recessive X-linked ichthyosis
diseaseOn this page
Also known as ichthyosis (disease), X-linkedichthyosis , X-linked, X-linked recessiveIchthyosis, X Linkedichthyosis, X-linkedRXLISSDDsteroid sulfatase deficiencyX linked ichthyosisX-linked ichthyosisX-linked recessive ichthyosisXLI
Summary
recessive X-linked ichthyosis (MONDO:0010622) is a disease caused by STS (GenCC Definitive), with 6 cohort genes and 1 clinical trial.
At a glance
- Prevalence: 1-5 / 10 000 (Europe) [Orphanet-validated]
- Causal gene: STS (GenCC Definitive)
- Cohort genes: 6
- ClinVar variants: 42
- Phenotypes (HPO): 12
- Clinical trials: 1
Clinical features
Epidemiology
Prevalence records
3 prevalence record(s), Orphanet:
| Type | Class | Value | Geography | Validation |
|---|---|---|---|---|
| Annual incidence | 1-5 / 10 000 | 15 | Europe | Validated |
| Point prevalence | 1-5 / 10 000 | 16.6 | Europe | Validated |
| Annual incidence | 1-9 / 100 000 | 9.9 | Italy | Not yet validated |
Signs & symptoms
Clinical features (HPO)
12 HPO clinical features (Orphanet curated; top 12 by frequency):
| HPO ID | Term | Frequency |
|---|---|---|
| HP:0000958 | Dry skin | Very frequent (80-99%) |
| HP:0000962 | Hyperkeratosis | Very frequent (80-99%) |
| HP:0000966 | Hypohidrosis | Very frequent (80-99%) |
| HP:0008064 | Ichthyosis | Very frequent (80-99%) |
| HP:0007018 | Attention deficit hyperactivity disorder | Frequent (30-79%) |
| HP:0007759 | Opacification of the corneal stroma | Frequent (30-79%) |
| HP:0000028 | Cryptorchidism | Occasional (5-29%) |
| HP:0000717 | Autism | Occasional (5-29%) |
| HP:0001270 | Motor delay | Occasional (5-29%) |
| HP:0002167 | Abnormality of speech or vocalization | Occasional (5-29%) |
| HP:0007549 | Desquamation of skin soon after birth | Occasional (5-29%) |
| HP:0001249 | Intellectual disability | Very rare (<1-4%) |
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | recessive X-linked ichthyosis |
| Mondo ID | MONDO:0010622 |
| OMIM | 308100 |
| Orphanet | 461 |
| DOID | DOID:1700 |
| ICD-10-CM | Q80.1 |
| ICD-11 | 1466487054 |
| NCIT | C84779 |
| SNOMED CT | 3944006 |
| UMLS | C0079588 |
| MedGen | 86937 |
| GARD | 0007904 |
| MedDRA | 10048063 |
| NORD | 1293 |
| Is cancer (heuristic) | no |
Also known as: ichthyosis (disease), X-linked · ichthyosis , X-linked, X-linked recessive · Ichthyosis, X Linked · ichthyosis, X-linked · recessive X-linked ichthyosis · RXLI · SSDD · steroid sulfatase deficiency · X linked ichthyosis · X-linked ichthyosis · X-linked recessive ichthyosis · XLI
Data availability: 42 ClinVar variants · 6 GenCC gene-disease records · 11 cell lines.
Disease family
An umbrella term covering 1 Mondo subtype.
Classification path: disease › human disease › disease by body system or component › integumentary system disorder › skin disorder › epidermal disease › ichthyosis › inherited ichthyosis › recessive X-linked ichthyosis
Related subtypes (12): congenital cataract-ichthyosis syndrome, Netherton syndrome, ichthyosis-oral and digital anomalies syndrome, neonatal ichthyosis-sclerosing cholangitis syndrome, autosomal recessive congenital ichthyosis, keratinopathic ichthyosis, peeling skin syndrome, ichthyosis vulgaris, ichthyosis linearis circumflexa, IFAP syndrome, ichthyosis hystrix, ichthyosis with erythrokeratoderma
Subtypes (1): ichthyosis, X-linked, without steroid sulfatase deficiency
Genetics & variants
GWAS landscape
No GWAS associations recorded — common-variant (GWAS) studies don’t cover this disease (typical for Mendelian / rare diseases). See the curated gene cohort and Mendelian overlap below.
Variant details and genetic-evidence tiers
ClinVar germline variants
42 retrieved; paginated sample, class counts are floors:
24 pathogenic, 7 uncertain significance, 5 likely pathogenic, 3 conflicting classifications of pathogenicity, 2 benign/likely benign, 1 not provided
| ClinVar | Variant (HGVS) | Gene | Classification | Review |
|---|---|---|---|---|
| 3363162 | Single allele | LOC106029240 | Pathogenic | criteria provided, single submitter |
| 2579751 | Single allele | LOC113875037 | Pathogenic | criteria provided, single submitter |
| 3024126 | GRCh38/hg38 Xp22.31(chrX:6989414-7926139)x0 | LOC113875037 | Pathogenic | criteria provided, single submitter |
| 188048 | NC_000023.11:g.(6560264_6560764)_(8187691_8193324)del | LOC126863198 | Pathogenic | no assertion criteria provided |
| 3765504 | NC_000023.11:g.7050286_7926129del | LOC126863198 | Pathogenic | no assertion criteria provided |
| 188050 | NC_000023.11:g.(6500268_6517018)_(7739446_7762747)del | LOC130067910 | Pathogenic | no assertion criteria provided |
| 188047 | NC_000023.11:g.(6499768_6517018)_(8187691_8193324)del | LOC130067915 | Pathogenic | no assertion criteria provided |
| 188049 | NC_000023.11:g.(6674278_6675309)_(7911900_7922037)del | MIR4767 | Pathogenic | no assertion criteria provided |
| 1300212 | GRCh37/hg19 Xp22.31(chrX:6575924-8173248)x0 | PNPLA4 | Pathogenic | criteria provided, single submitter |
| 1300213 | GRCh37/hg19 Xp22.31(chrX:6456940-8135053)x0 | PNPLA4 | Pathogenic | criteria provided, single submitter |
| 1703531 | GRCh37/hg19 Xp22.31(chrX:6954111-8058641) | PNPLA4 | Pathogenic | no assertion criteria provided |
| 2506547 | GRCh37/hg19 Xp22.31(chrX:6968337-8434424) | PNPLA4 | Pathogenic | criteria provided, single submitter |
| 4083500 | GRCh37/hg19 Xp22.31(chrX:6968337-7894160)x0 | PNPLA4 | Pathogenic | criteria provided, single submitter |
| 625682 | GRCh37/hg19 Xp22.31(chrX:6497085-8135053) | PNPLA4 | Pathogenic | criteria provided, single submitter |
| 625683 | GRCh37/hg19 Xp22.31(chrX:6497085-7910475) | PNPLA4 | Pathogenic | criteria provided, single submitter |
| 4820163 | NC_000023.10:g.(6452559_6453559)_(8136659_8137559)del | PUDP | Pathogenic | criteria provided, single submitter |
| 625642 | GRCh37/hg19 Xp22.31(chrX:6696168-7396902) | PUDP | Pathogenic | criteria provided, single submitter |
| 10552 | NM_001320752.2(STS):c.1099T>A (p.Trp367Arg) | STS | Pathogenic | no assertion criteria provided |
| 10553 | NM_001320752.2(STS):c.1322G>A (p.Cys441Tyr) | STS | Pathogenic | no assertion criteria provided |
| 10556 | NM_001320752.2(STS):c.1316A>G (p.His439Arg) | STS | Pathogenic | no assertion criteria provided |
| 10557 | NM_001320752.2(STS):c.1241+1G>T | STS | Pathogenic | no assertion criteria provided |
| 1677277 | NM_000351.4:g.(?6551155)(8032120_?)del | STS | Pathogenic | no assertion criteria provided |
| 3383027 | NM_001320752.2(STS):c.806+1G>A | STS | Pathogenic | criteria provided, single submitter |
| 625856 | NM_001320752.2(STS):c.272G>A (p.Trp91Ter) | STS | Pathogenic | criteria provided, single submitter |
| 1325152 | NM_001320752.2(STS):c.437del (p.Pro146fs) | STS | Likely pathogenic | criteria provided, single submitter |
| 1803158 | NM_001320752.2(STS):c.1108G>T (p.Gly370Cys) | STS | Likely pathogenic | criteria provided, single submitter |
| 2737074 | NM_001320752.2(STS):c.1060G>A (p.Gly354Arg) | STS | Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 3256558 | NM_001320752.2(STS):c.382G>A (p.Gly128Arg) | STS | Likely pathogenic | criteria provided, single submitter |
| 3382684 | NM_001320752.2(STS):c.1241+1G>C | STS | Likely pathogenic | criteria provided, single submitter |
| 10554 | NM_001320752.2(STS):c.1007C>T (p.Ser336Leu) | STS | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 47 · Orphanet: 20 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
GenCC gene–disease validity (cohort genes)
the Disease column is the GenCC-asserted condition — a cohort gene’s strongest validity may be for a related predisposition syndrome.
| Gene | Classification | Inheritance | Disease | Records |
|---|---|---|---|---|
| FGFR1 | Definitive | Semidominant | autosomal dominant ichthyosis vulgaris | 36 |
| FLG | Definitive | Semidominant | autosomal dominant ichthyosis vulgaris | 6 |
| STS | Definitive | X-linked | recessive X-linked ichthyosis | 5 |
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|---|---|
| STS | Orphanet:281090 | Syndromic recessive X-linked ichthyosis |
| STS | Orphanet:461 | Recessive X-linked ichthyosis |
| FGFR1 | Orphanet:168953 | Myeloid/lymphoid neoplasm associated with FGFR1 rearrangement |
| FGFR1 | Orphanet:2117 | Hartsfield syndrome |
| FGFR1 | Orphanet:220386 | Semilobar holoprosencephaly |
| FGFR1 | Orphanet:2396 | Encephalocraniocutaneous lipomatosis |
| FGFR1 | Orphanet:251576 | Gliosarcoma |
| FGFR1 | Orphanet:251579 | Giant cell glioblastoma |
| FGFR1 | Orphanet:251615 | Pilomyxoid astrocytoma |
| FGFR1 | Orphanet:2645 | Osteoglosphonic dysplasia |
| FGFR1 | Orphanet:280200 | Microform holoprosencephaly |
| FGFR1 | Orphanet:314950 | Primary hypereosinophilic syndrome |
| FGFR1 | Orphanet:3157 | Septo-optic dysplasia spectrum |
| FGFR1 | Orphanet:3366 | Non-syndromic metopic craniosynostosis |
| FGFR1 | Orphanet:432 | Normosmic congenital hypogonadotropic hypogonadism |
| FGFR1 | Orphanet:478 | Kallmann syndrome |
| FGFR1 | Orphanet:93258 | Pfeiffer syndrome type 1 |
| FGFR1 | Orphanet:93924 | Lobar holoprosencephaly |
| FGFR1 | Orphanet:99798 | Oligodontia |
| FLG | Orphanet:461 | Recessive X-linked ichthyosis |
Cohort genes → proteins
6 cohort genes, 5 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|---|
| multi_evidence | 6 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|---|---|---|---|---|
| STS | HGNC:11425 | ENSG00000101846 | P08842 | Steryl-sulfatase | gencc,clinvar |
| FGFR1 | HGNC:3688 | ENSG00000077782 | P11362 | Fibroblast growth factor receptor 1 | gencc |
| FLG | HGNC:3748 | ENSG00000143631 | P20930 | Filaggrin | gencc |
| PUDP | HGNC:16818 | ENSG00000130021 | Q08623 | Pseudouridine-5’-phosphatase | clinvar |
| PNPLA4 | HGNC:24887 | ENSG00000006757 | P41247 | Patatin-like phospholipase domain-containing protein 4 | clinvar |
| MIR4767 | HGNC:41548 | ENSG00000264268 | microRNA 4767 | clinvar |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|---|---|
| STS | Steryl-sulfatase | Catalyzes the conversion of sulfated steroid precursors, such as dehydroepiandrosterone sulfate (DHEA-S) and estrone sulfate to the free steroid. |
| FGFR1 | Fibroblast growth factor receptor 1 | Tyrosine-protein kinase that acts as a cell-surface receptor for fibroblast growth factors and plays an essential role in the regulation of embryonic development, cell proliferation, differentiation and migration. |
| FLG | Filaggrin | Aggregates keratin intermediate filaments and promotes disulfide-bond formation among the intermediate filaments during terminal differentiation of mammalian epidermis. |
| PUDP | Pseudouridine-5’-phosphatase | Dephosphorylates pseudouridine 5’-phosphate, a potential intermediate in rRNA degradation. |
| PNPLA4 | Patatin-like phospholipase domain-containing protein 4 | Has abundant triacylglycerol lipase activity. |
Protein-family classification
Druggable: 2 · Difficult: 0 · Unknown: 4 · Druggable fraction: 0.33
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|---|---|---|
| Phosphatase | 1 | 14.0× | 0.208 |
| Kinase | 1 | 4.6× | 0.297 |
| Other/Unknown | 4 | 1.2× | 0.458 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|---|---|---|---|
| STS | Phosphatase | yes | 3.1.6.2 | Sulfatase_N, Alkaline_phosphatase_core_sf, Sulfatase_CS |
| FGFR1 | Kinase | yes | 2.7.10.1 | Prot_kinase_dom, Ser-Thr/Tyr_kinase_cat_dom, Ig_sub2 |
| FLG | Other/Unknown | no | S100/CaBP7/8-like_CS, EF_hand_dom, Filaggrin | |
| PUDP | Other/Unknown | no | HAD-SF_hydro_IA, PGP-like_dom2, HAD_sf | |
| PNPLA4 | Other/Unknown | no | PNPLA_dom, Acyl_Trfase/lysoPLipase, PLPL | |
| MIR4767 | Other/Unknown | no |
Expression context
Cohort genes with no expression data: 0.
4 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 1 |
| broad (>20) | 5 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|---|
| endothelial cell | 1 |
| palpebral conjunctiva | 1 |
| placenta | 1 |
| buccal mucosa cell | 1 |
| calcaneal tendon | 1 |
| stromal cell of endometrium | 1 |
| skin of hip | 1 |
| upper arm skin | 1 |
| upper leg skin | 1 |
| mucosa of sigmoid colon | 1 |
| primordial germ cell in gonad | 1 |
| skeletal muscle tissue of rectus abdominis | 1 |
| diaphragm | 1 |
| hindlimb stylopod muscle | 1 |
| oocyte | 1 |
| caudate nucleus | 1 |
| gastrocnemius | 1 |
| minor salivary gland | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|---|---|---|---|
| STS | 259 | ubiquitous | marker | placenta, endothelial cell, palpebral conjunctiva |
| FGFR1 | 292 | ubiquitous | marker | buccal mucosa cell, stromal cell of endometrium, calcaneal tendon |
| FLG | 162 | tissue_specific | yes | upper leg skin, upper arm skin, skin of hip |
| PUDP | 273 | ubiquitous | marker | skeletal muscle tissue of rectus abdominis, primordial germ cell in gonad, mucosa of sigmoid colon |
| PNPLA4 | 276 | ubiquitous | marker | oocyte, hindlimb stylopod muscle, diaphragm |
| MIR4767 | 16 | ubiquitous | yes | gastrocnemius, minor salivary gland, caudate nucleus |
Protein interactions among cohort
Intra-cohort edges: 3.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|---|
| FGFR1 | 5,693 |
| PUDP | 2,218 |
| FLG | 2,165 |
| STS | 1,253 |
| PNPLA4 | 758 |
| MIR4767 | 0 |
Intra-cohort edges
| A | B | Sources |
|---|---|---|
| PNPLA4 | PUDP | string_interaction |
| PNPLA4 | STS | string_interaction |
| PUDP | STS | string_interaction |
Structural data
PDB: 4 · AlphaFold-only: 1 · No structure: 1
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|---|---|
| FGFR1 | P11362 | 83 |
| PUDP | Q08623 | 3 |
| STS | P08842 | 2 |
| FLG | P20930 | 1 |
AlphaFold-only cohort genes (top 30 by pLDDT)
| Symbol | UniProt | pLDDT |
|---|---|---|
| PNPLA4 | P41247 | 94.38 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 29. Enrichment computed across 6 evidence-associated genes (5 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 5 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| Signaling by FGFR1 amplification mutants | 1 | 1142.0× | 0.017 | FGFR1 |
| FGFR1c and Klotho ligand binding and activation | 1 | 571.0× | 0.017 | FGFR1 |
| Signaling by plasma membrane FGFR1 fusions | 1 | 571.0× | 0.017 | FGFR1 |
| Epithelial-Mesenchymal Transition (EMT) during gastrulation | 1 | 285.5× | 0.019 | FGFR1 |
| FGFR1b ligand binding and activation | 1 | 253.8× | 0.019 | FGFR1 |
| Pyrimidine salvage | 1 | 207.6× | 0.019 | PUDP |
| Signaling by activated point mutants of FGFR1 | 1 | 190.3× | 0.019 | FGFR1 |
| The activation of arylsulfatases | 1 | 175.7× | 0.019 | STS |
| FGFR1c ligand binding and activation | 1 | 152.3× | 0.019 | FGFR1 |
| Phospholipase C-mediated cascade: FGFR1 | 1 | 134.3× | 0.019 | FGFR1 |
| Downstream signaling of activated FGFR1 | 1 | 108.8× | 0.019 | FGFR1 |
| Metabolism of steroid hormones | 1 | 103.8× | 0.019 | STS |
| Signal transduction by L1 | 1 | 103.8× | 0.019 | FGFR1 |
| PI-3K cascade:FGFR1 | 1 | 103.8× | 0.019 | FGFR1 |
| SHC-mediated cascade:FGFR1 | 1 | 99.3× | 0.019 | FGFR1 |
| Triglyceride catabolism | 1 | 95.2× | 0.019 | PNPLA4 |
| FRS-mediated FGFR1 signaling | 1 | 91.4× | 0.019 | FGFR1 |
| Formation of paraxial mesoderm | 1 | 81.6× | 0.020 | FGFR1 |
| Negative regulation of FGFR1 signaling | 1 | 73.7× | 0.021 | FGFR1 |
| Signaling by FGFR1 in disease | 1 | 58.6× | 0.022 | FGFR1 |
| Glycosphingolipid catabolism | 1 | 58.6× | 0.022 | STS |
| Differentiation of Keratinocytes in Interfollicular Epidermis in Mammalian Skin | 1 | 55.7× | 0.022 | FLG |
| PI3K Cascade | 1 | 54.4× | 0.022 | FGFR1 |
| NCAM signaling for neurite out-growth | 1 | 54.4× | 0.022 | FGFR1 |
| Constitutive Signaling by Aberrant PI3K in Cancer | 1 | 25.4× | 0.045 | FGFR1 |
| PI5P, PP2A and IER3 Regulate PI3K/AKT Signaling | 1 | 19.4× | 0.056 | FGFR1 |
| Formation of the cornified envelope | 1 | 17.6× | 0.060 | FLG |
| PIP3 activates AKT signaling | 1 | 13.4× | 0.075 | FGFR1 |
| RAF/MAP kinase cascade | 1 | 12.2× | 0.079 | FGFR1 |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 5 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| vitamin D3 metabolic process | 1 | 1685.2× | 0.010 | FGFR1 |
| positive regulation of mitotic cell cycle DNA replication | 1 | 1685.2× | 0.010 | FGFR1 |
| positive regulation of parathyroid hormone secretion | 1 | 1685.2× | 0.010 | FGFR1 |
| regulation of extrinsic apoptotic signaling pathway in absence of ligand | 1 | 1685.2× | 0.010 | FGFR1 |
| regulation of phosphate transport | 1 | 1123.5× | 0.010 | FGFR1 |
| fibroblast growth factor receptor signaling pathway involved in orbitofrontal cortex development | 1 | 1123.5× | 0.010 | FGFR1 |
| regulation of lateral mesodermal cell fate specification | 1 | 1123.5× | 0.010 | FGFR1 |
| ventricular zone neuroblast division | 1 | 842.6× | 0.010 | FGFR1 |
| negative regulation of fibroblast growth factor production | 1 | 842.6× | 0.010 | FGFR1 |
| positive regulation of phospholipase activity | 1 | 674.1× | 0.010 | FGFR1 |
| regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling | 1 | 674.1× | 0.010 | FGFR1 |
| diphosphate metabolic process | 1 | 674.1× | 0.010 | FGFR1 |
| chordate embryonic development | 1 | 561.7× | 0.010 | FGFR1 |
| positive regulation of MAPKKK cascade by fibroblast growth factor receptor signaling pathway | 1 | 561.7× | 0.010 | FGFR1 |
| steroid catabolic process | 1 | 481.5× | 0.010 | STS |
| cementum mineralization | 1 | 481.5× | 0.010 | FGFR1 |
| nucleotide metabolic process | 1 | 374.5× | 0.011 | PUDP |
| auditory receptor cell development | 1 | 374.5× | 0.011 | FGFR1 |
| paraxial mesoderm development | 1 | 337.0× | 0.011 | FGFR1 |
| lung-associated mesenchyme development | 1 | 337.0× | 0.011 | FGFR1 |
| response to sodium phosphate | 1 | 337.0× | 0.011 | FGFR1 |
| outer ear morphogenesis | 1 | 306.4× | 0.011 | FGFR1 |
| branching involved in salivary gland morphogenesis | 1 | 280.9× | 0.012 | FGFR1 |
| organ induction | 1 | 240.7× | 0.013 | FGFR1 |
| mesenchymal cell proliferation | 1 | 224.7× | 0.014 | FGFR1 |
| cornification | 1 | 210.7× | 0.014 | FLG |
| positive regulation of endothelial cell chemotaxis | 1 | 198.3× | 0.014 | FGFR1 |
| cell projection assembly | 1 | 187.2× | 0.015 | FGFR1 |
| regulation of postsynaptic density assembly | 1 | 177.4× | 0.015 | FGFR1 |
| positive regulation of vascular endothelial cell proliferation | 1 | 168.5× | 0.015 | FGFR1 |
Therapeutics
Drug target analysis
Approved (phase 4): 2 · Phase ≥3: 2 · Phased (≥1): 2 · Undrugged: 4
Druggability breadth: 1 of 6 evidence-associated genes (17%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Genes with an approved drug
The molecule shown is one approved compound that hits the gene — not necessarily a drug of choice or one indicated for this disease.
| Symbol | Example approved molecule |
|---|---|
| STS | ESTRADIOL |
| FGFR1 | PONATINIB |
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|---|---|
| FGFR1 | 93 | 4 |
| STS | 4 | 4 |
| FLG | 0 | 0 |
| PUDP | 0 | 0 |
| PNPLA4 | 0 | 0 |
| MIR4767 | 0 | 0 |
Drugs targeting cohort genes (top 30)
| Molecule | Max phase | Targets in cohort |
|---|---|---|
| ESTRADIOL | 4 | STS |
| ESTRONE | 4 | STS |
| ESTRONE SULFURIC ACID | 4 | STS |
| PONATINIB | 4 | FGFR1 |
| PEMIGATINIB | 4 | FGFR1 |
| NINTEDANIB | 4 | FGFR1 |
| FEDRATINIB | 4 | FGFR1 |
| TIVOZANIB | 4 | FGFR1 |
| LENVATINIB | 4 | FGFR1 |
| AXITINIB | 4 | FGFR1 |
| SORAFENIB | 4 | FGFR1 |
| NICLOSAMIDE | 4 | FGFR1 |
| INFIGRATINIB PHOSPHATE | 4 | FGFR1 |
| INFIGRATINIB | 4 | FGFR1 |
| REGORAFENIB | 4 | FGFR1 |
| ENTRECTINIB | 4 | FGFR1 |
| CABOZANTINIB | 4 | FGFR1 |
| CAPIVASERTIB | 4 | FGFR1 |
| VANDETANIB | 4 | FGFR1 |
| NINTEDANIB ESYLATE | 4 | FGFR1 |
| BRIGATINIB | 4 | FGFR1 |
| ERDAFITINIB | 4 | FGFR1 |
| UPADACITINIB | 4 | FGFR1 |
| FUTIBATINIB | 4 | FGFR1 |
| PAZOPANIB | 4 | FGFR1 |
| SUNITINIB | 4 | FGFR1 |
| DASATINIB | 4 | FGFR1 |
| MIDOSTAURIN | 4 | FGFR1 |
| LINIFANIB | 3 | FGFR1 |
| SEMAXANIB | 3 | FGFR1 |
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 2.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|---|---|
| FGFR1 | 1,465 | Binding:1428, Functional:24, ADMET:13 |
| STS | 331 | Binding:330, Functional:1 |
Cohort enzymes (BRENDA EC)
| Symbol | EC numbers | Names |
|---|---|---|
| STS | 3.1.6.2 | steryl-sulfatase |
| FGFR1 | 2.7.10.1 | receptor protein-tyrosine kinase |
Cohort genes with high screening signal
≥100 ChEMBL assays — a studied-ness signal; see Therapeutics for approved-drug status.
| Symbol | ChEMBL assays |
|---|---|
| STS | 331 |
| FGFR1 | 1,465 |
Pharmacogenomics
Cohort genes with a PharmGKB record: 5; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Chemical tractability of cohort targets
30 approved/phased compounds have measured bioactivity against a cohort gene (and aren’t yet in disease-level trials). This is a research / tractability signal, NOT a therapeutic recommendation — a bioactivity row often reflects off-target or screening binding (e.g. promiscuous kinase inhibitors against a cohort kinase), implying no disease mechanism.
| Compound | Max phase | Cohort target (bioactivity) |
|---|---|---|
| ESTRADIOL | 4 | STS |
| ESTRONE | 4 | STS |
| ESTRONE SULFURIC ACID | 4 | STS |
| PONATINIB | 4 | FGFR1 |
| PEMIGATINIB | 4 | FGFR1 |
| NINTEDANIB | 4 | FGFR1 |
| FEDRATINIB | 4 | FGFR1 |
| TIVOZANIB | 4 | FGFR1 |
| LENVATINIB | 4 | FGFR1 |
| AXITINIB | 4 | FGFR1 |
| SORAFENIB | 4 | FGFR1 |
| NICLOSAMIDE | 4 | FGFR1 |
| INFIGRATINIB PHOSPHATE | 4 | FGFR1 |
| INFIGRATINIB | 4 | FGFR1 |
| REGORAFENIB | 4 | FGFR1 |
| ENTRECTINIB | 4 | FGFR1 |
| CABOZANTINIB | 4 | FGFR1 |
| CAPIVASERTIB | 4 | FGFR1 |
| VANDETANIB | 4 | FGFR1 |
| NINTEDANIB ESYLATE | 4 | FGFR1 |
| BRIGATINIB | 4 | FGFR1 |
| ERDAFITINIB | 4 | FGFR1 |
| UPADACITINIB | 4 | FGFR1 |
| FUTIBATINIB | 4 | FGFR1 |
| PAZOPANIB | 4 | FGFR1 |
| SUNITINIB | 4 | FGFR1 |
| DASATINIB | 4 | FGFR1 |
| MIDOSTAURIN | 4 | FGFR1 |
| LINIFANIB | 3 | FGFR1 |
| SEMAXANIB | 3 | FGFR1 |
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|---|---|---|
| A | Approved (phase 4 drug) | 2 | STS, FGFR1 |
| B | Phased (≥1) drug, not yet approved | 0 | |
| C | Druggable family + PDB, no drug | 0 | |
| D | Druggable family + AlphaFold only, no drug | 0 | |
| E | Difficult family or no structure, no drug | 4 | FLG, PUDP, PNPLA4, MIR4767 |
Undrugged target profiles
4 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
| Symbol | ChEMBL assays | Drugged partners (top 3) |
|---|---|---|
| PUDP | 0 | STS |
| FLG | 0 | — |
| PNPLA4 | 0 | — |
| MIR4767 | 0 | — |
Clinical trials & evidence
Clinical trials
Clinical trials: 1.
Phase distribution (across all retrieved trials)
| Phase | Trials |
|---|---|
| Not specified | 1 |
Top trials by phase / activity
| NCT | Phase | Status | Title |
|---|---|---|---|
| NCT00074685 | Not specified | COMPLETED | National Registry for Ichthyosis and Related Disorders |