WAGR syndrome
diseaseOn this page
Also known as 11p deletion11p deletion syndrome11p monosomy11p partial monosomy syndromeAGR triadchromosome 11p deletionchromosome 11p deletion syndromechromosome 11p13 deletion syndromeDel(11)(p13)deletion 11pdeletion 11p13monosomy 11pmonosomy 11p13partial monosomy 11pWAGRWAGR 11p13 deletion syndromeWAGR ComplexWAGR Syndrome/11p Deletion SyndromeWilms tumor, aniridia, genitourinary anomalies and developmental delay syndrome
Summary
WAGR syndrome (MONDO:0008681) is a disease with 5 cohort genes and 3 clinical trials. Top therapeutic interventions include lufenuron.
At a glance
- Prevalence: Unknown (Worldwide) [Orphanet-validated]
- Cohort genes: 5
- ClinVar variants: 1,475
- Phenotypes (HPO): 18
- Clinical trials: 3
Clinical features
Epidemiology
Prevalence records
1 prevalence record(s), Orphanet:
| Type | Class | Value | Geography | Validation |
|---|---|---|---|---|
| Prevalence at birth | 1-9 / 1 000 000 | 0.2 | Worldwide | Validated |
Signs & symptoms
Clinical features (HPO)
18 HPO clinical features (Orphanet curated; top 18 by frequency):
| HPO ID | Term | Frequency |
|---|---|---|
| HP:0008053 | Aplasia/Hypoplasia of the iris | Very frequent (80-99%) |
| HP:0000028 | Cryptorchidism | Frequent (30-79%) |
| HP:0000232 | Everted lower lip vermilion | Frequent (30-79%) |
| HP:0000252 | Microcephaly | Frequent (30-79%) |
| HP:0000347 | Micrognathia | Frequent (30-79%) |
| HP:0000364 | Hearing abnormality | Frequent (30-79%) |
| HP:0000505 | Visual impairment | Frequent (30-79%) |
| HP:0000508 | Ptosis | Frequent (30-79%) |
| HP:0000518 | Cataract | Frequent (30-79%) |
| HP:0000639 | Nystagmus | Frequent (30-79%) |
| HP:0001249 | Intellectual disability | Frequent (30-79%) |
| HP:0004322 | Short stature | Frequent (30-79%) |
| HP:0100627 | Displacement of the urethral meatus | Frequent (30-79%) |
| HP:0000062 | Ambiguous genitalia | Occasional (5-29%) |
| HP:0000501 | Glaucoma | Occasional (5-29%) |
| HP:0001513 | Obesity | Occasional (5-29%) |
| HP:0002650 | Scoliosis | Occasional (5-29%) |
| HP:0007299 | Dysfunction of lateral corticospinal tracts | Occasional (5-29%) |
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | WAGR syndrome |
| Mondo ID | MONDO:0008681 |
| MeSH | D017624 |
| OMIM | 194072 |
| Orphanet | 893 |
| DOID | DOID:14515 |
| ICD-11 | 1858307812 |
| NCIT | C3718 |
| SNOMED CT | 715215007 |
| UMLS | C0206115 |
| MedGen | 64512 |
| GARD | 0005528 |
| NORD | 1833 |
| Is cancer (heuristic) | no |
Also known as: 11p deletion · 11p deletion syndrome · 11p monosomy · 11p partial monosomy syndrome · AGR triad · chromosome 11p deletion · chromosome 11p deletion syndrome · chromosome 11p13 deletion syndrome · Del(11)(p13) · deletion 11p · deletion 11p13 · monosomy 11p · monosomy 11p13 · partial monosomy 11p · WAGR · WAGR 11p13 deletion syndrome · WAGR Complex · WAGR syndrome · WAGR Syndrome/11p Deletion Syndrome · Wilms tumor, aniridia, genitourinary anomalies and developmental delay syndrome (+9 more)
Data availability: 1,475 ClinVar variants · 14 cell lines.
Disease family
An umbrella term covering 1 Mondo subtype.
Classification path: disease › human disease › disease by etiologic mechanism › disease of genetic or genomic mechanism › hereditary disease › hereditary neoplastic syndrome › WAGR syndrome
Related subtypes (116): mosaic variegated aneuploidy syndrome, tuberous sclerosis, hereditary breast ovarian cancer syndrome, hereditary multiple osteochondromas, nevoid basal cell carcinoma syndrome, leukemia, chronic lymphocytic, susceptibility to, 2, blue rubber bleb nevus, cherubism, Beckwith-Wiedemann syndrome, multiple self-healing squamous epithelioma, erythroleukemia, familial, susceptibility to, goiter, multinodular 1, with or without Sertoli-Leydig cell tumors, hyperparathyroidism 2 with jaw tumors, Kaposi sarcoma, susceptibility to, hereditary leiomyomatosis and renal cell cancer, susceptibility to uveal melanoma, melanoma and neural system tumor syndrome, nasopharyngeal carcinoma, susceptibility to, 2, neuroblastoma, susceptibility to, 1, Rothmund-Thomson syndrome, mismatch repair cancer syndrome 1, Wiskott-Aldrich syndrome, N syndrome, hereditary thrombocytopenia and hematologic cancer predisposition syndrome, prostate cancer/brain cancer susceptibility, Brooke-Spiegler syndrome, pancreatic cancer, susceptibility to, 1, Carney-Stratakis syndrome, nasopharyngeal carcinoma, susceptibility to, 1, ovarian cancer, susceptibility to, 1, colorectal cancer, susceptibility to, 1, lung cancer susceptibility 1, leukemia, chronic lymphocytic, susceptibility to, 1, Kostmann syndrome, colorectal cancer, susceptibility to, 2, colorectal cancer, susceptibility to, 3, colorectal cancer, susceptibility to, 5, colorectal cancer, susceptibility to, 6, colorectal cancer, susceptibility to, 7, leukemia, chronic lymphocytic, susceptibility to, 3, leukemia, chronic lymphocytic, susceptibility to, 4, leukemia, chronic lymphocytic, susceptibility to, 5, lung cancer susceptibility 3, colorectal cancer, susceptibility to, 8, colorectal cancer, susceptibility to, 9, colorectal cancer, susceptibility to, 10, colorectal cancer, susceptibility to, 11, lung cancer susceptibility 4, neuroblastoma, susceptibility to, 3, neuroblastoma, susceptibility to, 4, neuroblastoma, susceptibility to, 5, neuroblastoma, susceptibility to, 6, leukemia, acute lymphocytic, susceptibility to, 1, leukemia, acute lymphocytic, susceptibility to, 2, lung cancer susceptibility 5, BAP1-related tumor predisposition syndrome, familial cutaneous telangiectasia and oropharyngeal predisposition cancer syndrome, Maffucci syndrome, basal cell carcinoma, susceptibility to, 7, colorectal cancer, susceptibility to, 12, leukemia, acute lymphoblastic, susceptibility to, 3, cholangiocarcinoma, susceptibility to, progeroid features-hepatocellular carcinoma predisposition syndrome, neuroblastoma, susceptibility to, 7, DDX41-related hematologic malignancy predisposition syndrome, nasopharyngeal carcinoma, susceptibility to, 3, familial isolated hyperparathyroidism, intestinal polyposis syndrome, dyskeratosis congenita, familial rhabdoid tumor, multiple endocrine neoplasia, hereditary pheochromocytoma-paraganglioma, PTEN hamartoma tumor syndrome, familial multiple fibrofolliculoma, hereditary retinoblastoma, familial atypical multiple mole melanoma syndrome, hereditary nonpolyposis colon cancer, Li-Fraumeni syndrome, Cobb syndrome, neurofibromatosis, susceptibility to familial cutaneous melanoma, pancreatic cancer, susceptibility to, 5, leukemia, acute myeloid, susceptibility to, diffuse gastric and lobular breast cancer syndrome with or without cleft lip and/or palate, glioma susceptibility, hemangioma, capillary infantile, susceptibility to, CDH1-related diffuse gastric and lobular breast cancer syndrome, NTHL1-deficiency tumor predisposition syndrome, SAMD9-related spectrum and myeloid neoplasm risk, neuroblastoma, susceptibility to, 2, BARD1-related cancer predisposition, BRCA1-related cancer predisposition, BRCA2-related cancer predisposition, ATM-related cancer predisposition, CHEK2-related cancer predisposition, PALB2-related cancer predisposition, RAD51C-related cancer predisposition, RAD51D-related cancer predisposition, Li-fraumeni-like syndrome, breast cancer, familial, susceptibility to, 1, breast cancer, familial, susceptibility to, 2, breast cancer, familial, susceptibility to, 3, colorectal cancer, susceptibility to, 4, colorectal cancer, susceptibility to, on chromosome 15, ovarian cancer, familial, susceptibility to, 1, ovarian cancer, familial, susceptibility to, 2, ovarian cancer, familial, susceptibility to, 3, inherited hematologic cancer-predisposing syndrome, mosaic neurofibromatosis/schwannomatosis, tumor predisposition syndrome 2, prostate cancer, hereditary, X-linked 3, follicular lymphoma, susceptibility to, GPR161-related medulloblastoma predisposition, SAMD9L-related spectrum and myeloid neoplasm risk, HAVCR2-related cancer predisposition, EGLN1-related erythrocytosis and pheochromocytoma/paraganglioma predisposition
Subtypes (1): Wilms tumor, aniridia, genitourinary anomalies, intellectual disability, and obesity syndrome
Genetics & variants
GWAS landscape
No GWAS associations recorded — common-variant (GWAS) studies don’t cover this disease (typical for Mendelian / rare diseases). See the curated gene cohort and Mendelian overlap below.
Variant details and genetic-evidence tiers
ClinVar germline variants
600 retrieved; paginated sample, class counts are floors:
279 uncertain significance, 262 likely benign, 31 conflicting classifications of pathogenicity, 16 pathogenic, 5 benign, 4 benign/likely benign, 2 likely pathogenic, 1 pathogenic/likely pathogenic
| ClinVar | Variant (HGVS) | Gene | Classification | Review |
|---|---|---|---|---|
| 1075590 | NM_024426.6(WT1):c.455del (p.Gly152fs) | LOC107982234 | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 1453898 | NM_024426.6(WT1):c.276del (p.Gly93fs) | LOC107982234 | Pathogenic | criteria provided, single submitter |
| 1456851 | NM_024426.6(WT1):c.314_318dup (p.Trp107fs) | LOC107982234 | Pathogenic | criteria provided, single submitter |
| 2036794 | NM_024426.6(WT1):c.453G>A (p.Trp151Ter) | LOC107982234 | Pathogenic | criteria provided, single submitter |
| 2099254 | NM_024426.6(WT1):c.507_511delinsCACTGT (p.Ser170fs) | LOC107982234 | Pathogenic | criteria provided, single submitter |
| 2134883 | NM_024426.6(WT1):c.514C>T (p.Gln172Ter) | LOC107982234 | Pathogenic | criteria provided, single submitter |
| 1069921 | NC_000011.10:g.32396408del | WT1 | Pathogenic | criteria provided, single submitter |
| 1073615 | NC_000011.9:g.(?32456236)(32460464_?)del | WT1 | Pathogenic | criteria provided, single submitter |
| 1073616 | NC_000011.9:g.(?32421484)(32421600_?)del | WT1 | Pathogenic | criteria provided, single submitter |
| 1076730 | NM_024426.6(WT1):c.798C>G (p.Tyr266Ter) | WT1 | Pathogenic | criteria provided, single submitter |
| 1378543 | NM_024426.6(WT1):c.1121_1122insGGGG (p.Arg375fs) | WT1 | Pathogenic | criteria provided, single submitter |
| 1457778 | NM_024426.6(WT1):c.1240C>T (p.Gln414Ter) | WT1 | Pathogenic | criteria provided, single submitter |
| 1503278 | NM_024426.6(WT1):c.882_887+3del | WT1 | Pathogenic | criteria provided, single submitter |
| 2028955 | NM_024426.6(WT1):c.1077C>G (p.Tyr359Ter) | WT1 | Pathogenic | criteria provided, single submitter |
| 2033498 | NM_024426.6(WT1):c.1299T>A (p.Cys433Ter) | WT1 | Pathogenic | criteria provided, single submitter |
| 2100281 | NM_024426.6(WT1):c.913C>T (p.Gln305Ter) | WT1 | Pathogenic | criteria provided, single submitter |
| 2137049 | NM_024426.6(WT1):c.1372T>C (p.Cys458Arg) | WT1 | Pathogenic | criteria provided, single submitter |
| 1489927 | NM_024426.6(WT1):c.1016+2T>G | WT1 | Likely pathogenic | criteria provided, single submitter |
| 1518490 | NM_024426.6(WT1):c.1016+1G>A | WT1 | Likely pathogenic | criteria provided, single submitter |
| 1409524 | NM_024426.6(WT1):c.459C>T (p.Gly153=) | LOC107982234 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 1479531 | NM_024426.6(WT1):c.19C>A (p.Gln7Lys) | LOC107982234 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 1495132 | NM_024426.6(WT1):c.661+15G>T | LOC107982234 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 1534604 | NM_024426.6(WT1):c.66G>T (p.Thr22=) | LOC107982234 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 2093007 | NM_024426.6(WT1):c.161G>C (p.Ser54Thr) | LOC107982234 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 1008768 | NM_024426.6(WT1):c.1376A>G (p.Lys459Arg) | WT1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 1014150 | NM_024426.6(WT1):c.968T>C (p.Val323Ala) | WT1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 1018611 | NM_024426.6(WT1):c.996A>T (p.Lys332Asn) | WT1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 1019449 | NM_024426.6(WT1):c.677C>A (p.Thr226Asn) | WT1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 1055328 | NM_024426.6(WT1):c.76G>C (p.Gly26Arg) | WT1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
| 1113403 | NM_024426.6(WT1):c.978G>A (p.Gly326=) | WT1 | Conflicting classifications of pathogenicity | criteria provided, conflicting classifications |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 0 · Orphanet: 23 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|---|---|
| WT1 | Orphanet:220 | Denys-Drash syndrome |
| WT1 | Orphanet:242 | 46,XY complete gonadal dysgenesis |
| WT1 | Orphanet:251510 | 46,XY partial gonadal dysgenesis |
| WT1 | Orphanet:3097 | Meacham syndrome |
| WT1 | Orphanet:347 | Frasier syndrome |
| WT1 | Orphanet:654 | Nephroblastoma |
| WT1 | Orphanet:656 | Hereditary steroid-resistant nephrotic syndrome |
| WT1 | Orphanet:83469 | Desmoplastic small round cell tumor |
| WT1 | Orphanet:893 | WAGR syndrome |
| FSHB | Orphanet:52901 | Isolated follicle stimulating hormone deficiency |
| PAX6 | Orphanet:1065 | Aniridia-cerebellar ataxia-intellectual disability syndrome |
| PAX6 | Orphanet:2253 | Foveal hypoplasia-presenile cataract syndrome |
| PAX6 | Orphanet:2334 | Autosomal dominant keratitis |
| PAX6 | Orphanet:250923 | Isolated aniridia |
| PAX6 | Orphanet:35737 | Morning glory disc anomaly |
| PAX6 | Orphanet:708 | Peters anomaly |
| PAX6 | Orphanet:893 | WAGR syndrome |
| PAX6 | Orphanet:98942 | Coloboma of choroid and retina |
| PAX6 | Orphanet:98943 | Coloboma of eye lens |
| PAX6 | Orphanet:98944 | Coloboma of iris |
| PAX6 | Orphanet:98945 | Coloboma of macula |
| PAX6 | Orphanet:98946 | Coloboma of eyelid |
| PAX6 | Orphanet:98947 | Coloboma of optic disc |
Cohort genes → proteins
5 cohort genes, 5 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|---|
| multi_evidence | 5 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|---|---|---|---|---|
| ELP4 | HGNC:1171 | ENSG00000109911 | Q96EB1 | Elongator complex protein 4 | clinvar |
| WT1 | HGNC:12796 | ENSG00000184937 | P19544 | Wilms tumor protein | clinvar |
| WT1-AS | HGNC:18135 | ENSG00000183242 | Q06250 | Putative Wilms tumor upstream neighbor 1 gene protein | clinvar |
| FSHB | HGNC:3964 | ENSG00000131808 | P01225 | Follitropin subunit beta | clinvar |
| PAX6 | HGNC:8620 | ENSG00000007372 | P26367 | Paired box protein Pax-6 | clinvar |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|---|---|
| ELP4 | Elongator complex protein 4 | Component of the elongator complex which is required for multiple tRNA modifications, including mcm5U (5-methoxycarbonylmethyl uridine), mcm5s2U (5-methoxycarbonylmethyl-2-thiouridine), and ncm5U (5-carbamoylmethyl uridine). |
| WT1 | Wilms tumor protein | Transcription factor that plays an important role in cellular development and cell survival. |
| FSHB | Follitropin subunit beta | Together with the alpha chain CGA constitutes follitropin, the follicle-stimulating hormone, and provides its biological specificity to the hormone heterodimer. |
| PAX6 | Paired box protein Pax-6 | Transcription factor with important functions in the development of the eye, nose, central nervous system and pancreas. |
Protein-family classification
Druggable: 0 · Difficult: 2 · Unknown: 3 · Druggable fraction: 0.0
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|---|---|---|
| Transcription factor | 2 | 3.3× | 0.229 |
| Other/Unknown | 3 | 1.1× | 0.608 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|---|---|---|---|
| ELP4 | Other/Unknown | no | Elongator_complex_protein_4, P-loop_NTPase | |
| WT1 | Transcription factor | no | Wilms_tumour_N, Znf_C2H2_type, Znf_C2H2_sf | |
| WT1-AS | Other/Unknown | no | ||
| FSHB | Other/Unknown | no | Gonadotropin_bsu, Glyco_hormone_CN, Gonadotropin_bsu_CS | |
| PAX6 | Transcription factor | no | HD, Paired_dom, Homeodomain-like_sf |
Expression context
Cohort genes with no expression data: 0.
3 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 0 |
| broad (>20) | 5 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|---|
| ventricular zone | 2 |
| calcaneal tendon | 1 |
| primordial germ cell in gonad | 1 |
| germinal epithelium of ovary | 1 |
| metanephric glomerulus | 1 |
| renal glomerulus | 1 |
| left ovary | 1 |
| ovary | 1 |
| right uterine tube | 1 |
| adenohypophysis | 1 |
| male germ line stem cell (sensu Vertebrata) in testis | 1 |
| pituitary gland | 1 |
| palpebral conjunctiva | 1 |
| type B pancreatic cell | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|---|---|---|---|
| ELP4 | 250 | ubiquitous | marker | ventricular zone, calcaneal tendon, primordial germ cell in gonad |
| WT1 | 168 | broad | marker | germinal epithelium of ovary, renal glomerulus, metanephric glomerulus |
| WT1-AS | 106 | tissue_specific | yes | right uterine tube, left ovary, ovary |
| FSHB | 52 | tissue_specific | yes | adenohypophysis, pituitary gland, male germ line stem cell (sensu Vertebrata) in testis |
| PAX6 | 201 | broad | marker | palpebral conjunctiva, type B pancreatic cell, ventricular zone |
Protein interactions among cohort
Intra-cohort edges: 1.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|---|
| PAX6 | 4,971 |
| WT1 | 3,938 |
| ELP4 | 1,740 |
| FSHB | 1,333 |
| WT1-AS | 35 |
Intra-cohort edges
| A | B | Sources |
|---|---|---|
| ELP4 | PAX6 | string_interaction |
Structural data
PDB: 3 · AlphaFold-only: 2 · No structure: 0
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|---|---|
| WT1 | P19544 | 28 |
| FSHB | P01225 | 6 |
| PAX6 | P26367 | 2 |
AlphaFold-only cohort genes (top 30 by pLDDT)
| Symbol | UniProt | pLDDT |
|---|---|---|
| ELP4 | Q96EB1 | 74.49 |
| WT1-AS | Q06250 | 61.60 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 12. Enrichment computed across 5 evidence-associated genes (4 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 4 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| Formation of the anterior neural plate | 1 | 259.6× | 0.011 | PAX6 |
| Glycoprotein hormones | 1 | 237.9× | 0.011 | FSHB |
| Hormone ligand-binding receptors | 1 | 237.9× | 0.011 | FSHB |
| Synthesis, secretion, and inactivation of Glucose-dependent Insulinotropic Polypeptide (GIP) | 1 | 219.6× | 0.011 | PAX6 |
| Nephron development | 1 | 219.6× | 0.011 | WT1 |
| Transcriptional regulation of testis differentiation | 1 | 178.4× | 0.011 | WT1 |
| Regulation of gene expression in beta cells | 1 | 129.8× | 0.012 | PAX6 |
| Synthesis, secretion, and inactivation of Glucagon-like Peptide-1 (GLP-1) | 1 | 129.8× | 0.012 | PAX6 |
| Negative Regulation of CDH1 Gene Transcription | 1 | 30.1× | 0.044 | WT1 |
| Activation of anterior HOX genes in hindbrain development during early embryogenesis | 1 | 22.8× | 0.052 | PAX6 |
| HATs acetylate histones | 1 | 19.8× | 0.054 | ELP4 |
| G alpha (s) signalling events | 1 | 18.3× | 0.054 | FSHB |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 4 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| pancreatic A cell development | 1 | 4213.0× | 0.004 | PAX6 |
| oligodendrocyte cell fate specification | 1 | 4213.0× | 0.004 | PAX6 |
| forebrain-midbrain boundary formation | 1 | 4213.0× | 0.004 | PAX6 |
| somatic motor neuron fate commitment | 1 | 4213.0× | 0.004 | PAX6 |
| negative regulation of metanephric glomerular mesangial cell proliferation | 1 | 4213.0× | 0.004 | WT1 |
| positive regulation of miRNA transcription | 2 | 145.3× | 0.004 | WT1, PAX6 |
| positive regulation of gene expression | 3 | 29.1× | 0.004 | WT1, FSHB, PAX6 |
| regulation of animal organ formation | 1 | 2106.5× | 0.004 | WT1 |
| positive regulation of steroid biosynthetic process | 1 | 2106.5× | 0.004 | FSHB |
| adrenal cortex formation | 1 | 2106.5× | 0.004 | WT1 |
| visceral serous pericardium development | 1 | 2106.5× | 0.004 | WT1 |
| posterior mesonephric tubule development | 1 | 2106.5× | 0.004 | WT1 |
| positive regulation of metanephric ureteric bud development | 1 | 2106.5× | 0.004 | WT1 |
| habenula development | 1 | 1404.3× | 0.006 | PAX6 |
| follicle-stimulating hormone signaling pathway | 1 | 1404.3× | 0.006 | FSHB |
| regulation of asymmetric cell division | 1 | 1053.2× | 0.006 | PAX6 |
| regulation of timing of cell differentiation | 1 | 1053.2× | 0.006 | PAX6 |
| positive regulation of heart growth | 1 | 1053.2× | 0.006 | WT1 |
| metanephric S-shaped body morphogenesis | 1 | 1053.2× | 0.006 | WT1 |
| negative regulation of female gonad development | 1 | 1053.2× | 0.006 | WT1 |
| progesterone biosynthetic process | 1 | 842.6× | 0.006 | FSHB |
| thorax and anterior abdomen determination | 1 | 842.6× | 0.006 | WT1 |
| cardiac muscle cell fate commitment | 1 | 842.6× | 0.006 | WT1 |
| metanephric epithelium development | 1 | 842.6× | 0.006 | WT1 |
| positive regulation of transcription by RNA polymerase II | 3 | 11.2× | 0.006 | WT1, FSHB, PAX6 |
| ventral spinal cord interneuron specification | 1 | 702.2× | 0.006 | PAX6 |
| commitment of neuronal cell to specific neuron type in forebrain | 1 | 702.2× | 0.006 | PAX6 |
| Sertoli cell proliferation | 1 | 702.2× | 0.006 | FSHB |
| cellular response to gonadotropin stimulus | 1 | 702.2× | 0.006 | WT1 |
| salivary gland morphogenesis | 1 | 601.9× | 0.006 | PAX6 |
Therapeutics
Drug target analysis
Approved (phase 4): 0 · Phase ≥3: 0 · Phased (≥1): 0 · Undrugged: 5
Druggability breadth: 1 of 5 evidence-associated genes (20%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|---|---|
| ELP4 | 0 | 0 |
| WT1 | 0 | 0 |
| WT1-AS | 0 | 0 |
| FSHB | 0 | 0 |
| PAX6 | 0 | 0 |
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 0.
Pharmacogenomics
Cohort genes with a PharmGKB record: 5; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Chemical tractability of cohort targets
0 approved/phased compounds have measured bioactivity against a cohort gene (and aren’t yet in disease-level trials). This is a research / tractability signal, NOT a therapeutic recommendation — a bioactivity row often reflects off-target or screening binding (e.g. promiscuous kinase inhibitors against a cohort kinase), implying no disease mechanism.
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|---|---|---|
| A | Approved (phase 4 drug) | 0 | |
| B | Phased (≥1) drug, not yet approved | 0 | |
| C | Druggable family + PDB, no drug | 0 | |
| D | Druggable family + AlphaFold only, no drug | 0 | |
| E | Difficult family or no structure, no drug | 5 | ELP4, WT1, WT1-AS, FSHB, PAX6 |
Undrugged target profiles
5 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
| Symbol | ChEMBL assays | Drugged partners (top 3) |
|---|---|---|
| ELP4 | 0 | — |
| WT1 | 0 | — |
| WT1-AS | 0 | — |
| FSHB | 0 | — |
| PAX6 | 0 | — |
Clinical trials & evidence
Clinical trials
Clinical trials: 3.
Phase distribution (across all retrieved trials)
| Phase | Trials |
|---|---|
| Not specified | 3 |
Top trials by phase / activity
| NCT | Phase | Status | Title |
|---|---|---|---|
| NCT01793168 | Not specified | RECRUITING | Rare Disease Patient Registry & Natural History Study - Coordination of Rare Diseases at Sanford |
| NCT06740162 | Not specified | RECRUITING | Physical Activity and Community EmPOWERment Project |
| NCT00758108 | Not specified | COMPLETED | Characterization of WAGR Syndrome and Other Chromosome 11 Gene Deletions |
Drugs tested across these trials (top 30)
| Molecule | Max phase | Trials referencing |
|---|---|---|
| LUFENURON | 2 | 1 |