exchange of Ras-bound GDP by GTP.
SOS2Son of sevenless homolog 2Acts as guanine nucleotide exchange factor (GEF) for RAS proteins.
CBLE3 ubiquitin-protein ligase CBLE3 ubiquitin-protein ligase that acts as a negative regulator of many signaling pathways by mediating ubiquitination of cell surface receptors.
SHOC2Leucine-rich repeat protein SHOC-2Core component of the SHOC2-MRAS-PP1c (SMP) holophosphatase complex that regulates activation of the MAPK pathway.
RRAS2Ras-related protein R-Ras2GTP-binding protein with GTPase activity, involved in the regulation of MAPK signaling pathway and thereby controlling multiple cellular processes.
A2ML1Alpha-2-macroglobulin-like protein 1Is able to inhibit all four classes of proteinases by a unique ’trapping’ mechanism.
ERFETS domain-containing transcription factor ERFPotent transcriptional repressor that binds to the H1 element of the Ets2 promoter.
ETF1Eukaryotic peptide chain release factor subunit 1Component of the eRF1-eRF3-GTP ternary complex, a ternary complex that mediates translation termination in response to the termination codons.
KRASGTPase KRasRas proteins bind GDP/GTP and possess intrinsic GTPase activity.
LZTR1Leucine-zipper-like transcriptional regulator 1Substrate-specific adapter of a BCR (BTB-CUL3-RBX1) E3 ubiquitin-protein ligase complex that mediates ubiquitination of Ras (K-Ras/KRAS, N-Ras/NRAS and H-Ras/HRAS).
MAP2K1Dual specificity mitogen-activated protein kinase kinase 1Dual specificity protein kinase which acts as an essential component of the MAP kinase signal transduction pathway.
MAP2K2Dual specificity mitogen-activated protein kinase kinase 2Catalyzes the concomitant phosphorylation of a threonine and a tyrosine residue in a Thr-Glu-Tyr sequence located in MAP kinases.
NRASGTPase NRasRas proteins bind GDP/GTP and possess intrinsic GTPase activity.
PTPN11Tyrosine-protein phosphatase non-receptor type 11Acts downstream of various receptor and cytoplasmic protein tyrosine kinases to participate in the signal transduction from the cell surface to the nucleus.
RAF1RAF proto-oncogene serine/threonine-protein kinaseSerine/threonine-protein kinase that acts as a regulatory link between the membrane-associated Ras GTPases and the MAPK/ERK cascade, and this critical regulatory link functions as a switch determining cell fate decisions including prolifer…
RASA2Ras GTPase-activating protein 2Inhibitory regulator of the Ras-cyclic AMP pathway.
MRASRas-related protein M-RasSignal transducer in the Ras-MAPK signaling pathway that regulates cell proliferation and survival.
RASA1Ras GTPase-activating protein 1GTPase-activating protein (GAP) that stimulates the intrinsic GTPase activity of Ras proteins, such as NRAS, facilitating their transition from the active GTP-bound state to the inactive GDP-bound state, thereby terminating Ras signaling.
SPRED2Sprouty-related, EVH1 domain-containing protein 2Negatively regulates Ras signaling pathways and downstream activation of MAP kinases.
ARID1BAT-rich interactive domain-containing protein 1BInvolved in transcriptional activation and repression of select genes by chromatin remodeling (alteration of DNA-nucleosome topology).
SPRED1Sprouty-related, EVH1 domain-containing protein 1Tyrosine kinase substrate that inhibits growth-factor-mediated activation of MAP kinase.
CREBBPCREB-binding proteinAcetylates histones, giving a specific tag for transcriptional activation.
LRRC56Leucine-rich repeat-containing protein 56Required for the assembly of dynein arms.
DMPKMyotonin-protein kinaseNon-receptor serine/threonine protein kinase which is necessary for the maintenance of skeletal muscle structure and function.
HRASGTPase HRasInvolved in the activation of Ras protein signal transduction.
PPP1CBSerine/threonine-protein phosphatase PP1-beta catalytic subunitProtein phosphatase that associates with over 200 regulatory proteins to form highly specific holoenzymes which dephosphorylate hundreds of biological targets.

Protein-family classification

Druggable: 10 · Difficult: 6 · Unknown: 13 · Druggable fraction: 0.34

Family distribution

Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.

FamilyGenesFoldFDR
Kinase54.8×0.024
Phosphatase25.8×0.163
Complement19.2×0.240
Scaffold/PPI31.8×0.410
Transcription factor30.8×0.827
Enzyme (other)20.8×0.827
Other/Unknown130.8×0.916

Per-gene assignment

SymbolFamilyDruggable?ECInterPro (top 3)
RIT1Other/UnknownnoSmall_GTPase, Small_GTP-bd, Small_GTPase_Ras-type
RRASOther/UnknownnoSmall_GTPase, Small_GTP-bd, Small_GTPase_Ras-type
BRAFKinaseyes2.7.10.2Prot_kinase_dom, Ser-Thr/Tyr_kinase_cat_dom, PKC_DAG/PE
SOS1Scaffold/PPInoDH_dom, Ras-like_Gua-exchang_fac_N, PH_domain
SOS2Scaffold/PPInoDH_dom, Ras-like_Gua-exchang_fac_N, PH_domain
CBLTranscription factorno2.3.2.27Znf_RING, Adaptor_Cbl_N_hlx, UBA-like_sf
SHOC2Other/UnknownnoLeu-rich_rpt, Leu-rich_rpt_typical-subtyp, LRR_dom_sf
RRAS2Other/UnknownnoSmall_GTPase, Small_GTP-bd, Small_GTPase_Ras-type
A2ML1ComplementyesMacroglobln_a2, MG2, Terpenoid_cyclase/PrenylTrfase
ERFOther/UnknownnoEts_dom, WH-like_DNA-bd_sf, WH_DNA-bd_sf
ETF1Other/UnknownnoPeptide_chain-rel_eRF1/aRF1, eRF1_Pelota-like_N, eRF1_2
KRASEnzyme (other)yes3.6.5.2Small_GTPase, Small_GTP-bd, Small_GTPase_Ras-type
LZTR1Other/UnknownnoBTB/POZ_dom, Kelch_1, SKP1/BTB/POZ_sf
MAP2K1Kinaseyes2.7.12.2Prot_kinase_dom, Ser/Thr_kinase_AS, Kinase-like_dom_sf
MAP2K2Kinaseyes2.7.12.2Prot_kinase_dom, Ser/Thr_kinase_AS, Kinase-like_dom_sf
NRASOther/UnknownnoSmall_GTPase, Small_GTP-bd, Small_GTPase_Ras-type
PTPN11Phosphataseyes3.1.3.48PTP_cat, Tyr_Pase_dom, SH2
RAF1Kinaseyes2.7.10.2Prot_kinase_dom, Ser-Thr/Tyr_kinase_cat_dom, PKC_DAG/PE
RASA2Transcription factornoC2_dom, Znf_Btk_motif, PH_domain
MRASOther/UnknownnoSmall_GTPase, Small_GTP-bd, Small_GTPase_Ras-type
RASA1Scaffold/PPInoC2_dom, SH2, SH3_domain
SPRED2Other/UnknownnoWH1/EVH1_dom, Sprouty, PH-like_dom_sf
ARID1BOther/UnknownnoARID_dom, BAF250/Osa, BAF250_C
SPRED1Other/UnknownnoWH1/EVH1_dom, Sprouty, PH-like_dom_sf
CREBBPTranscription factorno2.3.1.48Znf_TAZ, Znf_ZZ, Bromodomain
LRRC56Other/UnknownnoLeu-rich_rpt, Leu-rich_rpt_4, LRR_dom_sf
DMPKKinaseyes2.7.11.1Prot_kinase_dom, AGC-kinase_C, Ser/Thr_kinase_AS
HRASEnzyme (other)yes3.6.5.2Small_GTPase, Small_GTP-bd, Small_GTPase_Ras-type
PPP1CBPhosphataseyes3.1.3.16Calcineurin-like_PHP, Ser/Thr-sp_prot-phosphatase, Metallo-depent_PP-like

Expression context

Cohort genes with no expression data: 0.

29 cohort genes are a single-cell marker in ≥1 SCXA experiment.

Breadth distribution (Bgee present_calls)

BucketGenes
narrow (1-5 tissues)0
moderate (6-20)0
broad (>20)29
unknown0

Top tissues across cohort

TissueCohort genes
sural nerve5
calcaneal tendon4
buccal mucosa cell3
colonic epithelium3
secondary oocyte3
mucosa of sigmoid colon3
ventricular zone3
right coronary artery2
trigeminal ganglion2
oocyte2
gingival epithelium2
mucosa of stomach2
right uterine tube2
left testis2
right testis2
epithelium of nasopharynx2
medial globus pallidus2
amniotic fluid2
leukocyte1
monocyte1

Per-gene tissue summary (top 30)

SymbolBgee breadthFANTOM5 breadthSCXATop tissues
RIT1268ubiquitousmarkermonocyte, mononuclear cell, leukocyte
RRAS242ubiquitousmarkerright coronary artery, popliteal artery, tibial artery
BRAF265ubiquitousmarkerbuccal mucosa cell, colonic epithelium, calcaneal tendon
SOS1289ubiquitousmarkercolonic epithelium, jejunal mucosa, tendon of biceps brachii
SOS2298ubiquitousmarkervastus lateralis, biceps brachii, buccal mucosa cell
CBL271ubiquitousmarkerprimordial germ cell in gonad, trigeminal ganglion, male germ line stem cell (sensu Vertebrata) in testis
SHOC2299ubiquitousmarkercalcaneal tendon, sural nerve, bone marrow
RRAS2287ubiquitousmarkersecondary oocyte, oocyte, skeletal muscle tissue of rectus abdominis
A2ML1176tissue_specificmarkerlower esophagus mucosa, gingiva, gingival epithelium
ERF242ubiquitousmarkerright uterine tube, mucosa of stomach, gall bladder
ETF1293ubiquitousmarkerislet of Langerhans, upper leg skin, mucosa of sigmoid colon
KRAS298ubiquitousmarkertrigeminal ganglion, pylorus, nipple
LZTR1134ubiquitousmarkersural nerve, pituitary gland, adenohypophysis
MAP2K1298ubiquitousmarkersecondary oocyte, oocyte, orbitofrontal cortex
MAP2K2291ubiquitousmarkermucosa of transverse colon, right testis, left testis
NRAS278ubiquitousmarkergingival epithelium, epithelium of nasopharynx, secondary oocyte
PTPN11295ubiquitousmarkermedial globus pallidus, dorsal motor nucleus of vagus nerve, globus pallidus
RAF1299ubiquitousmarkergastrocnemius, muscle of leg, ventricular zone
RASA2269ubiquitousmarkerepithelium of nasopharynx, superficial temporal artery, trabecular bone tissue
MRAS263ubiquitousmarkerlateral globus pallidus, medial globus pallidus, nucleus accumbens
RASA1298ubiquitousmarkerendothelial cell, placenta, choroid plexus epithelium
SPRED2270ubiquitousmarkersural nerve, mucosa of sigmoid colon, ventricular zone
ARID1B256ubiquitousmarkerbone marrow cell, colonic epithelium, sural nerve
SPRED1248ubiquitousmarkerventricular zone, mucosa of sigmoid colon, calcaneal tendon
CREBBP297ubiquitousmarkersural nerve, tibia, amniotic fluid
LRRC56129broadmarkerright uterine tube, right testis, left testis
DMPK246broadmarkerapex of heart, right coronary artery, mucosa of stomach
HRAS139ubiquitousmarkerskin of abdomen, skin of leg, zone of skin
PPP1CB295ubiquitousmarkercalcaneal tendon, amniotic fluid, buccal mucosa cell

Protein interactions among cohort

Intra-cohort edges: 87.

Hub genes (top 10 by interactor count)

SymbolInteractor count
KRAS14,509
HRAS8,064
NRAS7,598
BRAF7,394
CREBBP6,959
RAF16,574
PTPN116,009
MAP2K15,944
CBL4,575
RASA14,407

Intra-cohort edges

ABSources
A2ML1LZTR1string_interaction
A2ML1RASA2string_interaction
A2ML1RIT1string_interaction
A2ML1SHOC2string_interaction
BRAFHRASintact, string_interaction
BRAFKRASbiogrid_interaction, intact, string_interaction
BRAFMAP2K1biogrid_interaction, intact, string_interaction
BRAFMAP2K2biogrid_interaction, intact, string_interaction
BRAFMRASbiogrid_interaction
BRAFNRASbiogrid_interaction, intact, string_interaction
BRAFRAF1biogrid_interaction, intact, string_interaction
BRAFSHOC2string_interaction
BRAFSOS1string_interaction
BRAFSPRED1string_interaction
BRAFSPRED2string_interaction
HRASLZTR1biogrid_interaction
HRASMAP2K1string_interaction
HRASMAP2K2string_interaction
HRASMRASintact
HRASRAF1intact, string_interaction
HRASRASA1biogrid_interaction, string_interaction
HRASSHOC2intact, string_interaction
HRASSOS1intact, string_interaction
HRASSOS2string_interaction
KRASLZTR1string_interaction
KRASMAP2K1biogrid_interaction, string_interaction
KRASMAP2K2string_interaction
KRASNRASintact
KRASRAF1intact, string_interaction
KRASSHOC2intact, string_interaction
KRASSOS1string_interaction
KRASSOS2string_interaction
KRASSPRED1string_interaction
LZTR1MRASbiogrid_interaction
LZTR1NRASbiogrid_interaction, intact, string_interaction
LZTR1RASA2string_interaction
LZTR1RIT1biogrid_interaction, intact, string_interaction
LZTR1SHOC2string_interaction
LZTR1SOS1string_interaction
LZTR1SOS2string_interaction
MAP2K1MAP2K2biogrid_interaction, intact, string_interaction
MAP2K1NRASstring_interaction
MAP2K1PTPN11biogrid_interaction, string_interaction
MAP2K1RAF1biogrid_interaction, intact, string_interaction
MAP2K1SHOC2string_interaction
MAP2K2NRASintact, string_interaction
MAP2K2PTPN11string_interaction
MAP2K2RAF1biogrid_interaction, intact
MAP2K2RASA2string_interaction
MAP2K2SHOC2string_interaction

Structural data

PDB: 26 · AlphaFold-only: 3 · No structure: 0

Cohort genes with PDB structures (top 30)

SymbolUniProtPDB entries
KRASP01116511
HRASP01112246
CREBBPQ92793144
BRAFP15056131
PTPN11Q06124115
MAP2K1Q0275094
SOS1Q0788991
RAF1P0404976
NRASP0111135
CBLP2268133
ETF1P6249533
RASA1P2093615
SHOC2Q9UQ1313
SOS2Q0789011
MRASO1480711
A2ML1A8K2U05
RIT1Q929633
RRAS2P620703
LZTR1Q8N6533
MAP2K2P365073
SPRED1Q7Z6993
RRASP103012
ERFP505482
SPRED2Q7Z6982
ARID1BQ8NFD52
DMPKQ090132

AlphaFold-only cohort genes (top 30 by pLDDT)

SymbolUniProtpLDDT
PPP1CBP6214091.91
RASA2Q1528383.63
LRRC56Q8IYG656.07

Function

Pathway analysis

Distinct Reactome pathways touched by cohort: 402. Enrichment computed across 29 evidence-associated genes (26 with Reactome annotation).

Pathways by enrichment

Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 26 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.

PathwayCohort genesFoldFDRSample cohort genes
RAF activation10129.2×3e-17BRAF, SHOC2, KRAS, MAP2K1, MAP2K2, NRAS, RAF1, HRAS (+2 more)
RAS signaling downstream of NF1 loss-of-function variants5313.7×1e-10KRAS, NRAS, SPRED2, SPRED1, HRAS
Signaling by high-kinase activity BRAF mutants785.4×1e-10BRAF, KRAS, MAP2K1, MAP2K2, NRAS, RAF1, HRAS
SHOC2 M1731 mutant abolishes MRAS complex function5274.5×2e-10BRAF, SHOC2, RAF1, MRAS, PPP1CB
Gain-of-function MRAS complexes activate RAF signaling5274.5×2e-10BRAF, SHOC2, RAF1, MRAS, PPP1CB
MAP2K and MAPK activation776.9×2e-10BRAF, KRAS, MAP2K1, MAP2K2, NRAS, RAF1, HRAS
Signaling by RAF1 mutants775.0×2e-10BRAF, KRAS, MAP2K1, MAP2K2, NRAS, RAF1, HRAS
Negative regulation of MAPK pathway771.5×2e-10BRAF, KRAS, MAP2K1, MAP2K2, NRAS, RAF1, HRAS
Signaling by moderate kinase activity BRAF mutants768.3×2e-10BRAF, KRAS, MAP2K1, MAP2K2, NRAS, RAF1, HRAS
Paradoxical activation of RAF signaling by kinase inactive BRAF768.3×2e-10BRAF, KRAS, MAP2K1, MAP2K2, NRAS, RAF1, HRAS
Signaling downstream of RAS mutants768.3×2e-10BRAF, KRAS, MAP2K1, MAP2K2, NRAS, RAF1, HRAS
RAF/MAP kinase cascade1023.5×2e-10BRAF, SOS1, SHOC2, KRAS, MAP2K1, MAP2K2, NRAS, SPRED2 (+2 more)
Activated NTRK2 signals through FRS2 and FRS35183.0×1e-09SOS1, KRAS, NRAS, PTPN11, HRAS
Downstream signal transduction687.8×1e-09SOS1, KRAS, NRAS, PTPN11, HRAS, RASA1
Regulation of RAS by GAPs752.1×1e-09KRAS, NRAS, RASA2, SPRED2, SPRED1, HRAS, RASA1
Signaling by FGFR15156.9×2e-09BRAF, SOS1, CBL, SPRED2, SPRED1
FLT3 Signaling679.9×2e-09SOS1, CBL, KRAS, NRAS, PTPN11, HRAS
Signaling by BRAF and RAF1 fusions745.9×2e-09BRAF, KRAS, MAP2K1, MAP2K2, NRAS, RAF1, HRAS
Signaling by FLT3 ITD and TKD mutants5146.4×3e-09SOS1, KRAS, NRAS, PTPN11, HRAS
Constitutive Signaling by EGFRvIII5137.3×4e-09SOS1, CBL, KRAS, NRAS, HRAS
Negative feedback regulation of MAPK pathway4292.8×6e-09BRAF, MAP2K1, MAP2K2, RAF1
Diseases of signal transduction by growth factor receptors and second messengers919.7×6e-09BRAF, SOS1, CBL, SHOC2, MAP2K1, MAP2K2, SPRED2, SPRED1 (+1 more)
Tie2 Signaling5115.6×8e-09SOS1, KRAS, NRAS, PTPN11, HRAS
Constitutive Signaling by Ligand-Responsive EGFR Cancer Variants5109.8×1e-08SOS1, CBL, KRAS, NRAS, HRAS
Signaling by SCF-KIT657.3×1e-08SOS1, CBL, KRAS, NRAS, PTPN11, HRAS
Oncogenic MAPK signaling657.3×1e-08BRAF, SHOC2, MAP2K1, MAP2K2, SPRED2, SPRED1
MAPK1/MAPK3 signaling735.3×1e-08BRAF, SOS1, SHOC2, MAP2K1, MAP2K2, SPRED2, SPRED1
FRS-mediated FGFR3 signaling5104.6×1e-08SOS1, KRAS, NRAS, PTPN11, HRAS
CD209 (DC-SIGN) signaling599.8×1e-08KRAS, NRAS, RAF1, CREBBP, HRAS
FRS-mediated FGFR4 signaling595.5×2e-08SOS1, KRAS, NRAS, PTPN11, HRAS

GO biological processes by enrichment

Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 29 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.

GO termCohort genesFoldFDRSample cohort genes
Ras protein signal transduction963.8×3e-12RIT1, RRAS, SOS1, SOS2, RRAS2, KRAS, NRAS, HRAS (+1 more)
MAPK cascade842.3×2e-09BRAF, KRAS, MAP2K1, MAP2K2, NRAS, RAF1, HRAS, PPP1CB
Schwann cell development5181.6×5e-09SOS1, MAP2K1, MAP2K2, RAF1, HRAS
face development4110.7×4e-06BRAF, MAP2K1, MAP2K2, RAF1
myelination543.4×6e-06SOS1, MAP2K1, MAP2K2, RAF1, HRAS
thyroid gland development475.0×1e-05BRAF, MAP2K1, MAP2K2, RAF1
insulin-like growth factor receptor signaling pathway468.4×2e-05SOS1, MAP2K1, MAP2K2, RAF1
ERBB2-ERBB3 signaling pathway3174.3×2e-05MAP2K1, MAP2K2, RAF1
thymus development446.5×6e-05BRAF, MAP2K1, MAP2K2, RAF1
neurotrophin TRK receptor signaling pathway3109.0×9e-05SOS1, PTPN11, RAF1
cerebellar cortex formation2387.4×2e-04MAP2K1, PTPN11
Schwann cell migration2387.4×2e-04RRAS, RRAS2
insulin receptor signaling pathway430.6×2e-04SOS1, SOS2, RAF1, HRAS
regulation of Golgi inheritance2290.6×4e-04MAP2K1, MAP2K2
positive regulation of axonogenesis360.1×4e-04BRAF, MAP2K1, MAP2K2
epithelial cell proliferation involved in lung morphogenesis2232.4×6e-04MAP2K1, MAP2K2
regulation of pro-B cell differentiation2232.4×6e-04SOS1, SOS2
negative regulation of lens fiber cell differentiation2193.7×8e-04SPRED2, SPRED1
signal transduction95.0×8e-04RIT1, SOS1, CBL, MAP2K1, RAF1, RASA2, CREBBP, HRAS (+1 more)
regulation of T cell differentiation in thymus2166.0×9e-04SOS1, SOS2
regulation of axon regeneration2166.0×9e-04MAP2K1, MAP2K2
trachea formation2166.0×9e-04MAP2K1, MAP2K2
cytokine-mediated signaling pathway418.0×0.001SOS1, CBL, KRAS, PTPN11
negative regulation of intracellular signal transduction2145.3×0.001SPRED2, SPRED1
regulation of early endosome to late endosome transport2145.3×0.001MAP2K1, MAP2K2
regulation of stress-activated MAPK cascade2129.1×0.001MAP2K1, MAP2K2
ERK1 and ERK2 cascade332.9×0.001BRAF, MAP2K1, MAP2K2
negative regulation of neuron apoptotic process415.3×0.002BRAF, KRAS, HRAS, RASA1
fibroblast growth factor receptor signaling pathway329.6×0.002SOS1, SHOC2, PTPN11
Bergmann glial cell differentiation2105.7×0.002MAP2K1, PTPN11

Therapeutics

Drugs indicated for this disease

0 approved, 2 in late-stage (phase 3) trials. Disease-direct ChEMBL indications, not inferred from the associated-gene cohort below.

DrugDevelopment status
SimvastatinPhase 3 (in late-stage trials)
SomatropinPhase 3 (in late-stage trials)

Earlier-phase candidates (phase 2, investigational — efficacy not yet established): Mecasermin.

Drug target analysis

Approved (phase 4): 11 · Phase ≥3: 11 · Phased (≥1): 12 · Undrugged: 17

Druggability breadth: 16 of 29 evidence-associated genes (55%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).

Genes with an approved drug

The molecule shown is one approved compound that hits the gene — not necessarily a drug of choice or one indicated for this disease.

SymbolExample approved molecule
BRAFVEMURAFENIB
SOS1IDARUBICIN
SOS2TACRINE
KRASVEMURAFENIB
MAP2K1VEMURAFENIB
MAP2K2VEMURAFENIB
PTPN11ESTRAMUSTINE PHOSPHATE
RAF1VEMURAFENIB
CREBBPCOLCHICINE
DMPKFEDRATINIB
HRASLONAFARNIB

Top cohort targets by molecule count

SymbolMoleculesMax phase
MAP2K1544
MAP2K2524
BRAF484
RAF1314
DMPK204
CREBBP134
KRAS114
PTPN1184
SOS154
HRAS44

Drugs targeting cohort genes (top 30)

MoleculeMax phaseTargets in cohort
VEMURAFENIB4BRAF, KRAS, MAP2K1, MAP2K2, RAF1
PONATINIB4BRAF
FEDRATINIB4BRAF, DMPK, MAP2K1, MAP2K2
SORAFENIB4BRAF, MAP2K1, RAF1
DASATINIB ANHYDROUS4BRAF
RUXOLITINIB4BRAF, DMPK, MAP2K1, MAP2K2
INFIGRATINIB PHOSPHATE4BRAF
INFIGRATINIB4BRAF
REGORAFENIB4BRAF, RAF1
DABRAFENIB4BRAF, KRAS, RAF1
COBIMETINIB4BRAF, MAP2K1, MAP2K2
NILOTINIB4BRAF, RAF1
ABEMACICLIB4BRAF
ENCORAFENIB4BRAF
TOVORAFENIB4BRAF, RAF1
PAZOPANIB4BRAF, RAF1
DASATINIB4BRAF, DMPK, MAP2K1, MAP2K2, RAF1
ERLOTINIB4BRAF, DMPK, RAF1
GEFITINIB4BRAF, DMPK
IMATINIB4BRAF, RAF1
IDARUBICIN4SOS1
DOXORUBICIN4SOS1
SOTORASIB4KRAS, SOS1
ADAGRASIB4KRAS, SOS1
TACRINE4SOS2
LONAFARNIB4HRAS, KRAS
SELUMETINIB4MAP2K1, MAP2K2
TRAMETINIB4MAP2K1, MAP2K2
BINIMETINIB4MAP2K1, MAP2K2
AXITINIB4MAP2K1, MAP2K2

Bioactivity and enzyme data

Enzyme cohort genes (≥1 EC): 11.

Cohort genes with ChEMBL bioactivity (full, sorted by assay count)

SymbolAssaysType breakdown
BRAF1,442Binding:1400, Functional:37, ADMET:5
MAP2K11,200Binding:1150, Functional:47, ADMET:3
KRAS861Binding:829, Functional:32
RAF1839Binding:803, Functional:31, ADMET:5
CREBBP687Binding:644, Functional:43
MAP2K2615Binding:581, Functional:33, ADMET:1
PTPN11588Binding:585, Functional:2, ADMET:1
SOS1421Binding:409, Functional:12
DMPK210Binding:210
HRAS48Binding:45, Functional:3
NRAS18Binding:18
SOS210Binding:10
PPP1CB9Binding:9
CBL4Binding:2, Toxicity:2
RRAS23Binding:3
ETF11Binding:1

Cohort enzymes (BRENDA EC)

SymbolEC numbersNames
BRAF2.7.10.2, 2.7.11.1non-specific protein-tyrosine kinase, non-specific serine/threonine protein kinase
CBL2.3.2.27RING-type E3 ubiquitin transferase
KRAS3.6.5.2small monomeric GTPase
MAP2K12.7.12.2mitogen-activated protein kinase kinase
MAP2K22.7.12.2mitogen-activated protein kinase kinase
PTPN113.1.3.48protein-tyrosine-phosphatase
RAF12.7.10.2non-specific protein-tyrosine kinase
CREBBP2.3.1.48histone acetyltransferase
DMPK2.7.11.1non-specific serine/threonine protein kinase
HRAS3.6.5.2small monomeric GTPase
PPP1CB3.1.3.16protein-serine/threonine phosphatase

Cohort genes with high screening signal

≥100 ChEMBL assays — a studied-ness signal; see Therapeutics for approved-drug status.

SymbolChEMBL assays
BRAF1,442
SOS1421
KRAS861
MAP2K11,200
MAP2K2615
PTPN11588
RAF1839
CREBBP687
DMPK210

Pharmacogenomics

Cohort genes with a PharmGKB record: 29; with CPIC/DPWG dosing guidelines: 0.

No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).

Chemical tractability of cohort targets

30 approved/phased compounds have measured bioactivity against a cohort gene (and aren’t yet in disease-level trials). This is a research / tractability signal, NOT a therapeutic recommendation — a bioactivity row often reflects off-target or screening binding (e.g. promiscuous kinase inhibitors against a cohort kinase), implying no disease mechanism.

CompoundMax phaseCohort target (bioactivity)
VEMURAFENIB4BRAF, KRAS, MAP2K1, MAP2K2, RAF1
PONATINIB4BRAF
FEDRATINIB4BRAF, DMPK, MAP2K1, MAP2K2
SORAFENIB4BRAF, MAP2K1, RAF1
DASATINIB ANHYDROUS4BRAF
RUXOLITINIB4BRAF, DMPK, MAP2K1, MAP2K2
INFIGRATINIB PHOSPHATE4BRAF
INFIGRATINIB4BRAF
REGORAFENIB4BRAF, RAF1
DABRAFENIB4BRAF, KRAS, RAF1
COBIMETINIB4BRAF, MAP2K1, MAP2K2
NILOTINIB4BRAF, RAF1
ABEMACICLIB4BRAF
ENCORAFENIB4BRAF
TOVORAFENIB4BRAF, RAF1
PAZOPANIB4BRAF, RAF1
DASATINIB4BRAF, DMPK, MAP2K1, MAP2K2, RAF1
ERLOTINIB4BRAF, DMPK, RAF1
GEFITINIB4BRAF, DMPK
IMATINIB4BRAF, RAF1
IDARUBICIN4SOS1
DOXORUBICIN4SOS1
SOTORASIB4KRAS, SOS1
ADAGRASIB4KRAS, SOS1
TACRINE4SOS2
LONAFARNIB4HRAS, KRAS
SELUMETINIB4MAP2K1, MAP2K2
TRAMETINIB4MAP2K1, MAP2K2
BINIMETINIB4MAP2K1, MAP2K2
AXITINIB4MAP2K1, MAP2K2

Druggability pyramid

Cohort genes binned by druggability tier (high → low):

TierDefinitionGenesSymbols
AApproved (phase 4 drug)11BRAF, SOS1, SOS2, KRAS, MAP2K1, MAP2K2, PTPN11, RAF1, CREBBP, DMPK (+1 more)
BPhased (≥1) drug, not yet approved1NRAS
CDruggable family + PDB, no drug1A2ML1
DDruggable family + AlphaFold only, no drug1PPP1CB
EDifficult family or no structure, no drug15RIT1, RRAS, CBL, SHOC2, RRAS2, ERF, ETF1, LZTR1, RASA2, MRAS (+5 more)

Undrugged target profiles

17 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).

SymbolChEMBL assaysDrugged partners (top 3)
SHOC20SOS1, NRAS
RASA20SOS1, SOS2
MRAS0RAF1
RASA10HRAS
SPRED10RAF1
RIT10
RRAS0
CBL4
RRAS23
A2ML10
ERF0
ETF11
LZTR10
SPRED20
ARID1B0
LRRC560
PPP1CB9

Clinical trials & evidence

Clinical trials

Clinical trials: 27.

Phase distribution (across all retrieved trials)

PhaseTrials
Not specified18
PHASE36
PHASE23

Top trials by phase / activity

NCTPhaseStatusTitle
NCT05723835PHASE3ACTIVE_NOT_RECRUITINGA Research Study Looking at How Safe Somapacitan is and How Well it Works in Children Who Need Help to Grow - REAL 9
NCT00452725PHASE3COMPLETEDEffect of MAXOMAT ® on the Growth of Small Children to NOONAN’s Syndrome
NCT01529840PHASE3COMPLETEDSomatropin Effect on Linear Growth and Final Height in Subjects With Noonan Syndrome
NCT01529944PHASE3COMPLETEDGenetic Testing of Noonan Subjects Previously Treated With Norditropin®. An Extension to Trial GHNOO-1658
NCT01927861PHASE3COMPLETEDInvestigating the Long-term Efficacy and Safety of Two Doses of NN-220 (Somatropin) in Short Stature Due to Noonan Syndrome
NCT02713945PHASE3COMPLETEDTreatment With HMG-COA Reductase Inhibitor of Growth and Bone Abnormalities in Children With Noonan Syndrome
NCT06555237PHASE2RECRUITINGMEK Inhibitors for the Treatment of Hypertrophic Cardiomyopathy in Patients With RASopathies
NCT06668805PHASE2RECRUITINGA Study of Vosoritide in Children With Noonan Syndrome With Inadequate Growth During or After Human Growth Hormone Treatment
NCT00351221PHASE2TERMINATEDResearch Study Using Recombinant Human Insulin-Like Growth Factor-1/Recombinant Human Insulin-Like Growth Factor Binding Protein-3 for Children With Noonan Syndrome
NCT04395495Not specifiedRECRUITINGRASopathy Biorepository
NCT04463316Not specifiedRECRUITINGGROWing Up With Rare GENEtic Syndromes
NCT04888936Not specifiedRECRUITINGClinical, Genetic, and Epidemiologic Study of Children and Adults With RASopathies
NCT05202210Not specifiedRECRUITINGConstitution of a Biological Collection to Study the Pathophysiology in Noonan Syndrome
NCT05308927Not specifiedENROLLING_BY_INVITATIONFrench Registry of Children Treated With Norditropin® for Short Stature Associated With Noonan Syndrome
NCT05361811Not specifiedRECRUITINGAcceptance and Commitment Therapy for Caregivers of Children With a RASopathy: An Internal Pilot Feasibility Study and Follow-up Randomized Controlled Trial
NCT05761314Not specifiedRECRUITINGSolid Tumors in RASopathies
NCT06938542Not specifiedENROLLING_BY_INVITATIONPalliative Care Needs of Children With Rare Diseases and Their Families
NCT07259135Not specifiedNOT_YET_RECRUITINGLink Between Abnormal Bleeding and Coagulation Disorders in Noonan Syndromes
NCT07336394Not specifiedRECRUITINGPrecision Diagnosis and Risk Stratification of Rare Cardiomyopathies Based on Novel Cardiac Magnetic Resonance Techniques
NCT07464821Not specifiedRECRUITINGNational Multicentre Study on Lipid Profile in Noonan Syndrome and Related Disorders: Trends by Age, Gender and Genotype
NCT00960128Not specifiedCOMPLETEDObservational Prospective Study on Patients Treated With Norditropin®
NCT02486731Not specifiedCOMPLETEDHormonal Sensitivity in Patients With Noonan and LEOPARD Syndromes
NCT03435627Not specifiedCOMPLETEDPost Marketing Surveillance on Long-term Use With Norditropin® (Short Stature Due to Noonan Syndrome)
NCT06267807Not specifiedCOMPLETEDLymphatic Phenotype in Noonan Syndrome Spectrum Disorders
NCT06331117Not specifiedUNKNOWNEffect of RAS/MAPK Pathway Hyperactivation on Growth’ and Bone’ Profile of the RASopathies
NCT06355622Not specifiedUNKNOWNPrevalence and Characterization of Pain in RASopathies
NCT06550635Not specifiedCOMPLETEDJoint and Hematologic Disorders of Noonan Syndrome: French Descriptive Cross-sectional Study

Drugs tested across these trials (top 30)

MoleculeMax phaseTrials referencing
SOMATROPIN46
SOMAPACITAN41
VOSORITIDE41
RINFABATE21
CHEMBL421693501