von Willebrand disease type 2N

disease
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Also known as von Willebrand disease Normandy variantvon Willebrand disease, type 2N

Summary

von Willebrand disease type 2N (MONDO:0015631) is a disease with 1 cohort gene and 1 clinical trial.

At a glance

  • Prevalence: Unknown (Worldwide)
  • Cohort genes: 1
  • ClinVar variants: 11
  • Clinical trials: 1

Clinical features

No curated clinical features (Orphanet) for this disease.

Identifiers

Disease identifiers

FieldValue
Canonical namevon Willebrand disease type 2N
Mondo IDMONDO:0015631
Orphanet166093
ICD-111091176565
NCITC131689
SNOMED CT359732009
UMLSC1282975
MedGen266187
GARD0017024
Is cancer (heuristic)no

Also known as: von Willebrand disease Normandy variant · von Willebrand disease, type 2N

Data availability: 11 ClinVar variants · 10 ClinGen variant curations · 1 GenCC gene-disease record.

Disease family

Classification path: disease › human disease › disease by body system or component › hematologic disorderhemorrhagic diseasehereditary von Willebrand diseasevon Willebrand disease 2von Willebrand disease type 2N

Related subtypes (3): von Willebrand disease type 2A, von Willebrand disease type 2B, von Willebrand disease type 2M

Genetics & variants

GWAS landscape

No GWAS associations recorded — common-variant (GWAS) studies don’t cover this disease (typical for Mendelian / rare diseases). See the curated gene cohort and Mendelian overlap below.

Variant details and genetic-evidence tiers

ClinVar germline variants

11 retrieved; paginated sample, class counts are floors:

7 pathogenic, 3 likely pathogenic, 1 uncertain significance

ClinVarVariant (HGVS)GeneClassificationReview
100231NM_000552.5(VWF):c.2635G>A (p.Asp879Asn)VWFPathogenicreviewed by expert panel
294NM_000552.5(VWF):c.2372C>T (p.Thr791Met)VWFPathogenicreviewed by expert panel
295NM_000552.5(VWF):c.2446C>T (p.Arg816Trp)VWFPathogenicreviewed by expert panel
296NM_000552.5(VWF):c.2561G>A (p.Arg854Gln)VWFPathogenicreviewed by expert panel
312NM_000552.5(VWF):c.2384A>G (p.Tyr795Cys)VWFPathogenicreviewed by expert panel
316NM_000552.5(VWF):c.1071C>A (p.Tyr357Ter)VWFPathogenicno assertion criteria provided
317NM_000552.5(VWF):c.3178T>C (p.Cys1060Arg)VWFPathogenicreviewed by expert panel
100208NM_000552.5(VWF):c.2278C>T (p.Arg760Cys)VWFLikely pathogenicreviewed by expert panel
313NM_000552.5(VWF):c.2411G>T (p.Cys804Phe)VWFLikely pathogenicreviewed by expert panel
3390365NM_000552.5(VWF):c.2637C>A (p.Asp879Glu)VWFLikely pathogenicreviewed by expert panel
100220NM_000552.5(VWF):c.2435C>T (p.Pro812Leu)VWFUncertain significancereviewed by expert panel

Genes & proteins

Mendelian disease overlap and somatic drivers

GenCC: 13 · Orphanet: 6 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0

GenCC gene–disease validity (cohort genes)

the Disease column is the GenCC-asserted condition — a cohort gene’s strongest validity may be for a related predisposition syndrome.

GeneClassificationInheritanceDiseaseRecords
VWFDefinitiveAutosomal dominantvon Willebrand disease 213

Orphanet rare-disease linkage (cohort genes)

GeneOrphanet IDRare disease
VWFOrphanet:166078Von Willebrand disease type 1
VWFOrphanet:166084Von Willebrand disease type 2A
VWFOrphanet:166087Von Willebrand disease type 2B
VWFOrphanet:166090Von Willebrand disease type 2M
VWFOrphanet:166093Von Willebrand disease type 2N
VWFOrphanet:166096Von Willebrand disease type 3

Cohort genes → proteins

1 cohort genes, 1 distinct canonical proteins.

Evidence partition

SubsetGenes
multi_evidence1

Cohort genes (full)

SymbolHGNCEnsemblUniProtNameEvidence
VWFHGNC:12726ENSG00000110799P04275von Willebrand factorgencc,clinvar

Cohort function summary

Lead sentence per gene, UniProt-curated.

SymbolProtein nameFunction (lead sentence)
VWFvon Willebrand factorImportant in the maintenance of hemostasis, it promotes adhesion of platelets to the sites of vascular injury by forming a molecular bridge between sub-endothelial collagen matrix and platelet-surface receptor complex GPIb-IX-V.

Protein-family classification

Druggable: 0 · Difficult: 0 · Unknown: 1 · Druggable fraction: 0.0

Family distribution

Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.

FamilyGenesFoldFDR
Other/Unknown11.8×0.558

Per-gene assignment

SymbolFamilyDruggable?ECInterPro (top 3)
VWFOther/UnknownnoVWF_dom, VWF_type-D, VWF_A

Expression context

Cohort genes with no expression data: 0.

1 cohort gene are a single-cell marker in ≥1 SCXA experiment.

Breadth distribution (Bgee present_calls)

BucketGenes
narrow (1-5 tissues)0
moderate (6-20)0
broad (>20)1
unknown0

Top tissues across cohort

TissueCohort genes
apex of heart1
tendon of biceps brachii1
urethra1

Per-gene tissue summary (top 30)

SymbolBgee breadthFANTOM5 breadthSCXATop tissues
VWF289broadmarkerurethra, tendon of biceps brachii, apex of heart

Protein interactions among cohort

Intra-cohort edges: 0.

Hub genes (top 10 by interactor count)

SymbolInteractor count
VWF5,204

Structural data

PDB: 1 · AlphaFold-only: 0 · No structure: 0

Cohort genes with PDB structures (top 30)

SymbolUniProtPDB entries
VWFP0427548

Function

Pathway analysis

Distinct Reactome pathways touched by cohort: 25. Enrichment computed across 1 evidence-associated genes (1 with Reactome annotation).

Pathways by enrichment

Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 1 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.

PathwayCohort genesFoldFDRSample cohort genes
Defective F8 binding to von Willebrand factor15710.0×0.002VWF
Defective F8 cleavage by thrombin13806.7×0.002VWF
Defective VWF binding to collagen type I13806.7×0.002VWF
Enhanced cleavage of VWF variant by ADAMTS1312855.0×0.002VWF
Defective VWF cleavage by ADAMTS13 variant12855.0×0.002VWF
Enhanced binding of GP1BA variant to VWF multimer:collagen11631.4×0.002VWF
Defective binding of VWF variant to GPIb:IX:V11631.4×0.002VWF
GP1b-IX-V activation signalling1951.7×0.003VWF
p130Cas linkage to MAPK signaling for integrins1761.3×0.003VWF
GRB2:SOS provides linkage to MAPK signaling for Integrins1713.8×0.003VWF
Platelet Adhesion to exposed collagen1671.8×0.003VWF
Amplification and propagation of coagulation cascade1634.4×0.003VWF
Initiation of coagulation cascade1475.8×0.004VWF
Platelet Aggregation (Plug Formation)1439.2×0.004VWF
Integrin signaling1423.0×0.004VWF
Signaling by high-kinase activity BRAF mutants1317.2×0.005VWF
MAP2K and MAPK activation1285.5×0.005VWF
Signaling by RAF1 mutants1278.5×0.005VWF
Signaling by moderate kinase activity BRAF mutants1253.8×0.005VWF
Paradoxical activation of RAF signaling by kinase inactive BRAF1253.8×0.005VWF
Signaling downstream of RAS mutants1253.8×0.005VWF
Regulation of clotting cascade1233.1×0.005VWF
Signaling by BRAF and RAF1 fusions1170.4×0.006VWF
Integrin cell surface interactions1134.3×0.008VWF
Platelet degranulation187.8×0.011VWF

GO biological processes by enrichment

Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 1 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.

GO termCohort genesFoldFDRSample cohort genes
hemostasis11685.2×0.004VWF
cell-substrate adhesion1766.0×0.004VWF
positive regulation of intracellular signal transduction1648.1×0.004VWF
platelet activation1267.5×0.006VWF
response to wounding1221.7×0.006VWF
blood coagulation1173.7×0.007VWF
cell adhesion137.5×0.027VWF

Therapeutics

Drug target analysis

Approved (phase 4): 0 · Phase ≥3: 0 · Phased (≥1): 0 · Undrugged: 1

Druggability breadth: 1 of 1 evidence-associated genes (100%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).

Top cohort targets by molecule count

SymbolMoleculesMax phase
VWF00

Bioactivity and enzyme data

Enzyme cohort genes (≥1 EC): 0.

Cohort genes with ChEMBL bioactivity (full, sorted by assay count)

SymbolAssaysType breakdown
VWF17Binding:17

Pharmacogenomics

Cohort genes with a PharmGKB record: 1; with CPIC/DPWG dosing guidelines: 0.

No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).

Chemical tractability of cohort targets

0 approved/phased compounds have measured bioactivity against a cohort gene (and aren’t yet in disease-level trials). This is a research / tractability signal, NOT a therapeutic recommendation — a bioactivity row often reflects off-target or screening binding (e.g. promiscuous kinase inhibitors against a cohort kinase), implying no disease mechanism.

Druggability pyramid

Cohort genes binned by druggability tier (high → low):

TierDefinitionGenesSymbols
AApproved (phase 4 drug)0
BPhased (≥1) drug, not yet approved0
CDruggable family + PDB, no drug0
DDruggable family + AlphaFold only, no drug0
EDifficult family or no structure, no drug1VWF

Undrugged target profiles

1 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).

SymbolChEMBL assaysDrugged partners (top 3)
VWF17

Clinical trials & evidence

Clinical trials

Clinical trials: 1.

Phase distribution (across all retrieved trials)

PhaseTrials
Not specified1

Top trials by phase / activity

NCTPhaseStatusTitle
NCT06610201Not specifiedRECRUITINGA Study of Bleeding and Treatment in Participants With Von Willebrand Disease
  • Cohort genes: VWF