X-linked Emery-Dreifuss muscular dystrophy
diseaseOn this page
Also known as EmerinopathyEmery-Dreifuss muscular dystrophy, X-linkedmuscular dystrophy, tardive Emery-Dreifuss type, with contractures
Summary
X-linked Emery-Dreifuss muscular dystrophy (MONDO:0010680) is a disease caused by EMD (GenCC Definitive), with 7 cohort genes and 1 clinical trial.
At a glance
- Prevalence: 1-9 / 1 000 000 (United Kingdom) [Orphanet-validated]
- Causal gene: EMD (GenCC Definitive)
- Cohort genes: 7
- ClinVar variants: 570
- Phenotypes (HPO): 44
- Clinical trials: 1
Clinical features
Epidemiology
Prevalence records
3 prevalence record(s), Orphanet:
| Type | Class | Value | Geography | Validation |
|---|---|---|---|---|
| Point prevalence | 1-9 / 1 000 000 | 0.13 | United Kingdom | Validated |
| Point prevalence | 1-9 / 100 000 | 1 | Worldwide | Not yet validated |
| Prevalence at birth | 1-9 / 100 000 | 1 | Worldwide | Not yet validated |
Signs & symptoms
Clinical features (HPO)
44 HPO clinical features (Orphanet curated; top 44 by frequency):
| HPO ID | Term | Frequency |
|---|---|---|
| HP:0000767 | Pectus excavatum | Very frequent (80-99%) |
| HP:0001315 | Reduced tendon reflexes | Very frequent (80-99%) |
| HP:0001387 | Joint stiffness | Very frequent (80-99%) |
| HP:0002486 | Myotonia | Very frequent (80-99%) |
| HP:0003198 | Myopathy | Very frequent (80-99%) |
| HP:0003236 | Elevated circulating creatine kinase concentration | Very frequent (80-99%) |
| HP:0006785 | Limb-girdle muscular dystrophy | Very frequent (80-99%) |
| HP:0000470 | Short neck | Frequent (30-79%) |
| HP:0000912 | Sprengel anomaly | Frequent (30-79%) |
| HP:0001288 | Gait disturbance | Frequent (30-79%) |
| HP:0001639 | Hypertrophic cardiomyopathy | Frequent (30-79%) |
| HP:0002155 | Hypertriglyceridemia | Frequent (30-79%) |
| HP:0002515 | Waddling gait | Frequent (30-79%) |
| HP:0003141 | Increased LDL cholesterol concentration | Frequent (30-79%) |
| HP:0003306 | Spinal rigidity | Frequent (30-79%) |
| HP:0003418 | Back pain | Frequent (30-79%) |
| HP:0003458 | EMG: myopathic abnormalities | Frequent (30-79%) |
| HP:0003691 | Scapular winging | Frequent (30-79%) |
| HP:0003805 | Rimmed vacuoles | Frequent (30-79%) |
| HP:0004631 | Decreased cervical spine flexion due to contractures of posterior cervical muscles | Frequent (30-79%) |
| HP:0008948 | Proximal upper limb amyotrophy | Frequent (30-79%) |
| HP:0008956 | Proximal lower limb amyotrophy | Frequent (30-79%) |
| HP:0008994 | Proximal muscle weakness in lower limbs | Frequent (30-79%) |
| HP:0008997 | Proximal muscle weakness in upper limbs | Frequent (30-79%) |
| HP:0011807 | Type 1 muscle fiber atrophy | Frequent (30-79%) |
| HP:0030051 | Tip-toe gait | Frequent (30-79%) |
| HP:0030117 | Absent muscle fiber emerin | Frequent (30-79%) |
| HP:0000508 | Ptosis | Occasional (5-29%) |
| HP:0001252 | Hypotonia | Occasional (5-29%) |
| HP:0001513 | Obesity | Occasional (5-29%) |
| HP:0001678 | Atrioventricular block | Occasional (5-29%) |
| HP:0001771 | Achilles tendon contracture | Occasional (5-29%) |
| HP:0002650 | Scoliosis | Occasional (5-29%) |
| HP:0002808 | Kyphosis | Occasional (5-29%) |
| HP:0002987 | Elbow flexion contracture | Occasional (5-29%) |
| HP:0003307 | Hyperlordosis | Occasional (5-29%) |
| HP:0005115 | Supraventricular arrhythmia | Occasional (5-29%) |
| HP:0008064 | Ichthyosis | Occasional (5-29%) |
| HP:0009125 | Lipodystrophy | Occasional (5-29%) |
| HP:0001249 | Intellectual disability | Excluded (0%) |
| HP:0001605 | Vocal cord paralysis | Very rare (<1-4%) |
| HP:0001645 | Sudden cardiac death | Very rare (<1-4%) |
| HP:0002747 | Respiratory insufficiency due to muscle weakness | Very rare (<1-4%) |
| HP:0005155 | Ventricular escape rhythm | Very rare (<1-4%) |
Identifiers
Disease identifiers
| Field | Value |
|---|---|
| Canonical name | X-linked Emery-Dreifuss muscular dystrophy |
| Mondo ID | MONDO:0010680 |
| MeSH | D000083143 |
| Orphanet | 98863 |
| ICD-11 | 516501338 |
| UMLS | C0751337 |
| MedGen | 148284 |
| GARD | 0002102 |
| Is cancer (heuristic) | no |
Also known as: Emerinopathy · Emery-Dreifuss muscular dystrophy, X-linked · muscular dystrophy, tardive Emery-Dreifuss type, with contractures · X-linked Emery-Dreifuss muscular dystrophy
Data availability: 570 ClinVar variants · 4 GenCC gene-disease records · 7 cell lines.
Disease family
An umbrella term covering 3 Mondo subtypes.
Classification path: disease › human disease › disease by etiologic mechanism › disease of genetic or genomic mechanism › hereditary disease › X-linked disease › X-linked Emery-Dreifuss muscular dystrophy
Related subtypes (49): X-linked Opitz G/BBB syndrome, X-linked immunoneurologic disorder, X-linked adrenal hypoplasia congenita, X-linked lissencephaly with abnormal genitalia, X-linked severe congenital neutropenia, X-linked distal spinal muscular atrophy type 3, epilepsy, X-linked 1, with variable learning disabilities and behavior disorders, Aland island eye disease, X-linked erythropoietic protoporphyria, X-linked central congenital hypothyroidism with late-onset testicular enlargement, X-linked colobomatous microphthalmia-microcephaly-intellectual disability-short stature syndrome, X-linked acrogigantism due to Xq26 microduplication, Wiskott-Aldrich syndrome, X-linked Alport syndrome, X-linked mandibulofacial dysostosis, X-linked chondrodysplasia punctata, choroideremia, cone dystrophy, X-linked, with tapetal-like sheen, diabetes insipidus, nephrogenic, X-linked, Dyggve-Melchior-Clausen syndrome, X-linked, dyskeratosis congenita, X-linked, X-linked hypohidrotic ectodermal dysplasia, X-linked Ehlers-Danlos syndrome, epidermodysplasia verruciformis, X-linked, exudative vitreoretinopathy 2, X-linked, Aarskog-Scott syndrome, X-linked, hemophilia A, X-linked hydrocephalus with stenosis of the aqueduct of Sylvius, hyper-IgM syndrome type 1, X-linked lymphoproliferative syndrome, macular dystrophy, X-linked, X-linked myotubular myopathy, X-linked lethal multiple pterygium syndrome, X-linked retinoschisis, spondyloepiphyseal dysplasia tarda, X-linked, X-linked cerebellar ataxia, adrenoleukodystrophy, Charcot-Marie-Tooth disease type X, X-linked dominant disease, X-linked recessive disease, X-linked hypophosphatemic rickets, X-linked sideroblastic anemia 1, X-linked deafness, X-linked cone-rod dystrophy, X-linked congenital stationary night blindness, X-linked congenital hemolytic anemia, X-linked complex neurodevelopmental disorder, X-linked intellectual disability, leukemia, acute, X-linked
Subtypes (3): X-linked myopathy with postural muscle atrophy, Emery-Dreifuss muscular dystrophy 1, X-linked, Emery-Dreifuss muscular dystrophy 6, X-linked
Genetics & variants
GWAS landscape
No GWAS associations recorded — common-variant (GWAS) studies don’t cover this disease (typical for Mendelian / rare diseases). See the curated gene cohort and Mendelian overlap below.
Variant details and genetic-evidence tiers
ClinVar germline variants
570 retrieved; paginated sample, class counts are floors:
222 likely benign, 183 uncertain significance, 73 pathogenic, 53 conflicting classifications of pathogenicity, 13 benign/likely benign, 13 pathogenic/likely pathogenic, 8 benign, 5 likely pathogenic
| ClinVar | Variant (HGVS) | Gene | Classification | Review |
|---|---|---|---|---|
| 2422157 | NC_000023.10:g.(?152014869)(155171615_?)del | ABCD1 | Pathogenic | criteria provided, single submitter |
| 3243728 | NC_000023.10:g.(?152954030)(154005142_?)del | ABCD1 | Pathogenic | criteria provided, single submitter |
| 665050 | NC_000023.10:g.(?152990712)(153650075_?)del | ARHGAP4 | Pathogenic | criteria provided, single submitter |
| 1048786 | NM_000117.3(EMD):c.631del (p.Arg211fs) | EMD | Pathogenic | criteria provided, single submitter |
| 1048787 | NM_000117.3(EMD):c.449+1G>A | EMD | Pathogenic | criteria provided, single submitter |
| 1070850 | NC_000023.10:g.(?153607835)(153609567_?)del | EMD | Pathogenic | criteria provided, single submitter |
| 1071626 | NM_000117.3(EMD):c.483C>G (p.Tyr161Ter) | EMD | Pathogenic | criteria provided, single submitter |
| 1072810 | NM_000117.3(EMD):c.570dup (p.Met191fs) | EMD | Pathogenic | criteria provided, single submitter |
| 1074346 | NM_000117.3(EMD):c.643_653dup (p.Gln219fs) | EMD | Pathogenic | criteria provided, single submitter |
| 1074958 | NM_000117.3(EMD):c.2T>G (p.Met1Arg) | EMD | Pathogenic | criteria provided, single submitter |
| 1074959 | NM_000117.3(EMD):c.102C>G (p.Tyr34Ter) | EMD | Pathogenic | criteria provided, single submitter |
| 1074960 | NM_000117.3(EMD):c.153del (p.Ser52fs) | EMD | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 1075797 | NM_000117.3(EMD):c.650_654del (p.Leu217fs) | EMD | Pathogenic | criteria provided, single submitter |
| 11171 | NM_000117.3(EMD):c.506_507del (p.Pro169fs) | EMD | Pathogenic | criteria provided, single submitter |
| 11172 | NM_000117.3(EMD):c.1A>G (p.Met1Val) | EMD | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 11173 | NM_000117.3:c.55_83del | EMD | Pathogenic | no assertion criteria provided |
| 11174 | NM_000117.3(EMD):c.139_140dup (p.Leu48fs) | EMD | Pathogenic | no assertion criteria provided |
| 11176 | NM_000117.3(EMD):c.130C>T (p.Gln44Ter) | EMD | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 11177 | NM_000117.3(EMD):c.615del (p.Ile206fs) | EMD | Pathogenic | no assertion criteria provided |
| 11178 | NM_000117.3(EMD):c.548C>A (p.Pro183His) | EMD | Pathogenic | criteria provided, single submitter |
| 11179 | NM_000117.3(EMD):c.547C>A (p.Pro183Thr) | EMD | Pathogenic | no assertion criteria provided |
| 1184471 | NM_000117.3(EMD):c.125del (p.Glu42fs) | EMD | Pathogenic | no assertion criteria provided |
| 1330855 | NM_000117.3(EMD):c.187+1G>A | EMD | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 1374482 | NM_000117.3(EMD):c.266-3A>G | EMD | Pathogenic | criteria provided, single submitter |
| 1451449 | NM_000117.3(EMD):c.561_567dup (p.Phe190fs) | EMD | Pathogenic | criteria provided, single submitter |
| 1453367 | NM_000117.3(EMD):c.399+1G>T | EMD | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 1456997 | NM_000117.3(EMD):c.570del (p.Phe190fs) | EMD | Pathogenic | criteria provided, single submitter |
| 163403 | NM_000117.3(EMD):c.266-2A>G | EMD | Pathogenic | criteria provided, multiple submitters, no conflicts |
| 179133 | NM_000117.3(EMD):c.650_654dup (p.Gln219fs) | EMD | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
| 179496 | NM_000117.3(EMD):c.83-2A>G | EMD | Pathogenic/Likely pathogenic | criteria provided, multiple submitters, no conflicts |
Genes & proteins
Mendelian disease overlap and somatic drivers
GenCC: 13 · Orphanet: 20 · OMIM-shared: 0 · Dual-evidence (GWAS+Mendelian): 0
GenCC gene–disease validity (cohort genes)
the Disease column is the GenCC-asserted condition — a cohort gene’s strongest validity may be for a related predisposition syndrome.
| Gene | Classification | Inheritance | Disease | Records |
|---|---|---|---|---|
| EMD | Definitive | X-linked | X-linked Emery-Dreifuss muscular dystrophy | 5 |
| FHL1 | Definitive | X-linked | X-linked myopathy with postural muscle atrophy | 8 |
Orphanet rare-disease linkage (cohort genes)
| Gene | Orphanet ID | Rare disease |
|---|---|---|
| EMD | Orphanet:98863 | X-linked Emery-Dreifuss muscular dystrophy |
| FHL1 | Orphanet:178461 | X-linked myopathy with postural muscle atrophy |
| FHL1 | Orphanet:431272 | X-linked scapuloperoneal muscular dystrophy |
| FHL1 | Orphanet:97239 | Reducing body myopathy |
| FHL1 | Orphanet:98863 | X-linked Emery-Dreifuss muscular dystrophy |
| FLNA | Orphanet:1826 | Frontometaphyseal dysplasia |
| FLNA | Orphanet:2301 | Congenital short bowel syndrome |
| FLNA | Orphanet:2484 | Melnick-Needles syndrome |
| FLNA | Orphanet:482606 | X-linked keloid scarring-reduced joint mobility-increased optic cup-to-disc ratio syndrome |
| FLNA | Orphanet:555877 | FLNA-related X-linked myxomatous valvular dysplasia |
| FLNA | Orphanet:75497 | X-linked Ehlers-Danlos syndrome |
| FLNA | Orphanet:88630 | Terminal osseous dysplasia-pigmentary defects syndrome |
| FLNA | Orphanet:90650 | Otopalatodigital syndrome type 1 |
| FLNA | Orphanet:90652 | Otopalatodigital syndrome type 2 |
| FLNA | Orphanet:98892 | Periventricular nodular heterotopia |
| FLNA | Orphanet:99811 | Neuronal intestinal pseudoobstruction |
| ABCD1 | Orphanet:139396 | X-linked cerebral adrenoleukodystrophy |
| ABCD1 | Orphanet:139399 | Adrenomyeloneuropathy |
| ABCD1 | Orphanet:369942 | CADDS |
| ABCD1 | Orphanet:388 | Hirschsprung disease |
Cohort genes → proteins
7 cohort genes, 7 distinct canonical proteins.
Evidence partition
| Subset | Genes |
|---|---|
| multi_evidence | 7 |
Cohort genes (full)
| Symbol | HGNC | Ensembl | UniProt | Name | Evidence |
|---|---|---|---|---|---|
| EMD | HGNC:3331 | ENSG00000102119 | P50402 | Emerin | gencc,clinvar |
| FHL1 | HGNC:3702 | ENSG00000022267 | Q13642 | Four and a half LIM domains protein 1 | gencc |
| TEX28 | HGNC:2563 | ENSG00000278057 | O15482 | Testis-specific protein TEX28 | clinvar |
| DNASE1L1 | HGNC:2957 | ENSG00000013563 | P49184 | Deoxyribonuclease-1-like 1 | clinvar |
| FLNA | HGNC:3754 | ENSG00000196924 | P21333 | Filamin-A | clinvar |
| ABCD1 | HGNC:61 | ENSG00000101986 | P33897 | ATP-binding cassette sub-family D member 1 | clinvar |
| ARHGAP4 | HGNC:674 | ENSG00000089820 | P98171 | Rho GTPase-activating protein 4 | clinvar |
Cohort function summary
Lead sentence per gene, UniProt-curated.
| Symbol | Protein name | Function (lead sentence) |
|---|---|---|
| EMD | Emerin | Stabilizes and promotes the formation of a nuclear actin cortical network. |
| FHL1 | Four and a half LIM domains protein 1 | May have an involvement in muscle development or hypertrophy. |
| FLNA | Filamin-A | Promotes orthogonal branching of actin filaments and links actin filaments to membrane glycoproteins. |
| ABCD1 | ATP-binding cassette sub-family D member 1 | ATP-dependent transporter of the ATP-binding cassette (ABC) family involved in the transport of very long chain fatty acid (VLCFA)-CoA from the cytosol to the peroxisome lumen. |
| ARHGAP4 | Rho GTPase-activating protein 4 | Inhibitory effect on stress fiber organization. |
Protein-family classification
Druggable: 3 · Difficult: 2 · Unknown: 2 · Druggable fraction: 0.43
Family distribution
Cohort families vs a genome-wide background (hypergeometric, BH-FDR; fold = observed/expected). Counts kept; sorted by enrichment, so the catch-all Other/Unknown bucket no longer leads.
| Family | Genes | Fold | FDR |
|---|---|---|---|
| Phosphatase | 1 | 12.0× | 0.260 |
| Transporter | 1 | 11.1× | 0.260 |
| Antibody/Immunoglobulin | 1 | 4.2× | 0.433 |
| Scaffold/PPI | 1 | 2.5× | 0.512 |
| Transcription factor | 1 | 1.2× | 0.714 |
| Other/Unknown | 2 | 0.5× | 0.968 |
Per-gene assignment
| Symbol | Family | Druggable? | EC | InterPro (top 3) |
|---|---|---|---|---|
| EMD | Other/Unknown | no | LEM_dom, LEM/LEM-like_dom_sf, LEM_emerin | |
| FHL1 | Transcription factor | no | Znf_LIM, Fhl1, LIM_FHL1/2/3/5_N | |
| TEX28 | Other/Unknown | no | Testis-specific_TEX28, TEX28/TMCC | |
| DNASE1L1 | Phosphatase | yes | Endo/exonuclease/phosphatase, DNase_I, Deoxyribonuclease-1_AS | |
| FLNA | Antibody/Immunoglobulin | yes | Filamin/ABP280_rpt, Actinin_actin-bd_CS, CH_dom | |
| ABCD1 | Transporter | yes | 7.6.2.4 | ABC_transporter-like_ATP-bd, AAA+_ATPase, FA_transporter |
| ARHGAP4 | Scaffold/PPI | no | RhoGAP_dom, FCH_dom, SH3_domain |
Expression context
Cohort genes with no expression data: 0.
6 cohort genes are a single-cell marker in ≥1 SCXA experiment.
Breadth distribution (Bgee present_calls)
| Bucket | Genes |
|---|---|
| narrow (1-5 tissues) | 0 |
| moderate (6-20) | 1 |
| broad (>20) | 6 |
| unknown | 0 |
Top tissues across cohort
| Tissue | Cohort genes |
|---|---|
| popliteal artery | 2 |
| left ovary | 1 |
| left uterine tube | 1 |
| biceps brachii | 1 |
| skeletal muscle tissue of biceps brachii | 1 |
| skeletal muscle tissue of rectus abdominis | 1 |
| left testis | 1 |
| male germ line stem cell (sensu Vertebrata) in testis | 1 |
| primordial germ cell in gonad | 1 |
| gastrocnemius | 1 |
| gluteal muscle | 1 |
| hindlimb stylopod muscle | 1 |
| right coronary artery | 1 |
| tibial artery | 1 |
| ileal mucosa | 1 |
| left adrenal gland | 1 |
| left adrenal gland cortex | 1 |
| granulocyte | 1 |
| monocyte | 1 |
| spleen | 1 |
Per-gene tissue summary (top 30)
| Symbol | Bgee breadth | FANTOM5 breadth | SCXA | Top tissues |
|---|---|---|---|---|
| EMD | 284 | ubiquitous | marker | left ovary, left uterine tube, popliteal artery |
| FHL1 | 291 | ubiquitous | marker | skeletal muscle tissue of rectus abdominis, biceps brachii, skeletal muscle tissue of biceps brachii |
| TEX28 | 19 | tissue_specific | yes | primordial germ cell in gonad, male germ line stem cell (sensu Vertebrata) in testis, left testis |
| DNASE1L1 | 283 | ubiquitous | marker | hindlimb stylopod muscle, gastrocnemius, gluteal muscle |
| FLNA | 285 | ubiquitous | marker | right coronary artery, popliteal artery, tibial artery |
| ABCD1 | 201 | ubiquitous | marker | ileal mucosa, left adrenal gland cortex, left adrenal gland |
| ARHGAP4 | 229 | broad | marker | granulocyte, spleen, monocyte |
Protein interactions among cohort
Intra-cohort edges: 1.
Hub genes (top 10 by interactor count)
| Symbol | Interactor count |
|---|---|
| FLNA | 5,321 |
| EMD | 3,503 |
| FHL1 | 1,431 |
| ABCD1 | 1,181 |
| ARHGAP4 | 1,088 |
| DNASE1L1 | 1,012 |
| TEX28 | 407 |
Intra-cohort edges
| A | B | Sources |
|---|---|---|
| EMD | FHL1 | string_interaction |
Structural data
PDB: 5 · AlphaFold-only: 2 · No structure: 0
Cohort genes with PDB structures (top 30)
| Symbol | UniProt | PDB entries |
|---|---|---|
| FLNA | P21333 | 26 |
| ABCD1 | P33897 | 14 |
| EMD | P50402 | 6 |
| FHL1 | Q13642 | 4 |
| ARHGAP4 | P98171 | 1 |
AlphaFold-only cohort genes (top 30 by pLDDT)
| Symbol | UniProt | pLDDT |
|---|---|---|
| DNASE1L1 | P49184 | 90.83 |
| TEX28 | O15482 | 75.02 |
Function
Pathway analysis
Distinct Reactome pathways touched by cohort: 34. Enrichment computed across 7 evidence-associated genes (5 with Reactome annotation).
Pathways by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 5 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| Pathway | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| Defective ABCD1 causes ALD | 1 | 1142.0× | 0.021 | ABCD1 |
| alpha-linolenic (omega3) and linoleic (omega6) acid metabolism | 1 | 380.7× | 0.021 | ABCD1 |
| OAS antiviral response | 1 | 253.8× | 0.021 | FLNA |
| Linoleic acid (LA) metabolism | 1 | 228.4× | 0.021 | ABCD1 |
| GP1b-IX-V activation signalling | 1 | 190.3× | 0.021 | FLNA |
| Beta-oxidation of very long chain fatty acids | 1 | 175.7× | 0.021 | ABCD1 |
| Depolymerization of the Nuclear Lamina | 1 | 152.3× | 0.021 | EMD |
| alpha-linolenic acid (ALA) metabolism | 1 | 142.8× | 0.021 | ABCD1 |
| Peroxisomal lipid metabolism | 1 | 134.3× | 0.021 | ABCD1 |
| Cell-extracellular matrix interactions | 1 | 134.3× | 0.021 | FLNA |
| ABC transporters in lipid homeostasis | 1 | 120.2× | 0.021 | ABCD1 |
| Initiation of Nuclear Envelope (NE) Reformation | 1 | 120.2× | 0.021 | EMD |
| RHO GTPases activate PAKs | 1 | 108.8× | 0.021 | FLNA |
| Class I peroxisomal membrane protein import | 1 | 103.8× | 0.021 | ABCD1 |
| Insertion of tail-anchored proteins into the endoplasmic reticulum membrane | 1 | 95.2× | 0.021 | EMD |
| Nuclear Envelope Breakdown | 1 | 91.4× | 0.021 | EMD |
| ABC transporter disorders | 1 | 87.8× | 0.021 | ABCD1 |
| RAC1 GTPase cycle | 2 | 24.4× | 0.021 | EMD, ARHGAP4 |
| RHOD GTPase cycle | 1 | 40.8× | 0.043 | EMD |
| Protein localization | 1 | 38.1× | 0.044 | ABCD1 |
| RHOG GTPase cycle | 1 | 29.7× | 0.054 | EMD |
| Disorders of transmembrane transporters | 1 | 27.9× | 0.054 | ABCD1 |
| Fatty acid metabolism | 1 | 26.2× | 0.054 | ABCD1 |
| RAC2 GTPase cycle | 1 | 25.4× | 0.054 | EMD |
| ABC-family protein mediated transport | 1 | 24.3× | 0.054 | ABCD1 |
| RAC3 GTPase cycle | 1 | 23.8× | 0.054 | EMD |
| Platelet degranulation | 1 | 17.6× | 0.070 | FLNA |
| RHOA GTPase cycle | 1 | 14.9× | 0.079 | ARHGAP4 |
| CDC42 GTPase cycle | 1 | 14.5× | 0.079 | ARHGAP4 |
| Metabolism of lipids | 1 | 6.3× | 0.169 | ABCD1 |
GO biological processes by enrichment
Over-representation of cohort genes vs the genome-wide background (hypergeometric test, Benjamini-Hochberg FDR; fold = observed/expected over 6 annotated cohort genes). Counts and members are kept as ground-truth; sorted by enrichment.
| GO term | Cohort genes | Fold | FDR | Sample cohort genes |
|---|---|---|---|---|
| positive regulation of potassium ion transmembrane transport | 2 | 330.4× | 0.001 | FHL1, FLNA |
| regulation of membrane repolarization during atrial cardiac muscle cell action potential | 1 | 2808.7× | 0.010 | FLNA |
| regulation of membrane repolarization during cardiac muscle cell action potential | 1 | 2808.7× | 0.010 | FLNA |
| peroxisomal membrane transport | 1 | 1404.3× | 0.010 | ABCD1 |
| very long-chain fatty-acyl-CoA catabolic process | 1 | 1404.3× | 0.010 | ABCD1 |
| tubulin deacetylation | 1 | 936.2× | 0.010 | FLNA |
| positive regulation of unsaturated fatty acid biosynthetic process | 1 | 936.2× | 0.010 | ABCD1 |
| formation of radial glial scaffolds | 1 | 702.2× | 0.010 | FLNA |
| sterol homeostasis | 1 | 702.2× | 0.010 | ABCD1 |
| adenylate cyclase-inhibiting dopamine receptor signaling pathway | 1 | 561.7× | 0.010 | FLNA |
| long-chain fatty acid import into peroxisome | 1 | 561.7× | 0.010 | ABCD1 |
| establishment of Sertoli cell barrier | 1 | 561.7× | 0.010 | FLNA |
| regulation of fatty acid beta-oxidation | 1 | 468.1× | 0.010 | ABCD1 |
| long-chain fatty acid catabolic process | 1 | 468.1× | 0.010 | ABCD1 |
| myelin maintenance | 1 | 468.1× | 0.010 | ABCD1 |
| regulation of mitochondrial depolarization | 1 | 468.1× | 0.010 | ABCD1 |
| protein localization to bicellular tight junction | 1 | 468.1× | 0.010 | FLNA |
| negative regulation of transcription by RNA polymerase I | 1 | 401.2× | 0.010 | FLNA |
| fatty acid elongation | 1 | 401.2× | 0.010 | ABCD1 |
| very long-chain fatty acid catabolic process | 1 | 401.2× | 0.010 | ABCD1 |
| nuclear membrane organization | 1 | 401.2× | 0.010 | EMD |
| muscle organ development | 2 | 55.6× | 0.010 | EMD, FHL1 |
| blood coagulation, intrinsic pathway | 1 | 351.1× | 0.011 | FLNA |
| regulation of atrial cardiac muscle cell membrane depolarization | 1 | 312.1× | 0.012 | FHL1 |
| negative regulation of fibroblast migration | 1 | 255.3× | 0.013 | ARHGAP4 |
| positive regulation of fatty acid beta-oxidation | 1 | 255.3× | 0.013 | ABCD1 |
| fatty acid derivative biosynthetic process | 1 | 255.3× | 0.013 | ABCD1 |
| positive regulation of platelet activation | 1 | 216.1× | 0.013 | FLNA |
| regulation of cellular response to oxidative stress | 1 | 216.1× | 0.013 | ABCD1 |
| positive regulation of integrin-mediated signaling pathway | 1 | 216.1× | 0.013 | FLNA |
Therapeutics
Drug target analysis
Approved (phase 4): 0 · Phase ≥3: 0 · Phased (≥1): 1 · Undrugged: 6
Druggability breadth: 2 of 7 evidence-associated genes (29%) have a ChEMBL target (buckets above are over the deeply-mined display cohort).
Top cohort targets by molecule count
| Symbol | Molecules | Max phase |
|---|---|---|
| FLNA | 1 | 2 |
| EMD | 0 | 0 |
| FHL1 | 0 | 0 |
| TEX28 | 0 | 0 |
| DNASE1L1 | 0 | 0 |
| ABCD1 | 0 | 0 |
| ARHGAP4 | 0 | 0 |
Drugs targeting cohort genes (top 30)
| Molecule | Max phase | Targets in cohort |
|---|---|---|
| MOLIBRESIB | 2 | FLNA |
Bioactivity and enzyme data
Enzyme cohort genes (≥1 EC): 1.
Cohort genes with ChEMBL bioactivity (full, sorted by assay count)
| Symbol | Assays | Type breakdown |
|---|---|---|
| FLNA | 7 | Binding:7 |
| EMD | 1 | Binding:1 |
Cohort enzymes (BRENDA EC)
| Symbol | EC numbers | Names |
|---|---|---|
| ABCD1 | 7.6.2.4 | ABC-type fatty-acyl-CoA transporter |
Pharmacogenomics
Cohort genes with a PharmGKB record: 7; with CPIC/DPWG dosing guidelines: 0.
No cohort gene has a CPIC/DPWG genotype-guided dosing guideline (PharmGKB).
Chemical tractability of cohort targets
1 approved/phased compounds have measured bioactivity against a cohort gene (and aren’t yet in disease-level trials). This is a research / tractability signal, NOT a therapeutic recommendation — a bioactivity row often reflects off-target or screening binding (e.g. promiscuous kinase inhibitors against a cohort kinase), implying no disease mechanism.
| Compound | Max phase | Cohort target (bioactivity) |
|---|---|---|
| MOLIBRESIB | 2 | FLNA |
Druggability pyramid
Cohort genes binned by druggability tier (high → low):
| Tier | Definition | Genes | Symbols |
|---|---|---|---|
| A | Approved (phase 4 drug) | 0 | |
| B | Phased (≥1) drug, not yet approved | 1 | FLNA |
| C | Druggable family + PDB, no drug | 1 | ABCD1 |
| D | Druggable family + AlphaFold only, no drug | 1 | DNASE1L1 |
| E | Difficult family or no structure, no drug | 4 | EMD, FHL1, TEX28, ARHGAP4 |
Undrugged target profiles
6 cohort genes are undrugged. Ranked by ‘starting-point quality’ (assay depth + drugged-partner adjacency).
| Symbol | ChEMBL assays | Drugged partners (top 3) |
|---|---|---|
| EMD | 1 | — |
| FHL1 | 0 | — |
| TEX28 | 0 | — |
| DNASE1L1 | 0 | — |
| ABCD1 | 0 | — |
| ARHGAP4 | 0 | — |
Clinical trials & evidence
Clinical trials
Clinical trials: 1.
Phase distribution (across all retrieved trials)
| Phase | Trials |
|---|---|
| Not specified | 1 |
Top trials by phase / activity
| NCT | Phase | Status | Title |
|---|---|---|---|
| NCT03058185 | Not specified | RECRUITING | Observatoire Des Patients Atteints de Laminopathies et Emerinopathies (Observatory for PAtients With Laminopathies and Emerinopathies) |