Sandhoff disease
diseaseOn this page
Also known as GM2 gangliosidosis 0 variantGM2 gangliosidosis, 0 variantHexosaminidases A and B deficiencySandhoff Jatzkewitz disease
Summary
Sandhoff disease (MONDO:0010006) is a disease caused by HEXB (GenCC Definitive), with 3 cohort genes and 16 clinical trials. Top therapeutic interventions include miglustat, busulfan, and cyclophosphamide anhydrous.
At a glance
- Prevalence: 1-9 / 1 000 000 (Europe) [Orphanet-validated]
- Causal gene: HEXB (GenCC Definitive)
- Cohort genes: 3
- ClinVar variants: 828
- Phenotypes (HPO): 19
- Clinical trials: 16
Clinical features
Epidemiology
Prevalence records
9 prevalence record(s), Orphanet:
| Type | Class | Value | Geography | Validation |
|---|---|---|---|---|
| Prevalence at birth | 1-9 / 1 000 000 | 0.67 | Europe | Validated |
| Prevalence at birth | 1-9 / 100 000 | 1.49 | Portugal | Validated |
| Prevalence at birth | 1-9 / 1 000 000 | 0.34 | Netherlands | Validated |
| Prevalence at birth | 1-9 / 1 000 000 | 0.19 | Czech Republic | Validated |
| Prevalence at birth | 1-9 / 1 000 000 | 0.26 | Australia | Validated |
| Prevalence at birth | 1-9 / 1 000 000 | 0.95 | Turkey | Validated |
| Prevalence at birth | 1-9 / 1 000 000 | 0.3 | United States | Validated |
| Prevalence at birth | 1-9 / 1 000 000 | 0.38 | Sweden | Validated |
| Point prevalence | 1-9 / 1 000 000 | Europe | Not yet validated |
Signs & symptoms
Clinical features (HPO)
19 HPO clinical features (Orphanet curated; top 19 by frequency):
| HPO ID | Term | Frequency |
|---|---|---|
| HP:0000256 | Macrocephaly | Very frequent (80-99%) |
| HP:0000365 | Hearing impairment | Very frequent (80-99%) |
| HP:0000618 | Blindness | Very frequent (80-99%) |
| HP:0001250 | Seizure | Very frequent (80-99%) |
| HP:0001251 | Ataxia | Very frequent (80-99%) |
| HP:0001508 | Failure to thrive | Very frequent (80-99%) |
| HP:0002333 | Motor deterioration | Very frequent (80-99%) |
| HP:0002808 | Kyphosis | Very frequent (80-99%) |
| HP:0004343 | Abnormal glycosphingolipid metabolism | Very frequent (80-99%) |
| HP:0007272 | Progressive psychomotor deterioration | Very frequent (80-99%) |
| HP:0010729 | Cherry red spot of the macula | Very frequent (80-99%) |
| HP:0100022 | Abnormality of movement | Very frequent (80-99%) |
| HP:0000293 | Full cheeks | Frequent (30-79%) |
| HP:0001324 | Muscle weakness | Frequent (30-79%) |
| HP:0001744 | Splenomegaly | Frequent (30-79%) |
| HP:0002205 | Recurrent respiratory infections | Frequent (30-79%) |
| HP:0002240 | Hepatomegaly | Frequent (30-79%) |
| HP:0001635 | Congestive heart failure | Occasional (5-29%) |
| HP:0002652 | Skeletal dysplasia | Occasional (5-29%) |
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | Sandhoff disease |
| Mondo ID | MONDO:0010006 |
| MeSH | D012497 |
| OMIM | 268800 |
| Orphanet | 796 |
| DOID | DOID:3323 |
| ICD-10-CM | E75.01 |
| ICD-11 | 708581915 |
| NCIT | C85052 |
| SNOMED CT | 23849003 |
| UMLS | C0036161 |
| MedGen | 11313 |
| GARD | 0002521 |
| NORD | 1688 |
| Is cancer (heuristic) | no |
Also known as: GM2 gangliosidosis 0 variant · GM2 gangliosidosis, 0 variant · Hexosaminidases A and B deficiency · Sandhoff disease · Sandhoff Jatzkewitz disease
Data availability: 828 ClinVar variants · 6 GenCC gene-disease records · 14 cell lines.
Disease family
An umbrella term covering 3 Mondo subtypes.
Classification path: disease › human disease › disease by body system or component › disorder of orbital region › eye disorder › Sandhoff disease
Related subtypes (119): ptosis, eye accommodation disease, corneal disorder, asthenopia, lens disorder, keratomalacia, scleral disorder, ocular siderosis, coloboma, luxation of globe, mucopolysaccharidosis type 1, lacrimal apparatus disorder, Foster-Kennedy syndrome, anterior dislocation of lens, uveal disorder, eyelid disorder, ocular hypotension, scotoma, exophthalmos, ophthalmia nodosa, eye degenerative disorder, refractive error, glaucoma, retinal disorder, eye allergy, ocular vascular disorder, optic neuritis, conjunctival disorder, ocular hypertension, Tietz syndrome, Alagille syndrome, glaucoma-sleep apnea syndrome, Marshall syndrome, microcornea-glaucoma-absent frontal sinuses syndrome, nail-patella syndrome, oculodentodigital dysplasia, piebaldism, Sturge-Weber syndrome, cerebrotendinous xanthomatosis, ocular cystinosis, alpha-mannosidosis, megalocornea-intellectual disability syndrome, mucolipidosis type IV, mucopolysaccharidosis type 6, Netherton syndrome, galactosialidosis, Niemann-Pick disease type A, ocular motor apraxia, Cogan type, Peters plus syndrome, isolated Pierre-Robin syndrome, ectodermal dysplasia-blindness syndrome, SHORT syndrome, Sjogren-Larsson syndrome, Smith-Lemli-Opitz syndrome, Tay-Sachs disease, tyrosinemia type II, Ito hypomelanosis, X-linked cone dysfunction syndrome with myopia, red color blindness, oculocerebrorenal syndrome, Lowry-MacLean syndrome, pigment dispersion syndrome, hereditary hyperferritinemia with congenital cataracts, dyssegmental dysplasia-glaucoma syndrome, mevalonic aciduria, familial cavitary optic disk anomaly, blindness - scoliosis - arachnodactyly syndrome, fatty acyl-CoA reductase 1 deficiency, microcephaly-intellectual disability-sensorineural hearing loss-epilepsy-abnormal muscle tone syndrome, neurotrophic keratopathy, Cogan syndrome, atopic keratoconjunctivitis, rhizomelic chondrodysplasia punctata, Ehlers-Danlos syndrome, kyphoscoliotic type 1, IRVAN syndrome, Rothmund-Thomson syndrome type 2, microcornea-corectopia-macular hypoplasia syndrome, isolated anophthalmia-microphthalmia syndrome, Spasmus nutans, toxic maculopathy due to antimalarial drugs, syndromic recessive X-linked ichthyosis, acute zonal occult outer retinopathy, acute annular outer retinopathy, phakomatosis pigmentovascularis, lamellar ichthyosis, idiopathic linear interstitial keratitis, chondroectodermal dysplasia with night blindness, galactosemia, GM1 gangliosidosis, Gaucher disease, visual snow syndrome, extensive peripapillary myelinated nerve fibers, IgG4-related ophthalmic disorder, global developmental delay-visual anomalies-progressive cerebellar atrophy-truncal hypotonia syndrome, vernal keratoconjunctivitis, Gardner syndrome, anterior segment dysgenesis, isolated ankyloblepharon filiforme adnatum, hereditary optic neuropathy, essential strabismus, Axenfeld anomaly, eye neoplasm, isolated blepharochalasis, punctate inner choroidopathy, eye infectious disorder, vitreous body disorder, 9q33.3q34.11 microdeletion syndrome, autoimmune/inflammatory optic neuropathy, LTBP2-related ocular dysgenesis, ocular growth disorder, ocular dysgenesis caused by defects in PAX6 regulation, choroidal neovascularization, anterior segment developmental abnormality with extraocular manifestations, congenital optic disk excavation, neuroocular syndrome, isolated angioid streaks, multiple evanescent white dot syndrome, stellate multiform amelanotic choroidopathy, macular telangiectasia
Subtypes (3): Sandhoff disease, infantile form, Sandhoff disease, juvenile form, Sandhoff disease, adult form
Genetics & variants
GWAS landscape
No GWAS associations recorded — common-variant (GWAS) studies don’t cover this disease (typical for Mendelian / rare diseases). See the curated gene cohort and Mendelian overlap below.
Variant details and genetic-evidence tiers
ClinVar germline variants
600 retrieved; paginated sample, class counts are floors:
345 likely benign, 91 uncertain significance, 67 pathogenic, 42 likely pathogenic, 21 pathogenic/likely pathogenic, 16 conflicting classifications of pathogenicity, 14 benign, 3 benign/likely benign, 1 likely benign; other
| ClinVar | Variant (HGVS) | Gene | Classification | Review |
|---|---|---|---|---|
| 2423202 | NC_000005.9:g.(?73980960)(74041702_?)del | GFM2 | Pathogenic | criteria provided, single submitter |
| 1012509 | NM_000521.4(HEXB):c.876del (p.His294fs) | HEXB | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 1012510 | NM_000521.4(HEXB):c.1165dup (p.Gln389fs) | HEXB | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 1067213 | NM_000521.4(HEXB):c.1563_1573del (p.Met522fs) | HEXB | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 1069640 | NM_000521.4(HEXB):c.1144A>T (p.Lys382Ter) | HEXB | Pathogenic | criteria provided, single submitter |
| 1070002 | NM_000521.4(HEXB):c.1156_1159del (p.Phe386fs) | HEXB | Pathogenic | criteria provided, single submitter |
| 1070441 | NM_000521.4(HEXB):c.1017_1018del (p.Glu339fs) | HEXB | Pathogenic | criteria provided, single submitter |
| 1070612 | NC_000005.9:g.(?73981066)(74017020_?)del | HEXB | Pathogenic | criteria provided, single submitter |
| 1070645 | NM_000521.4(HEXB):c.782_785del (p.Ser261fs) | HEXB | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 1071217 | NM_000521.4(HEXB):c.1578T>G (p.Tyr526Ter) | HEXB | Pathogenic | criteria provided, single submitter |
| 1073343 | NM_000521.4(HEXB):c.1299_1303del (p.Arg435fs) | HEXB | Pathogenic | criteria provided, single submitter |
| 1074051 | NM_000521.4(HEXB):c.1389_1393del (p.Tyr463_Lys465delinsTer) | HEXB | Pathogenic | criteria provided, single submitter |
| 1074772 | NM_000521.4(HEXB):c.1586_1589del (p.Leu529fs) | HEXB | Pathogenic | criteria provided, single submitter |
| 1301333 | NM_000521.4(HEXB):c.1598G>A (p.Arg533His) | HEXB | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 1375497 | NM_000521.4(HEXB):c.452T>A (p.Leu151Ter) | HEXB | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 1379520 | NM_000521.4(HEXB):c.1264dup (p.Glu422fs) | HEXB | Pathogenic | criteria provided, single submitter |
| 1398058 | NM_000521.4(HEXB):c.916_917del (p.Leu306fs) | HEXB | Pathogenic | criteria provided, single submitter |
| 1405131 | NC_000005.9:g.(?74011325)(74017010_?)del | HEXB | Pathogenic | criteria provided, single submitter |
| 1415401 | NM_000521.4(HEXB):c.1278_1279del (p.Asp426fs) | HEXB | Pathogenic | criteria provided, single submitter |
| 1423387 | NM_000521.4(HEXB):c.926G>A (p.Cys309Tyr) | HEXB | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 1442270 | NM_000521.4(HEXB):c.731del (p.Phe244fs) | HEXB | Pathogenic | criteria provided, single submitter |
| 1450108 | NM_000521.4(HEXB):c.1159_1160insTTTTTTTTTTTTTTTTTTTNNNNNNNNNNTTTTTCTTTTCCTTTTATTTTATTTTTTGAGACGGAGTCTTGCTCTGTTGTCTGGGTGGAGTGCAGTGGTGCAATCTCGGCTCACTGCAACCTCTTCCTCCCAGGTTGAAGCGGAAACTAGAATCTTTCT (p.Tyr387delinsPhePhePhePhePhePheXaaXaaXaaXaaPhePhePheSerPheTyrPheIlePheTer) | HEXB | Pathogenic | criteria provided, single submitter |
| 1454030 | NM_000521.4(HEXB):c.1024del (p.Glu342fs) | HEXB | Pathogenic | criteria provided, single submitter |
| 1455054 | NC_000005.9:g.(?73985143)(74014806_?)del | HEXB | Pathogenic | criteria provided, single submitter |
| 1458169 | NM_000521.4(HEXB):c.1404del (p.Asp470fs) | HEXB | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 1458290 | NM_000521.4(HEXB):c.1303_1304insT (p.Arg435fs) | HEXB | Pathogenic | criteria provided, single submitter |
| 1459374 | NM_000521.4(HEXB):c.992_993insAGTATGTA (p.Ser331fs) | HEXB | Pathogenic | criteria provided, single submitter |
| 1704505 | NC_000005.9:g.(?73980968)(73992932_74001043)del | HEXB | Pathogenic | criteria provided, single submitter |
| 1726024 | NM_000521.4(HEXB):c.341_342del (p.Glu114fs) | HEXB | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 1726081 | NM_000521.4(HEXB):c.1434dup (p.Gln479fs) | HEXB | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 6 · Orphanet: 4 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
GenCC gene–disease validity (cohort genes)
the Disease column is the GenCC-asserted condition — a cohort gene’s strongest validity may be for a related predisposition syndrome.
| Gene | Classification | Inheritance | Disease | Records |
|---|---|---|---|---|
| HEXB | Definitive | Autosomal recessive | Sandhoff disease | 6 |
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|---|---|
| HEXB | Orphanet:309155 | Sandhoff disease, infantile form |
| HEXB | Orphanet:309162 | Sandhoff disease, juvenile form |
| HEXB | Orphanet:309169 | Sandhoff disease, adult form |
| GFM2 | Orphanet:565624 | Combined oxidative phosphorylation defect type 39 |
Cohort genes → proteins
3 cohort genes, 3 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|---|
| multi_evidence | 3 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|---|---|---|---|---|
| HEXB | HGNC:4879 | ENSG00000049860 | P07686 | Beta-hexosaminidase subunit beta | gencc,clinvar |
| GFM2 | HGNC:29682 | ENSG00000164347 | Q969S9 | Ribosome-releasing factor 2, mitochondrial | clinvar |
| ANKDD1B | HGNC:32525 | ENSG00000189045 | A6NHY2 | Ankyrin repeat and death domain-containing protein 1B | clinvar |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|---|---|
| HEXB | Beta-hexosaminidase subunit beta | Hydrolyzes the non-reducing end N-acetyl-D-hexosamine and/or sulfated N-acetyl-D-hexosamine of glycoconjugates, such as the oligosaccharide moieties from proteins and neutral glycolipids, or from certain mucopolysaccharides. |
| GFM2 | Ribosome-releasing factor 2, mitochondrial | Mitochondrial GTPase that mediates the disassembly of ribosomes from messenger RNA at the termination of mitochondrial protein biosynthesis. |
Protein-family classification
Druggable: 1 · Difficult: 1 · Unknown: 1 · Druggable fraction: 0.33
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|---|---|---|
| Scaffold/PPI | 1 | 5.8× | 0.345 |
| Enzyme (other) | 1 | 4.0× | 0.345 |
| Other/Unknown | 1 | 0.6× | 0.914 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|---|---|---|---|
| HEXB | Enzyme (other) | yes | 3.2.1.52 | GH20_cat, GH_hydrolase_sf, GH20 |
| GFM2 | Other/Unknown | no | EFG_V-like, T_Tr_GTP-bd_dom, Small_GTP-bd | |
| ANKDD1B | Scaffold/PPI | no | Death_dom, Ankyrin_rpt, DEATH-like_dom_sf |
Expression context
Cohort genes with no expression data: 0.
3 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 0 |
| broad (>20) | 3 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|---|
| calcaneal tendon | 1 |
| placenta | 1 |
| stromal cell of endometrium | 1 |
| bronchial epithelial cell | 1 |
| left ventricle myocardium | 1 |
| tibialis anterior | 1 |
| male germ line stem cell (sensu Vertebrata) in testis | 1 |
| olfactory segment of nasal mucosa | 1 |
| right uterine tube | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|---|---|---|---|
| HEXB | 289 | ubiquitous | marker | placenta, stromal cell of endometrium, calcaneal tendon |
| GFM2 | 262 | ubiquitous | marker | left ventricle myocardium, tibialis anterior, bronchial epithelial cell |
| ANKDD1B | 132 | marker | right uterine tube, male germ line stem cell (sensu Vertebrata) in testis, olfactory segment of nasal mucosa |
Protein interactions among cohort
Intra-cohort edges: 0.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|---|
| HEXB | 2,557 |
| GFM2 | 1,997 |
| ANKDD1B | 1,056 |
Structural data
PDB: 2 · AlphaFold-only: 1 · No structure: 0
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|---|---|
| HEXB | P07686 | 8 |
| GFM2 | Q969S9 | 2 |
AlphaFold-only cohort genes (top 30 by pLDDT)
| Symbol | UniProt | pLDDT |
|---|---|---|
| ANKDD1B | A6NHY2 | 83.90 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 10. Enrichment computed across 3 evidence-associated genes (2 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 2 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| Defective HEXB causes GM2G2 (Hyaluronan metabolism) | 1 | 5710.0× | 0.002 | HEXB |
| Keratan sulfate degradation | 1 | 356.9× | 0.009 | HEXB |
| Hyaluronan degradation | 1 | 356.9× | 0.009 | HEXB |
| CS/DS degradation | 1 | 271.9× | 0.009 | HEXB |
| Glycosphingolipid catabolism | 1 | 146.4× | 0.014 | HEXB |
| Mitochondrial translation | 1 | 68.8× | 0.024 | GFM2 |
| Mitochondrial translation termination | 1 | 54.9× | 0.026 | GFM2 |
| Translation | 1 | 31.0× | 0.040 | GFM2 |
| Neutrophil degranulation | 1 | 11.5× | 0.094 | HEXB |
| Metabolism of proteins | 1 | 6.2× | 0.155 | GFM2 |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 3 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| male courtship behavior | 1 | 5617.3× | 0.005 | HEXB |
| dermatan sulfate proteoglycan catabolic process | 1 | 1404.3× | 0.006 | HEXB |
| mitochondrial translational termination | 1 | 1123.5× | 0.006 | GFM2 |
| chondroitin sulfate proteoglycan catabolic process | 1 | 936.2× | 0.006 | HEXB |
| glycosaminoglycan metabolic process | 1 | 802.5× | 0.006 | HEXB |
| astrocyte cell migration | 1 | 802.5× | 0.006 | HEXB |
| ganglioside catabolic process | 1 | 624.1× | 0.006 | HEXB |
| penetration of zona pellucida | 1 | 510.7× | 0.006 | HEXB |
| oligosaccharide catabolic process | 1 | 510.7× | 0.006 | HEXB |
| N-acetylglucosamine metabolic process | 1 | 401.2× | 0.007 | HEXB |
| hyaluronan catabolic process | 1 | 330.4× | 0.007 | HEXB |
| ribosome disassembly | 1 | 330.4× | 0.007 | GFM2 |
| N-glycan processing | 1 | 244.2× | 0.009 | HEXB |
| phospholipid biosynthetic process | 1 | 224.7× | 0.009 | HEXB |
| lipid storage | 1 | 181.2× | 0.011 | HEXB |
| neuron cellular homeostasis | 1 | 151.8× | 0.012 | HEXB |
| oogenesis | 1 | 127.7× | 0.013 | HEXB |
| neuromuscular process controlling balance | 1 | 110.1× | 0.015 | HEXB |
| lysosome organization | 1 | 102.1× | 0.015 | HEXB |
| myelination | 1 | 83.8× | 0.017 | HEXB |
| single fertilization | 1 | 61.1× | 0.022 | HEXB |
| locomotory behavior | 1 | 59.8× | 0.022 | HEXB |
| mitochondrial translation | 1 | 57.9× | 0.022 | GFM2 |
| intracellular calcium ion homeostasis | 1 | 48.4× | 0.025 | HEXB |
| skeletal system development | 1 | 41.9× | 0.027 | HEXB |
| regulation of cell shape | 1 | 41.0× | 0.027 | HEXB |
| sensory perception of sound | 1 | 33.6× | 0.032 | HEXB |
| signal transduction | 1 | 5.3× | 0.182 | ANKDD1B |
| positive regulation of transcription by RNA polymerase II | 1 | 5.0× | 0.188 | HEXB |
Therapeutics
Drugs indicated for this disease
0 approved, 2 in late-stage (phase 3) trials. Disease-direct ChEMBL indications, not inferred from the associated-gene cohort below.
| Drug | Development status |
|---|---|
| Miglustat | Phase 3 (in late-stage trials) |
| Venglustat | Phase 3 (in late-stage trials) |
Earlier-phase candidates (phase 2, investigational — efficacy not yet established): Busulfan, Trenonacog Alfa.
Drug target analysis
Approved (phase 4): 1 · Phase ≥3: 1 · Phased (≥1): 1 · Undrugged: 2
Druggability breadth: 1 of 3 evidence-associated genes (33%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Genes with an approved drug
The molecule shown is one approved compound that hits the gene — not necessarily a drug of choice or one indicated for this disease.
| Symbol | Example approved molecule |
|---|---|
| HEXB | PYRIMETHAMINE |
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|---|---|
| HEXB | 1 | 4 |
| GFM2 | 0 | 0 |
| ANKDD1B | 0 | 0 |
Drugs targeting cohort genes (top 30)
| Molecule | Max phase | Targets in cohort |
|---|---|---|
| PYRIMETHAMINE | 4 | HEXB |
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 1.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|---|---|
| HEXB | 53 | Binding:53 |
Cohort enzymes (BRENDA EC)
| Symbol | EC numbers | Names |
|---|---|---|
| HEXB | 3.2.1.52 | beta-N-acetylhexosaminidase |
Pharmacogenomics
Cohort genes with a PharmGKB record: 3; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Chemical tractability of cohort targets
0 approved/phased compounds have measured bioactivity against a cohort gene (and aren’t yet in disease-level trials). This is a research / tractability signal, NOT a therapeutic recommendation — a bioactivity row often reflects off-target or screening binding (e.g. promiscuous kinase inhibitors against a cohort kinase), implying no disease mechanism.
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|---|---|---|
| A | Approved (phase 4 drug) | 1 | HEXB |
| B | Phased (≥1) drug, not yet approved | 0 | |
| C | Druggable family + PDB, no drug | 0 | |
| D | Druggable family + AlphaFold only, no drug | 0 | |
| E | Difficult family or no structure, no drug | 2 | GFM2, ANKDD1B |
Undrugged target profiles
2 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
| Symbol | ChEMBL assays | Drugged partners (top 3) |
|---|---|---|
| GFM2 | 0 | — |
| ANKDD1B | 0 | — |
Clinical trials & evidence
Clinical trials
Clinical trials: 16.
Phase distribution (across all retrieved trials)
| Phase | Trials |
|---|---|
| Not specified | 7 |
| PHASE3 | 2 |
| PHASE1/PHASE2 | 2 |
| PHASE1 | 2 |
| PHASE4 | 1 |
| PHASE2/PHASE3 | 1 |
| PHASE2 | 1 |
Top trials by phase / activity
| NCT | Phase | Status | Title |
|---|---|---|---|
| NCT02030015 | PHASE4 | TERMINATED | Synergistic Enteral Regimen for Treatment of the Gangliosidoses |
| NCT00176904 | PHASE2/PHASE3 | COMPLETED | Stem Cell Transplant for Inborn Errors of Metabolism |
| NCT00672022 | PHASE3 | COMPLETED | Pharmacokinetics, Safety and Tolerability of Zavesca (Miglustat) in Patients With Infantile Onset Gangliosidosis: Single and Steady State Oral Doses |
| NCT04221451 | PHASE3 | TERMINATED | A Multinational, Randomized, Double-blind, Placebo-controlled Study to Assess the Efficacy, Pharmacodynamics, Pharmacokinetics, and Safety of Venglustat in Late-onset GM2 |
| NCT01102686 | PHASE1/PHASE2 | COMPLETED | Pyrimethamine as a Treatment for Late-Onset GM2-gangliosidosis (Tay-Sachs and Sandhoff Disease) |
| NCT01372228 | PHASE1/PHASE2 | TERMINATED | Phase I/II Pilot Study of Mixed Chimerism to Treat Inherited Metabolic Disorders |
| NCT03759665 | PHASE2 | COMPLETED | N-Acetyl-L-Leucine for GM2 Gangliosidosis (Tay-Sachs and Sandhoff Disease) |
| NCT02254863 | PHASE1 | RECRUITING | UCB Transplant of Inherited Metabolic Diseases With Administration of Intrathecal UCB Derived Oligodendrocyte-Like Cells |
| NCT04669535 | PHASE1 | TERMINATED | A Dose-escalation and Safety & Efficacy Study of AXO-AAV-GM2 in Tay-Sachs or Sandhoff Disease |
| NCT00668187 | Not specified | RECRUITING | A Natural History Study of the Gangliosidoses |
| NCT03333200 | Not specified | RECRUITING | Longitudinal Study of Neurodegenerative Disorders |
| NCT06614569 | Not specified | ACTIVE_NOT_RECRUITING | Long-Term Follow-Up of Subjects Treated With AXO-AAV-GM2 for Tay-Sachs or Sandhoff Disease |
| NCT01869270 | Not specified | COMPLETED | Gene Therapy for Tay-Sachs Disease |
| NCT04470713 | Not specified | COMPLETED | Natural History Study for Pediatric Patients With Early Onset of Either GM1 Gangliosidosis, GM2 Gangliosidoses, or Gaucher Disease Type 2 |
| NCT04624789 | Not specified | UNKNOWN | Registry Gangliosidoses |
| NCT05109793 | Not specified | COMPLETED | GM1 and GM2 Gangliosidosis PROspective Neurological Disease TrajectOry Study (PRONTO) |
Drugs tested across these trials (top 30)
| Molecule | Max phase | Trials referencing |
|---|---|---|
| MIGLUSTAT | 4 | 2 |
| BUSULFAN | 4 | 1 |
| CYCLOPHOSPHAMIDE ANHYDROUS | 4 | 1 |
| LEVACETYLLEUCINE | 4 | 1 |
| PYRIMETHAMINE | 4 | 1 |
| TRENONACOG ALFA | 3 | 1 |
| VENGLUSTAT | 3 | 1 |
| GILAVEBEXAGENE ANVUPARVOVEC | 1 | 1 |
Related Atlas pages
- Cohort genes: HEXB, GFM2, ANKDD1B
- Drugs: Miglustat, Busulfan, Cyclophosphamide, Pyrimethamine, Trenonacog Alfa, Venglustat