ABCC1

gene
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Also known as GS-X

Summary

ABCC1 (ATP binding cassette subfamily C member 1 (ABCC1 blood group), HGNC:51) is a protein-coding gene on chromosome 16p13.11, encoding Multidrug resistance-associated protein 1 (P33527). Mediates export of organic anions and drugs from the cytoplasm.

The protein encoded by this gene is a member of the superfamily of ATP-binding cassette (ABC) transporters. ABC proteins transport various molecules across extra-and intra-cellular membranes. ABC genes are divided into seven distinct subfamilies (ABC1, MDR/TAP, MRP, ALD, OABP, GCN20, White). This full transporter is a member of the MRP subfamily which is involved in multi-drug resistance. This protein functions as a multispecific organic anion transporter, with oxidized glutatione, cysteinyl leukotrienes, and activated aflatoxin B1 as substrates. This protein also transports glucuronides and sulfate conjugates of steroid hormones and bile salts. Alternatively spliced variants of this gene have been described but their full-length nature is unknown.

Source: NCBI Gene 4363 — RefSeq curated summary.

At a glance

  • Gene–disease (curated): hearing loss, autosomal dominant 77 (Moderate, GenCC) — +1 more curated relationship
  • GWAS associations: 22
  • Clinical variants (ClinVar): 564 total — 116 pathogenic, 41 likely-pathogenic
  • Phenotypes (HPO): 5
  • Druggable target: yes — 23 molecules with ChEMBL bioactivity
  • MANE Select transcript: NM_004996

Identifiers

Gene identifiers

FieldValue
HGNC IDHGNC:51
Approved symbolABCC1
NameATP binding cassette subfamily C member 1 (ABCC1 blood group)
Location16p13.11
Locus typegene with protein product
StatusApproved
AliasesGS-X
Ensembl geneENSG00000103222
Ensembl biotypeprotein_coding
OMIM158343
Entrez4363

Gene structure

Transcript identifiers

Ensembl transcripts: 38 — 31 protein_coding, 3 retained_intron, 3 protein_coding_CDS_not_defined, 1 nonsense_mediated_decay

ENST00000399408, ENST00000399410, ENST00000572882, ENST00000574224, ENST00000574761, ENST00000575422, ENST00000576557, ENST00000676806, ENST00000677164, ENST00000678422, ENST00000679043, ENST00000903504, ENST00000914138, ENST00000914139, ENST00000914140, ENST00000914141, ENST00000914142, ENST00000914143, ENST00000914144, ENST00000914145, ENST00000914146, ENST00000914147, ENST00000914148, ENST00000914149, ENST00000914150, ENST00000914151, ENST00000914152, ENST00000914153, ENST00000914154, ENST00000914155, ENST00000914156, ENST00000914157, ENST00000958971, ENST00000958972, ENST00000958973, ENST00000958974, ENST00000958975, ENST00000958977

RefSeq mRNA: 2 — MANE Select: NM_004996 NM_004996, NM_019862

CCDS: CCDS42122, CCDS45427

Canonical transcript exons

ENST00000399410 — 31 exons

ExonStartEnd
ENSE000008299691606815616068302
ENSE000008299821607164216071729
ENSE000008299861607632616076401
ENSE000008300491612197516122174
ENSE000008300601612478916124915
ENSE000008300621612581016125911
ENSE000008300691613178916131935
ENSE000008300831613435016134508
ENSE000008300861613647816136644
ENSE000008300931613836416138558
ENSE000012046191605609216056295
ENSE000018367501614117316143053
ENSE000034612001607935216079478
ENSE000034723021610673816106873
ENSE000035336111610262716102717
ENSE000035776961608336616083542
ENSE000036264081608682416086991
ENSE000036340341603647216036603
ENSE000036371141605272416052816
ENSE000036377541604814216048303
ENSE000036524021603310916033170
ENSE000036529541601649616016621
ENSE000036588841611476616115076
ENSE000036591391604583616046013
ENSE000036880011609040516090588
ENSE000036918541611137516111582
ENSE000037226221600781616007992
ENSE000037291851600977616009901
ENSE000037379121604445016044680
ENSE000037404081601449116014628
ENSE000037490021594961615949799

Expression profiles

Bgee: expression breadth ubiquitous, 134 present calls, max score 95.56.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 23.2593 / max 545.4387, expressed in 1812 samples.

FANTOM5 promoters (5 alternative TSS)

Promoter IDTPM avgSamples expressed
15294720.74201807
1529461.50191114
1529630.5299251
1529570.4620171
1529540.023713

Top tissues by expression

134 total, by Bgee expression score (0-100, higher = more expressed):

TissueAnatomy IDExpression scoreQuality
lower esophagus mucosaUBERON:003583495.56gold quality
lower esophagusUBERON:001347395.09gold quality
lower esophagus muscularis layerUBERON:003583395.08gold quality
stromal cell of endometriumCL:000225594.96gold quality
esophagogastric junction muscularis propriaUBERON:003584193.68gold quality
esophagusUBERON:000104393.31gold quality
ascending aortaUBERON:000149693.27gold quality
thoracic aortaUBERON:000151593.25gold quality
mucosa of stomachUBERON:000119993.16gold quality
left lobe of thyroid glandUBERON:000112093.15gold quality
right lobe of thyroid glandUBERON:000111992.91gold quality
descending thoracic aortaUBERON:000234592.86gold quality
thyroid glandUBERON:000204692.66gold quality
esophagus mucosaUBERON:000246991.85gold quality
adrenal tissueUBERON:001830391.46gold quality
prostate glandUBERON:000236791.04gold quality
bone marrow cellCL:000209290.97gold quality
skeletal muscle tissueUBERON:000113490.82gold quality
spleenUBERON:000210690.33gold quality
body of stomachUBERON:000116189.86gold quality
upper lobe of left lungUBERON:000895289.73gold quality
muscle layer of sigmoid colonUBERON:003580589.71gold quality
muscle tissueUBERON:000238589.53gold quality
fundus of stomachUBERON:000116089.30gold quality
urinary bladderUBERON:000125589.21gold quality
stomachUBERON:000094589.18gold quality
gastrocnemiusUBERON:000138889.15gold quality
lymph nodeUBERON:000002989.05gold quality
muscle of legUBERON:000138388.85gold quality
lungUBERON:000204888.65gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

ExperimentMarker?Max mean expression
E-ANND-3yes5.49

Regulation

Is transcription factor: no

Upstream regulators (CollecTRI, top): APP, ATF3, CEBPA, ETS1, FOXC1, GABPA, JUN, MYCN, NFE2L2, PAX1, PPARA, PSEN1, RBPJ, RUNX3, SP1, SP3, TP53, YBX1

miRNA regulators (miRDB)

92 targeting ABCC1, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):

miRNAMax scoreAvg scoremiRNA target_count
HSA-MIR-5011-5P100.0083.465820
HSA-MIR-190A-3P100.0080.355520
HSA-MIR-1277-5P100.0073.955056
HSA-MIR-3163100.0077.238605
HSA-MIR-4673100.0066.641490
HSA-MIR-548C-3P99.9974.017587
HSA-MIR-520D-5P99.9873.344883
HSA-MIR-524-5P99.9873.434882
HSA-MIR-145-5P99.9271.131836
HSA-MIR-5195-3P99.9270.921877
HSA-MIR-6783-3P99.8967.922059
HSA-MIR-1343-3P99.8966.781815
HSA-MIR-6780A-5P99.8866.692776
HSA-MIR-659-3P99.8570.691620
HSA-MIR-4728-5P99.8569.394718
HSA-MIR-3180-5P99.8269.122422
HSA-MIR-6756-5P99.8267.972466
HSA-MIR-430799.8270.453374
HSA-MIR-6785-5P99.8268.684428
HSA-MIR-6875-3P99.8270.262983
HSA-MIR-313399.8170.923506
HSA-MIR-6739-5P99.8067.872806
HSA-MIR-205299.7969.372031
HSA-MIR-1273H-5P99.7766.322471
HSA-MIR-6733-5P99.7467.942759
HSA-MIR-430699.7270.503630
HSA-MIR-149-3P99.7268.223963
HSA-MIR-4677-5P99.7070.091940
HSA-MIR-30B-3P99.7065.762325
HSA-MIR-6779-5P99.7065.762363

Literature-anchored findings (GeneRIF, showing 40)

  • sequence deletion in Pseudoxanthoma elasticum (PMID:11439001)
  • Immunolabeling and dye efflux assays indicate that MRP activity and functional expression levels are elevated in monocyte-derived dendritic cells when compared to those present in parental monocytes. (PMID:11600213)
  • polyclonal antibodies recognizing both human and rodent MRP1 (PMID:11689020)
  • MDR transpiorter proteins have a limited role in the treatment failure of patients treated with ifarubicin-based regimens (PMID:11755464)
  • overexpression of MRP1 in DS brain may have some relevance to the disorder either by deranging substrate homeostasis or limiting drug access. (PMID:11771758)
  • In vivo analysis of human multidrug resistance protein 1 (MRP1) activity using transient expression of fluorescently tagged MRP1. (PMID:11809686)
  • Expression of MRP1 can be induced by nonsteroidal anti-inflammatory drugs in a reactive oxygen species-dependent but cyclooxygenase-2-independent manner. (PMID:11820781)
  • determination of substrate specificity (PMID:11925441)
  • MRP1 mRNA was detected in non-HTLV-1 Tax producing ATL cell lines, but MRP1 is not activated by transfected HTLV-1 Tax expression. (PMID:11937269)
  • no difference of expression between diagnosis and relapse of AML; not associated with clinical resistant disease in AML (PMID:11986944)
  • Antisense hairpin loop oligonucleotides as inhibitors of expression of multidrug resistance-associated protein 1: their stability in fetal calf serum and human plasma (PMID:11995968)
  • Multidrug resistance-associated protein–reduction of expression in human leukaemia cells by antisense phosphorothioate olignucleotides (PMID:11996108)
  • rate of uptake of arsenic trioxide and of antimony tartrate in GLC4 and GLC4/ADR cells overexpressing MRP1 (PMID:12018890)
  • ATP hydrolysis causes a conformational change in MRP1 that reduces the affinity of the protein for this inhibitor (PMID:12034727)
  • Mutations in mrp1 results in decreased organic anion transport and increased doxorubicin resistance in Hela cells (PMID:12042670)
  • directly interacts with several tyrosine kinase inhibitors (PMID:12084474)
  • cytoplasmic retraction of the amino terminus (PMID:12119019)
  • S-decyl-glutathione nonspecifically stimulates the ATPase activity of the nucleotide-binding domains of the human multidrug resistance-associated protein, MRP1 (ABCC1). (PMID:12135486)
  • evidence for the role of glycosylation in accessibility of the extracellular domains of human MRP1 (PMID:12146977)
  • Results show efficient GTP hydrolysis by the N-terminal nucleotide binding domain (NBD1) of MRP1 (PMID:12163030)
  • importance of Lys(332) and His(335) in determining substrate specificity and of Asp(336) in overall transport activity (PMID:12186871)
  • the amino terminus of human MRP1 is important and that the Cys(7) residue plays a critical role in maintaining the proper structure and function of human MRP1 (PMID:12235150)
  • Trp residues are critical for the transport activity and substrate specificity of MRP1 (PMID:12388549)
  • MRP1 has a functional role in the maintenance of cellular folate homeostasis (PMID:12486126)
  • RNA expression of this protein in breast cancer correlates with response to chemotherapy. (PMID:12576456)
  • down- and up-regulation of MRP1 (and MRP3) expression can influence cellular folate homeostasis, in particular when cellular retention by polyglutamylation of folates is attenuated. (PMID:12628490)
  • MRP1 and MRP5 increase with trophoblast maturation, suggesting a particular role for these proteins in the organ functional developmen (PMID:12646196)
  • MRP1 does not have a role in increased resistance to oxidative stress (PMID:12653207)
  • ATP binding at nucleotide binding domain 1 at low concentration plays a more important regulatory role than the binding at high concentration and that ATP hydrolysis at nucleotide binding domain 2 plays a dominant role in LTC4 transport. (PMID:12783859)
  • A novel silent mutation G816A in exon 8 was found (PMID:12856092)
  • MRP1 and MRP2 were expressed in peripheral blood cells, with more than sevenfold higher MRP1 expression in all cell populations investigated. The MRP1 mRNA expression was highest in CD4+ cells >, followed by CD8+ > CD19+ > CD56+ cells. (PMID:12890151)
  • Trp653 is involved in the binding of ATP to the nucleotide-binding domain 1 of multidrug-resistance-associated protein 1. (PMID:12954082)
  • importance of polar and charged amino acid residues in transmembrane helix 14 of multidrug resistance protein 1 (MRP1/ABCC1) (PMID:12954620)
  • structural data for MRP1 that might be used to elucidate its mechanism of transport (PMID:14561746)
  • phospholipid translocation in the erythrocyte membrane depends on ATP and glutathione (PMID:14578045)
  • Basal membrane localization of MRP1 in the placental trophoblast. (PMID:14580377)
  • MRP1 transport function requres helices TM6, TM8, TM10, TM11, and TM14 and CL7 may play a differential role in coupling the activity of the nucleotide binding domains to the translocation of different substrates across the membrane (PMID:14722114)
  • MRP1 may be a target for MYCN-mediated gene regulation (PMID:14737110)
  • Refractory epilepsy phenotype in tuberous sclerosis can be associated with the expression of multidrug resistance MRP-1 transporter in epileptogenic cortical tubers. (PMID:14984901)
  • both signature sequences of MRP1 are involved in ATP hydrolysis and must be intact for the ATP hydrolysis and the transport by MRP1. (PMID:15155846)

Cross-species orthologs

14 orthologs

OrganismSymbolGene ID
danio_rerioabcc1ENSDARG00000104719
mus_musculusAbcc1ENSMUSG00000023088
rattus_norvegicusAbcc1ENSRNOG00000022305
drosophila_melanogasterl(2)03659FBGN0010549
drosophila_melanogasterCG7627FBGN0032026
drosophila_melanogasterMRPFBGN0032456
drosophila_melanogasterCG9270FBGN0032908
drosophila_melanogasterCG10505FBGN0034612
drosophila_melanogasterMrp5FBGN0038740
drosophila_melanogasterrdogFBGN0039644
drosophila_melanogasterCG11898FBGN0039645
drosophila_melanogasterCG31792FBGN0051792
drosophila_melanogasterMrp4FBGN0263316
caenorhabditis_elegansWBGENE00000477

Paralogs (11): CFTR (ENSG00000001626), ABCC8 (ENSG00000006071), ABCC2 (ENSG00000023839), ABCC9 (ENSG00000069431), ABCC6 (ENSG00000091262), ABCC3 (ENSG00000108846), ABCC5 (ENSG00000114770), ABCC11 (ENSG00000121270), ABCC10 (ENSG00000124574), ABCC4 (ENSG00000125257), ABCC12 (ENSG00000140798)

Protein

Protein identifiers

Multidrug resistance-associated protein 1P33527 (reviewed: P33527)

Alternative names: ATP-binding cassette sub-family C member 1, Glutathione-S-conjugate-translocating ATPase ABCC1, Leukotriene C(4) transporter

All UniProt accessions (5): P33527, A0A0A0MS99, A0A7I2V2E0, A0A7I2V4C6, I3L4X2

UniProt curated annotations — full annotation on UniProt →

Function. Mediates export of organic anions and drugs from the cytoplasm. Mediates ATP-dependent transport of glutathione and glutathione conjugates, leukotriene C4, estradiol-17-beta-o-glucuronide, methotrexate, antiviral drugs and other xenobiotics. Confers resistance to anticancer drugs by decreasing accumulation of drug in cells, and by mediating ATP- and GSH-dependent drug export. Hydrolyzes ATP with low efficiency. Catalyzes the export of sphingosine 1-phosphate from mast cells independently of their degranulation. Participates in inflammatory response by allowing export of leukotriene C4 from leukotriene C4-synthesizing cells. Mediates ATP-dependent, GSH-independent cyclic GMP-AMP (cGAMP) export. Thus, by limiting intracellular cGAMP concentrations negatively regulates the cGAS-STING pathway. Exports S-geranylgeranyl-glutathione (GGG) in lymphoid cells and stromal compartments of lymphoid organs. ABCC1 (via extracellular transport) with GGT5 (via GGG catabolism) establish GGG gradients within lymphoid tissues to position P2RY8-positive lymphocytes at germinal centers in lymphoid follicles and restrict their chemotactic transmigration from blood vessels to the bone marrow parenchyma. Mediates basolateral export of GSH-conjugated R- and S-prostaglandin A2 diastereomers in polarized epithelial cells.

Subunit / interactions. (Microbial infection) Interacts with human cytomegalovirus protein UL138; this interaction mediates MRP1 degradation via the lysosome.

Subcellular location. Cell membrane. Basolateral cell membrane.

Tissue specificity. Lung, testis and peripheral blood mononuclear cells.

Disease relevance. Deafness, autosomal dominant, 77 (DFNA77) [MIM:618915] A form of non-syndromic deafness characterized by adult onset of bilateral, postlingual, mild-to-severe sensorineural hearing loss. Sensorineural hearing loss results from damage to the neural receptors of the inner ear, the nerve pathways to the brain, or the area of the brain that receives sound information. The gene represented in this entry is involved in disease pathogenesis.

Activity regulation. MK 571 inhibits sphingosine 1-phosphate and leukotriene C4 export.

Similarity. Belongs to the ABC transporter superfamily. ABCC family. Conjugate transporter (TC 3.A.1.208) subfamily.

Isoforms (9)

UniProt IDNamesCanonical?
P33527-11, Allexonsyes
P33527-22, Delexon-17
P33527-33, Delexon-18
P33527-44, Delexon-30
P33527-55, Delexon-17-18
P33527-66, Delexon-17-30
P33527-77, Delexon-18-30
P33527-88, Delexon-17-18-30
P33527-99

RefSeq proteins (2): NP_004987, NP_063915 (=MANE)

Domains & families (InterPro)

IDNameType
IPR003439ABC_transporter-like_ATP-bdDomain
IPR003593AAA+_ATPaseDomain
IPR005292MRPFamily
IPR011527ABC1_TM_domDomain
IPR017871ABC_transporter-like_CSConserved_site
IPR027417P-loop_NTPaseHomologous_superfamily
IPR036640ABC1_TM_sfHomologous_superfamily
IPR050173ABC_transporter_C-likeFamily
IPR056227TMD0_ABCDomain

Pfam: PF00005, PF00664, PF24357

Enzyme classification (BRENDA):

  • EC 7.6.2.2 — ABC-type xenobiotic transporter (BRENDA: 49 organisms, 716 substrates, 471 inhibitors, 280 Km, 31 kcat entries)
  • EC 7.6.2.3 — ABC-type glutathione-S-conjugate transporter (BRENDA: 8 organisms, 145 substrates, 63 inhibitors, 16 Km, 0 kcat entries)

Substrate kinetics (BRENDA)

75 substrates with measured Km, best-characterized 15. Km ranges are aggregated across organisms/conditions.

SubstrateKm (mM)Measurements
ATP0.0009–9105
VERAPAMIL/IN0.0006–0.005811
VINBLASTINE/IN0.0002–0.145511
ESTRADIOL 17-BETA-D-GLUCURONIDE/IN0.013–0.177
LEUKOTRIENE C4/IN7
METHOTREXATE/IN0.24–0.7766
NICARDIPINE/IN0.0004–0.00266
PROGESTERONE/IN0.0038–0.02076
CYCLIC GUANOSINE MONOPHOSPHATE/IN0.36–25
VERAPAMIL0.0022–0.01155
ATP0.0865–0.915
COLCHICINE/IN0.037–0.724
FOLIC ACID/IN0.13–0.264
PACLITAXEL/IN0.0007–0.00094
RHODAMINE 123/IN0.0118–0.03544

Catalyzed reactions (Rhea), 10 shown:

  • an S-substituted glutathione(in) + ATP + H2O = an S-substituted glutathione(out) + ADP + phosphate + H(+) (RHEA:19121)
  • daunorubicin(in) + ATP + H2O = daunorubicin(out) + ADP + phosphate + H(+) (RHEA:33147)
  • sphing-4-enine 1-phosphate(in) + ATP + H2O = sphing-4-enine 1-phosphate(out) + ADP + phosphate + H(+) (RHEA:38951)
  • leukotriene C4(in) + ATP + H2O = leukotriene C4(out) + ADP + phosphate + H(+) (RHEA:38963)
  • 17beta-estradiol 17-O-(beta-D-glucuronate)(in) + ATP + H2O = 17beta-estradiol 17-O-(beta-D-glucuronate)(out) + ADP + phosphate + H(+) (RHEA:60128)
  • vincristine(in) + ATP + H2O = vincristine(out) + ADP + phosphate + H(+) (RHEA:60160)
  • 2’,3’-cGAMP(in) + ATP + H2O = 2’,3’-cGAMP(out) + ADP + phosphate + H(+) (RHEA:74887)
  • S-[(2E,6E,10E)-geranylgeranyl]-L-glutathione(in) + ATP + H2O = S-[(2E,6E,10E)-geranylgeranyl]-L-glutathione(out) + ADP + phosphate + H(+) (RHEA:81611)
  • prostaglandin A2-S-(R)-glutathione(in) + ATP + H2O = prostaglandin A2-S-(R)-glutathione(out) + ADP + phosphate + H(+) (RHEA:81695)
  • prostaglandin A2-S-(S)-glutathione(in) + ATP + H2O = prostaglandin A2-S-(S)-glutathione(out) + ADP + phosphate + H(+) (RHEA:81699)

UniProt features (123 total): mutagenesis site 24, sequence variant 19, topological domain 18, transmembrane region 17, strand 11, helix 10, modified residue 6, domain 4, binding site 4, splice variant 4, glycosylation site 3, turn 2, chain 1

Structure

Experimental structures (PDB)

5 structures.

PDBMethodResolution (Å)
2CBZX-RAY DIFFRACTION1.5
4C3ZX-RAY DIFFRACTION2.1
8VUXELECTRON MICROSCOPY3.54
8VT4ELECTRON MICROSCOPY3.79
8VVCELECTRON MICROSCOPY4.32

Predicted structure (AlphaFold)

ModelpLDDTFraction very-high
AF-P33527-F183.010.42

Functional residue map

Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.

Ligand- & substrate-binding residues (4): 653; 678–685; 713; 1327–1334

Post-translational modifications (6): 277, 289, 503, 905, 915, 930

Glycosylation sites (3): 19, 23, 1006

Mutagenesis-validated functional residues (24):

PositionPhenotype
580no effect.
581no effect.
585no effect.
597increases resistance to vincristine and decreases resistance to vp-16.
604increases estradiol glucuronide transport.
605decreases resistance to vincristine, vp-16 and doxorubicin.
792only partially affects protein maturation; impairs leukotriene c4 transport.
792impairs protein maturation and leukotriene c4 transport.
793no effect on protein maturation and leukotriene c4 transport.
1046slightly impairs leukotriene c4 and estradiol glucuronide transport.
1084impairs leukotriene c4 and estradiol glucuronide transport.
1089decreases resistance to anthracyclines.
1089no effect.
1089abolishes resistance to anthracyclines.
1131slightly impairs leukotriene c4 and estradiol glucuronide transport.
1138strongly reduced transport of leukotriene c4, estradiol glucuronide and of glutathione.
1141reduced transport of leukotriene c4 and of glutathione.
1141reduced transport of glutathione.
1142reduced transport of leukotriene c4, estradiol glucuronide and of glutathione.
1246impairs estradiol glucuronide transport.
1246impairs estradiol glucuronide transport; loss of resistance to alkaloid vincristine, cationic anthracyclines, epipodophy
1333impairs leukotriene c4 transport.
1333reduced cgamp export.
1454–1455impairs leukotriene c4 transport.

Function

Pathways and Gene Ontology

Reactome pathways

24 pathways

IDPathway
R-HSA-1660661Sphingolipid de novo biosynthesis
R-HSA-189483Heme degradation
R-HSA-2142691Synthesis of Leukotrienes (LT) and Eoxins (EX)
R-HSA-382556ABC-family protein mediated transport
R-HSA-9707564Cytoprotection by HMOX1
R-HSA-9753281Paracetamol ADME
R-HSA-9758890Transport of RCbl within the body
R-HSA-9818032NFE2L2 regulating MDR associated enzymes
R-HSA-1430728Metabolism
R-HSA-189445Metabolism of porphyrins
R-HSA-196741Cobalamin (Cbl, vitamin B12) transport and metabolism
R-HSA-196849Metabolism of water-soluble vitamins and cofactors
R-HSA-196854Metabolism of vitamins and cofactors
R-HSA-2142753Arachidonate metabolism
R-HSA-2262752Cellular responses to stress
R-HSA-382551Transport of small molecules
R-HSA-428157Sphingolipid metabolism
R-HSA-556833Metabolism of lipids
R-HSA-8953897Cellular responses to stimuli
R-HSA-8978868Fatty acid metabolism
R-HSA-9711123Cellular response to chemical stress
R-HSA-9748784Drug ADME
R-HSA-9755511KEAP1-NFE2L2 pathway
R-HSA-9759194Nuclear events mediated by NFE2L2

MSigDB gene sets: 436 (showing top): GOBP_MEMORY, GOBP_RESPONSE_TO_NITROGEN_COMPOUND, GOBP_EPITHELIUM_DEVELOPMENT, PID_S1P_S1P1_PATHWAY, KANG_DOXORUBICIN_RESISTANCE_UP, GOBP_COGNITION, GOBP_BEHAVIOR, MODULE_169, GOBP_CIRCULATORY_SYSTEM_PROCESS, GOBP_CELL_CHEMOTAXIS, GOBP_INFLAMMATORY_RESPONSE, GOBP_RESPONSE_TO_PEPTIDE, GCM_MSN, MODULE_151, GOBP_RESPONSE_TO_FLUID_SHEAR_STRESS

GO Biological Process (69): tissue homeostasis (GO:0001894), granuloma formation (GO:0002432), inflammatory response to antigenic stimulus (GO:0002437), endothelium development (GO:0003158), leukotriene metabolic process (GO:0006691), glutathione metabolic process (GO:0006749), xenobiotic metabolic process (GO:0006805), memory (GO:0007613), glucocorticoid metabolic process (GO:0008211), response to xenobiotic stimulus (GO:0009410), response to toxic substance (GO:0009636), gene expression (GO:0010467), cobalamin transport (GO:0015889), leukotriene biosynthetic process (GO:0019370), amygdala development (GO:0021764), hippocampus development (GO:0021766), neurogenesis (GO:0022008), sphingolipid biosynthetic process (GO:0030148), protein localization to cell surface (GO:0034394), response to fluid shear stress (GO:0034405), cellular response to oxidative stress (GO:0034599), glutathione transmembrane transport (GO:0034775), multicellular organism growth (GO:0035264), exploration behavior (GO:0035640), macrophage activation (GO:0042116), heme catabolic process (GO:0042167), regulation of membrane potential (GO:0042391), superoxide anion generation (GO:0042554), xenobiotic transport (GO:0042908), pigment accumulation (GO:0043476), phospholipid translocation (GO:0045332), cell redox homeostasis (GO:0045454), antigen processing and presentation of lipid antigen via MHC class Ib (GO:0048003), amyloid-beta metabolic process (GO:0050435), hydrogen peroxide biosynthetic process (GO:0050665), positive regulation of inflammatory response (GO:0050729), defense response to Gram-positive bacterium (GO:0050830), NK T cell activation (GO:0051132), response to glucocorticoid (GO:0051384), establishment of localization in cell (GO:0051649)

GO Molecular Function (19): ATP binding (GO:0005524), ABC-type xenobiotic transporter activity (GO:0008559), bilirubin transmembrane transporter activity (GO:0015127), ABC-type vitamin B12 transporter activity (GO:0015420), ABC-type glutathione S-conjugate transporter activity (GO:0015431), efflux transmembrane transporter activity (GO:0015562), ATP hydrolysis activity (GO:0016887), ATPase-coupled carboxylic acid transmembrane transporter activity (GO:0033284), ATPase-coupled lipid transmembrane transporter activity (GO:0034040), glutathione transmembrane transporter activity (GO:0034634), ATPase-coupled transmembrane transporter activity (GO:0042626), xenobiotic transmembrane transporter activity (GO:0042910), obsolete ATPase-coupled inorganic anion transmembrane transporter activity (GO:0043225), sphingolipid intramembrane carrier activity (GO:0046624), carboxylic acid transmembrane transporter activity (GO:0046943), ABC-type transporter activity (GO:0140359), nucleotide binding (GO:0000166), hydrolase activity (GO:0016787), transmembrane transporter activity (GO:0022857)

GO Cellular Component (7): plasma membrane (GO:0005886), basal plasma membrane (GO:0009925), membrane (GO:0016020), basolateral plasma membrane (GO:0016323), apical plasma membrane (GO:0016324), lateral plasma membrane (GO:0016328), extracellular exosome (GO:0070062)

Reactome top-level categories

Rollup of top-14 pathways:

CategoryPathways
Metabolism3
Metabolism of lipids2
Sphingolipid metabolism1
Metabolism of porphyrins1
Arachidonate metabolism1
Transport of small molecules1
Cellular response to chemical stress1
Drug ADME1
Cobalamin (Cbl, vitamin B12) transport and metabolism1
Nuclear events mediated by NFE2L21
Metabolism of water-soluble vitamins and cofactors1
Metabolism of vitamins and cofactors1
Fatty acid metabolism1
Cellular responses to stimuli1

GO top-level categories

Rollup of top GO terms by namespace:

CategoryTerms
ABC-type transporter activity3
transmembrane transporter activity3
ATPase-coupled transmembrane transporter activity3
plasma membrane region3
response to chemical2
limbic system development2
anatomical structure development2
sulfur compound transmembrane transporter activity2
ATP-dependent activity2
cellular anatomical structure2
multicellular organismal-level homeostasis1
anatomical structure homeostasis1
immune effector process1
chronic inflammatory response1
inflammatory response1
immune response1
epithelium development1
icosanoid metabolic process1
modified amino acid metabolic process1
sulfur compound metabolic process1
metabolic process1
cellular response to xenobiotic stimulus1
learning or memory1
steroid metabolic process1
macromolecule biosynthetic process1
vitamin transport1
nitrogen compound transport1
leukotriene metabolic process1
icosanoid biosynthetic process1
pallium development1
nervous system development1
cell differentiation1
sphingolipid metabolic process1
lipid biosynthetic process1
intracellular protein localization1
response to stress1
adenyl ribonucleotide binding1
purine ribonucleoside triphosphate binding1
xenobiotic transmembrane transporter activity1
dicarboxylic acid transmembrane transporter activity1

Protein interactions and networks

STRING

2742 interactions, top by confidence (×1000):

Protein AProtein BPartner UniProtScore
ABCC1ABCG2Q9UNQ0969
ABCC1MRPS7Q9Y2R9925
ABCC1MVPQ14764691
ABCC1LTB4R2Q9NPC1684
ABCC1LTC4SQ16873674
ABCC1CTNNB1P35222637
ABCC1SPNS2Q8IVW8605
ABCC1MYCP01106591
ABCC1Q6RUI8Q6RUI8589
ABCC1SLCO1B1Q9Y6L6588
ABCC1CYP2B6P20813586
ABCC1SLCO1A2P46721584
ABCC1SLCO2B1O94956580
ABCC1ABCG1P45844579
ABCC1LTA4HP09960576

IntAct

69 interactions, top by confidence:

ABTypeScore
CFTRESYT2psi-mi:“MI:2364”(proximity)0.710
NIPAL1ESYT2psi-mi:“MI:0914”(association)0.640
UBXN8psi-mi:“MI:0914”(association)0.530
LGALS3PODXLpsi-mi:“MI:0914”(association)0.530
DNAJB8DNAJB6psi-mi:“MI:0914”(association)0.530
GPRC5BSTXBP3psi-mi:“MI:0914”(association)0.530
LPAR1TMEM223psi-mi:“MI:0914”(association)0.530
OPALINBTAF1psi-mi:“MI:0914”(association)0.530
pipB2SCDpsi-mi:“MI:0914”(association)0.460
NPM1ABCC1psi-mi:“MI:0915”(physical association)0.370
AZGP1ABCC1psi-mi:“MI:0915”(physical association)0.370
ABCC1TRAF3psi-mi:“MI:0915”(physical association)0.370
Kcnk1TRAPPC13psi-mi:“MI:0914”(association)0.350
psi-mi:“MI:0914”(association)0.350
ESYT2psi-mi:“MI:0914”(association)0.350
E5ESYT2psi-mi:“MI:0914”(association)0.350
HAX1psi-mi:“MI:0914”(association)0.350
TNFRSF10Bpsi-mi:“MI:0914”(association)0.350
CLN6SCAMP3psi-mi:“MI:0914”(association)0.350
SLC15A3psi-mi:“MI:0914”(association)0.350
UNC93B1psi-mi:“MI:0914”(association)0.350
PADDX39Apsi-mi:“MI:0914”(association)0.350
MTM9SF1psi-mi:“MI:0914”(association)0.350
pipB2PLOD2psi-mi:“MI:0914”(association)0.350
CTDP1ESYT2psi-mi:“MI:0914”(association)0.350
ALCAMLAMB1psi-mi:“MI:0914”(association)0.350
CMTM5TMEM120Bpsi-mi:“MI:0914”(association)0.350

BioGRID (207): ABCC1 (Affinity Capture-Western), ABCC1 (Co-purification), ABCC1 (Co-fractionation), ABCC1 (Affinity Capture-Western), ABCC1 (Reconstituted Complex), ABCC1 (Co-fractionation), ABCC1 (Co-fractionation), ABCC1 (Co-fractionation), ABCC1 (Co-fractionation), ABCC1 (Co-fractionation), ABCC1 (Co-fractionation), ABCC1 (Co-fractionation), ABCC1 (Co-fractionation), ECHS1 (Co-fractionation), HNRNPL (Co-fractionation)

ESM2 similar proteins: A2XCD4, A7KVC2, B2RX12, G5EE72, O15440, O35379, O60706, O88563, P33527, P70170, P82451, P91660, Q07DZ6, Q07E16, Q09427, Q09428, Q09429, Q10RX7, Q1LX78, Q28689, Q2QL83, Q2QLH0, Q42093, Q5F364, Q63120, Q63563, Q6UR05, Q6Y306, Q7DM58, Q7GB25, Q80WJ6, Q864R9, Q8CG09, Q8HXQ5, Q8LGU1, Q8VI47, Q8VZZ4, Q92887, Q96J65, Q9C8G9

Diamond homologs: A0A0D1CZ63, A0A0U1LQE1, A0A1U8QTJ9, A2XCD4, A7KVC2, B2RX12, E9Q236, F1M3J4, F9X9V4, G4N2B5, J9VQH1, O15438, O15439, O15440, O31708, O35379, O60706, O70127, O88269, O88563, O95255, P0CE69, P14772, P16875, P16877, P21439, P21440, P32386, P33527, P38735, P39109, P53049, P70170, P82451, P91660, P9WEL8, Q07QX6, Q08201, Q09427, Q0VQP5

SIGNOR signaling

5 interactions.

AEffectBMechanism
CSNK2A1up-regulatesABCC1phosphorylation
MYCN“up-regulates quantity by expression”ABCC1“transcriptional regulation”
doxorubicin“down-regulates activity”ABCC1“chemical inhibition”
daunorubicin“down-regulates activity”ABCC1“chemical inhibition”
(S)-verapamil“up-regulates activity”ABCC1“chemical activation”

Enriched among interaction partners

Reactome pathways and GO biological processes over-represented among this gene’s 89 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.

GO biological processes:

GO termPartnersFoldFDR
adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway514.2×8e-03
positive regulation of cytosolic calcium ion concentration710.6×3e-03

Disease & clinical

Clinical variants and AI predictions

ClinVar

564 variants total. Per-class counts are floors (≥ shown; pagination cap):

ClassificationCount (floor)
Pathogenic116
Likely pathogenic41
Uncertain significance277
Likely benign37
Benign17

Top pathogenic / likely-pathogenic (30)

Variant IDHGVSClassification
1180507GRCh37/hg19 16p13.11(chr16:14887031-16308753)x3Pathogenic
1341990GRCh37/hg19 16p13.11(chr16:15551302-16194578)x1Pathogenic
145996GRCh38/hg38 16p13.11(chr16:14716125-16383721)x1Pathogenic
146180GRCh38/hg38 16p13.11-12.3(chr16:15310595-18212997)x1Pathogenic
147644GRCh38/hg38 16p13.11-12.3(chr16:15060830-18535437)x3Pathogenic
148975GRCh38/hg38 16p13.11(chr16:14816259-16431491)x1Pathogenic
149045GRCh38/hg38 16p13.11(chr16:14783830-16234088)x1Pathogenic
149520GRCh38/hg38 16p13.11(chr16:14783830-16198378)x1Pathogenic
149523GRCh38/hg38 16p13.11(chr16:15398450-16198378)x1Pathogenic
149876GRCh38/hg38 16p13.11-12.3(chr16:15457205-18212984)x1Pathogenic
150612GRCh38/hg38 16p13.11(chr16:14954894-16198378)x1Pathogenic
150853GRCh38/hg38 16p13.11-12.3(chr16:15398450-18068310)x1Pathogenic
153310GRCh38/hg38 16p13.11(chr16:14802528-16236815)x1Pathogenic
153386GRCh38/hg38 16p13.11(chr16:14772427-16298053)x1Pathogenic
153547GRCh38/hg38 16p13.11(chr16:14805819-16420254)x1Pathogenic
153812GRCh38/hg38 16p13.11(chr16:15387890-16294387)x1Pathogenic
154123GRCh38/hg38 16p13.11(chr16:14956111-16202043)x1Pathogenic
154289GRCh38/hg38 16p13.11(chr16:14803768-16400926)x1Pathogenic
154376GRCh38/hg38 16p13.11(chr16:14874998-16034020)x1Pathogenic
154462GRCh38/hg38 16p13.11-12.3(chr16:15457445-18047194)x1Pathogenic
154755GRCh38/hg38 16p13.11(chr16:14816356-16648337)x1Pathogenic
154784GRCh38/hg38 16p13.11(chr16:14816356-16431517)x1Pathogenic
154958GRCh38/hg38 16p13.11(chr16:15398450-16268850)x1Pathogenic
155029GRCh38/hg38 16p13.11(chr16:14803931-16414182)x1Pathogenic
155163GRCh38/hg38 16p13.11(chr16:15355839-16294739)x1Pathogenic
160807GRCh38/hg38 16p13.11(chr16:14816348-16100721)x1Pathogenic
160930GRCh38/hg38 16p13.11(chr16:14816348-16431491)x1Pathogenic
1703611GRCh37/hg19 16p13.11(chr16:14899676-16516109)Pathogenic
1703612GRCh37/hg19 16p13.11(chr16:14897625-16494783)Pathogenic
1703613GRCh37/hg19 16p13.11(chr16:14897372-16513267)Pathogenic

SpliceAI

6199 predictions. Top by Δscore:

VariantEffectΔscore
16:15949798:GG:Gdonor_gain1.0000
16:15949799:GG:Gdonor_gain1.0000
16:15949800:G:GGdonor_gain1.0000
16:16007810:TCGCA:Tacceptor_loss1.0000
16:16007811:CGCAG:Cacceptor_loss1.0000
16:16007812:GCAGG:Gacceptor_loss1.0000
16:16007813:CAGGA:Cacceptor_loss1.0000
16:16007814:A:AGacceptor_gain1.0000
16:16007814:AG:Aacceptor_gain1.0000
16:16007814:AGGAC:Aacceptor_loss1.0000
16:16007815:G:GAacceptor_gain1.0000
16:16007815:G:Tacceptor_loss1.0000
16:16007815:GG:Gacceptor_gain1.0000
16:16007815:GGACT:Gacceptor_gain1.0000
16:16007988:AAACT:Adonor_gain1.0000
16:16007989:AACT:Adonor_gain1.0000
16:16007990:ACT:Adonor_gain1.0000
16:16007993:G:GGdonor_gain1.0000
16:16009900:TGGT:Tdonor_loss1.0000
16:16009901:GGT:Gdonor_loss1.0000
16:16009902:G:GGdonor_gain1.0000
16:16009902:G:Tdonor_loss1.0000
16:16009903:TAA:Tdonor_loss1.0000
16:16033169:GG:Gdonor_gain1.0000
16:16033170:GG:Gdonor_gain1.0000
16:16036600:GGAA:Gdonor_gain1.0000
16:16036601:GAA:Gdonor_gain1.0000
16:16036601:GAAG:Gdonor_gain1.0000
16:16036603:AG:Adonor_loss1.0000
16:16036604:G:Cdonor_loss1.0000

AlphaMissense

10047 scored. Top likely-pathogenic:

VariantProtein changeam_pathogenicity
16:16048200:T:CL426P0.999
16:16048256:T:AW445R0.999
16:16048256:T:CW445R0.999
16:16056120:G:CR501P0.999
16:16068253:T:CL592P0.999
16:16083396:T:AW716R0.999
16:16083396:T:CW716R0.999
16:16122081:G:CR1166P0.999
16:16134362:G:AG1327R0.999
16:16134362:G:CG1327R0.999
16:16134362:G:TG1327W0.999
16:16134363:G:AG1327E0.999
16:16134363:G:TG1327V0.999
16:16134374:G:CA1331P0.999
16:16134380:A:CK1333Q0.999
16:16134381:A:TK1333M0.999
16:16134508:G:CQ1375H0.999
16:16134508:G:TQ1375H0.999
16:16138390:T:CL1440P0.999
16:16138432:A:CD1454A0.999
16:16138432:A:TD1454V0.999
16:16138434:G:AE1455K0.999
16:16138435:A:CE1455A0.999
16:16138435:A:GE1455G0.999
16:16138435:A:TE1455V0.999
16:16138436:G:CE1455D0.999
16:16138436:G:TE1455D0.999
16:16138443:G:CA1458P0.999
16:16138525:C:AA1485D0.999
16:16138527:C:GH1486D0.999

dbSNP variants (sampled 300 via entrez): RS1000005772 (16:16052373 A>G), RS1000006657 (16:16017300 G>A), RS1000006910 (16:16141976 G>C), RS1000010834 (16:16079721 A>C,G), RS1000045156 (16:15993849 C>G,T), RS1000046042 (16:16109961 T>G), RS1000070382 (16:16123470 A>G), RS1000074669 (16:16093592 C>A), RS1000087051 (16:16004194 A>T), RS1000114508 (16:15964235 G>A,T), RS1000114966 (16:16003968 G>A), RS1000115441 (16:16058214 A>G,T), RS1000135407 (16:16103489 A>G), RS1000140722 (16:16137790 C>T), RS1000146481 (16:15970079 A>G)

Disease associations

OMIM: gene MIM:158343 | disease phenotypes: MIM:114480, MIM:619351, MIM:251450, MIM:209850, MIM:124900, MIM:264800, MIM:181500, MIM:193250, MIM:610543, MIM:618915

GenCC curated gene-disease

DiseaseClassificationInheritance
hearing loss, autosomal dominant 77ModerateAutosomal dominant
autosomal dominant nonsyndromic hearing lossSupportiveAutosomal dominant

ClinGen Gene-Disease Validity (1)

Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.

DiseaseClassificationInheritance
autosomal dominant nonsyndromic hearing lossLimitedAD

Mondo (16): hereditary breast carcinoma (MONDO:0016419), megacystis-microcolon-intestinal hypoperistalsis syndrome 2 (MONDO:0025708), Desbuquois dysplasia 1 (MONDO:0009629), autism (MONDO:0005260), hydrocephalus (MONDO:0001150), 16p13.11 microdeletion syndrome (MONDO:0016836), 16p13.11 microduplication syndrome (MONDO:0016837), autism spectrum disorder (MONDO:0005258), autosomal dominant nonsyndromic hearing loss (MONDO:0019587), autosomal recessive inherited pseudoxanthoma elasticum (MONDO:0009925), schizophrenia (MONDO:0005090), volvulus of midgut (MONDO:0008666), Rubinstein-Taybi syndrome due to 16p13.3 microdeletion (MONDO:0012519), hearing loss, autosomal dominant 77 (MONDO:0030058), epilepsy (MONDO:0005027)

Orphanet (13): Hereditary breast cancer (Orphanet:227535), Desbuquois syndrome (Orphanet:1425), 16p13.11 microdeletion syndrome (Orphanet:261236), 16p13.11 microduplication syndrome (Orphanet:261243), Rare autosomal dominant non-syndromic sensorineural deafness type DFNA (Orphanet:90635), Pseudoxanthoma elasticum (Orphanet:758), OBSOLETE: Familial intestinal malrotation-facial anomalies syndrome (Orphanet:2454), Familial intestinal malrotation (Orphanet:508410), Rubinstein-Taybi syndrome due to 16p13.3 microdeletion (Orphanet:353281), Rubinstein-Taybi syndrome (Orphanet:783), NON RARE IN EUROPE: Autism (Orphanet:106), NON RARE IN EUROPE: Schizophrenia (Orphanet:3140), NON RARE IN EUROPE: Unexplained intellectual disability (Orphanet:319658)

HPO phenotypes

5 total (7 of 5 shown, HPO-id order):

HPOTerm
HP:0000006Autosomal dominant inheritance
HP:0000360Tinnitus
HP:0000407Sensorineural hearing impairment
HP:0003581Adult onset
HP:0011390Abnormal inner ear morphology
HP:0000717Autism
HP:0100753Schizophrenia

GWAS associations

22 associations (top):

StudyTraitp-value
GCST003051_1Multiple myeloma (survival)7.000000e-09
GCST003225_26Pelvic organ prolapse (moderate/severe)3.000000e-07
GCST003261_1Ischemic stroke (undetermined subtype)5.000000e-11
GCST004068_52Venous thromboembolism adjusted for sickle cell variant rs77121243-T6.000000e-06
GCST004618_19White blood cell count (basophil)1.000000e-10
GCST004685_3Psychosis proneness (perceptual aberration scale)4.000000e-06
GCST008058_4Estimated glomerular filtration rate4.000000e-10
GCST009557_1Rate of ventricular enlargement9.000000e-06
GCST010579_5Response to antiepileptic mood-stabilizing treatment in bipolar disorder2.000000e-06
GCST012020_127Serum metabolite levels4.000000e-27
GCST012020_463Serum metabolite levels6.000000e-15
GCST90002379_74Basophil count1.000000e-15
GCST90002380_36Basophil percentage of white cells1.000000e-13
GCST90002390_80Mean corpuscular hemoglobin8.000000e-10
GCST90002391_75Mean corpuscular hemoglobin concentration3.000000e-09
GCST90002396_579Mean reticulocyte volume3.000000e-14
GCST90002396_580Mean reticulocyte volume2.000000e-11
GCST90002397_232Mean spheric corpuscular volume3.000000e-13
GCST90002397_233Mean spheric corpuscular volume6.000000e-11
GCST90002404_336Red cell distribution width3.000000e-11
GCST90020028_1491Hip circumference adjusted for BMI7.000000e-09
GCST90026412_11Severe autoimmune type 2 diabetes7.000000e-06

EFO canonical traits (10, from GWAS)

EFO IDTrait name
EFO:0000638overall survival
EFO:0005090basophil count
EFO:0008337psychosis predisposition measurement
EFO:0010570ventricular enlargement measurement
EFO:0007992basophil percentage of leukocytes
EFO:0004527mean corpuscular hemoglobin
EFO:0004528mean corpuscular hemoglobin concentration
EFO:0010701mean reticulocyte volume
EFO:0009188Red cell distribution width
EFO:0008039BMI-adjusted hip circumference

MeSH disease descriptors (7)

DescriptorNameTree numbers
D001321Autistic DisorderF03.625.164.113.500
D004827EpilepsyC10.228.140.490
D006849HydrocephalusC10.228.140.602
D008607Intellectual DisabilityC10.597.606.360; C23.888.592.604.646; F01.700.687; F03.625.539
D011561Pseudoxanthoma ElasticumC14.907.454.530; C15.378.463.515.530; C16.131.831.766; C16.320.850.750; C17.300.766; C17.800.804.766; C17.800.827.750
C562840Breast Cancer, Familial (supp.)
C562456Volvulus Of Midgut (supp.)

Drugs & pharmacology

Drug and pharmacology data

Is drug target: yes

ChEMBL targets (2): CHEMBL3004 (SINGLE PROTEIN), CHEMBL3430875 (SELECTIVITY GROUP)

Molecules with ChEMBL bioactivity

23 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 1,908,965 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).

MoleculeNamePhasePatents
CHEMBL111RIMONABANT415,726
CHEMBL159VINBLASTINE4412,636
CHEMBL160CYCLOSPORINE4168,247
CHEMBL178DAUNORUBICIN4203,756
CHEMBL308954ETRAVIRINE411,287
CHEMBL388590BENZBROMARONE48,245
CHEMBL494753ESTRONE SULFURIC ACID43,380
CHEMBL53463DOXORUBICIN4314,282
CHEMBL58MITOXANTRONE4166,878
CHEMBL6INDOMETHACIN4156,366
CHEMBL6067487IVERMECTIN4
CHEMBL6966VERAPAMIL475,097
CHEMBL90555VINCRISTINE4268,031
CHEMBL1086218VALSPODAR35,970
CHEMBL348475TARIQUIDAR33,984
CHEMBL50QUERCETIN374,559
CHEMBL197DEXVERAPAMIL215,079
CHEMBL2013174VEDROPREVIR2314
CHEMBL280481VERLUKAST22,491
CHEMBL350775BIRICODAR22,637
CHEMBL4567446CLESACOSTAT2
CHEMBL575448BMS-7548072
CHEMBL150KAEMPFEROL1

PharmGKB: 1 entry (VIP=true, CPIC=false)

PharmGKB clinical annotations

14 annotations.

VariantTypeLevelDrugsPhenotypes
rs119774Efficacy3montelukastAsthma
rs17501331Toxicity3irinotecanColorectal Neoplasms;Neutropenia
rs212091Efficacy3lamivudine;lopinavir;ritonavir;zidovudineHIV infectious disease
rs2238476Efficacy,Toxicity3methotrexatePsoriasis
rs246240Toxicity3methotrexateDrug Toxicity;Psoriasis
rs246240Efficacy3methotrexateRheumatoid arthritis
rs28364006Efficacy3methotrexatePsoriasis
rs35592Efficacy3methotrexatePsoriasis;Rheumatoid arthritis
rs35621Metabolism/PK3SN-38Colorectal Neoplasms
rs3743527Toxicity3irinotecanColorectal Neoplasms
rs3784864Efficacy3methotrexateRheumatoid arthritis
rs4148350Toxicity4anthracyclines and related substancesNeoplasms
rs45511401Toxicity3doxorubicinCardiac rhythm disease;Drug Toxicity;Non-Hodgkin Lymphoma
rs6498588Metabolism/PK3SN-38Colorectal Neoplasms

PharmGKB variants

45 variants.

VariantGenesLevelScore#Clin annotsDrugs
rs35592ABCC131.751methotrexate
rs35596ABCC10.000
rs119774ABCC132.251montelukast
rs212091ABCC132.251lamivudine;lopinavir;ritonavir;zidovudine
rs246221ABCC10.000
rs246240ABCC133.002methotrexate
rs903880ABCC10.000
rs2074087ABCC10.000
rs2238476ABCC134.501methotrexate
rs2889517ABCC10.000
rs3743527ABCC131.751irinotecan
rs3784862ABCC10.000
rs3784864ABCC132.501methotrexate
rs4148350ABCC14-1.751anthracyclines and related substances
rs4148354ABCC10.000
rs4148356ABCC10.000
rs4781712ABCC10.000
rs8058040ABCC10.000
rs11861115ABCC10.000
rs16967126ABCC10.000
rs17264736ABCC10.000
rs17287570ABCC10.000
rs28364006ABCC132.251methotrexate
rs35529209ABCC10.000
rs45511401ABCC133.251doxorubicin
rs1967120ABCC10.000
rs35621ABCC131.251SN-38
rs8187843ABCC10.000
rs215095ABCC10.000
rs212082ABCC10.000
rs17501331ABCC131.751irinotecan
rs212090ABCC10.000
rs35626ABCC10.000
rs152023ABCC10.000
rs11075291ABCC10.000
rs3784867ABCC10.000
rs17501011ABCC10.000
rs4148333ABCC10.000
rs4781701ABCC10.000
rs12934692ABCC10.000

GtoPdb / IUPHAR curated pharmacology

(IUPHAR/BPS Guide to Pharmacology — expert-curated)

Target class: transporter — ABCC subfamily

Most potent curated ligand interactions (3 total), top 3:

LigandActionAffinityParameter
WP814Inhibition7.15pKi
compound 14 [PMID: 30925062]Competitive5.3pIC50
biricodarInhibition5.29pIC50

Binding affinities (BindingDB)

779 measured of 805 human assays (817 total across all organisms); most potent 50 below. Values come from heterogeneous assays and are not directly comparable.

LigandMeasureValue
7-(difluoromethyl)-3-[(2-ethyl-1H-imidazol-1-yl)carbonyl]-5-(4-methylphenyl)pyrazolo[1,5-a]pyrimidineEC50523 nM
3-(phenylmethyl)-5-[1-(phenylsulfonyl)piperidin-3-yl]-2H-[1,2,3]triazolo[4,5-d]pyrimidin-7-oneEC50603 nM
MLS000696981EC50631 nM
2,3-Dihydro-benzo[1,4]dioxine-2-carboxylic acid [1-(2-hydroxy-3-methoxy-phenyl)-meth-(E)-ylidene-hydrazinocarbonylmethyl]-amideEC50637 nM
10H-pyrazino[2,3-b][1,4]benzothiazineEC50637 nM
2-(3,5-dimethyl-1-pyrazolyl)-N-[(4-methoxyphenyl)methylideneamino]-6-methyl-4-pyrimidinamineEC50656 nM
(3,5-Dimethyl-4-nitro-pyrazol-1-yl)-acetic acid [1-(2-hydroxy-3-methoxy-phenyl)-meth-(E)-ylidene]-hydrazideEC50673 nM
4-(1-oxoheptylamino)-N-(3-pyridinylmethylideneamino)benzamideEC50694 nM
Benzoic acid 4-bromo-2-[(5-methyl-2H-pyrazole-3-carbonyl)-hydrazonomethyl]-phenyl esterEC50808 nM
(4E)-4-[[2-[2-(3,5-dimethylpyrazol-1-yl)-6-methyl-pyrimidin-4-yl]hydrazinyl]methylidene]-3-oxidanyl-cyclohexa-2,5-dien-1-oneEC50831 nM
3-[N’-[(E)-(2-hydroxy-4-keto-cyclohexa-2,5-dien-1-ylidene)methyl]hydrazino]-6-veratryl-2H-1,2,4-triazin-5-oneEC50836 nM
2-(7-chloranyl-2-oxidanylidene-5-phenyl-3H-1,4-benzodiazepin-1-yl)-N-[4-(dimethylamino)phenyl]ethanamideIC50856 nM
1,3-dimethyl-8-[(2-methyl-1-piperidinyl)methyl]-7-pentylpurine-2,6-dioneEC50883 nM
(4-Benzhydryl-piperazin-1-yl)-(5-thiophen-2-yl-7-trifluoromethyl-pyrazolo[1,5-a]pyrimidin-3-yl)-methanoneEC50916 nM
2-[4-(5-chloranyl-2-methyl-phenyl)piperazin-1-yl]carbonyl-1,5-dimethyl-pyrrolo[3,2-c]quinolin-4-oneEC501000 nM
MLS000723318EC501010 nM
1-(2-Diethylamino-ethyl)-1-(6,8-dimethyl-2-oxo-1,2-dihydro-quinolin-3-ylmethyl)-3-furan-2-ylmethyl-thioureaEC501030 nM
2-N-benzyl-4-N-[(2-chlorophenyl)methylideneamino]-6-methylpyrimidine-2,4-diamineEC501080 nM
MLS000324799EC501090 nM
2-[[1-oxo-2-(1H-1,2,4-triazol-5-ylthio)ethyl]amino]-4-thiophen-2-yl-3-thiophenecarboxylic acid ethyl esterEC501090 nM
3-Amino-2-(4-methoxy-benzoyl)-4-(4-methoxycarbonyl-phenyl)-6-methyl-4,7-dihydro-thieno[2,3-b]pyridine-5-carboxylic acid ethyl esterEC501100 nM
1-[bis(4-morpholinyl)phosphoryl]-N’-(4-methoxyphenyl)-N-(4-nitroanilino)methanimidamideEC501120 nM
(Z)-3-(4-hydroxyanilino)-2-nitro-2-propenoic acid methyl esterEC501120 nM
8-[2-(4-Methoxy-phenyl)-5-phenyl-pyrazolo[1,5-a]pyrimidin-7-yl]-1,4-dioxa-8-aza-spiro[4.5]decaneEC501160 nM
1,6,6-triphenyl-3-(p-tolyl)-3-azabicyclo[3.1.0]hexane-2,4-quinoneEC501160 nM
2-[[3-(4-methoxyphenyl)-4-oxidanylidene-6,7-dihydrothieno[3,2-d]pyrimidin-2-yl]sulfanyl]-N-phenyl-ethanamideEC501180 nM
3-phenyl-N-(5-tetralin-6-yl-1,3,4-oxadiazol-2-yl)propionamideEC501360 nM
2-[(4-morpholin-4-yl-1,2,5-thiadiazol-3-yl)oxy]-N’-[(E)-(6-oxidanylidenecyclohexa-2,4-dien-1-ylidene)methyl]ethanehydrazideEC501390 nM
(6Z)-3-methoxy-6-[4-(1-phenyl-4-pyrazolyl)-1,2-dihydropyrazol-3-ylidene]-1-cyclohexa-2,4-dienoneEC501430 nM
1-[(5-bromanyl-2-oxidanylidene-indol-3-yl)amino]-3-(1,5-dimethyl-3-oxidanylidene-2-phenyl-pyrazol-4-yl)thioureaEC501480 nM
(3-bromanylimidazo[1,2-a]pyridin-2-yl)methyl carbamimidothioate;hydrobromideEC501490 nM
1-[oxo-[3-(1-pyrrolyl)-2-thiophenyl]methyl]-N-(4-phenylbutan-2-yl)-4-piperidinecarboxamideEC501500 nM
4-[4-(2,4-dimethoxyphenyl)-3-methyl-6-oxo-2,4-dihydropyrrolo[3,4-c]pyrazol-5-yl]benzoic acid ethyl esterEC501510 nM
6-chloranyl-2-[2-(2,5-dimethylpyrrol-1-yl)thiophen-3-yl]-5-methyl-1H-pyrazolo[1,5-a]pyrimidin-7-oneIC501530 nM
3-(3,5-Dimethyl-pyrazol-1-yl)-propionic acid [1-(2-hydroxy-phenyl)-meth-(E)-ylidene]-hydrazideEC501540 nM
(4E)-2-(1,3-thiazol-2-yl)-4-[(2,4,6-trimethylanilino)methylidene]isoquinoline-1,3-dioneEC501540 nM
MLS000545573EC501600 nM
4-(6-keto-2,4-dihydrothiazolo[3,2-a][1,3,5]triazin-3-yl)benzoic acid ethyl esterEC501600 nM
2-(cyanomethylsulfanyl)-6-ethoxy-quinoline-3-carbonitrileEC501620 nM
4-Amino-isothiazole-3,5-dicarboxylic acid 3-amide 5-{(2-ethoxy-phenyl)-[furan-2-yl-(3-methyl-butylcarbamoyl)-methyl]-amide}EC501620 nM
2-Cyclopropyl-4-[4-(4-fluoro-benzenesulfonyl)-piperazin-1-yl]-5,6-dimethyl-thieno[2,3-d]pyrimidineEC501630 nM
5-[4-(dimethylamino)phenyl]imino-1-(2-hydroxyethyl)-2,6-diketo-4-methyl-nicotinonitrileEC501630 nM
4-[(5Z)-4-keto-5-(4-methylbenzylidene)-2-thioxo-thiazolidin-3-yl]-N-thiazol-2-yl-butyramideEC501640 nM
4-(4-methyl-1-piperidinyl)-1-phenylpyrazolo[3,4-d]pyrimidineEC501650 nM
1,3-Dimethyl-8-morpholin-4-ylmethyl-7-phenethyl-3,7-dihydro-purine-2,6-dioneEC501680 nM
MLS000528647EC501700 nM
2-[2-[4-(2-hydroxy-3-phenoxy-propyl)piperazino]ethyl]benzo[de]isoquinoline-1,3-quinoneEC501710 nM
4,5-dimethyl-2-[[1-oxo-2-(1H-1,2,4-triazol-5-ylthio)ethyl]amino]-3-thiophenecarboxylic acid ethyl esterEC501740 nM
2-(3,5-Dimethyl-4-nitro-pyrazol-1-yl)-propionic acid [1-(2-hydroxy-3-methoxy-phenyl)-meth-(E)-ylidene]-hydrazideEC501770 nM
3-amino-6-(2-furanyl)-N-(2-methoxyphenyl)-2-thieno[2,3-b]pyridinecarboxamideIC501790 nM

ChEMBL bioactivities

550 potent at pChembl≥5 of 723 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).

pChemblTypeValueUnitMolecule
8.82IC501.5nMMITOXANTRONE
8.72IC501.9nMMITOXANTRONE
8.00IC5010nMCHEMBL28629
8.00IC5010nMCHEMBL281496
7.96IC5011nMCHEMBL26779
7.92IC5012nMCHEMBL26150
7.92IC5012nMCHEMBL25903
7.89IC5013nMCHEMBL25905
7.86IC5013.7nMCHEMBL29743
7.82IC5015nMCHEMBL281326
7.77IC5017nMCHEMBL418382
7.72IC5019nMCHEMBL284024
7.70IC5020nMCHEMBL283255
7.68IC5021nMCHEMBL27007
7.62IC5024nMCHEMBL26678
7.62IC5024nMCHEMBL430724
7.58IC5026.5nMCHEMBL29631
7.57IC5027nMCHEMBL283253
7.56IC5027.5nMMITOXANTRONE
7.55IC5028nMCHEMBL25731
7.54IC5029nMCHEMBL439727
7.48IC5033nMCHEMBL27007
7.46Kd35nMDEXVERAPAMIL
7.42IC5038nMCHEMBL200216
7.39IC5041nMCHEMBL27415
7.39IC5040.9nMCHEMBL285343
7.37IC5043nMCHEMBL27102
7.36IC5044nMCHEMBL430724
7.35IC5045nMCHEMBL27536
7.35IC5045nMCHEMBL286948
7.32IC5048nMCHEMBL26081
7.29IC5051nMCHEMBL25867
7.28EC5053nMCHEMBL4286793
7.23IC5059nMCHEMBL27257
7.23IC5059nMCHEMBL282156
7.22Ki60nMCHEMBL2074989
7.21IC5061nMCHEMBL26485
7.21IC5062nMCHEMBL26678
7.20IC5063nMCHEMBL284676
7.19IC5065nMCHEMBL283438
7.18IC5066nMCHEMBL5436972
7.17IC5067nMCHEMBL287400
7.16Ki70nMDAUNORUBICIN
7.15IC5071nMCHEMBL28629
7.14EC5073nMCHEMBL539987
7.12IC5076nMCHEMBL280981
7.11EC5078nMCHEMBL4282529
7.11IC5078nMCHEMBL26039
7.11IC5078nMCHEMBL27191
7.10IC5079nMVERAPAMIL

PubChem BioAssay actives

557 with measured affinity, of 2615 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.

CompoundAssayTypeValueUnit
Mitoxantrone681514: TP_TRANSPORTER: cell accumulation in MCF7/MRP1-M6 cellsic500.0015uM
6-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-8-methyl-4-(morpholin-4-ylmethyl)-3,5,8,10-tetrazatricyclo[7.4.0.02,7]trideca-1(13),2(7),3,5,9,11-hexaene-13-carboxamide106553: Inhibitory activity against MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell line in single-dose potentiation assayic500.0100uM
4-[6-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-8-methyl-3,5,8,12-tetrazatricyclo[7.4.0.02,7]trideca-1(9),2(7),3,5,10,12-hexaen-13-yl]morpholine106553: Inhibitory activity against MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell line in single-dose potentiation assayic500.0100uM
6-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-8,11-dimethyl-12-nitro-3,5,8,10-tetrazatricyclo[7.4.0.02,7]trideca-1(13),2(7),3,5,9,11-hexaene-13-carboxamide106553: Inhibitory activity against MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell line in single-dose potentiation assayic500.0110uM
6-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-8-methyl-3,5,8,10-tetrazatricyclo[7.4.0.02,7]trideca-1(13),2(7),3,5,9,11-hexaene-13-carboxamide106553: Inhibitory activity against MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell line in single-dose potentiation assayic500.0120uM
6-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-N,N,8-trimethyl-3,5,8,12-tetrazatricyclo[7.4.0.02,7]trideca-1(9),2(7),3,5,10,12-hexaen-13-amine106553: Inhibitory activity against MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell line in single-dose potentiation assayic500.0120uM
13-chloro-6-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-4-(methoxymethyl)-8-methyl-3,5,8,12-tetrazatricyclo[7.4.0.02,7]trideca-1(9),2(7),3,5,10,12-hexaene106553: Inhibitory activity against MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell line in single-dose potentiation assayic500.0130uM
4-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-9-nitro-5-(pyridin-4-ylmethyl)pyrimido[5,4-b]indole106553: Inhibitory activity against MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell line in single-dose potentiation assayic500.0137uM
6-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-8-methyl-N-(pyridin-2-ylmethyl)-3,5,8,12-tetrazatricyclo[7.4.0.02,7]trideca-1(9),2(7),3,5,10,12-hexaen-13-amine106553: Inhibitory activity against MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell line in single-dose potentiation assayic500.0150uM
4-[[13-chloro-6-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-8-methyl-3,5,8,12-tetrazatricyclo[7.4.0.02,7]trideca-1(9),2(7),3,5,10,12-hexaen-4-yl]methyl]morpholine106553: Inhibitory activity against MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell line in single-dose potentiation assayic500.0170uM
4-[[4-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-6,8-dinitro-5H-pyrimido[5,4-b]indol-2-yl]methyl]morpholine106553: Inhibitory activity against MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell line in single-dose potentiation assayic500.0190uM
4-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-5-(pyridin-4-ylmethyl)pyrimido[5,4-b]indole-9-carboxamide106553: Inhibitory activity against MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell line in single-dose potentiation assayic500.0200uM
6-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-8,13-dimethyl-3,5,8,12-tetrazatricyclo[7.4.0.02,7]trideca-1(9),2(7),3,5,10,12-hexaene106553: Inhibitory activity against MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell line in single-dose potentiation assayic500.0210uM
6-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-8-methyl-3,5,8,12-tetrazatricyclo[7.4.0.02,7]trideca-1(9),2(7),3,5,10,12-hexaene106553: Inhibitory activity against MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell line in single-dose potentiation assayic500.0240uM
4-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-5-methylpyrimido[5,4-b]indole-9-carboxamide106553: Inhibitory activity against MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell line in single-dose potentiation assayic500.0240uM
4-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-9-nitro-5-(pyridin-3-ylmethyl)pyrimido[5,4-b]indole106553: Inhibitory activity against MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell line in single-dose potentiation assayic500.0265uM
6-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-8-methyl-13-propan-2-yloxy-3,5,8,12-tetrazatricyclo[7.4.0.02,7]trideca-1(9),2(7),3,5,10,12-hexaene106553: Inhibitory activity against MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell line in single-dose potentiation assayic500.0270uM
6-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-N,8-dimethyl-3,5,8,12-tetrazatricyclo[7.4.0.02,7]trideca-1(9),2(7),3,5,10,12-hexaen-13-amine106553: Inhibitory activity against MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell line in single-dose potentiation assayic500.0280uM
4-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-5-methyl-2-(morpholin-4-ylmethyl)pyrimido[5,4-b]indole-9-carboxamide106553: Inhibitory activity against MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell line in single-dose potentiation assayic500.0290uM
(2R)-2-(3,4-dimethoxyphenyl)-5-[2-(3,4-dimethoxyphenyl)ethyl-methylamino]-2-propan-2-ylpentanenitrile360088: Binding activity to human MRP1 expressed in BHK21 cellskd0.0350uM
N-[[(1R,3S)-3-(9-chloro-3-methyl-4-oxo-[1,2]oxazolo[4,3-c]quinolin-5-yl)cyclohexyl]methyl]benzamide257276: Inhibitory activity against MRP1-mediated LTC4 uptake into membrane vesicles from HeLa-T5 cells expressing MRP1ic500.0380uM
4-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-9-nitro-5-(2-phenylethyl)pyrimido[5,4-b]indole106553: Inhibitory activity against MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell line in single-dose potentiation assayic500.0409uM
13-chloro-6-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-8-methyl-3,5,8,12-tetrazatricyclo[7.4.0.02,7]trideca-1(9),2(7),3,5,10,12-hexaene106553: Inhibitory activity against MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell line in single-dose potentiation assayic500.0410uM
4-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-N-[(2,3-dimethoxyphenyl)methyl]-6,7,8,9-tetrahydropyrimido[4,5-b]indolizine-10-carboxamide106552: Inhibitory activity against human transporter MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell lineic500.0430uM
6-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-8-methyl-3,5,8,10-tetrazatricyclo[7.4.0.02,7]trideca-1(13),2(7),3,5,9,11-hexaene-13-carbonitrile106553: Inhibitory activity against MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell line in single-dose potentiation assayic500.0450uM
ethyl 9-carbamoyl-4-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]pyrimido[5,4-b]indole-5-carboxylate106553: Inhibitory activity against MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell line in single-dose potentiation assayic500.0450uM
8-benzyl-6-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-3,5,8,12-tetrazatricyclo[7.4.0.02,7]trideca-1(9),2(7),3,5,10,12-hexaene106553: Inhibitory activity against MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell line in single-dose potentiation assayic500.0480uM
4-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-8-nitro-5H-pyrimido[5,4-b]indole106553: Inhibitory activity against MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell line in single-dose potentiation assayic500.0510uM
7-[2-[2-[4-[3-[4-(7-fluoro-4-oxochromen-2-yl)phenoxy]propyl]triazol-1-yl]ethoxy]ethoxy]-2-phenylchromen-4-one1414427: Inhibition of MRP1 in human 2008/MRP1 cells assessed as potentiation of doxorubicin-induced cytotoxicity by measuring reduction in cell survival after 5 days by MTS assayec500.0530uM
methyl 4-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-5H-pyrimido[5,4-b]indole-8-carboxylate106553: Inhibitory activity against MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell line in single-dose potentiation assayic500.0590uM
4-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-9-nitro-5H-pyrimido[5,4-b]indole106553: Inhibitory activity against MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell line in single-dose potentiation assayic500.0590uM
(2S)-2-amino-5-[[(2R)-1-(carboxymethylamino)-1-oxo-3-[2-oxo-2-[(2S,4S)-2,4,5,12-tetrahydroxy-7-methoxy-6,11-dioxo-3,4-dihydro-1H-tetracen-2-yl]ethyl]sulfanylpropan-2-yl]amino]-5-oxopentanoic acid679010: TP_TRANSPORTER: inhibition of LTC4 uptake in membrane vesicles from SR3A cellski0.0600uM
4-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-N-(pyridin-2-ylmethyl)-6,7,8,9-tetrahydropyrimido[4,5-b]indolizine-10-carboxamide106552: Inhibitory activity against human transporter MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell lineic500.0610uM
6-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-13-methoxy-8-methyl-3,5,8,12-tetrazatricyclo[7.4.0.02,7]trideca-1(9),2(7),3,5,10,12-hexaene106553: Inhibitory activity against MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell line in single-dose potentiation assayic500.0630uM
4-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-5H-pyrimido[5,4-b]indole-9-carboxamide106553: Inhibitory activity against MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell line in single-dose potentiation assayic500.0650uM
(2S)-N-[(3S,5R,8R,9R,10R,12R,13R,14R,17S)-12-hydroxy-17-[(2S,5R)-5-(2-hydroxypropan-2-yl)-2-methyloxolan-2-yl]-4,4,8,10,14-pentamethyl-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl]pyrrolidine-2-carboxamide1981530: Inhibition of ABCC1 (unknown origin) overexpressing human KBV cells mediated efflux assessed as adriamycin IC50 using adriamycin as substrate at 10 uMic500.0660uM
6-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-8,11-dimethyl-3,5,8,10-tetrazatricyclo[7.4.0.02,7]trideca-1(13),2(7),3,5,9,11-hexaene-13-carboxamide106553: Inhibitory activity against MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell line in single-dose potentiation assayic500.0670uM
Daunorubicin679010: TP_TRANSPORTER: inhibition of LTC4 uptake in membrane vesicles from SR3A cellski0.0700uM
6-methyl-2-[4-[2-[2-[2-[2-[2-[4-(6-methyl-4-oxochromen-2-yl)phenoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]phenyl]chromen-4-one1414427: Inhibition of MRP1 in human 2008/MRP1 cells assessed as potentiation of doxorubicin-induced cytotoxicity by measuring reduction in cell survival after 5 days by MTS assayec500.0730uM
4-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-N-pyridin-3-yl-6,7,8,9-tetrahydropyrimido[4,5-b]indolizine-10-carboxamide106552: Inhibitory activity against human transporter MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell lineic500.0760uM
ethyl 2-[4-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-8-nitropyrimido[5,4-b]indol-5-yl]acetate106553: Inhibitory activity against MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell line in single-dose potentiation assayic500.0780uM
4-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-8-methoxy-9-nitro-5H-pyrimido[5,4-b]indole106551: In vitro inhibitory activity against MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell line in accumulation assayic500.0780uM
7-[2-[benzyl-[[1-[2-[2-[4-(4-oxochromen-2-yl)phenoxy]ethoxy]ethyl]triazol-4-yl]methyl]amino]ethoxy]-2-phenylchromen-4-one1414427: Inhibition of MRP1 in human 2008/MRP1 cells assessed as potentiation of doxorubicin-induced cytotoxicity by measuring reduction in cell survival after 5 days by MTS assayec500.0780uM
Verapamil1981530: Inhibition of ABCC1 (unknown origin) overexpressing human KBV cells mediated efflux assessed as adriamycin IC50 using adriamycin as substrate at 10 uMic500.0790uM
11-chloro-6-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-8-methyl-3,5,8,12-tetrazatricyclo[7.4.0.02,7]trideca-1(13),2(7),3,5,9,11-hexaene106553: Inhibitory activity against MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell line in single-dose potentiation assayic500.0870uM
7-[4-[1-[2-[2-[4-(4-oxochromen-2-yl)phenoxy]ethoxy]ethyl]triazol-4-yl]butoxy]-2-phenylchromen-4-one1414427: Inhibition of MRP1 in human 2008/MRP1 cells assessed as potentiation of doxorubicin-induced cytotoxicity by measuring reduction in cell survival after 5 days by MTS assayec500.0870uM
6-[4-[2-(3,4-difluorophenyl)ethyl]piperazin-1-yl]-8-methyl-3,5,8,13-tetrazatricyclo[7.4.0.02,7]trideca-1(9),2(7),3,5,10,12-hexaene106553: Inhibitory activity against MRP1 (Multidrug resistance associated protein 1) expressed in COR.L23/R cell line in single-dose potentiation assayic500.0940uM
7-[3-[1-[2-[2-[2-[4-(6-fluoro-4-oxochromen-2-yl)phenoxy]ethoxy]ethoxy]ethyl]triazol-4-yl]propoxy]-2-phenylchromen-4-one1414427: Inhibition of MRP1 in human 2008/MRP1 cells assessed as potentiation of doxorubicin-induced cytotoxicity by measuring reduction in cell survival after 5 days by MTS assayec500.0950uM
7-[2-[benzyl-[[1-[2-[2-[2-[4-(4-oxochromen-2-yl)phenoxy]ethoxy]ethoxy]ethyl]triazol-4-yl]methyl]amino]ethoxy]-2-phenylchromen-4-one1414427: Inhibition of MRP1 in human 2008/MRP1 cells assessed as potentiation of doxorubicin-induced cytotoxicity by measuring reduction in cell survival after 5 days by MTS assayec500.0990uM
7-fluoro-2-[4-[3-[1-[2-[2-[2-[4-(6-fluoro-4-oxochromen-2-yl)phenoxy]ethoxy]ethoxy]ethyl]triazol-4-yl]propoxy]phenyl]chromen-4-one1414427: Inhibition of MRP1 in human 2008/MRP1 cells assessed as potentiation of doxorubicin-induced cytotoxicity by measuring reduction in cell survival after 5 days by MTS assayec500.1030uM

CTD chemical–gene interactions

305 total (human), top 30 by PubMed support.

ChemicalActions (top 5)PubMed papers
Doxorubicinincreases reaction, decreases reaction, affects reaction, affects activity, increases uptake (+9 more)33
verlukastincreases export, increases expression, increases activity, increases response to substance, increases abundance (+11 more)22
Vincristinedecreases response to substance, affects transport, decreases reaction, affects expression, increases transport (+5 more)19
Glutathioneaffects binding, increases activity, decreases degradation, affects cotreatment, decreases response to substance (+15 more)16
Daunorubicinaffects response to substance, affects export, decreases response to substance, increases export, increases secretion (+4 more)12
Arsenic Trioxideincreases response to substance, decreases response to substance, decreases uptake, increases secretion, decreases expression (+4 more)11
Adenosine Triphosphateaffects folding, increases reaction, increases degradation, affects activity, increases transport (+5 more)11
Etoposideaffects expression, affects export, affects response to substance, decreases response to substance, affects cotreatment (+2 more)11
Indomethacinincreases response to substance, increases transport, affects export, decreases reaction, decreases response to substance (+6 more)11
Quercetinincreases activity, increases hydrolysis, affects export, increases expression, decreases response to substance (+10 more)11
Cisplatindecreases response to substance, affects cotreatment, increases expression, increases response to substance, decreases expression (+2 more)9
Probeneciddecreases reaction, increases export, decreases activity, decreases export, affects activity (+2 more)9
Verapamilaffects activity, decreases reaction, increases export, increases uptake, decreases activity (+4 more)9
sodium arsenitedecreases response to substance, affects binding, increases reaction, increases abundance, increases expression (+1 more)8
Leukotriene C4affects transport, decreases transport, increases uptake, decreases reaction, affects reaction (+4 more)8
Methotrexateaffects transport, increases transport, decreases response to substance, increases export, decreases expression (+2 more)7
fluorexonaffects export, increases export, affects activity, decreases reaction, affects transport (+3 more)6
estradiol-17 beta-glucuronideincreases reaction, affects binding, affects cotreatment, affects reaction, affects transport (+4 more)6
Epirubicinincreases expression, affects cotreatment, affects response to substance, decreases response to substance, decreases reaction6
Acetaminophenincreases transport, affects cotreatment, increases activity, increases expression, affects activity5
Antimony Potassium Tartrateaffects reaction, affects expression, decreases reaction, affects response to substance, decreases response to substance (+1 more)5
Genisteinaffects reaction, increases uptake, decreases activity, increases reaction, affects activity5
arseniteincreases transport, decreases reaction, decreases abundance, affects cotreatment, affects transport (+1 more)4
calcein AMdecreases activity, increases export, increases expression, decreases reaction, decreases export (+2 more)4
Resveratrolaffects cotreatment, decreases expression, increases uptake, increases hydrolysis, increases reaction (+3 more)4
Acetylcysteinedecreases expression, decreases reaction, increases expression, decreases response to substance, increases reaction4
Arsenicaffects expression, increases activity, increases expression, affects cotreatment, increases abundance (+1 more)4
Benzbromaronedecreases reaction, increases export, increases secretion, affects activity4
Benzo(a)pyreneincreases methylation, affects methylation, increases expression4
Chlorambucilaffects export, decreases response to substance, increases response to substance, increases reaction4

ChEMBL screening assays

459 unique, capped per target: 270 binding, 166 functional, 23 admet

Representative assays (with source publication via chembl_document):

Assay IDTypeDescriptionSource paper
CHEMBL1004849BindingInhibition of human MRP1 in hamster BHK21 cells assessed as increase in calcein-AM accumulation at 30 uM(R)- and (S)-verapamil differentially modulate the multidrug-resistant protein MRP1. — J Biol Chem
CHEMBL2013262ADMETInhibition of MRP1Discovery of GS-9451: an acid inhibitor of the hepatitis C virus NS3/4A protease. — Bioorg Med Chem Lett
CHEMBL2075050FunctionalTP_TRANSPORTER: drug resistance in MRP1-expressing NIH/3T3 cellsThe multidrug resistance-associated protein 1 transports methoxychlor and protects the seminiferous epithelium from injury. — Toxicol Lett

Cellosaurus cell lines

21 cell lines: 11 cancer cell line, 5 spontaneously immortalized cell line, 5 transformed cell line

First 10 cell lines (id-ordered, not curated):

CellosaurusNameCategorySex
CVCL_0E38MV522/MRPCancer cell lineFemale
CVCL_A5BCSW1573/S1(MRP)Cancer cell lineFemale
CVCL_B1EGAbcam A-549 ABCC1 KOCancer cell lineMale
CVCL_B1IKAbcam HeLa ABCC1 KOCancer cell lineFemale
CVCL_B5ZYC2BBe1 MRP1 KOCancer cell lineMale
CVCL_B8AQAbcam HCT 116 ABCC1 KOCancer cell lineMale
CVCL_B8S1Abcam MCF-7 ABCC1 KOCancer cell lineFemale
CVCL_E1JDHyCyte Bewo KO-hABCC1Cancer cell lineMale
CVCL_E5ZGCHO-K1 MRP1/ABCC1 WTSpontaneously immortalized cell lineFemale
CVCL_E5ZHCHO-K1 MRP1/ABCC1 Arg1058GlnSpontaneously immortalized cell lineFemale

Clinical trials (associated diseases)

300 trials via MONDO — disease-level, not drug-specific.

TrialPhaseStatusTitle
NCT00211796PHASE4COMPLETEDDivalproex Sodium ER in Adult Autism
NCT00391261PHASE4COMPLETEDAn Open-label Trial of Metformin for Weight Control of Pediatric Patients on Antipsychotic Medications.
NCT00409747PHASE4COMPLETEDMinocycline to Treat Childhood Regressive Autism
NCT00576732PHASE4COMPLETEDA Study of the Effectiveness and Safety of Two Doses of Risperidone in the Treatment of Children and Adolescents With Autistic Disorder
NCT00844753PHASE4COMPLETEDAtomoxetine, Placebo and Parent Management Training in Autism
NCT01028820PHASE4COMPLETEDFMRI Brain Activation of Aripiprazole Treatment in Autism Spectrum Disorders
NCT01098383PHASE4UNKNOWNTreatment With Acetyl-Choline Esterase Inhibitors in Children With Autism Spectrum Disorders
NCT01333865PHASE4COMPLETEDA Study of Memantine Hydrochloride (Namenda®) for Cognitive and Behavioral Impairment in Adults With Autism Spectrum Disorders
NCT01337700PHASE4COMPLETEDMilnacipran in Autism and the Functional Locus Coeruleus and Noradrenergic Model of Autism
NCT01695200PHASE4COMPLETEDOmega-3 Fatty Acids in Autism Spectrum Disorders
NCT02069977PHASE4UNKNOWNStudy to Evaluate the Efficacy and Safety of Aripiprazole
NCT02096952PHASE4COMPLETEDMethylphenidate ER Liquid Formulation in Adults With ASD and ADHD
NCT02199925PHASE4UNKNOWNAn Open-Label Study to Evaluate the Efficacy of High-Dose Gammaplex in Children on the Autism Spectrum
NCT02235467PHASE4COMPLETEDMultisite Study: Parental Training Using Video Modelling to Develop Social Skills in Children With Autism
NCT02255565PHASE4COMPLETEDDose Response Effects of Quillivant XR in Children With ADHD and Autism: A Pilot Study
NCT02940574PHASE4COMPLETEDNeural and Behavioral Effects of Oxytocin in Autism Spectrum Disorders
NCT03333629PHASE4COMPLETEDPromoting Positive Outcomes for Individuals With ASD: Linking Early Detection, Treatment, and Long-term Outcomes
NCT03337646PHASE4COMPLETEDEvaluation of the Effect and Safety of Lisdexamfetamine in Children Aged 6-12 With ADHD and Autism
NCT03538431PHASE4COMPLETEDImproving Driving in Young People With Autism Spectrum Disorders
NCT03757585PHASE4COMPLETEDNatural Treatments for the Management of Emotional Dysregulation in Youth With Non-verbal Learning Disability (NVLD) and/or Autism Spectrum Disorders (ASD)
NCT04903353PHASE4COMPLETEDPragmatic Trial Comparing Weight Gain in Children With Autism Taking Risperidone Versus Aripiprazole
NCT05063656PHASE4COMPLETEDBiomarker-Driven Pharmacological Treatment of Adolescents With Autism Spectrum Disorder With Gabapentin
NCT05146245PHASE4UNKNOWNSafety and Pharmacokinetics of Antipsychotics in Children 2: Studying TDM in an RCT
NCT05916339PHASE4RECRUITINGAWARE: Management of ADHD in Autism Spectrum Disorder
NCT05954052PHASE4TERMINATEDA Study of Glutathione in Children With Autism Spectrum Disorder
NCT06853665PHASE4RECRUITINGThe TEAM Study - Treatment Efficacy for Autism/Attention Using Mixed Amphetamine
NCT07054697PHASE4COMPLETEDPilot-RCT With Individualized Homeopathic Treatment in the Children With Autism Spectrum Disorder
NCT07161804PHASE4COMPLETEDPilot RCT Using Homeopathic Medicines in ASD
NCT07439042PHASE4NOT_YET_RECRUITINGBuspirone for Anxiety in Autistic Youth
NCT00036231PHASE3TERMINATEDSynthetic Human Secretin in Children With Autism and Gastrointestinal Dysfunction
NCT00036244PHASE3COMPLETEDSynthetic Human Secretin in Children With Autism
NCT00065884PHASE3UNKNOWNValproate Response in Aggressive Autistic Adolescents
NCT00065962PHASE3COMPLETEDSecretin for the Treatment of Autism
NCT00252603PHASE3COMPLETEDGalantamine Versus Placebo in Childhood Autism
NCT00346736PHASE3COMPLETEDUse of Acupuncture In Children With Autistic Spectrum Disorder
NCT00352248PHASE3COMPLETEDRandomized Controlled Trial of Acupuncture Versus Sham Acupuncture in Autistic Spectrum Disorder
NCT00352352PHASE3COMPLETEDUse of Acupuncture In Children With Autistic Spectrum Disorder
NCT00355329PHASE3COMPLETEDRandomized Control Trial of Using Tongue Acupuncture in Autistic Spectrum Disorder Using PET Scan for Clinical Correlation
NCT00498173PHASE3COMPLETEDEffectiveness of Atomoxetine in Treating ADHD Symptoms in Children and Adolescents With Autism
NCT00541346PHASE3COMPLETEDA Pilot Study of Daytrana TM in Children With Autism Co-Morbid for Attention Deficit Hyperactivity Disorder (ADHD) Symptoms