Variegate porphyria
diseaseOn this page
Also known as porphyria variegateProtocoproporphyriaprotoporphyrinogen oxidase deficiencyVP
Summary
Variegate porphyria (MONDO:0008297) is a disease caused by PPOX (GenCC Definitive), with 5 cohort genes and 6 clinical trials. Top therapeutic interventions include afamelanotide, hemin, and givosiran.
At a glance
- Prevalence: 1-9 / 1 000 000 (France) [Orphanet-validated]
- Causal gene: PPOX (GenCC Definitive)
- Cohort genes: 5
- ClinVar variants: 77
- Phenotypes (HPO): 48
- Clinical trials: 6
Clinical features
Epidemiology
Prevalence records
22 prevalence record(s), Orphanet, top 20 (validated / broadest geography first):
| Type | Class | Value | Geography | Validation |
|---|---|---|---|---|
| Annual incidence | <1 / 1 000 000 | 0.012 | France | Validated |
| Annual incidence | <1 / 1 000 000 | 0.006 | Finland | Validated |
| Annual incidence | <1 / 1 000 000 | 0.016 | Ireland | Validated |
| Annual incidence | <1 / 1 000 000 | 0.006 | Italy | Validated |
| Annual incidence | <1 / 1 000 000 | 0.006 | Netherlands | Validated |
| Annual incidence | <1 / 1 000 000 | 0.007 | Norway | Validated |
| Annual incidence | <1 / 1 000 000 | 0.004 | Spain | Validated |
| Annual incidence | <1 / 1 000 000 | 0.011 | Sweden | Validated |
| Annual incidence | <1 / 1 000 000 | 0.026 | Switzerland | Validated |
| Annual incidence | <1 / 1 000 000 | 0.008 | United Kingdom | Validated |
| Point prevalence | 1-9 / 1 000 000 | 0.48 | France | Validated |
| Point prevalence | 1-9 / 1 000 000 | 0.24 | Finland | Validated |
| Point prevalence | 1-9 / 1 000 000 | 0.64 | Ireland | Validated |
| Point prevalence | 1-9 / 1 000 000 | 0.24 | Netherlands | Validated |
| Point prevalence | 1-9 / 1 000 000 | 0.24 | Italy | Validated |
| Point prevalence | 1-9 / 1 000 000 | 0.28 | Norway | Validated |
| Point prevalence | 1-9 / 1 000 000 | 0.16 | Spain | Validated |
| Point prevalence | 1-9 / 1 000 000 | 0.44 | Sweden | Validated |
| Point prevalence | 1-9 / 100 000 | 1.04 | Switzerland | Validated |
| Point prevalence | 1-9 / 1 000 000 | 0.32 | United Kingdom | Validated |
Signs & symptoms
Clinical features (HPO)
48 HPO clinical features (Orphanet curated; top 48 by frequency):
| HPO ID | Term | Frequency |
|---|---|---|
| HP:0002027 | Abdominal pain | Very frequent (80-99%) |
| HP:0010472 | Abnormal circulating porphyrin concentration | Very frequent (80-99%) |
| HP:0010473 | Porphyrinuria | Very frequent (80-99%) |
| HP:0012217 | Increased urinary porphobilinogen | Very frequent (80-99%) |
| HP:0012379 | Abnormal enzyme/coenzyme activity | Very frequent (80-99%) |
| HP:0000707 | Abnormality of the nervous system | Frequent (30-79%) |
| HP:0000708 | Atypical behavior | Frequent (30-79%) |
| HP:0000739 | Anxiety | Frequent (30-79%) |
| HP:0000992 | Cutaneous photosensitivity | Frequent (30-79%) |
| HP:0001324 | Muscle weakness | Frequent (30-79%) |
| HP:0002019 | Constipation | Frequent (30-79%) |
| HP:0002273 | Tetraparesis | Frequent (30-79%) |
| HP:0003163 | Elevated urinary delta-aminolevulinic acid | Frequent (30-79%) |
| HP:0003418 | Back pain | Frequent (30-79%) |
| HP:0007178 | Motor polyneuropathy | Frequent (30-79%) |
| HP:0008066 | Abnormal blistering of the skin | Frequent (30-79%) |
| HP:0008997 | Proximal muscle weakness in upper limbs | Frequent (30-79%) |
| HP:0100749 | Chest pain | Frequent (30-79%) |
| HP:0200037 | Skin vesicle | Frequent (30-79%) |
| HP:0200041 | Skin erosion | Frequent (30-79%) |
| HP:0000011 | Neurogenic bladder | Occasional (5-29%) |
| HP:0000822 | Hypertension | Occasional (5-29%) |
| HP:0000953 | Hyperpigmentation of the skin | Occasional (5-29%) |
| HP:0000998 | Hypertrichosis | Occasional (5-29%) |
| HP:0001010 | Hypopigmentation of the skin | Occasional (5-29%) |
| HP:0001056 | Milia | Occasional (5-29%) |
| HP:0001072 | Thickened skin | Occasional (5-29%) |
| HP:0001250 | Seizure | Occasional (5-29%) |
| HP:0001265 | Hyporeflexia | Occasional (5-29%) |
| HP:0001347 | Hyperreflexia | Occasional (5-29%) |
| HP:0001649 | Tachycardia | Occasional (5-29%) |
| HP:0002018 | Nausea | Occasional (5-29%) |
| HP:0002203 | Respiratory paralysis | Occasional (5-29%) |
| HP:0002595 | Ileus | Occasional (5-29%) |
| HP:0002902 | Hyponatremia | Occasional (5-29%) |
| HP:0002910 | Elevated circulating hepatic transaminase concentration | Occasional (5-29%) |
| HP:0003474 | Somatic sensory dysfunction | Occasional (5-29%) |
| HP:0011355 | Localized skin lesion | Occasional (5-29%) |
| HP:0012332 | Abnormal autonomic nervous system physiology | Occasional (5-29%) |
| HP:0031218 | Inappropriate antidiuretic hormone secretion | Occasional (5-29%) |
| HP:0100699 | Scarring | Occasional (5-29%) |
| HP:0000738 | Hallucinations | Very rare (<1-4%) |
| HP:0001259 | Coma | Very rare (<1-4%) |
| HP:0001392 | Abnormality of the liver | Very rare (<1-4%) |
| HP:0001402 | Hepatocellular carcinoma | Very rare (<1-4%) |
| HP:0001903 | Anemia | Very rare (<1-4%) |
| HP:0011999 | Paranoia | Very rare (<1-4%) |
| HP:0012622 | Chronic kidney disease | Very rare (<1-4%) |
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | variegate porphyria |
| Mondo ID | MONDO:0008297 |
| MeSH | D046350 |
| OMIM | 176200 |
| Orphanet | 79473 |
| DOID | DOID:4346 |
| ICD-11 | 1227474618 |
| NCIT | C85219 |
| SNOMED CT | 58275005 |
| UMLS | C0162532 |
| MedGen | 58118 |
| GARD | 0007848 |
| NORD | 1821 |
| Is cancer (heuristic) | no |
Also known as: porphyria variegate · Protocoproporphyria · protoporphyrinogen oxidase deficiency · variegate porphyria · VP
Data availability: 77 ClinVar variants · 6 GenCC gene-disease records · 1 cell line.
Disease family
An umbrella term covering 1 Mondo subtype.
Classification path: disease › human disease › disease by body system or component › digestive system disorder › hepatobiliary disorder › liver disorder › hepatic porphyria › PPOX-related hepatic porphyria › variegate porphyria
Subtypes (1): variegate porphyria, childhood-onset
Genetics & variants
GWAS landscape
No GWAS associations recorded — common-variant (GWAS) studies don’t cover this disease (typical for Mendelian / rare diseases). See the curated gene cohort and Mendelian overlap below.
Variant details and genetic-evidence tiers
ClinVar germline variants
77 retrieved; paginated sample, class counts are floors:
28 uncertain significance, 15 conflicting classifications of pathogenicity, 11 pathogenic, 7 likely pathogenic, 5 pathogenic/likely pathogenic, 5 benign/likely benign, 3 benign, 1 conflicting classifications of pathogenicity; other, 1 likely benign, 1 conflicting classifications of pathogenicity; other; risk factor
| ClinVar | Variant (HGVS) | Gene | Classification | Review |
|---|---|---|---|---|
| 559476 | Single allele | Pathogenic | criteria provided, single submitter | |
| 2500825 | NM_001122764.3(PPOX):c.420del (p.Glu141fs) | B4GALT3 | Pathogenic | criteria provided, single submitter |
| 1065637 | NM_000410.4(HFE):c.1006+1G>A | HFE | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 407079 | NM_000410.4(HFE):c.546_547del (p.Leu183fs) | HFE | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 1704297 | NM_001122764.3(PPOX):c.338G>C (p.Arg113Thr) | PPOX | Pathogenic | no assertion criteria provided |
| 189241 | NM_001122764.3(PPOX):c.199del (p.Ala66_Leu67insTer) | PPOX | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 664759 | NM_001122764.3(PPOX):c.745dup (p.Val249fs) | PPOX | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 8693 | NM_001122764.3(PPOX):c.694G>C (p.Gly232Arg) | PPOX | Pathogenic | criteria provided, single submitter |
| 8694 | NM_001122764.3(PPOX):c.502C>T (p.Arg168Cys) | PPOX | Pathogenic/Likely pathogenic | no assertion criteria provided |
| 8695 | NM_001122764.3(PPOX):c.59A>C (p.His20Pro) | PPOX | Pathogenic | no assertion criteria provided |
| 8696 | NM_001122764.3(PPOX):c.175C>T (p.Arg59Trp) | PPOX | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 8697 | NM_001122764.3(PPOX):c.503G>A (p.Arg168His) | PPOX | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 8699 | NM_001122764.3(PPOX):c.538_539del (p.Ile180fs) | PPOX | Pathogenic | no assertion criteria provided |
| 8700 | NM_001122764.3(PPOX):c.1241_1245del (p.Leu414fs) | PPOX | Pathogenic | no assertion criteria provided |
| 8702 | PPOX, IVS11DS, G-A, -1 | PPOX | Pathogenic | no assertion criteria provided |
| 8703 | NM_001122764.3(PPOX):c.35T>C (p.Ile12Thr) | PPOX | Pathogenic | no assertion criteria provided |
| 3067865 | NM_001122764.3(PPOX):c.87+1G>A | PPOX | Likely pathogenic | criteria provided, single submitter |
| 3362804 | NM_001122764.3(PPOX):c.313dup (p.Leu105fs) | PPOX | Likely pathogenic | criteria provided, single submitter |
| 3775017 | NM_001122764.3(PPOX):c.1123C>T (p.Gln375Ter) | PPOX | Likely pathogenic | criteria provided, single submitter |
| 4535974 | NM_001122764.3(PPOX):c.917T>C (p.Leu306Pro) | PPOX | Likely pathogenic | criteria provided, single submitter |
| 4846908 | NM_001122764.3(PPOX):c.362_363del (p.Pro121fs) | PPOX | Likely pathogenic | criteria provided, single submitter |
| 623210 | NM_001122764.3(PPOX):c.869-3_869-2del | PPOX | Likely pathogenic | criteria provided, single submitter |
| 976468 | NM_001122764.3(PPOX):c.1291+1G>T | PPOX | Likely pathogenic | no assertion criteria provided |
| 1284646 | NM_005689.4(ABCB6):c.1762G>A (p.Gly588Ser) | ABCB6 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 68473 | NM_005689.4(ABCB6):c.575G>A (p.Arg192Gln) | ABCB6 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 10 | NM_000410.4(HFE):c.187C>G (p.His63Asp) | HFE | Conflicting classifications of pathogenicity; other | criteria provided, conflicting classifications |
| 11 | NM_000410.4(HFE):c.193A>T (p.Ser65Cys) | HFE | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 9 | NM_000410.4(HFE):c.845G>A (p.Cys282Tyr) | HFE | Conflicting classifications of pathogenicity; other; risk factor | criteria provided, conflicting classifications |
| 1668855 | NM_001122764.3(PPOX):c.1296A>G (p.Ser432=) | PPOX | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 293239 | NM_001122764.3(PPOX):c.-246G>T | PPOX | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 7 · Orphanet: 15 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
GenCC gene–disease validity (cohort genes)
the Disease column is the GenCC-asserted condition — a cohort gene’s strongest validity may be for a related predisposition syndrome.
| Gene | Classification | Inheritance | Disease | Records |
|---|---|---|---|---|
| PPOX | Definitive | Semidominant | variegate porphyria | 7 |
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|---|---|
| PPOX | Orphanet:79473 | Variegate porphyria |
| ABCB6 | Orphanet:241 | Dyschromatosis universalis hereditaria |
| ABCB6 | Orphanet:90044 | Familial pseudohyperkalemia |
| ABCB6 | Orphanet:98938 | Colobomatous microphthalmia |
| ABCB6 | Orphanet:98942 | Coloboma of choroid and retina |
| ABCB6 | Orphanet:98943 | Coloboma of eye lens |
| ABCB6 | Orphanet:98944 | Coloboma of iris |
| ABCB6 | Orphanet:98945 | Coloboma of macula |
| ABCB6 | Orphanet:98946 | Coloboma of eyelid |
| ABCB6 | Orphanet:98947 | Coloboma of optic disc |
| HFE | Orphanet:443057 | Sporadic porphyria cutanea tarda |
| HFE | Orphanet:443062 | Familial porphyria cutanea tarda |
| HFE | Orphanet:465508 | Symptomatic form of HFE-related hemochromatosis |
| HFE | Orphanet:586 | Cystic fibrosis |
| HFE | Orphanet:648581 | Digenic hemochromatosis |
Cohort genes → proteins
5 cohort genes, 4 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|---|
| multi_evidence | 5 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|---|---|---|---|---|
| PPOX | HGNC:9280 | ENSG00000143224 | P50336 | Protoporphyrinogen oxidase | gencc,clinvar |
| ABCB6 | HGNC:47 | ENSG00000115657 | Q9NP58 | ATP-binding cassette sub-family B member 6 | clinvar |
| HFE | HGNC:4886 | ENSG00000010704 | Q30201 | Hereditary hemochromatosis protein | clinvar |
| HFE-AS1 | HGNC:55168 | HFE antisense RNA 1 | clinvar | ||
| B4GALT3 | HGNC:926 | ENSG00000158850 | O60512 | Beta-1,4-galactosyltransferase 3 | clinvar |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|---|---|
| PPOX | Protoporphyrinogen oxidase | Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. |
| ABCB6 | ATP-binding cassette sub-family B member 6 | ATP-dependent transporter that catalyzes the transport of a broad-spectrum of porphyrins from the cytoplasm to the extracellular space through the plasma membrane or into the vesicle lumen. |
| HFE | Hereditary hemochromatosis protein | Binds to transferrin receptor (TFR) and reduces its affinity for iron-loaded transferrin. |
| B4GALT3 | Beta-1,4-galactosyltransferase 3 | Responsible for the synthesis of complex-type N-linked oligosaccharides in many glycoproteins as well as the carbohydrate moieties of glycolipids. |
Protein-family classification
Druggable: 3 · Difficult: 0 · Unknown: 2 · Druggable fraction: 0.6
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|---|---|---|
| Transporter | 1 | 15.6× | 0.251 |
| Antibody/Immunoglobulin | 1 | 5.8× | 0.320 |
| Enzyme (other) | 1 | 2.4× | 0.471 |
| Other/Unknown | 2 | 0.7× | 0.877 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|---|---|---|---|
| PPOX | Enzyme (other) | yes | 1.3.3.4 | Amino_oxidase, Protoporphyrinogen_oxidase, FAD/NAD-bd_sf |
| ABCB6 | Transporter | yes | ABC_transporter-like_ATP-bd, AAA+_ATPase, ABC1_TM_dom | |
| HFE | Antibody/Immunoglobulin | yes | MHC_I_a_a1/a2, Ig/MHC_CS, Ig_C1-set | |
| HFE-AS1 | Other/Unknown | no | ||
| B4GALT3 | Other/Unknown | no | Galactosyl_T, Galactosyl_T_C, Galactosyl_T_N |
Expression context
Cohort genes with no expression data: 1.
4 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 0 |
| broad (>20) | 4 |
| unknown | 1 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|---|
| epithelium of bronchus | 1 |
| olfactory segment of nasal mucosa | 1 |
| right uterine tube | 1 |
| left ovary | 1 |
| right hemisphere of cerebellum | 1 |
| right ovary | 1 |
| olfactory bulb | 1 |
| stromal cell of endometrium | 1 |
| type B pancreatic cell | 1 |
| granulocyte | 1 |
| oocyte | 1 |
| secondary oocyte | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|---|---|---|---|
| PPOX | 264 | ubiquitous | marker | right uterine tube, olfactory segment of nasal mucosa, epithelium of bronchus |
| ABCB6 | 140 | ubiquitous | marker | right ovary, right hemisphere of cerebellum, left ovary |
| HFE | 238 | ubiquitous | marker | type B pancreatic cell, olfactory bulb, stromal cell of endometrium |
| HFE-AS1 | ||||
| B4GALT3 | 284 | ubiquitous | marker | oocyte, granulocyte, secondary oocyte |
Protein interactions among cohort
Intra-cohort edges: 1.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|---|
| HFE | 1,569 |
| PPOX | 1,525 |
| ABCB6 | 1,480 |
| B4GALT3 | 1,085 |
| HFE-AS1 | 0 |
Intra-cohort edges
| A | B | Sources |
|---|---|---|
| ABCB6 | PPOX | string_interaction |
Structural data
PDB: 3 · AlphaFold-only: 1 · No structure: 1
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|---|---|
| ABCB6 | Q9NP58 | 16 |
| PPOX | P50336 | 3 |
| HFE | Q30201 | 2 |
AlphaFold-only cohort genes (top 30 by pLDDT)
| Symbol | UniProt | pLDDT |
|---|---|---|
| B4GALT3 | O60512 | 88.72 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 20. Enrichment computed across 5 evidence-associated genes (4 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 4 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| Defective ABCB6 causes MCOPCB7 | 1 | 2855.0× | 0.007 | ABCB6 |
| Mitochondrial ABC transporters | 1 | 713.8× | 0.014 | ABCB6 |
| Heme biosynthesis | 1 | 190.3× | 0.024 | PPOX |
| N-Glycan antennae elongation | 1 | 190.3× | 0.024 | B4GALT3 |
| N-glycan antennae elongation in the medial/trans-Golgi | 1 | 142.8× | 0.024 | B4GALT3 |
| Keratan sulfate/keratin metabolism | 1 | 124.1× | 0.024 | B4GALT3 |
| ABC transporter disorders | 1 | 109.8× | 0.024 | ABCB6 |
| Keratan sulfate biosynthesis | 1 | 95.2× | 0.024 | B4GALT3 |
| Transferrin endocytosis and recycling | 1 | 92.1× | 0.024 | HFE |
| Glycosaminoglycan metabolism | 1 | 54.9× | 0.036 | B4GALT3 |
| Disorders of transmembrane transporters | 1 | 34.8× | 0.051 | ABCB6 |
| ABC-family protein mediated transport | 1 | 30.4× | 0.051 | ABCB6 |
| Metabolism of carbohydrates and carbohydrate derivatives | 1 | 30.1× | 0.051 | B4GALT3 |
| Transport to the Golgi and subsequent modification | 1 | 25.7× | 0.055 | B4GALT3 |
| Asparagine N-linked glycosylation | 1 | 15.0× | 0.087 | B4GALT3 |
| Transport of small molecules | 1 | 6.3× | 0.187 | ABCB6 |
| Post-translational protein modification | 1 | 4.8× | 0.227 | B4GALT3 |
| Disease | 1 | 3.3× | 0.301 | ABCB6 |
| Metabolism of proteins | 1 | 3.1× | 0.301 | B4GALT3 |
| Metabolism | 1 | 2.9× | 0.302 | B4GALT3 |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 4 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| porphyrin-containing compound biosynthetic process | 2 | 2106.5× | 1e-05 | PPOX, ABCB6 |
| intracellular iron ion homeostasis | 2 | 122.1× | 0.002 | ABCB6, HFE |
| tetrapyrrole metabolic process | 1 | 4213.0× | 0.003 | ABCB6 |
| negative regulation of antigen processing and presentation of endogenous peptide antigen via MHC class I | 1 | 4213.0× | 0.003 | HFE |
| regulation of iron ion transport | 1 | 2106.5× | 0.003 | HFE |
| heme transmembrane transport | 1 | 2106.5× | 0.003 | ABCB6 |
| glucosylceramide metabolic process | 1 | 1404.3× | 0.003 | B4GALT3 |
| cellular detoxification of cadmium ion | 1 | 1404.3× | 0.003 | ABCB6 |
| response to iron ion starvation | 1 | 1404.3× | 0.003 | HFE |
| porphyrin-containing compound metabolic process | 1 | 1053.2× | 0.003 | ABCB6 |
| heme transport | 1 | 1053.2× | 0.003 | ABCB6 |
| negative regulation of CD8-positive, alpha-beta T cell activation | 1 | 1053.2× | 0.003 | HFE |
| galactosylceramide biosynthetic process | 1 | 842.6× | 0.004 | B4GALT3 |
| heme metabolic process | 1 | 842.6× | 0.004 | ABCB6 |
| negative regulation of T cell cytokine production | 1 | 601.9× | 0.005 | HFE |
| cellular response to iron ion | 1 | 601.9× | 0.005 | HFE |
| obsolete protoporphyrinogen IX biosynthetic process | 1 | 421.3× | 0.005 | PPOX |
| heme B biosynthetic process | 1 | 421.3× | 0.005 | PPOX |
| regulation of protein localization to cell surface | 1 | 421.3× | 0.005 | HFE |
| heme A biosynthetic process | 1 | 383.0× | 0.005 | PPOX |
| transferrin transport | 1 | 383.0× | 0.005 | HFE |
| urate metabolic process | 1 | 383.0× | 0.005 | HFE |
| positive regulation of peptide hormone secretion | 1 | 383.0× | 0.005 | HFE |
| hormone biosynthetic process | 1 | 351.1× | 0.005 | HFE |
| intracellular copper ion homeostasis | 1 | 234.1× | 0.007 | ABCB6 |
| response to iron ion | 1 | 234.1× | 0.007 | HFE |
| melanosome assembly | 1 | 221.7× | 0.007 | ABCB6 |
| negative regulation of ubiquitin-dependent protein catabolic process | 1 | 210.7× | 0.007 | HFE |
| positive regulation of receptor-mediated endocytosis | 1 | 200.6× | 0.008 | HFE |
| heme biosynthetic process | 1 | 150.5× | 0.010 | PPOX |
Therapeutics
Drugs indicated for this disease
No approved or late-stage (phase ≥3) drug is indicated for this disease; the following are in earlier-phase trials only.
Earlier-phase candidates (phase 2, investigational — efficacy not yet established): Afamelanotide, Hemin.
Drug target analysis
Approved (phase 4): 0 · Phase ≥3: 0 · Phased (≥1): 0 · Undrugged: 5
Druggability breadth: 2 of 5 evidence-associated genes (40%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|---|---|
| PPOX | 0 | 0 |
| ABCB6 | 0 | 0 |
| HFE | 0 | 0 |
| HFE-AS1 | 0 | 0 |
| B4GALT3 | 0 | 0 |
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 1.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|---|---|
| PPOX | 5 | Binding:5 |
| ABCB6 | 3 | Functional:3 |
Cohort enzymes (BRENDA EC)
| Symbol | EC numbers | Names |
|---|---|---|
| PPOX | 1.3.3.4 | protoporphyrinogen oxidase |
Pharmacogenomics
Cohort genes with a PharmGKB record: 4; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Chemical tractability of cohort targets
0 approved/phased compounds have measured bioactivity against a cohort gene (and aren’t yet in disease-level trials). This is a research / tractability signal, NOT a therapeutic recommendation — a bioactivity row often reflects off-target or screening binding (e.g. promiscuous kinase inhibitors against a cohort kinase), implying no disease mechanism.
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|---|---|---|
| A | Approved (phase 4 drug) | 0 | |
| B | Phased (≥1) drug, not yet approved | 0 | |
| C | Druggable family + PDB, no drug | 3 | PPOX, ABCB6, HFE |
| D | Druggable family + AlphaFold only, no drug | 0 | |
| E | Difficult family or no structure, no drug | 2 | HFE-AS1, B4GALT3 |
Undrugged target profiles
5 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
| Symbol | ChEMBL assays | Drugged partners (top 3) |
|---|---|---|
| PPOX | 5 | — |
| ABCB6 | 3 | — |
| HFE | 0 | — |
| HFE-AS1 | 0 | — |
| B4GALT3 | 0 | — |
Clinical trials & evidence
Clinical trials
Clinical trials: 6.
Phase distribution (across all retrieved trials)
| Phase | Trials |
|---|---|
| Not specified | 3 |
| PHASE2 | 2 |
| PHASE3 | 1 |
Top trials by phase / activity
| NCT | Phase | Status | Title |
|---|---|---|---|
| NCT03338816 | PHASE3 | COMPLETED | ENVISION: A Study to Evaluate the Efficacy and Safety of Givosiran (ALN-AS1) in Patients With Acute Hepatic Porphyrias (AHP) |
| NCT02922413 | PHASE2 | TERMINATED | Panhematin for Prevention of Acute Attacks of Porphyria |
| NCT05854784 | PHASE2 | COMPLETED | Study to Evaluate the Safety and Efficacy of Afamelanotide in Patients With Variegate Porphyria (VP) |
| NCT02935400 | Not specified | ACTIVE_NOT_RECRUITING | Acute Porphyria Biomarkers for Disease Activity |
| NCT01568554 | Not specified | COMPLETED | Clinical Diagnosis of Acute Porphyria |
| NCT03547297 | Not specified | TERMINATED | INSIGHT-AHP: A Study to Characterize the Prevalence of Acute Hepatic Porphyria (AHP) in Patients With Clinical Presentation and History Consistent With AHP |
Drugs tested across these trials (top 30)
| Molecule | Max phase | Trials referencing |
|---|---|---|
| AFAMELANOTIDE | 4 | 1 |
| HEMIN | 3 | 2 |
| GIVOSIRAN | 3 | 1 |
| CHEMBL4303664 | 0 | 2 |
| CHEMBL5308479 | 0 | 2 |
| HEMATIN | -1 | 2 |