ABCC2
gene geneOn this page
Also known as DJSMRP2cMRP
Summary
ABCC2 (ATP binding cassette subfamily C member 2, HGNC:53) is a protein-coding gene on chromosome 10q24.2, encoding ATP-binding cassette sub-family C member 2 (Q92887). ATP-dependent transporter of the ATP-binding cassette (ABC) family that hydrolyzes ATP to enable active transport of endogenous and xenobiotic substrates conjugated with glucuronate, glutathione or sulfate.
The protein encoded by this gene is a member of the superfamily of ATP-binding cassette (ABC) transporters. ABC proteins transport various molecules across extra- and intra-cellular membranes. ABC genes are divided into seven distinct subfamilies (ABC1, MDR/TAP, MRP, ALD, OABP, GCN20, White). This protein is a member of the MRP subfamily which is involved in multi-drug resistance. This protein is expressed in the canalicular (apical) part of the hepatocyte and functions in biliary transport. Substrates include anticancer drugs such as vinblastine; therefore, this protein appears to contribute to drug resistance in mammalian cells. Several different mutations in this gene have been observed in patients with Dubin-Johnson syndrome (DJS), an autosomal recessive disorder characterized by conjugated hyperbilirubinemia.
Source: NCBI Gene 1244 — RefSeq curated summary.
At a glance
- Gene–disease (curated): Dubin-Johnson syndrome (Strong, GenCC)
- GWAS associations: 7
- Clinical variants (ClinVar): 1,337 total — 132 pathogenic, 58 likely-pathogenic (top 2% of genes corpus-wide)
- GTEx eGene: eQTL in 29 tissues, sQTL in 1 (q < 0.05)
- Phenotypes (HPO): 12
- ChEMBL bioactivity: 35 clinical-phase molecules tested; no curated mechanism-of-action drug
- Constraint (gnomAD): pLI 0.00 (LoF-tolerant), LOEUF 0.98 (unconstrained)
- MANE Select transcript:
NM_000392
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:53 |
| Approved symbol | ABCC2 |
| Name | ATP binding cassette subfamily C member 2 |
| Location | 10q24.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | DJS, MRP2, cMRP |
| Ensembl gene | ENSG00000023839 |
| Ensembl biotype | protein_coding |
| OMIM | 601107 |
| Entrez | 1244 |
Gene structure
Transcript identifiers
Ensembl transcripts: 14 — 8 nonsense_mediated_decay, 2 retained_intron, 2 protein_coding_CDS_not_defined, 2 protein_coding
MANE Select: ENST00000647814
Transcript support level (Ensembl TSL; 1 = fully mRNA-supported): TSL 2: 2
ENST00000647814, ENST00000370434, ENST00000496621, ENST00000647836, ENST00000648324, ENST00000648523, ENST00000648689, ENST00000649459, ENST00000649493, ENST00000649932, ENST00001001529, ENST00001001530, ENST00001001531, ENST00001001532
RefSeq mRNA: 1 — MANE Select: NM_000392
NM_000392
CCDS: CCDS7484
Canonical transcript exons
ENST00000647814 — 32 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000502459 | 99800386 | 99800563 |
| ENSE00000502462 | 99807384 | 99807521 |
| ENSE00000719698 | 99784608 | 99784781 |
| ENSE00000719702 | 99792234 | 99792359 |
| ENSE00000719714 | 99794413 | 99794468 |
| ENSE00000719718 | 99797097 | 99797331 |
| ENSE00000719721 | 99799207 | 99799370 |
| ENSE00000719753 | 99804019 | 99804273 |
| ENSE00000719768 | 99805382 | 99805447 |
| ENSE00000719782 | 99808083 | 99808229 |
| ENSE00000719787 | 99810134 | 99810218 |
| ENSE00000719801 | 99811536 | 99811602 |
| ENSE00000719839 | 99813018 | 99813144 |
| ENSE00000719856 | 99817308 | 99817484 |
| ENSE00000719906 | 99818790 | 99818957 |
| ENSE00000719916 | 99819089 | 99819269 |
| ENSE00000719930 | 99830307 | 99830433 |
| ENSE00000719954 | 99830716 | 99830851 |
| ENSE00000719985 | 99831611 | 99831830 |
| ENSE00000720031 | 99831977 | 99832131 |
| ENSE00000720045 | 99834380 | 99834535 |
| ENSE00000720151 | 99843799 | 99843900 |
| ENSE00000720167 | 99844322 | 99844465 |
| ENSE00000720218 | 99845624 | 99845782 |
| ENSE00000720232 | 99846961 | 99847127 |
| ENSE00000720285 | 99850602 | 99850796 |
| ENSE00001121971 | 99841967 | 99842093 |
| ENSE00001121978 | 99836091 | 99836290 |
| ENSE00003519551 | 99793551 | 99793685 |
| ENSE00003599605 | 99793892 | 99793999 |
| ENSE00003833855 | 99782640 | 99782877 |
| ENSE00003841175 | 99851502 | 99852594 |
Expression profiles
Bgee: expression breadth ubiquitous, 171 present calls, max score 97.47.
FANTOM5 (CAGE): breadth broad, TPM avg 3.1050 / max 274.9904, expressed in 282 samples.
Highest expression (Bgee): lobe of liver, liver, jejunal mucosa, gall bladder, duodenum.
Genetic regulation across tissues (GTEx eQTL / sQTL)
ABCC2 is an eGene in GTEx v10 — its expression is genetically regulated (eQTL) in 29 tissues and its splicing (sQTL) in 1 (q < 0.05). Strongest associations first; slope = normalized effect of the lead variant’s alternative allele.
showing 20 of 30 significant tissue × QTL associations:
| Tissue | QTL | q-value | Slope | Lead variant |
|---|---|---|---|---|
| Liver | sqtl | 9.4e-12 | -1.22 | 10:99819413:CTG:C |
| Testis | eqtl | 6.8e-10 | -0.29 | 10:99676961:G:A |
| Lung | eqtl | 2.8e-06 | +0.23 | 10:99761926:G:A |
| Whole Blood | eqtl | 5.9e-06 | -0.12 | 10:99762170:G:C |
| Brain Cerebellum | eqtl | 1.4e-05 | -0.53 | 10:99698196:C:T |
| Esophagus Mucosa | eqtl | 1.8e-05 | -0.20 | 10:99867528:G:T |
| Cells EBV-transformed lymphocytes | eqtl | 3.8e-05 | +0.36 | 10:99755559:T:C |
| Breast Mammary Tissue | eqtl | 8.5e-05 | -0.25 | 10:99613972:C:T |
| Artery Aorta | eqtl | 1.4e-04 | +0.20 | 10:99832563:A:G |
| Skin Sun Exposed Lower leg | eqtl | 2.1e-04 | +0.17 | 10:99829453:A:AT |
| Esophagus Muscularis | eqtl | 2.5e-04 | -0.17 | 10:99998104:G:A |
| Adipose Subcutaneous | eqtl | 2.6e-04 | -0.23 | 10:99613972:C:T |
| Colon Transverse | eqtl | 4.4e-04 | -0.18 | 10:99798989:G:T |
| Thyroid | eqtl | 5.1e-04 | -0.19 | 10:99638682:A:G |
| Esophagus Gastroesophageal Junction | eqtl | 1.1e-03 | +0.17 | 10:99826621:T:G |
| Colon Sigmoid | eqtl | 1.9e-03 | -0.19 | 10:99762170:G:C |
| Brain Hippocampus | eqtl | 2.1e-03 | +0.42 | 10:99634432:A:AATAG |
| Brain Cerebellar Hemisphere | eqtl | 6.7e-03 | -0.25 | 10:99782821:C:T |
| Spleen | eqtl | 7.6e-03 | -0.22 | 10:99798989:G:T |
| Artery Coronary | eqtl | 8.1e-03 | -0.41 | 10:99943051:G:T |
FANTOM5 promoters
8 alternative TSS:
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 106505 | 1.1699 | 100 |
| 106501 | 1.0755 | 141 |
| 106504 | 0.2929 | 84 |
| 106508 | 0.1736 | 60 |
| 106503 | 0.1718 | 65 |
| 106506 | 0.1387 | 46 |
| 106502 | 0.0431 | 25 |
| 106507 | 0.0395 | 21 |
Top tissues by expression
showing 100 of 286 tissues by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| right lobe of liver | UBERON:0001114 | 97.47 | gold quality |
| liver | UBERON:0002107 | 93.84 | gold quality |
| jejunal mucosa | UBERON:0000399 | 92.98 | gold quality |
| gall bladder | UBERON:0002110 | 90.00 | gold quality |
| duodenum | UBERON:0002114 | 89.62 | gold quality |
| adult mammalian kidney | UBERON:0000082 | 80.63 | gold quality |
| ileal mucosa | UBERON:0000331 | 78.38 | gold quality |
| small intestine | UBERON:0002108 | 77.78 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 77.20 | gold quality |
| small intestine Peyer’s patch | UBERON:0003454 | 77.19 | gold quality |
| tibial nerve | UBERON:0001323 | 77.06 | gold quality |
| jejunum | UBERON:0002115 | 76.46 | gold quality |
| metanephros cortex | UBERON:0010533 | 74.55 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 74.05 | gold quality |
| kidney | UBERON:0002113 | 74.01 | gold quality |
| sural nerve | UBERON:0015488 | 71.96 | gold quality |
| subcutaneous adipose tissue | UBERON:0002190 | 69.96 | gold quality |
| diaphragm | UBERON:0001103 | 69.93 | gold quality |
| cortex of kidney | UBERON:0001225 | 69.25 | gold quality |
| mucosa of stomach | UBERON:0001199 | 68.05 | gold quality |
| popliteal artery | UBERON:0002250 | 67.41 | gold quality |
| tibial artery | UBERON:0007610 | 67.40 | gold quality |
| gastrocnemius | UBERON:0001388 | 67.23 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 67.04 | gold quality |
| muscle of leg | UBERON:0001383 | 66.79 | gold quality |
| omental fat pad | UBERON:0010414 | 66.36 | gold quality |
| nephron tubule | UBERON:0001231 | 66.34 | silver quality |
| peritoneum | UBERON:0002358 | 66.29 | gold quality |
| tongue squamous epithelium | UBERON:0006919 | 66.25 | gold quality |
| granulocyte | CL:0000094 | 65.91 | gold quality |
| skin of leg | UBERON:0001511 | 65.67 | gold quality |
| metanephros | UBERON:0000081 | 65.18 | gold quality |
| adipose tissue of abdominal region | UBERON:0007808 | 65.07 | gold quality |
| spleen | UBERON:0002106 | 64.92 | gold quality |
| body of pancreas | UBERON:0001150 | 64.77 | gold quality |
| muscle organ | UBERON:0001630 | 64.49 | gold quality |
| blood | UBERON:0000178 | 64.12 | gold quality |
| ventricular zone | UBERON:0003053 | 63.98 | gold quality |
| islet of Langerhans | UBERON:0000006 | 63.73 | gold quality |
| pancreas | UBERON:0001264 | 63.55 | gold quality |
| aorta | UBERON:0000947 | 63.44 | gold quality |
| leukocyte | CL:0000738 | 63.38 | gold quality |
| monocyte | CL:0000576 | 63.33 | gold quality |
| mononuclear cell | CL:0000842 | 63.21 | gold quality |
| bone marrow cell | CL:0002092 | 63.19 | silver quality |
| skin of abdomen | UBERON:0001416 | 63.17 | gold quality |
| adipose tissue | UBERON:0001013 | 62.74 | gold quality |
| left uterine tube | UBERON:0001303 | 62.70 | gold quality |
| intestine | UBERON:0000160 | 62.45 | gold quality |
| esophagogastric junction muscularis propria | UBERON:0035841 | 62.31 | gold quality |
| connective tissue | UBERON:0002384 | 62.17 | gold quality |
| triceps brachii | UBERON:0001509 | 62.12 | gold quality |
| calcaneal tendon | UBERON:0003701 | 62.01 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 61.91 | gold quality |
| body of stomach | UBERON:0001161 | 61.85 | gold quality |
| zone of skin | UBERON:0000014 | 61.72 | gold quality |
| lymph node | UBERON:0000029 | 61.45 | gold quality |
| left adrenal gland cortex | UBERON:0035825 | 61.30 | gold quality |
| lower esophagus muscularis layer | UBERON:0035833 | 61.21 | gold quality |
| vermiform appendix | UBERON:0001154 | 61.17 | gold quality |
| lower esophagus | UBERON:0013473 | 61.14 | gold quality |
| bone marrow | UBERON:0002371 | 61.13 | gold quality |
| olfactory bulb | UBERON:0002264 | 60.94 | gold quality |
| type B pancreatic cell | CL:0000169 | 60.68 | gold quality |
| skeletal muscle tissue | UBERON:0001134 | 60.55 | gold quality |
| left adrenal gland | UBERON:0001234 | 60.52 | gold quality |
| ganglionic eminence | UBERON:0004023 | 60.47 | gold quality |
| left coronary artery | UBERON:0001626 | 60.44 | gold quality |
| right adrenal gland cortex | UBERON:0035827 | 60.14 | gold quality |
| right uterine tube | UBERON:0001302 | 59.90 | gold quality |
| fundus of stomach | UBERON:0001160 | 59.87 | gold quality |
| coronary artery | UBERON:0001621 | 59.86 | gold quality |
| stomach | UBERON:0000945 | 59.72 | gold quality |
| caecum | UBERON:0001153 | 59.70 | gold quality |
| gluteal muscle | UBERON:0002000 | 59.68 | gold quality |
| transverse colon | UBERON:0001157 | 59.60 | gold quality |
| adrenal cortex | UBERON:0001235 | 59.60 | gold quality |
| urinary bladder | UBERON:0001255 | 59.48 | gold quality |
| stromal cell of endometrium | CL:0002255 | 59.36 | gold quality |
| adrenal gland | UBERON:0002369 | 59.30 | gold quality |
| muscle tissue | UBERON:0002385 | 59.26 | gold quality |
| right adrenal gland | UBERON:0001233 | 59.24 | gold quality |
| right coronary artery | UBERON:0001625 | 59.24 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 59.21 | gold quality |
| rectum | UBERON:0001052 | 59.20 | gold quality |
| minor salivary gland | UBERON:0001830 | 59.17 | gold quality |
| descending thoracic aorta | UBERON:0002345 | 59.13 | gold quality |
| muscle layer of sigmoid colon | UBERON:0035805 | 59.09 | gold quality |
| right lung | UBERON:0002167 | 59.00 | gold quality |
| epithelium of bronchus | UBERON:0002031 | 58.59 | silver quality |
| bronchial epithelial cell | CL:0002328 | 58.46 | silver quality |
| thoracic aorta | UBERON:0001515 | 58.33 | gold quality |
| right lobe of thyroid gland | UBERON:0001119 | 58.32 | gold quality |
| ascending aorta | UBERON:0001496 | 58.31 | gold quality |
| esophagus | UBERON:0001043 | 58.29 | gold quality |
| adrenal tissue | UBERON:0018303 | 58.07 | gold quality |
| anatomical system | UBERON:0000467 | 57.93 | gold quality |
| bronchus | UBERON:0002185 | 57.93 | silver quality |
| material anatomical entity | UBERON:0000465 | 57.76 | gold quality |
| multicellular organism | UBERON:0000468 | 57.76 | gold quality |
Single-cell (SCXA)
Detected in 3 experiment(s), a significant marker in 3.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-GEOD-130473 | yes | 343.20 |
| E-MTAB-6819 | yes | 156.38 |
| E-ANND-3 | yes | 6.53 |
HPA expression
RNA tissue specificity: Tissue enhanced
showing 60 of 73 HPA tissues / cells by nTPM:
| Tissue / cell | Axis | nTPM | Protein (IHC) |
|---|---|---|---|
| Liver | tissue | 113.8 | high |
| Small intestine | tissue | 37.9 | medium |
| Duodenum | tissue | 36.8 | medium |
| Gallbladder | tissue | 23.0 | medium |
| Kidney | tissue | 17.3 | high |
| Retina | tissue | 3.6 | |
| Breast | tissue | 2.9 | not detected |
| Cerebellum | tissue | 1.7 | not detected |
| Skin 1 | tissue | 1.6 | not detected |
| Olfactory bulb | tissue | 1.5 | |
| Amygdala | tissue | 1.4 | |
| Corpus callosum | tissue | 1.4 | |
| Cerebral cortex | tissue | 1.3 | not detected |
| Retrosplenial cortex | tissue | 1.3 | |
| Insular cortex | tissue | 1.3 | |
| Basal ganglia | tissue | 1.2 | not detected |
| Retrosplenial and cingulate cortex | tissue | 1.2 | |
| Temporal cortex | tissue | 1.2 | |
| Prefrontal cortex | tissue | 1.1 | |
| Hippocampal formation | tissue | 1.1 | |
| Entorhinal cortex | tissue | 1.1 | |
| Ventral forebrain | tissue | 1.1 | |
| Occipital cortex | tissue | 1.1 | |
| Motor cortex | tissue | 1.0 | |
| Putamen | tissue | 1.0 | |
| Periaqueductal gray | tissue | 1.0 | |
| Septum | tissue | 1.0 | |
| Somatosensory cortex | tissue | 1.0 | |
| Medulla oblongata | tissue | 0.9 | |
| Substantia nigra | tissue | 0.9 | |
| Midbrain | tissue | 0.8 | |
| Hypothalamus | tissue | 0.8 | |
| Spinal cord | tissue | 0.8 | |
| Thymus | tissue | 0.8 | |
| Bone marrow | tissue | 0.8 | not detected |
| Lymph node | tissue | 0.7 | not detected |
| Pons | tissue | 0.7 | |
| Tongue | tissue | 0.7 | |
| Thalamus | tissue | 0.7 | |
| Superior colliculi | tissue | 0.7 | |
| Appendix | tissue | 0.7 | not detected |
| Skeletal muscle | tissue | 0.6 | not detected |
| Nucleus accumbens | tissue | 0.6 | |
| Testis | tissue | 0.5 | not detected |
| Adipose tissue | tissue | 0.5 | not detected |
| Vagina | tissue | 0.4 | not detected |
| Rectum | tissue | 0.4 | not detected |
| Urinary bladder | tissue | 0.4 | not detected |
| Pancreas | tissue | 0.4 | not detected |
| Placenta | tissue | 0.4 | not detected |
| Spleen | tissue | 0.4 | not detected |
| Locus coeruleus | tissue | 0.4 | |
| Hippocampus | tissue | 0.4 | not detected |
| Tonsil | tissue | 0.4 | not detected |
| Salivary gland | tissue | 0.3 | medium |
| Colon | tissue | 0.3 | not detected |
| Fallopian tube | tissue | 0.3 | not detected |
| Stomach 1 | tissue | 0.2 | |
| Seminal vesicle | tissue | 0.2 | not detected |
| Smooth muscle | tissue | 0.2 | not detected |
Brain sub-regions (HPA Brain Atlas): detected in 189; highest nTPM — White matter (1.4), Parieto-temporal junction (white matter) (1.1), Subiculum (1.1), Ventral hippocampus (1.1), Dorsal hippocampus (1.0).
Regulation
Is transcription factor: yes
Downstream targets (CollecTRI)
1 targets:
| Target | Regulation |
|---|---|
| ABCB1 | Repression |
Upstream regulators (CollecTRI, top): AHR, CEBPB, CEBPG, ESR1, FOXA2, FOXM1, FOXO1, GATA3, HNF1A, HNF1B, HNF4A, IRF3, NFE2L2, NR1H3, NR1H4, NR1I2, NR1I3, NR3C1, ONECUT1, RARA, RXRA, SP1, TP53, YBX1
miRNA regulators (miRDB)
Targeting ABCC2 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific).
showing 30 of 57 miRNAs:
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-3163 | 100.00 | 77.23 | 8605 |
| HSA-MIR-5692B | 100.00 | 71.32 | 2622 |
| HSA-MIR-5692C | 100.00 | 71.32 | 2622 |
| HSA-MIR-485-3P | 99.98 | 70.68 | 1585 |
| HSA-MIR-539-3P | 99.98 | 70.74 | 1616 |
| HSA-MIR-4789-5P | 99.98 | 70.76 | 2721 |
| HSA-MIR-548AN | 99.97 | 70.91 | 2817 |
| HSA-MIR-548D-3P | 99.87 | 70.67 | 4362 |
| HSA-MIR-548BB-3P | 99.86 | 70.58 | 4354 |
| HSA-MIR-3941 | 99.86 | 70.54 | 2735 |
| HSA-MIR-548AR-3P | 99.85 | 71.26 | 3889 |
| HSA-MIR-4728-5P | 99.85 | 69.39 | 4718 |
| HSA-MIR-548AC | 99.84 | 70.77 | 4351 |
| HSA-MIR-548H-3P | 99.84 | 70.80 | 4349 |
| HSA-MIR-548Z | 99.84 | 70.80 | 4349 |
| HSA-MIR-548AZ-3P | 99.82 | 70.56 | 3549 |
| HSA-MIR-548BC | 99.82 | 70.61 | 3524 |
| HSA-MIR-548E-3P | 99.82 | 70.59 | 3514 |
| HSA-MIR-548F-3P | 99.82 | 70.59 | 3540 |
| HSA-MIR-6785-5P | 99.82 | 68.68 | 4428 |
| HSA-MIR-548A-3P | 99.76 | 70.58 | 3524 |
| HSA-MIR-149-3P | 99.72 | 68.22 | 3963 |
| HSA-MIR-6883-5P | 99.69 | 68.05 | 3785 |
| HSA-MIR-4519 | 99.48 | 66.10 | 859 |
| HSA-MIR-297 | 99.40 | 69.58 | 1418 |
| HSA-MIR-4999-5P | 99.35 | 69.15 | 926 |
| HSA-MIR-155-5P | 99.35 | 70.16 | 1509 |
| HSA-MIR-4292 | 99.16 | 65.57 | 1767 |
| HSA-MIR-6791-5P | 99.16 | 65.92 | 1844 |
| HSA-MIR-376A-3P | 99.06 | 69.17 | 1128 |
Functional genomics
gnomAD constraint: pLI 1.55e-45, LOEUF 0.985, missense Z 1.04 — population loss-of-function intolerance (pLI ≥ 0.9 = LoF-intolerant; lower LOEUF = more constrained). gnomAD
Regional missense constraint (gnomAD RMC): no regional variation along ENST00000647814 — one region, missense o/e 0.98.
Literature-anchored findings (GeneRIF, showing 40)
- Two novel mutations in the multidrug resistance protein 2 gene in Israeli patients with Dubin-Johnson syndrome. (PMID:11477083)
- No change in cMOAT mRNA expression was detected in non-HTLV-1 Tax producing ATL cell lines following transfection with HTLV-1 Tax. (PMID:11937269)
- structural requirements for apical sorting (PMID:11952788)
- Impaired protein maturation followed by proteasomal degradation of inactive MRP2I1173F explain the deficient hepatobiliary elimination observed in this group of Dubin-Johnson syndrome patients. (PMID:12388192)
- mutation in MRP2 causes deficient maturation and impaired sorting in cells in Dubin-Johnson syndrome (PMID:12395335)
- RNA expression of this protein in breast cancer correlates with response to chemotherapy. (PMID:12576456)
- The role of multidrug resistance proteins MRP1, MRP2 and MRP3 in cellular folate homeostasis. (PMID:12628490)
- study of the interactions of drugs, organic anions, and bile acids with MRP2 substrates shows MRP2 contains two similar but nonidentical ligand binding sites: a substrate transport site and a site that regulates the affinity of the transport site (PMID:12702717)
- MRP2 active transport of estradiol-17-beta-d-glucuronide and MRP2 ATPase characteristics in isolated, inside-out membrane vesicles (PMID:12704183)
- MRP1 and MRP2 were expressed in peripheral blood cells, with more than sevenfold higher MRP1 expression. The MRP2 mRNA expression was highest in CD4+ cells, followed by CD8+ > CD56+ > CD19+ cells. (PMID:12890151)
- Homozygous mutation Arg768Trp in the ABC-transporter encoding gene multidrug-resistance-associated-protein 2 causes Dubin-Johnson syndrome (PMID:12942343)
- Disrupted localization of radixin and MRP2 supports the concept that radixin contributes to the canalicular localization of MRP2. (PMID:14568249)
- Cholestasis promotes down-regulation of MRP2 expression in the duodenum of humans. (PMID:15057744)
- ABCC2 promoter polymorphism is not a determinant of the risk of spinal dysraphism. (PMID:15211708)
- “MRP2(multidrug resistance-associated protein 2) is associated with active drug efflux and may influence oral bioavailability of common classes of drugs. (PMID:15848949)
- Dysfunction or loss of the multidrug resistance protein 2 (MRP2) is the molecular basis of Dubin-Johnson syndrome (DJS). (PMID:15870973)
- The major canalicular transporter genes are expressed at mid-gestational stage during human fetal development. (PMID:15922475)
- ABCB1, ABCC1, ABCC2, and ABCG2 haplotypes influence response to nelfinavir (PMID:16041239)
- nuclear factor, erythroid derived 2, like 2 appears to regulate Mrp2 gene expression via an antioxidant-response element element located at the proximal region of its promoter in response to exposure to xenobiotics (PMID:16426233)
- enhanced expression of MRP2 and lower expression of AQP3 are responsible for lower arsenic accumulation in arsenic-resistant cells (PMID:16672223)
- ABCC2 genotype modulates the expression in the unaffected renal cortex of renal cell cancer patients (PMID:16788565)
- The mRNA induction of MDR1, MRP1, MRP2 and MRP3 by rifampicin (Rif), dexamethasone (Dex) and omeprazole (Ome) was investigated in primary cultures of cryopreserved human and rat hepatocytes. (PMID:16946557)
- The ABCC2 c.1446C>G SNP is associated with reduced systemic exposure to pravastatin as a consequence of increased MRP2 expression. (PMID:17047488)
- the C-24T SNP of MRP2 is associated with a lower oral clearance of mycophenolic acid in steady-state conditions (PMID:17060857)
- ABCC2 polymorphism contributes to variability of methotrexate kinetics. (PMID:17112803)
- The expression of ABCC2 in nuclear membranes in human tissues is specific for poorly differentiated cells including stem cells. (PMID:17145840)
- Human corneal epithelium expresses the multidrug resistance associated protein ABCC2. ABCC2 contributes to drug efflux from the eye. (PMID:17156953)
- Allelic variants of UGT2B7, CYP2C8, and ABCC2, which may predispose to the formation and accumulation of reactive diclofenac metabolites are associated with diclofenac hepatotoxicity (PMID:17241877)
- I1173F causing DJS in Iranian Jews occurred after the separation of Iranian Jews from Moroccan Jews 2000-2600 years ago, while A244V causing FVII deficiency in Iranian and Moroccan Jews occurred prior to the divergence of these two populations. (PMID:17287630)
- Rotor-type hyperbilirubinaemia is not an allelic variant of ABCC2 deficiency. (PMID:17403188)
- Results show that the molecular model of ABCC2 agreed well with experimentally determined ABCC2-ligand interactions and the interaction of ABCC2 with quercetin glucuronides is dependent on the position and nature of substitution. (PMID:17478601)
- Mrp2 and Mrp3 provide alternative routes for the excretion of a glucuronidated substrate from the liver in vivo. (PMID:17485564)
- MRP1-Pro(1150), MRP2-Pro(1158), and MRP3-Pro(1147) in the cytoplasmic loop 7 differ in their influence on substrate specificity but share a common role in the nucleotide interactions at nucleotide binding domain 2 of these transporters. (PMID:17494643)
- 12 polymorphisms and mutations were found in the MRP2 gene in a Korean population. (PMID:17502832)
- Inhibition of renal uptake (via OAT3) and efflux processes (via MRP2 and MRP4) explains the possible sites of drug-drug interaction for methotrexate with probenecid and some NSAIDs, including their glucuronides. (PMID:17578901)
- neither MRP1 nor MRP2 appears to have a role in response to cisplatin-based chemotherapy in resected non-small cell lung cancer (PMID:17606722)
- Report disturbed colocalization of multidrug resistance protein 2 and radixin in human cholestatic liver diseases. (PMID:17725603)
- Radixin and ezrin play similar roles in the apical membrane localization of ABCC2 (MRP2) and their expression level and subcellular distribution are important factors in the regulation of ABCC2 (MRP2) at the post-transcriptional level. (PMID:17825285)
- This study showed that manipulation of drug efflux transporters may be a useful strategy for increasing the intracellular concentration and thereby enhancing the clinical efficacy of lopinavir. (PMID:17890284)
- we observed that haplotype frequency of the ABCC2 gene in intrahepatic cholestasis of pregnancy patients significantly differed from controls (PMID:17997497)
Cross-species orthologs
15 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | Abcc2 | ENSMUSG00000025194 |
| rattus_norvegicus | Abcc2 | ENSRNOG00000046727 |
| drosophila_melanogaster | l(2)03659 | FBGN0010549 |
| drosophila_melanogaster | CG7627 | FBGN0032026 |
| drosophila_melanogaster | MRP | FBGN0032456 |
| drosophila_melanogaster | CG9270 | FBGN0032908 |
| drosophila_melanogaster | CG10505 | FBGN0034612 |
| drosophila_melanogaster | Mrp5 | FBGN0038740 |
| drosophila_melanogaster | rdog | FBGN0039644 |
| drosophila_melanogaster | CG11898 | FBGN0039645 |
| drosophila_melanogaster | CG31792 | FBGN0051792 |
| drosophila_melanogaster | CG31793 | FBGN0051793 |
| drosophila_melanogaster | Mrp4 | FBGN0263316 |
| caenorhabditis_elegans | WBGENE00000477 | |
| caenorhabditis_elegans | WBGENE00003413 |
Paralogs (11): CFTR (ENSG00000001626), ABCC8 (ENSG00000006071), ABCC9 (ENSG00000069431), ABCC6 (ENSG00000091262), ABCC1 (ENSG00000103222), ABCC3 (ENSG00000108846), ABCC5 (ENSG00000114770), ABCC11 (ENSG00000121270), ABCC10 (ENSG00000124574), ABCC4 (ENSG00000125257), ABCC12 (ENSG00000140798)
Mouse-model phenotypes
Observed phenotypes of the mouse ortholog (MGI:1352447) from MGI (Alliance of Genome Resources) — knockout/mutant phenotypes, ranked by annotation count. 22 distinct phenotype terms.
| Mouse phenotype (MP) | Records |
|---|---|
| increased circulating bilirubin level | 5 |
| abnormal liver physiology | 2 |
| abnormal bile secretion | 2 |
| increased circulating cholesterol level | 2 |
| bilirubinuria | 2 |
| increased neutrophil cell number | 1 |
| increased circulating HDL cholesterol level | 1 |
| abnormal kidney physiology | 1 |
| decreased mean corpuscular volume | 1 |
| decreased hemoglobin content | 1 |
| increased circulating alanine transaminase level | 1 |
| decreased circulating alkaline phosphatase level | 1 |
| increased liver weight | 1 |
| increased kidney weight | 1 |
| abnormal bile composition | 1 |
| decreased lymphocyte cell number | 1 |
| increased circulating aspartate transaminase level | 1 |
| decreased mean corpuscular hemoglobin | 1 |
| increased physiological sensitivity to xenobiotic | 1 |
| abnormal xenobiotic pharmacokinetics | 1 |
| decreased mean platelet volume | 1 |
| abnormal blood homeostasis | 1 |
Additional cross-species homologs
Sequence homologs in species beyond Ensembl Compara’s model organisms, by Diamond local protein alignment (% sequence identity; best hit per species). Lower-identity rows are more distant homologs. The matched accessions’ gene symbols aren’t in biobtree yet, so each row shows the UniProt accession.
| Organism | UniProt | Identity | Method |
|---|---|---|---|
| Oryza sativa Indica Group | A2XCD4 | 100.0% | Diamond |
| Saccharomyces cerevisiae S288C | P0CE69 | 100.0% | Diamond |
| Oryza sativa Japonica Group | Q10RX7 | 100.0% | Diamond |
| Oryctolagus cuniculus | P82451 | 98.1% | Diamond |
| Cricetus cricetus | Q09427 | 98.0% | Diamond |
| Macaca fascicularis | Q864R9 | 97.6% | Diamond |
| Arabidopsis thaliana | Q7FB56 | 94.8% | Diamond |
| Canis lupus familiaris | Q6UR05 | 93.1% | Diamond |
| Bos taurus | Q8HXQ5 | 93.1% | Diamond |
| Zea mays | A7KVC2 | 90.5% | Diamond |
| Dictyostelium discoideum | Q8ST87 | 86.2% | Diamond |
| Gallus gallus | Q5F364 | 79.0% | Diamond |
| Schizosaccharomyces pombe 972h- | Q10185 | 63.4% | Diamond |
| Nakaseomyces glabratus CBS 138 | Q6FWS5 | 55.3% | Diamond |
| Pyricularia oryzae 70-15 | G4N2B5 | 47.9% | Diamond |
| Cryptococcus neoformans H99 | J9VQH1 | 42.5% | Diamond |
| Mycosarcoma maydis | A0A0D1CZ63 | 41.8% | Diamond |
| Talaromyces islandicus | A0A0U1LQE1 | 41.3% | Diamond |
| Aspergillus versicolor | P9WEL8 | 41.0% | Diamond |
| Candida albicans SC5314 | Q5A762 | 41.0% | Diamond |
| Aspergillus nidulans FGSC A4 | A0A1U8QTJ9 | 40.6% | Diamond |
| Leishmania tarentolae | P21441 | 40.3% | Diamond |
| Escherichia coli | Q9X2W0 | 36.1% | Diamond |
Genomic neighbors (locus context)
Genes flanking this one on the chromosome (NCBI/Entrez gene neighborhood). Positional context only — some neighbors share regulatory elements (bidirectional promoters, antisense/overlapping transcripts), but chromosomal adjacency is not itself a functional relationship (see Interactions for that).
| Symbol | Type | Entrez |
|---|---|---|
| DNMBP | protein-coding | 23268 |
| CUTC | protein-coding | 51076 |
| SLC25A28-DT | ncRNA | 123466211 |
| COX15 | protein-coding | 1355 |
| ENTPD7 | protein-coding | 57089 |
| SLC25A28 | protein-coding | 81894 |
| DNMBP-AS1 | ncRNA | 100188954 |
| CPN1 | protein-coding | 1369 |
Protein
Protein identifiers
ATP-binding cassette sub-family C member 2 — Q92887 (reviewed: Q92887)
Alternative names: Canalicular multidrug resistance protein, Canalicular multispecific organic anion transporter 1, Multidrug resistance-associated protein 2
All UniProt accessions (5): A0A3B3IRU4, A0A3B3IRZ2, A0A3B3IS94, A0A3B3ITG8, Q92887
UniProt curated annotations — full annotation on UniProt →
Function. ATP-dependent transporter of the ATP-binding cassette (ABC) family that hydrolyzes ATP to enable active transport of endogenous and xenobiotic substrates conjugated with glucuronate, glutathione or sulfate. Operates at apical membranes of polarized cells such as hepatocytes, renal and intestinal epithelial cells, where it mediates hepatobiliary and renal excretion of conjugated substrates preventing them from being recycled back into the bloodstream. Involved in canalicular bile production. Mediates hepatobiliary excretion of mono- and bis-glucuronidated bilirubin, enabling bilirubin detoxification. Mediates the efflux of steroid glucuronates and may regulate their hepatobiliary and renal metabolic clearance. Displays low affinity but high transport velocity toward androgen conjugates such as testosterone and dihydrotestosterone glucuronates as well as toward estrogen conjugates including estradiol, estrone and estriol glucuronates. May control the hepatobiliary and renal efflux of inflammatory leukotriene C4 (LTC4) and related cysteinyl leukotrienes. Transports sulfated bile salt such as taurolithocholate sulfate. It is functionally inactive toward androgen sulfates. Transports various anticancer drugs, such as anthracycline, vinca alkaloid and methotrexate and HIV-drugs such as protease inhibitors. Can confer resistance to several anticancer drugs including cisplatin, doxorubicin, epirubicin, methotrexate, etoposide and vincristine, by decreasing accumulation of these drugs in cells.
Subcellular location. Apical cell membrane.
Tissue specificity. Expressed by polarized cells in liver, kidney and intestine. The highest expression is found in liver. Expressed in small intestine.
Disease relevance. Dubin-Johnson syndrome (DJS) [MIM:237500] Autosomal recessive disorder characterized by conjugated hyperbilirubinemia, an increase in the urinary excretion of coproporphyrin isomer I, deposition of melanin-like pigment in hepatocytes, and prolonged retention of sulfobromophthalein, but otherwise normal liver function. The disease is caused by variants affecting the gene represented in this entry.
Similarity. Belongs to the ABC transporter superfamily. ABCC family. Conjugate transporter (TC 3.A.1.208) subfamily.
RefSeq proteins (1): NP_000383* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR003439 | ABC_transporter-like_ATP-bd | Domain |
| IPR003593 | AAA+_ATPase | Domain |
| IPR005292 | MRP | Family |
| IPR011527 | ABC1_TM_dom | Domain |
| IPR017871 | ABC_transporter-like_CS | Conserved_site |
| IPR027417 | P-loop_NTPase | Homologous_superfamily |
| IPR036640 | ABC1_TM_sf | Homologous_superfamily |
| IPR050173 | ABC_transporter_C-like | Family |
| IPR056227 | TMD0_ABC | Domain |
Pfam: PF00005, PF00664, PF24357
Enzyme classification (BRENDA)
- EC 7.6.2.2 — ABC-type xenobiotic transporter (BRENDA: 49 organisms, 716 substrates, 471 inhibitors, 280 Km, 31 kcat entries)
- EC 7.6.2.3 — ABC-type glutathione-S-conjugate transporter (BRENDA: 8 organisms, 145 substrates, 63 inhibitors, 16 Km, 0 kcat entries)
Substrate kinetics (BRENDA)
75 substrates with measured Km, best-characterized 15. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| ATP | 0.0009–9 | 105 |
| VERAPAMIL/IN | 0.0006–0.0058 | 11 |
| VINBLASTINE/IN | 0.0002–0.1455 | 11 |
| ESTRADIOL 17-BETA-D-GLUCURONIDE/IN | 0.013–0.17 | 7 |
| LEUKOTRIENE C4/IN | — | 7 |
| METHOTREXATE/IN | 0.24–0.776 | 6 |
| NICARDIPINE/IN | 0.0004–0.0026 | 6 |
| PROGESTERONE/IN | 0.0038–0.0207 | 6 |
| CYCLIC GUANOSINE MONOPHOSPHATE/IN | 0.36–2 | 5 |
| VERAPAMIL | 0.0022–0.0115 | 5 |
| ATP | 0.0865–0.91 | 5 |
| COLCHICINE/IN | 0.037–0.72 | 4 |
| FOLIC ACID/IN | 0.13–0.26 | 4 |
| PACLITAXEL/IN | 0.0007–0.0009 | 4 |
| RHODAMINE 123/IN | 0.0118–0.0354 | 4 |
Catalyzed reactions (Rhea)
- an S-substituted glutathione(in) + ATP + H2O = an S-substituted glutathione(out) + ADP + phosphate + H(+) (RHEA:19121)
- leukotriene C4(in) + ATP + H2O = leukotriene C4(out) + ADP + phosphate + H(+) (RHEA:38963)
- taurolithocholate 3-sulfate(in) + ATP + H2O = taurolithocholate 3-sulfate(out) + ADP + phosphate + H(+) (RHEA:50084)
- 17beta-estradiol 17-O-(beta-D-glucuronate)(in) + ATP + H2O = 17beta-estradiol 17-O-(beta-D-glucuronate)(out) + ADP + phosphate + H(+) (RHEA:60128)
- (4Z,15Z)-bilirubin IXalpha C8-beta-D-glucuronoside(in) + ATP + H2O = (4Z,15Z)-bilirubin IXalpha C8-beta-D-glucuronoside(out) + ADP + phosphate + H(+) (RHEA:66180)
- (4Z,15Z)-bilirubin IXalpha C8,C12-beta-D-bisglucuronoside(in) + ATP + H2O = (4Z,15Z)-bilirubin IXalpha C8,C12-beta-D-bisglucuronoside(out) + ADP + phosphate + H(+) (RHEA:66192)
- (4Z,15Z)-bilirubin IXalpha C12-beta-D-glucuronoside(in) + ATP + H2O = (4Z,15Z)-bilirubin IXalpha C12-beta-D-glucuronoside(out) + ADP + phosphate + H(+) (RHEA:79155)
- 3beta-androst-5-en-17-one 3-O-(beta-D-glucuronate)(in) + ATP + H2O = 3beta-androst-5-en-17-one 3-O-(beta-D-glucuronate)(out) + ADP + phosphate + H(+) (RHEA:86835)
- epitestosterone 17-O-(beta-D-glucuronate)(in) + ATP + H2O = epitestosterone 17-O-(beta-D-glucuronate)(out) + ADP + phosphate + H(+) (RHEA:86839)
- 3alpha-hydroxyetiocholan-17-one 3-O-(beta-D-glucuronate)(in) + ATP + H2O = 3alpha-hydroxyetiocholan-17-one 3-O-(beta-D-glucuronate)(out) + ADP + phosphate + H(+) (RHEA:86843)
- testosterone 17-O-(beta-D-glucuronate)(in) + ATP + H2O = testosterone 17-O-(beta-D-glucuronate)(out) + ADP + phosphate + H(+) (RHEA:86847)
- estrone 3-O-(beta-D-glucuronate)(in) + ATP + H2O = estrone 3-O-(beta-D-glucuronate)(out) + ADP + phosphate + H(+) (RHEA:86851)
UniProt features (206 total): helix 77, strand 32, sequence variant 29, topological domain 18, transmembrane region 17, turn 11, modified residue 7, domain 4, glycosylation site 3, mutagenesis site 3, binding site 2, chain 1, region of interest 1, sequence conflict 1
Structure
Experimental structures (PDB)
16 structures by resolution:
| PDB | Title | Method | Resolution (Å) |
|---|---|---|---|
| 9C12 | Leukotriene C4-bound Multidrug Resistance-associated Protein 2 (MRP2) | ELECTRON MICROSCOPY | 2.75 |
| 8IZQ | Multidrug resistance-associated protein 3 | ELECTRON MICROSCOPY | 3.31 |
| 8JXQ | Cryo-EM structure of bilirubin ditaurate (BDT) bound human ABC transporter ABCC2 | ELECTRON MICROSCOPY | 3.32 |
| 9BUK | Outward-facing, ATP-bound Multidrug Resistance-associated Protein 2 (MRP2) (E1462Q) | ELECTRON MICROSCOPY | 3.4 |
| 9BR2 | Inward-facing, ATP-bound Multidrug Resistance-associated Protein 2 (MRP2) (E1462Q) | ELECTRON MICROSCOPY | 3.41 |
| 9JN2 | Multidrug resistance-associated protein 2 in complex with AMP-PNP in active state | ELECTRON MICROSCOPY | 3.44 |
| 9JCS | Multidrug resistance-associated protein 2 in complex with MK-571 | ELECTRON MICROSCOPY | 3.47 |
| 9JC0 | Multidrug resistance-associated protein 2 in complex with MK-571 and ATP | ELECTRON MICROSCOPY | 3.52 |
| 8JXU | Cryo-EM structure of human ABC transporter ABCC2 under active turnover condition | ELECTRON MICROSCOPY | 3.55 |
| 9JB7 | Multidrug resistance-associated protein 2 in complex with SN-38G | ELECTRON MICROSCOPY | 3.55 |
| 9JN1 | apo Multidrug resistance-associated protein 2 in complex with AMP-PNP in rest state | ELECTRON MICROSCOPY | 3.56 |
| 8JY4 | Cryo-EM structure of human ABC transporter ABCC2 in apo’ state | ELECTRON MICROSCOPY | 3.58 |
| 8JX7 | Cryo-EM structure of human ABC transporter ABCC2 | ELECTRON MICROSCOPY | 3.6 |
| 8IZR | Multidrug resistance-associated protein 2 | ELECTRON MICROSCOPY | 3.62 |
| 9C2I | Inward-facing, ligand-free Multidrug Resistance-associated protein 2 (MRP2) | ELECTRON MICROSCOPY | 3.62 |
| 8JY5 | Cryo-EM structure of human ABC transporter ABCC2 in apo” state | ELECTRON MICROSCOPY | 4.17 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q92887-F1 | 81.40 | 0.38 |
Human Protein Atlas
Protein class: Enzymes, ENZYME proteins, Metabolic proteins, Transporters, Primary Active Transporters, Predicted membrane proteins, Plasma proteins, Cancer-related genes, Candidate cancer biomarkers, Disease related genes, FDA approved drug targets, Small molecule drugs, Human disease related genes, Congenital disorders of metabolism, Congenital disorders of cofactor/vitamin metabolism
Protein evidence: Evidence at protein level
Antibody reliability (HPA): IH enhanced
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Ligand- & substrate-binding residues (2)
| Position | Role |
|---|---|
| 671–678 | ATP |
| 1334–1341 | ATP |
Post-translational modifications (7)
| Type | Positions |
|---|---|
| Phosphoserine | 281, 283, 878, 926, 930, 938, 1438 |
Glycosylation sites (3)
| Type | Positions |
|---|---|
| N-linked (glcnac…) asparagine | 7, 12, 1011 |
Mutagenesis-validated functional residues (3)
| Position | Phenotype |
|---|---|
| 1254 | fails to transport methotrexate, leukotriene c4 and estradiol glucuronide. |
| 1254 | fails to transport methotrexate and leukotriene c4. does not affect estradiol glucuronide transport. |
| 1254 | fails to transport methotrexate; reduces leukotriene c4 transport. does not affect estradiol glucuronide transport. |
Function
Pathways and Gene Ontology
Reactome pathways
6 curated (TAS) of 13; 4 disease pathways. Curated-first; evidence = TAS (manually curated) vs IEA (electronic inference).
13 pathways:
| ID | Pathway | Evidence |
|---|---|---|
| R-HSA-5679001 | Defective ABCC2 causes DJS ⚕ | curated |
| R-HSA-382556 | ABC-family protein mediated transport | curated |
| R-HSA-9749641 | Aspirin ADME | curated |
| R-HSA-9754706 | Atorvastatin ADME | curated |
| R-HSA-189483 | Heme degradation | curated |
| R-HSA-9753281 | Paracetamol ADME | curated |
| R-HSA-5619084 | ABC transporter disorders ⚕ | — |
| R-HSA-1643685 | Disease ⚕ | — |
| R-HSA-5619115 | Disorders of transmembrane transporters ⚕ | — |
| R-HSA-9748784 | Drug ADME | — |
| R-HSA-1430728 | Metabolism | — |
| R-HSA-189445 | Metabolism of porphyrins | — |
| R-HSA-382551 | Transport of small molecules | — |
MSigDB gene sets: 273 (showing top):
GOBP_RESPONSE_TO_NITROGEN_COMPOUND, GOBP_EPITHELIUM_DEVELOPMENT, GOBP_MUSCLE_TISSUE_DEVELOPMENT, YAGI_AML_WITH_INV_16_TRANSLOCATION, GOBP_CIRCULATORY_SYSTEM_PROCESS, GOBP_RESPONSE_TO_PEPTIDE, GOBP_TRANSITION_METAL_ION_TRANSPORT, GOBP_MODIFIED_AMINO_ACID_TRANSPORT, REACTOME_METABOLISM_OF_PORPHYRINS, MODULE_418, GOBP_STRIATED_MUSCLE_CELL_DIFFERENTIATION, ACEVEDO_NORMAL_TISSUE_ADJACENT_TO_LIVER_TUMOR_DN, GOCC_CELL_SURFACE, SAENZ_DETOX_PATHWAY_AND_CARCINOGENESIS_DN, GOBP_XENOBIOTIC_TRANSMEMBRANE_TRANSPORT
GO Biological Process (14): xenobiotic metabolic process (GO:0006805), xenobiotic transmembrane transport (GO:0006855), negative regulation of gene expression (GO:0010629), bile acid and bile salt transport (GO:0015721), bilirubin transport (GO:0015723), heme catabolic process (GO:0042167), xenobiotic export from cell (GO:0046618), transmembrane transport (GO:0055085), transepithelial transport (GO:0070633), leukotriene transport (GO:0071716), transport across blood-brain barrier (GO:0150104), xenobiotic transport across blood-brain barrier (GO:1990962), lipid transport (GO:0006869), carboxylic acid transport (GO:0046942)
GO Molecular Function (12): ATP binding (GO:0005524), ABC-type xenobiotic transporter activity (GO:0008559), bilirubin transmembrane transporter activity (GO:0015127), ABC-type glutathione S-conjugate transporter activity (GO:0015431), ATP hydrolysis activity (GO:0016887), toxin transmembrane transporter activity (GO:0019534), transmembrane transporter activity (GO:0022857), ATPase-coupled transmembrane transporter activity (GO:0042626), xenobiotic transmembrane transporter activity (GO:0042910), ABC-type transporter activity (GO:0140359), nucleotide binding (GO:0000166), protein binding (GO:0005515)
GO Cellular Component (6): plasma membrane (GO:0005886), cell surface (GO:0009986), apical plasma membrane (GO:0016324), vesicle (GO:0031982), intercellular canaliculus (GO:0046581), membrane (GO:0016020)
Reactome top-level categories
7 top-level categories:
| Category | Pathways |
|---|---|
| Drug ADME | 3 |
| Metabolism of porphyrins | 1 |
| Transport of small molecules | 1 |
| ABC transporter disorders | 1 |
| Metabolism | 1 |
| Disorders of transmembrane transporters | 1 |
| Disease | 1 |
GO top-level categories
48 GO namespaces:
| Category | Terms |
|---|---|
| xenobiotic transport | 4 |
| transmembrane transport | 3 |
| transport | 3 |
| ABC-type transporter activity | 2 |
| ATP-dependent activity | 2 |
| transmembrane transporter activity | 2 |
| cellular anatomical structure | 2 |
| metabolic process | 1 |
| cellular response to xenobiotic stimulus | 1 |
| gene expression | 1 |
| regulation of gene expression | 1 |
| negative regulation of macromolecule biosynthetic process | 1 |
| lipid transport | 1 |
| monocarboxylic acid transport | 1 |
| organic hydroxy compound transport | 1 |
| dicarboxylic acid transport | 1 |
| nitrogen compound transport | 1 |
| porphyrin-containing compound catabolic process | 1 |
| heme metabolic process | 1 |
| pigment catabolic process | 1 |
| export from cell | 1 |
| cellular process | 1 |
| icosanoid transport | 1 |
| vascular transport | 1 |
| transport across blood-brain barrier | 1 |
| lipid localization | 1 |
| organic acid transport | 1 |
| adenyl ribonucleotide binding | 1 |
| purine ribonucleoside triphosphate binding | 1 |
| anion binding | 1 |
| xenobiotic transmembrane transporter activity | 1 |
| dicarboxylic acid transmembrane transporter activity | 1 |
| bilirubin transport | 1 |
| sulfur compound transmembrane transporter activity | 1 |
| ribonucleoside triphosphate phosphatase activity | 1 |
| transporter activity | 1 |
| primary active transmembrane transporter activity | 1 |
| ATP hydrolysis activity | 1 |
| ATPase-coupled transmembrane transporter activity | 1 |
| nucleoside phosphate binding | 1 |
| heterocyclic compound binding | 1 |
| binding | 1 |
| membrane | 1 |
| cell periphery | 1 |
| apical part of cell | 1 |
| plasma membrane region | 1 |
| membrane-bounded organelle | 1 |
| cell-cell junction | 1 |
Experimentally-supported GO annotations
GO terms backed by direct experimental evidence (ECO experimental codes) — 13 of 32 annotations. The rest are phylogenetic / computational / electronic (IEA).
13 experimentally-supported GO terms:
| GO term | NS | Evidence |
|---|---|---|
| bile acid and bile salt transport | BP | mutant phenotype |
| bilirubin transport | BP | mutant phenotype |
| heme catabolic process | BP | mutant phenotype |
| leukotriene transport | BP | mutant phenotype |
| xenobiotic export from cell | BP | mutant phenotype |
| xenobiotic transmembrane transport | BP | mutant phenotype |
| apical plasma membrane | CC | direct assay |
| cell surface | CC | direct assay |
| ABC-type glutathione S-conjugate transporter activity | MF | mutant phenotype |
| ABC-type xenobiotic transporter activity | MF | mutant phenotype |
| ATPase-coupled transmembrane transporter activity | MF | direct assay |
| bilirubin transmembrane transporter activity | MF | mutant phenotype |
| xenobiotic transmembrane transporter activity | MF | direct assay |
Protein interactions and networks
STRING
showing 15 of 1,636 interactions by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| ABCC2 | SLC22A8 | Q8TCC7 | 896 |
| ABCC2 | ABCG2 | Q9UNQ0 | 888 |
| ABCC2 | SLCO1B1 | Q9Y6L6 | 798 |
| ABCC2 | SLCO1B3 | Q9NPD5 | 768 |
| ABCC2 | SLC10A1 | Q14973 | 752 |
| ABCC2 | SLCO1A2 | P46721 | 719 |
| ABCC2 | CYP3A4 | P05184 | 719 |
| ABCC2 | UGT1A6 | P19224 | 716 |
| ABCC2 | UGT1A1 | P22309 | 716 |
| ABCC2 | SLCO2B1 | O94956 | 715 |
| ABCC2 | UGT1A7 | Q9HAW7 | 715 |
| ABCC2 | UGT1A8 | Q9HAW9 | 715 |
| ABCC2 | NR1I2 | O75469 | 705 |
| ABCC2 | UGT1A4 | P22310 | 702 |
| ABCC2 | UGT1A10 | Q9HAW8 | 701 |
IntAct
Human interaction partners of ABCC2 in IntAct, one row per partner (best MIscore; records = supporting IntAct interaction records).
6 partners by confidence:
| Partner | Interaction type | MIscore | Records |
|---|---|---|---|
| NFKB1 | physical association | 0.510 | 3 |
| HNRNPDL | physical association | 0.400 | 1 |
| AZIN1 | physical association | 0.370 | 1 |
| MCPH1 | physical association | 0.370 | 1 |
| SHANK3 | physical association | 0.370 | 1 |
| UBQLN1 | physical association | 0.370 | 1 |
BioGRID (96 interactions; top human partners by supporting records): PDZK1 (Two-hybrid; 3 records), SLC9A3R1 (Reconstituted Complex; 3 records), NFKB1 (Affinity Capture-Western; 2 records), ABCA3 (Co-fractionation), ABCC4 (Co-fractionation), AP2M1 (Affinity Capture-Western), ATP11C (Co-fractionation), ATP6V1B1 (Co-fractionation), ATP6V1E1 (Co-fractionation), AZIN1 (Two-hybrid), B4GAT1 (Affinity Capture-MS), CACNG2 (Affinity Capture-MS), CHCHD2 (Co-fractionation), CLTC (Affinity Capture-Western), CYP26B1 (Affinity Capture-MS)
SIGNOR signaling
1 signaling interactions:
| A | Effect | B | Mechanism |
|---|---|---|---|
| IRF3 | “up-regulates quantity by expression” | ABCC2 | “transcriptional regulation” |
Disease & clinical
Genetic variants
Variant evidence for ABCC2: 1,337 ClinVar records (190 pathogenic / likely pathogenic); 51 PharmGKB clinical annotations; 7 GWAS associations. Per-variant detail is on Sugi Variant.
ClinVar
1,337 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 132 |
| Likely pathogenic | 58 |
| Uncertain significance | 370 |
| Likely benign | 549 |
| Benign | 75 |
Top pathogenic / likely-pathogenic (15)
Showing the 15 best-reviewed of 190 pathogenic / likely-pathogenic ClinVar records, ranked by ClinVar review status (expert panel → multiple submitters → single submitter), then by number of submitting labs.
| Variant ID | HGVS | Classification | Review | Submitters |
|---|---|---|---|---|
| 8418 | NM_000392.5(ABCC2):c.3517A>T (p.Ile1173Phe) | Pathogenic | criteria provided, multiple submitters, no conflicts | 6 |
| 290862 | NM_000392.5(ABCC2):c.3399_3400del (p.Tyr1134fs) | Pathogenic | criteria provided, multiple submitters, no conflicts | 5 |
| 595904 | NM_000392.5(ABCC2):c.3216dup (p.Asp1073Ter) | Pathogenic | criteria provided, multiple submitters, no conflicts | 5 |
| 818031 | NM_000392.5(ABCC2):c.4239_4240dup (p.His1414fs) | Pathogenic | criteria provided, multiple submitters, no conflicts | 4 |
| 195649 | NM_000392.5(ABCC2):c.2901C>A (p.Tyr967Ter) | Pathogenic | criteria provided, multiple submitters, no conflicts | 3 |
| 593171 | NM_000392.5(ABCC2):c.2260del (p.Ile754fs) | Pathogenic | criteria provided, multiple submitters, no conflicts | 3 |
| 593738 | NM_000392.5(ABCC2):c.3538C>T (p.Gln1180Ter) | Pathogenic | criteria provided, multiple submitters, no conflicts | 3 |
| 593794 | NM_000392.5(ABCC2):c.2325del (p.Tyr776fs) | Pathogenic | criteria provided, multiple submitters, no conflicts | 3 |
| 598367 | NM_000392.5(ABCC2):c.2443C>T (p.Arg815Ter) | Pathogenic | criteria provided, multiple submitters, no conflicts | 3 |
| 2735469 | NM_000392.5(ABCC2):c.3825C>G (p.Tyr1275Ter) | Pathogenic | criteria provided, multiple submitters, no conflicts | 3 |
| 2735470 | NM_000392.5(ABCC2):c.3928C>T (p.Arg1310Ter) | Pathogenic | criteria provided, multiple submitters, no conflicts | 3 |
| 498026 | NM_000392.5(ABCC2):c.3220_3226del (p.Thr1074fs) | Pathogenic | criteria provided, multiple submitters, no conflicts | 2 |
| 498804 | NM_000392.5(ABCC2):c.3599G>A (p.Trp1200Ter) | Pathogenic | criteria provided, multiple submitters, no conflicts | 2 |
| 498805 | NM_000392.5(ABCC2):c.3500dup (p.Ser1168fs) | Pathogenic | criteria provided, multiple submitters, no conflicts | 2 |
| 501700 | NM_000392.5(ABCC2):c.476del (p.Asn159fs) | Pathogenic | criteria provided, multiple submitters, no conflicts | 2 |
Per-variant reference — Sugi Variant
Explore ABCC2’s pathogenic and likely-pathogenic variants individually — each with its ClinVar classification and conditions, applied ACMG criteria (ClinGen expert panel, where curated), the calibrated in-silico predictors (AlphaMissense, REVEL, SaProt, conservation), gnomAD frequency, and the predictor-disagreement QC signal — on Sugi Variant.
SpliceAI
Top 10 splice-impact sites by Δscore (adjacent positions with the same effect merged into one range; 35 predictions of 2,644):
| Position(s) | Effect | Δscore | Sites |
|---|---|---|---|
| 10:99792360–99792361 | donor_loss | 1.0000 | 5 |
| 10:99805448–99805449 | donor_loss | 1.0000 | 5 |
| 10:99817198 | donor_gain | 1.0000 | |
| 10:99817208 | donor_gain | 1.0000 | |
| 10:99830305–99830306 | acceptor_loss | 1.0000 | 6 |
| 10:99830434 | donor_loss | 1.0000 | 3 |
| 10:99843797–99843798 | acceptor_loss | 1.0000 | 3 |
| 10:99843901–99843902 | donor_loss | 1.0000 | 5 |
| 10:99844316 | acceptor_gain | 1.0000 | |
| 10:99844320–99844321 | acceptor_loss | 1.0000 | 5 |
AlphaMissense
3,076 missense substitutions predicted likely pathogenic (of 10,172 scored), across 909 residues. Top 20 hotspot residues, ranked by the number of likely-pathogenic substitutions (of those reachable by a single-nucleotide change), then by mean score:
| Residue | Likely-pathogenic substitutions | Mean am_pathogenicity | Max am_pathogenicity |
|---|---|---|---|
| D792 | 8 | 0.991 | 0.997 |
| D785 | 8 | 0.980 | 0.993 |
| D1461 | 8 | 0.980 | 0.993 |
| H1493 | 8 | 0.980 | 0.994 |
| D427 | 8 | 0.977 | 0.989 |
| D742 | 8 | 0.974 | 0.987 |
| S762 | 8 | 0.970 | 0.999 |
| D1092 | 8 | 0.970 | 0.991 |
| D1468 | 8 | 0.965 | 0.989 |
| D786 | 8 | 0.956 | 0.989 |
| D1087 | 8 | 0.952 | 0.988 |
| F580 | 8 | 0.951 | 0.993 |
| D496 | 8 | 0.950 | 0.990 |
| F1348 | 8 | 0.934 | 0.984 |
| F562 | 8 | 0.928 | 0.980 |
| F1387 | 8 | 0.922 | 0.984 |
| F586 | 8 | 0.920 | 0.981 |
| F721 | 8 | 0.914 | 0.977 |
| D1361 | 8 | 0.910 | 0.981 |
| S1438 | 8 | 0.910 | 0.994 |
HPA cancer prognostics
RNA cancer specificity: Cancer enhanced (Liver Hepatocellular Carcinoma)
Human Protein Atlas survival analysis — favorable = higher expression predicts better survival.
2 prognostic cancer types:
| Cancer | Prognostic | p-value |
|---|---|---|
| Lung Adenocarcinoma (TCGA) | unfavorable | 5.77e-07 |
| Kidney Renal Papillary Cell Carcinoma (TCGA) | unfavorable | 5.54e-05 |
Disease associations
OMIM: gene MIM:601107 | disease phenotypes: MIM:237500, MIM:264800
GenCC curated gene-disease
1 curated gene-disease records:
| Disease | Classification | Inheritance | Records |
|---|---|---|---|
| Dubin-Johnson syndrome | Strong | Autosomal recessive | 3 |
Genomics England panels (PanelApp)
Clinical diagnostic gene panels including this gene (2 panels, 2 green/diagnostic-grade). Confidence: green = diagnostic, amber = moderate.
2 panels:
| Panel | Rating |
|---|---|
| Cholestasis | green |
| Neonatal cholestasis | green |
Mondo (2): Dubin-Johnson syndrome (MONDO:0009380), autosomal recessive inherited pseudoxanthoma elasticum (MONDO:0009925)
Orphanet (2): Dubin-Johnson syndrome (Orphanet:234), Pseudoxanthoma elasticum (Orphanet:758)
HPO phenotypes
12 phenotypes (HPO-id order):
| HPO | Term |
|---|---|
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000952 | Jaundice |
| HP:0001080 | Biliary tract abnormality |
| HP:0001392 | Abnormality of the liver |
| HP:0001928 | Abnormality of coagulation |
| HP:0001945 | Fever |
| HP:0002027 | Abdominal pain |
| HP:0002240 | Hepatomegaly |
| HP:0002908 | Conjugated hyperbilirubinemia |
| HP:0004295 | Abnormal gastric mucosa morphology |
| HP:0012086 | Abnormal urinary color |
| HP:0012378 | Fatigue |
GWAS associations
7 associations:
| Study | Trait | p-value |
|---|---|---|
| GCST90013407_155 | Liver enzyme levels (gamma-glutamyl transferase) | 6e-47 |
| GCST012020_372 | Serum metabolite levels | 6e-18 |
| GCST002411_7 | Colorectal cancer | 5e-11 |
| GCST003017_9 | Colorectal cancer | 4e-8 |
| GCST003017_4 | Colorectal cancer | 8e-7 |
| GCST010484_6 | Stent thrombosis in response to clopidogrel treatment | 1e-6 |
| GCST005351_13 | Carboplatin disposition in epthelial ovarian cancer | 5e-6 |
EFO canonical traits (from GWAS)
2 canonical traits:
| EFO ID | Trait name |
|---|---|
| EFO:0006919 | cardiovascular event measurement |
| EFO:0004532 | serum gamma-glutamyl transferase measurement |
MeSH disease descriptors
2 disease descriptors:
| Descriptor | Name | Tree numbers |
|---|---|---|
| D007566 | Jaundice, Chronic Idiopathic | C16.320.565.300.764; C16.614.451.500.250; C18.452.648.300.764; C23.550.291.500.479 |
| D011561 | Pseudoxanthoma Elasticum | C14.907.454.530; C15.378.463.515.530; C16.131.831.766; C16.320.850.750; C17.300.766; C17.800.804.766; C17.800.827.750 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (2): CHEMBL3885536 (PROTEIN FAMILY), CHEMBL5748 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
Phase ≥1, by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 1,358,927 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
35 molecules by phase:
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL388590 | BENZBROMARONE | 4 | 8,286 |
| CHEMBL1541 | CEFIXIME | 4 | 28,030 |
| CHEMBL1292 | CLOFAZIMINE | 4 | 15,677 |
| CHEMBL160 | CYCLOSPORINE | 4 | 169,776 |
| CHEMBL387675 | DAPTOMYCIN | 4 | 19,963 |
| CHEMBL178 | DAUNORUBICIN | 4 | 205,873 |
| CHEMBL56337 | EPALRESTAT | 4 | 111 |
| CHEMBL813 | EPROSARTAN | 4 | 19,625 |
| CHEMBL553 | ERLOTINIB | 4 | 109,860 |
| CHEMBL456 | ETHACRYNIC ACID | 4 | 20,123 |
| CHEMBL308954 | ETRAVIRINE | 4 | 11,476 |
| CHEMBL1908360 | EVEROLIMUS | 4 | 74,649 |
| CHEMBL6067487 | IVERMECTIN | 4 | |
| CHEMBL1200775 | LEUPROLIDE ACETATE | 4 | 69,527 |
| CHEMBL897 | PROBENECID | 4 | 105,849 |
| CHEMBL1272 | REPAGLINIDE | 4 | 33,658 |
| CHEMBL772 | RESERPINE | 4 | 330,863 |
| CHEMBL444633 | RIFABUTIN | 4 | 28,036 |
| CHEMBL374478 | RIFAMPIN | 4 | 94,660 |
| CHEMBL1660 | RIFAPENTINE | 4 | 12,885 |
| CHEMBL1617 | RIFAXIMIN | 4 | |
| CHEMBL1064 | SIMVASTATIN | 4 | |
| CHEMBL269732 | TACROLIMUS ANHYDROUS | 4 | |
| CHEMBL1201182 | TEMSIROLIMUS | 4 | |
| CHEMBL1096885 | VALRUBICIN | 4 | |
| CHEMBL159 | VINBLASTINE | 4 | |
| CHEMBL603 | ZAFIRLUKAST | 4 | |
| CHEMBL1651956 | ALISPORIVIR | 3 | |
| CHEMBL1829174 | FASIGLIFAM | 3 | |
| CHEMBL77305 | RUBITECAN | 3 | |
| CHEMBL265502 | SURAMIN | 3 | |
| CHEMBL1086218 | VALSPODAR | 3 | |
| CHEMBL4297270 | BMS-986020 | 2 | |
| CHEMBL2013174 | VEDROPREVIR | 2 | |
| CHEMBL3314565 | AZD-5099 | 1 |
PharmGKB: 1 entry (CPIC guideline: no)
PharmGKB clinical annotations
51 annotations by evidence level (1 strongest → 4):
| Variant | Association | Level | Drugs | Phenotypes |
|---|---|---|---|---|
| rs113646094 | Metabolism/PK | 3 | pravastatin | |
| rs12762549 | Toxicity,Metabolism/PK | 3 | docetaxel | |
| rs17222723 | Toxicity | 3 | tenofovir | HIV infectious disease |
| rs17222723 | Toxicity | 3 | doxorubicin | Cardiac rhythm disease;Drug Toxicity;Non-Hodgkin Lymphoma |
| rs17222723 | Toxicity | 3 | methotrexate | Leukopenia;Osteosarcoma |
| rs2273697 | Other | 3 | irinotecan | Colorectal Neoplasms |
| rs2273697 | Toxicity | 3 | carbamazepine | Epilepsy |
| rs2273697 | Metabolism/PK | 3 | deferasirox | Beta-thalassemia and related diseases |
| rs2273697 | Efficacy | 3 | cisplatin;pemetrexed | Mesothelioma |
| rs2273697 | Toxicity | 3 | cyclophosphamide;doxorubicin;fluorouracil | Breast Neoplasms |
| rs2273697 | Metabolism/PK | 3 | ceftriaxone | Central Nervous System Infectious Disorder |
| rs2273697 | Efficacy | 3 | imatinib | Gastrointestinal Stromal Tumors |
| rs2273697 | Metabolism/PK | 3 | talinolol | |
| rs3740065 | Efficacy | 3 | tamoxifen | Breast Neoplasms |
| rs3740065 | Toxicity | 3 | Drugs For Treatment Of Tuberculosis | Toxic liver disease;Tuberculosis |
| rs3740065 | Toxicity | 3 | methotrexate | Acute lymphoblastic leukemia;Burkitt Lymphoma;Drug Toxicity;Lymphoma;Mucositis;Non-Small Cell Lung Carcinoma;Osteosarcoma |
| rs3740066 | Toxicity | 3 | irinotecan | Non-Small Cell Lung Carcinoma |
| rs3740066 | Metabolism/PK | 3 | carbamazepine | Epilepsy |
| rs3740066 | Metabolism/PK | 3 | mycophenolic acid | Organ Transplantation |
| rs3740066 | Metabolism/PK | 3 | tacrolimus | Kidney Transplantation |
| rs3740066 | Toxicity | 3 | cyclophosphamide;doxorubicin;fluorouracil | Breast Neoplasms |
| rs4148386 | Metabolism/PK | 3 | carbamazepine | Epilepsy |
| rs717620 | Other | 3 | erythromycin | |
| rs717620 | Efficacy | 3 | atorvastatin | Hypercholesterolemia |
| rs717620 | Metabolism/PK | 3 | pitavastatin | |
| rs717620 | Toxicity | 3 | tenofovir | HIV infectious disease |
| rs717620 | Efficacy | 3 | cisplatin;doxorubicin;methotrexate | Osteosarcoma |
| rs717620 | Toxicity | 3 | methotrexate | Acute lymphoblastic leukemia;Leukemia;Lymphoma;Osteosarcoma |
| rs717620 | Metabolism/PK | 3 | mycophenolic acid;tacrolimus | Kidney Transplantation |
| rs717620 | Dosage | 3 | atorvastatin;simvastatin | |
| rs717620 | Toxicity | 3 | deferasirox | Beta-thalassemia and related diseases |
| rs717620 | Metabolism/PK | 3 | efavirenz | HIV infectious disease |
| rs717620 | Toxicity | 3 | atazanavir;lopinavir;ritonavir;tenofovir | |
| rs717620 | Efficacy | 3 | tamoxifen | Breast Neoplasms |
| rs717620 | Toxicity | 3 | fluorouracil;leucovorin;oxaliplatin | Colonic Neoplasms |
| rs717620 | Toxicity | 3 | fluorouracil;leucovorin;oxaliplatin | Colorectal Neoplasms |
| rs717620 | Toxicity | 3 | sorafenib | Exanthema |
| rs7917432 | Toxicity | 3 | tenofovir | HIV infectious disease |
| rs8187707 | Toxicity | 3 | tenofovir | HIV infectious disease |
| rs8187710 | Toxicity | 3 | doxorubicin | Non-Hodgkin Lymphoma |
| rs8187710 | Other | 3 | calcein;lopinavir | |
| rs8187710 | Efficacy | 3 | lopinavir | HIV infectious disease |
| rs8187710 | Toxicity | 3 | deferasirox | Beta-thalassemia and related diseases |
| rs2273697 | Toxicity | 4 | tenofovir | HIV infectious disease;Kidney Disorder |
| rs2273697 | Toxicity | 4 | methotrexate | Rheumatoid arthritis |
| rs2273697 | Toxicity | 4 | antiepileptics;carbamazepine;oxcarbazepine | Epilepsy |
| rs3740065 | Metabolism/PK | 4 | methotrexate | Acute lymphoblastic leukemia;Burkitt Lymphoma;Osteosarcoma |
| rs3740066 | Efficacy | 4 | antiepileptics | Epilepsy |
| rs717620 | Efficacy | 4 | antiepileptics | Epilepsy |
| rs717620 | Metabolism/PK | 4 | methotrexate | Acute lymphoblastic leukemia;Lymphoid Leukemia |
| rs8187710 | Toxicity | 4 | tenofovir | Fanconi renotubular syndrome;HIV infectious disease |
PharmGKB variants
11 variants:
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs717620 | ABCC2 | 3 | 3.00 | 17 | pitavastatin;erythromycin;fluorouracil;leucovorin;oxaliplatin;antiepileptics;atorvastatin;atorvastatin;simvastatin;methotrexate;cisplatin;doxorubicin;methotrexate;deferasirox;efavirenz |
| rs2273697 | ABCC2 | 3 | 3.00 | 11 | talinolol;antiepileptics;carbamazepine;oxcarbazepine;tenofovir;cisplatin;pemetrexed;imatinib;ceftriaxone;irinotecan;methotrexate;cyclophosphamide;doxorubicin;fluorouracil;deferasirox |
| rs3740065 | ABCC2 | 3 | 3.25 | 4 | methotrexate;tamoxifen;Drugs For Treatment Of Tuberculosis |
| rs3740066 | ABCC2 | 3 | 5.50 | 6 | antiepileptics;irinotecan;cyclophosphamide;doxorubicin;fluorouracil;tacrolimus;carbamazepine;mycophenolic acid |
| rs4148386 | ABCC2 | 3 | 1.00 | 1 | carbamazepine |
| rs7917432 | ABCC2, RUFY2 | 3 | 2.00 | 1 | tenofovir |
| rs8187707 | ABCC2 | 3 | 0.25 | 1 | tenofovir |
| rs8187710 | ABCC2 | 3 | 2.25 | 5 | tenofovir;lopinavir;calcein;lopinavir;doxorubicin;deferasirox |
| rs12762549 | ABCC2 | 3 | 1.00 | 1 | docetaxel |
| rs17222723 | ABCC2 | 3 | 2.25 | 3 | doxorubicin;methotrexate;tenofovir |
| rs113646094 | ABCC2 | 3 | 1.00 | 1 | pravastatin |
PharmGKB variant annotations
Per-publication pharmacogenomic findings for this gene (significant associations).
showing 59 of 119 published findings:
| Variant | Drug(s) | Category | Finding | PMID |
|---|---|---|---|---|
| rs717620 | methotrexate | Toxicity | Allele T is associated with increased risk of Drug Toxicity when treated with methotrexate in children with Precursor Cell Lymphoblastic Leukemia-Lymphoma as compared to allele C. | PMID:24404132 |
| rs717620 | methotrexate | Metabolism/PK | Allele T is associated with decreased clearance of methotrexate in children with Precursor Cell Lymphoblastic Leukemia-Lymphoma as compared to allele C. | PMID:24404132 |
| rs3740065 | methotrexate | Metabolism/PK | Genotypes AG + GG are associated with increased plasma level when treated with methotrexate in children with Precursor Cell Lymphoblastic Leukemia-Lymphoma as compared to genotype AA. | PMID:23222202 |
| rs2273697 | carbamazepine, oxcarbazepine | Efficacy | Genotype AG is associated with resistance to carbamazepine or oxcarbazepine in people with Epilepsy as compared to genotype GG. | PMID:25155934 |
| rs2273697 | deferasirox | Metabolism/PK | Genotype AG is associated with increased concentrations of deferasirox in people with beta-Thalassemia as compared to genotype GG. | PMID:25348619 |
| rs8187710 | cyclophosphamide, epirubicin, paclitaxel | Toxicity | Allele A is associated with decreased likelihood of Peripheral Nervous System Diseases when treated with cyclophosphamide, epirubicin and paclitaxel in women with Breast Neoplasms as compared to allele G. | PMID:24599932 |
| rs17222723 | cyclophosphamide, epirubicin, paclitaxel | Toxicity | Allele A is associated with decreased likelihood of Peripheral Nervous System Diseases when treated with cyclophosphamide, epirubicin and paclitaxel in women with Breast Neoplasms as compared to allele T. | PMID:24599932 |
| rs3740065 | cyclosporine, methotrexate | Efficacy | Genotype AA is associated with increased risk of Graft vs Host Disease when treated with cyclosporine and methotrexate in people with Hematopoietic stem cell transplantation as compared to genotype AG. | PMID:25425682 |
| rs717620 | tamoxifen | Efficacy | Genotype CT is associated with increased response to tamoxifen in women Breast Neoplasms as compared to genotype CC. | PMID:27110128 |
| rs3740066 | mycophenolic acid | Metabolism/PK | Genotype CT is associated with decreased concentrations of mycophenolic acid in people with lung transplantation as compared to genotypes CC + TT. | PMID:26307985 |
| rs3740066 | vincristine | Toxicity | Allele T is associated with decreased likelihood of Neurotoxicity Syndromes when treated with vincristine in children with Precursor Cell Lymphoblastic Leukemia-Lymphoma as compared to allele C. | PMID:27180762 |
| rs12826 | vincristine | Toxicity | Allele T is associated with decreased likelihood of Neurotoxicity Syndromes when treated with vincristine in children with Precursor Cell Lymphoblastic Leukemia-Lymphoma as compared to allele C. | PMID:27180762 |
| rs717620 | sorafenib | Toxicity | Genotype CC is associated with increased risk of Exanthema when treated with sorafenib in people with Carcinoma, Renal Cell as compared to genotype CT. | PMID:23237922 |
| rs717620 | antiepileptics | Efficacy | Genotypes CT + TT are associated with increased resistance to antiepileptics in people with Epilepsy as compared to genotype CC. | PMID:27816260 |
| rs2273697 | deferasirox | Metabolism/PK | Genotype AG is associated with increased exposure to deferasirox in children with beta-Thalassemia as compared to genotype GG. | PMID:28346059 |
| rs717620 | diclofenac | Toxicity | Allele T is associated with increased likelihood of Toxic liver disease when treated with diclofenac as compared to allele C. | PMID:17241877 |
| rs8187710 | lumefantrine | Metabolism/PK | Genotype AA is associated with increased concentrations of lumefantrine in children with Malaria as compared to genotypes AG + GG. | PMID:28639487 |
| rs2273697 | mycophenolic acid | Metabolism/PK | Allele A is associated with decreased exposure to mycophenolic acid in people with Kidney Transplantation as compared to allele G. | PMID:28624888 |
| rs2273697 | mycophenolic acid | Metabolism/PK | Allele A is associated with decreased exposure to mycophenolic acid as compared to allele G. | PMID:28624888 |
| rs717620 | mycophenolic acid | Metabolism/PK | Allele T is associated with exposure to mycophenolic acid in people with Kidney Transplantation as compared to allele C. | PMID:28624888 |
| rs717620 | atorvastatin | Efficacy | Genotypes CT + TT are associated with decreased response to atorvastatin in men with Hypercholesterolemia as compared to genotype CC. | PMID:29178257 |
| rs3740066 | tacrolimus | Metabolism/PK | Genotypes CT + TT is associated with increased dose-adjusted trough concentrations of tacrolimus in people with Kidney Transplantation as compared to genotype CC. | PMID:28316087 |
| rs717620 | tacrolimus | Metabolism/PK | Genotypes CT + TT is associated with increased dose-adjusted trough concentrations of tacrolimus in people with Kidney Transplantation as compared to genotype CC. | PMID:28316087 |
| rs3740066 | tacrolimus | Metabolism/PK | Genotypes CT + TT is associated with decreased dose of tacrolimus in people with Kidney Transplantation as compared to genotype CC. | PMID:28316087 |
| rs3740066 | methotrexate | Metabolism/PK | Genotype TT is associated with decreased concentrations of methotrexate in children with Osteosarcoma as compared to genotypes CC + CT. | PMID:27566582 |
| rs2273697 | methotrexate | Toxicity | Allele A is associated with increased risk of Bone Marrow Diseases when treated with methotrexate in children with Osteosarcoma as compared to allele G. | PMID:27566582 |
| rs717620 | voriconazole | Metabolism/PK | Genotypes CT + TT is associated with increased trough concentration of voriconazole in children as compared to genotype CC. | PMID:29914286 |
| rs2273697 | cyclophosphamide, doxorubicin, fluorouracil | Toxicity | Genotype GG is associated with increased risk of Anemia when treated with cyclophosphamide, doxorubicin and fluorouracil in women with Breast Neoplasms as compared to genotypes AA + AG. | PMID:29507678 |
| rs3740066 | cyclophosphamide, doxorubicin, fluorouracil | Toxicity | Genotype TT is associated with increased risk of Neutropenia when treated with cyclophosphamide, doxorubicin and fluorouracil in women with Breast Neoplasms as compared to genotypes CC + CT. | PMID:29507678 |
| rs3740066 | cyclophosphamide, doxorubicin, fluorouracil | Toxicity | Genotypes CT + TT are associated with increased risk of Nausea when treated with cyclophosphamide, doxorubicin and fluorouracil in women with Breast Neoplasms as compared to genotype CC. | PMID:29507678 |
| rs8187692 | rosuvastatin | Metabolism/PK | Allele A is associated with increased exposure to rosuvastatin in healthy individuals as compared to allele G. | PMID:30100615 |
| rs17216198 | rosuvastatin | Metabolism/PK | Allele T is associated with decreased exposure to rosuvastatin in healthy individuals as compared to allele C. | PMID:30100615 |
| rs3740066 | rosuvastatin | Metabolism/PK | Allele T is associated with decreased exposure to rosuvastatin in healthy individuals as compared to allele C. | PMID:30100615 |
| rs7899457 | rosuvastatin | Metabolism/PK | Allele T is associated with decreased exposure to rosuvastatin in healthy individuals as compared to allele C. | PMID:30100615 |
| rs8187706 | rosuvastatin | Metabolism/PK | Allele A is associated with decreased exposure to rosuvastatin in healthy individuals as compared to allele G. | PMID:30100615 |
| rs17216177 | rosuvastatin | Metabolism/PK | Allele C is associated with decreased exposure to rosuvastatin in healthy individuals as compared to allele T. | PMID:30100615 |
| rs8187710 | rosuvastatin | Metabolism/PK | Allele A is associated with decreased exposure to rosuvastatin in healthy individuals as compared to allele G. | PMID:30100615 |
| rs717620 | mycophenolic acid | Metabolism/PK | Genotype TT is associated with increased dose-adjusted trough concentrations of mycophenolic acid in people with Kidney Transplantation as compared to genotypes CC + CT. | PMID:30345879 |
| rs717620 | simvastatin | Efficacy | Genotypes CT + TT is associated with decreased response to simvastatin in people with Hypercholesterolemia as compared to genotype CC. | PMID:30024814 |
| rs2273697 | imatinib | Efficacy | Genotype GG is associated with decreased progression-free survival when treated with imatinib in people with Gastrointestinal Stromal Tumors as compared to genotypes AA + AG. | PMID:30237583 |
| rs2273897 | emtricitabine | Metabolism/PK | Genotype TT is associated with increased concentrations of emtricitabine in people with HIV Infections and Pregnancy as compared to genotypes CC + CT. | PMID:30767719 |
| rs717620 | pitavastatin | Metabolism/PK | Allele T is associated with decreased exposure to pitavastatin in healthy individuals as compared to allele C. | PMID:23007012 |
| rs717620 | tenofovir disoproxil fumarate | Toxicity | Genotype TT is associated with increased severity of nephrotoxicity due to tenofovir disoproxil fumarate in people with HIV Infections as compared to genotypes CC + CT. | PMID:31619748 |
| rs3740065 | Drugs For Treatment Of Tuberculosis | Toxicity | Genotypes AG + GG are associated with decreased risk of Toxic liver disease due to Drugs For Treatment Of Tuberculosis in people with Tuberculosis as compared to genotype AA. | PMID:31648372 |
| rs2273697 | atorvastatin | Efficacy | Genotype AG is associated with decreased response to atorvastatin in healthy individuals as compared to genotype GG. | PMID:28435225 |
| rs717620 | methotrexate | Metabolism/PK | Genotypes CT + TT are associated with decreased concentrations of methotrexate in children with Precursor Cell Lymphoblastic Leukemia-Lymphoma as compared to genotype CC. | PMID:31870219 |
| rs717620 | methotrexate | Toxicity | Genotypes CT + TT are associated with increased risk of Leukopenia when treated with methotrexate in children with Precursor Cell Lymphoblastic Leukemia-Lymphoma as compared to genotype CC. | PMID:31870219 |
| rs717620 | cisplatin, doxorubicin, methotrexate | Efficacy | Genotypes CT + TT is associated with decreased response to cisplatin, doxorubicin and methotrexate in people with Osteosarcoma as compared to genotype CC. | PMID:21887680 |
| rs17222723 | methotrexate | Toxicity | Genotypes AT + TT are associated with increased risk of Leukopenia when treated with methotrexate in people with Osteosarcoma as compared to genotype AA. | PMID:21887680 |
| rs717620 | methotrexate | Toxicity | Genotypes CT + TT is associated with decreased discontinuation of methotrexate in people with Arthritis, Rheumatoid as compared to genotype CC. | PMID:34575187 |
| rs3740066 | anthracyclines and related substances | Toxicity | Genotype TT is associated with increased likelihood of febrile neutropenia when treated with anthracyclines and related substances in people with Soft Tissue Neoplasms and Sarcoma as compared to genotypes CC + CT. | PMID:35455734 |
| rs3740066 | anthracyclines and related substances | Efficacy | Genotype TT is associated with decreased overall survival when treated with anthracyclines and related substances in people with Soft Tissue Neoplasms and Sarcoma as compared to genotypes CC + CT. | PMID:35455734 |
| rs2273697 | anthracyclines and related substances | Efficacy | Genotypes AG + GG is associated with increased Recurrence free survival when treated with anthracyclines and related substances in people with Soft Tissue Neoplasms and Sarcoma as compared to genotype AA. | PMID:35455734 |
| rs3740066 | tacrolimus | Metabolism/PK | Genotype TT is associated with increased dose-adjusted trough concentrations of tacrolimus in people with Kidney Transplantation as compared to genotype CC. | PMID:36118414 |
| rs2273697 | lacosamide | Efficacy | Allele A is associated with increased resistance to lacosamide in children with Epilepsy as compared to allele G. | PMID:36253887 |
| rs717620 | lacosamide | Efficacy | Allele T is associated with increased resistance to lacosamide in children with Epilepsy as compared to allele C. | PMID:36253887 |
| rs2273697 | lacosamide | Metabolism/PK | Genotype GG is associated with increased concentrations of lacosamide in children with Epilepsy as compared to genotypes AA + AG. | PMID:36253887 |
| rs717620 | lacosamide | Metabolism/PK | Genotype CC is associated with increased concentrations of lacosamide in children with Epilepsy as compared to genotypes CT + TT. | PMID:36253887 |
| rs2273697 | rasagiline | Metabolism/PK | Genotype AA is associated with decreased clearance of rasagiline in healthy individuals as compared to genotypes AG + GG. | PMID:36297437 |
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: transporter — ABCC subfamily
Most potent curated ligand interactions (1 total), top 1:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| PAK-104P | Inhibition | 5.43 | pKi |
Binding affinities (BindingDB)
164 measured of 601 human assays (649 total across all organisms); most potent 50 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value | Patent |
|---|---|---|---|
| 1-(2-{4-[5-chloro-1-(4-fluorophenyl)-1H-indol-3-yl]piperidin-1-yl}ethyl)imidazolidin-2-one | KI | 0.38 nM | |
| (2S)-1-[[4-(difluoromethyl)-6-[2-(difluoromethyl)-4-pyridinyl]-3-pyridinyl]oxy]-2,4-dimethylpentan-2-amine | IC50 | 0.5 nM | US-10155760: Biaryl kinase inhibitors |
| 2,2-dimethylbutyric acid, 8-ester with (4R,6R)-6-(2-((1S,2S,6R,8S,8aR)-1,2,6,7,8,8a-hexahydro-8-hydroxy-2,6-dimethyl-1-naphthyl)ethyl)tetrahydro-4-hydroxy-2H-pyran-2-one | IC50 | 0.9 nM | |
| escitalopram | KI | 1 nM | |
| cid_1548953 | KI | 1 nM | |
| (2S)-1-[[2-(difluoromethyl)-6-[2-(difluoromethyl)-4-pyridinyl]-3-pyridinyl]oxy]-2,4-dimethylpentan-2-amine | IC50 | 1.2 nM | US-10155760: Biaryl kinase inhibitors |
| (1R)-N-(prop-2-yn-1-yl)-2,3-dihydro-1H-inden-1-amine | KI | 1.4 nM | |
| 4-[2-(tert-butylamino)-1-hydroxyethyl]-2-(hydroxymethyl)phenol | EC50 | 1.5 nM | |
| 5-[2-(4-Benzo[d]isothiazol-3-yl-piperazin-1-yl)-ethyl]-6-chloro-1,3-dihydro-indol-2-one | KI | 1.6 nM | |
| CHEMBL195 | KI | 1.6 nM | |
| (S)-4-((3-(2-(dimethylamino)ethyl)-1H-indol-5-yl)methyl)oxazolidin-2-one | KD | 1.8 nM | |
| Permax | KI | 1.91 nM | |
| 2-methyl-2-[4-(3-methyl-2-oxo-8-quinolin-3-ylimidazo[4,5-c]quinolin-1-yl)phenyl]propanenitrile | IC50 | 2 nM | US-9284315: Three-ring PI3K and/or mTOR inhibitor |
| (R)-3-methyl-1-((S)-3-phenyl-2-(pyrazine-6-carboxamido)propanamido)butylboronic acid | IC50 | 2.4 nM | |
| 5-(4-chlorophenyl)-1-(2,4-dichlorophenyl)-4-methyl-N-(piperidin-1-yl)-1H-pyrazole-3-carboxamide | KD | 2.5 nM | |
| 2-(3-CYANO-4-ISOBUTOXY-PHENYL)-4-METHYL-5-THIAZOLE-CARBOXYLIC ACID | IC50 | 2.9 nM | |
| (1S,3R,5Z,7E)-9,10-secocholesta-5,7,10(19)-triene-1,3,25-triol | EC50 | 3 nM | |
| (2-{4-[(1Z)-1,2-diphenylbut-1-en-1-yl]phenoxy}ethyl)dimethylamine | KI | 5 nM | |
| 1-(4-Amino-6,7-dimethoxy-2-quinazolinyl)-4-((tetrahydro-2-furanyl)carbonyl)piperazine | IC50 | 5 nM | |
| Staurosporine, 8 | IC50 | 6.5 nM | |
| Atorvastatin lactone | IC50 | 7 nM | |
| FCE-21336 | EC50 | 13 nM | |
| Amisulpride | KI | 13 nM | |
| 4-[5-(4-methylphenyl)-3-(trifluoromethyl)-1H-pyrazol-1-yl]benzene-1-sulfonamide | KI | 16 nM | |
| (+/-)-12-Methyl-1,2,3,4,9,13b-hexahydro-2,4a,5-triaza-tribenzo[a,c,e]cycloheptene | KI | 18 nM | |
| 2-Methyl-butyric acid 8-[2-(4-hydroxy-6-oxo-tetrahydro-pyran-2-yl)-ethyl]-7-methyl-1,2,3,7,8,8a-hexahydro-naphthalen-1-yl ester((+)-compactin) | IC50 | 23 nM | |
| (3E)-3-(6H-benzo[c][1]benzoxepin-11-ylidene)-N,N-dimethylpropan-1-amine | KI | 25 nM | US-8629135: Pharmaceutical compositions comprising RET inhibitors and methods for the treatment of cancer |
| (2-{4-[(2-butyl-1-benzofuran-3-yl)carbonyl]-2,6-diiodophenoxy}ethyl)diethylamine | KI | 25 nM | |
| CS-514 | IC50 | 30 nM | |
| 1-(4-{3-[4-(6-Fluoro-benzo[d]isoxazol-3-yl)-piperidin-1-yl]-propoxy}-3-methoxy-phenyl)-ethanone | KI | 33 nM | |
| (+/-)1-(4-tert-butylphenyl)-4-(4-(hydroxydiphenylmethyl)piperidin-1-yl)butan-1-ol | IC50 | 41 nM | |
| 1-(3-chlorophenyl)piperazine | KI | 42 nM | |
| 5-Chloro-3-(4-methanesulfonyl-phenyl)-6’’-methyl-[2,3’’]bipyridinyl | IC50 | 70 nM | |
| 2-{3-[4-(3-chlorophenyl)piperazin-1-yl]propyl}-5-ethyl-4-(2-phenoxyethyl)-2,4-dihydro-3H-1,2,4-triazol-3-one | KI | 80 nM | |
| [3-(2-Chloro-phenothiazin-10-yl)-propyl]-dimethyl-amine( Chlorpromazine) | KI | 116 nM | |
| APOKYN | KI | 117 nM | |
| N-hydroxy-N’-phenyloctanediamide | IC50 | 140 nM | |
| 8-Chloro-11-(4-methyl-piperazin-1-yl)-5H-dibenzo[b,e][1,4]diazepine(Clopazine) | IC50 | 150 nM | |
| p-aminophenyl sulfone | KI | 183 nM | |
| 4-[4-(4-Chloro-phenyl)-4-hydroxy-piperidin-1-yl]-1-(4-fluoro-phenyl)-butan-1-one;propionate(HCl) | KI | 190 nM | |
| Urapidil | KI | 213 nM | |
| Asendin | KI | 221 nM | |
| 4-amino-5-chloro-N-[2-(diethylamino)ethyl]-2-methoxy-benzamide;hydrochloride | IC50 | 280 nM | US-11147820: Methods for treating GI tract disorders |
| CHEMBL2074720 | IC50 | 280 nM | |
| NORTRIPTYLINE | KI | 294 nM | |
| N,N-dimethyl-2-[5-(1H-1,2,4-triazol-1-ylmethyl)-1H-indol-3-yl]ethanamine | IC50 | 316 nM | |
| 2-(tert-butylamino)-1-(3-chlorophenyl)propan-1-one | IC50 | 330 nM | |
| 4-chloro-N-(2-morpholin-4-ylethyl)benzamide | IC50 | 360 nM | |
| 1-Butyl-3-(p-methylphenylsulfonyl)urea | IC50 | 380 nM | |
| CHEMBL2074750 | IC50 | 400 nM |
ChEMBL bioactivities
22 potent at pChembl≥5 of 84 total, top 22 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 6.55 | IC50 | 280 | nM | BILIRUBIN MONOGLUCURONIDE |
| 6.40 | IC50 | 400 | nM | CHEMBL3038248 |
| 5.62 | IC50 | 2410 | nM | FASIGLIFAM |
| 5.51 | IC50 | 3100 | nM | CYCLOSPORINE |
| 5.48 | IC50 | 3300 | nM | LEUKOTRIEN C4 |
| 5.43 | Ki | 3700 | nM | CHEMBL2074650 |
| 5.42 | IC50 | 3850 | nM | ETHACRYNIC ACID |
| 5.40 | IC50 | 4000 | nM | MK-571 |
| 5.39 | IC50 | 4100 | nM | CYCLOSPORINE |
| 5.39 | IC50 | 4100 | nM | CHEMBL3974624 |
| 5.35 | IC50 | 4500 | nM | CHEMBL3921707 |
| 5.35 | IC50 | 4500 | nM | CHEMBL3263914 |
| 5.33 | Ki | 4700 | nM | CYCLOSPORINE |
| 5.32 | IC50 | 4800 | nM | CHEMBL3263916 |
| 5.20 | IC50 | 6300 | nM | CHEMBL3263915 |
| 5.14 | IC50 | 7300 | nM | CHEMBL3964042 |
| 5.11 | IC50 | 7800 | nM | ETRAVIRINE |
| 5.09 | Ki | 8110 | nM | CYCLOSPORINE |
| 5.09 | IC50 | 8200 | nM | CHEMBL3945493 |
| 5.05 | IC50 | 9000 | nM | CHEMBL3263569 |
| 5.00 | IC50 | 1e+04 | nM | ERLOTINIB |
| 5.00 | IC50 | 1e+04 | nM | MK-571 |
PubChem BioAssay actives
21 with measured affinity, of 1190 total; 18 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| (5S,6R,7E,9E,11Z,14Z)-6-[(2S)-2-[[(4S)-4-amino-4-carboxybutanoyl]amino]-3-(carboxymethylamino)-3-oxopropyl]sulfanyl-5-hydroxyicosa-7,9,11,14-tetraenoic acid | 370719: Inhibition of ABCC2 overexpressed in MDCK cells at 100 uM by flow cytometric-based chloromethylfluorescein-diacetate accumulation assay | ic50 | 0.1500 | uM |
| (3S,6S)-6-[3-[2-[[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxopyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-2-yl]methyl]-5-[(Z)-(3-ethenyl-4-methyl-5-oxopyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-3-yl]propanoyloxy]-3,4,5-trihydroxyoxane-2-carboxylic acid | 679667: TP_TRANSPORTER: inhibition of LTC4 uptake (LTC4: 0.05 uM) in HepG2 cells | ic50 | 0.2800 | uM |
| (2S,3R,4S,5S,6S)-6-[3-[2-[[3-[3-[(2S,3S,4R,5R,6R)-6-carboxy-3,4,5-trihydroxyoxan-2-yl]oxy-3-oxopropyl]-5-[(Z)-(3-ethenyl-4-methyl-5-oxopyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-2-yl]methyl]-5-[(Z)-(4-ethenyl-3-methyl-5-oxopyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-3-yl]propanoyloxy]-3,4,5-trihydroxyoxane-2-carboxylic acid | 679667: TP_TRANSPORTER: inhibition of LTC4 uptake (LTC4: 0.05 uM) in HepG2 cells | ic50 | 0.4000 | uM |
| 2-[(3S)-6-[[3-[2,6-dimethyl-4-(3-methylsulfonylpropoxy)phenyl]phenyl]methoxy]-2,3-dihydro-1-benzofuran-3-yl]acetic acid | 1418809: Inhibition of human MRP2 | ic50 | 2.4100 | uM |
| 2-(4-benzhydrylpiperazin-1-yl)ethyl 5-[(4R,6R)-4,6-dimethyl-2-oxo-1,3,2lambda5-dioxaphosphinan-2-yl]-2,6-dimethyl-4-(3-nitrophenyl)pyridine-3-carboxylate | 678981: TP_TRANSPORTER: inhibition of LTC4 uptake in membrane vesicles from MRP2-expressing LLC PK1 cells | ki | 3.7000 | uM |
| Ethacrynic Acid | 1473739: Inhibition of human MRP2 overexpressed in Sf9 cell membrane vesicles assessed as uptake of [3H]-estradiol-17beta-D-glucuronide in presence of ATP and GSH measured after 20 mins by membrane vesicle transport assay | ic50 | 3.8500 | uM |
| 3-[[3-[(E)-2-(7-chloroquinolin-2-yl)ethenyl]phenyl]-[3-(dimethylamino)-3-oxopropyl]sulfanylmethyl]sulfanylpropanoic acid | 680797: TP_TRANSPORTER: inhibition of PAH uptake (PAH: 0.1uM) in membrane vesicles from MRP2-expressing HEK cells | ic50 | 4.0000 | uM |
| (2Z)-2-[[1-(cyclohexylmethyl)-5-methoxyindol-3-yl]methylidene]-4,6-dihydroxy-1-benzofuran-3-one | 1327018: Inhibition of ABCC2 (unknown origin) expressed in MDCK2 cells assessed as inhibition of calcein-AM efflux measured after 30 mins in presence of ABCB1 inhibitor GF120918 and ABCC1 inhibitor MK-571 by flow cytometry | ic50 | 4.1000 | uM |
| (2Z)-2-[(5-bromo-1-methylindol-3-yl)methylidene]-4,6-dihydroxy-1-benzofuran-3-one | 1327018: Inhibition of ABCC2 (unknown origin) expressed in MDCK2 cells assessed as inhibition of calcein-AM efflux measured after 30 mins in presence of ABCB1 inhibitor GF120918 and ABCC1 inhibitor MK-571 by flow cytometry | ic50 | 4.5000 | uM |
| (2Z)-2-[(1-butyl-7-methylindol-3-yl)methylidene]-4,6-dihydroxy-1-benzofuran-3-one | 1327018: Inhibition of ABCC2 (unknown origin) expressed in MDCK2 cells assessed as inhibition of calcein-AM efflux measured after 30 mins in presence of ABCB1 inhibitor GF120918 and ABCC1 inhibitor MK-571 by flow cytometry | ic50 | 4.5000 | uM |
| cyclosporine | 678981: TP_TRANSPORTER: inhibition of LTC4 uptake in membrane vesicles from MRP2-expressing LLC PK1 cells | ki | 4.7000 | uM |
| (2Z)-2-[(1-butyl-5-methylindol-3-yl)methylidene]-4,6-dihydroxy-1-benzofuran-3-one | 1327018: Inhibition of ABCC2 (unknown origin) expressed in MDCK2 cells assessed as inhibition of calcein-AM efflux measured after 30 mins in presence of ABCB1 inhibitor GF120918 and ABCC1 inhibitor MK-571 by flow cytometry | ic50 | 4.8000 | uM |
| (2Z)-2-[(1-butyl-7-methoxyindol-3-yl)methylidene]-4,6-dihydroxy-1-benzofuran-3-one | 1327018: Inhibition of ABCC2 (unknown origin) expressed in MDCK2 cells assessed as inhibition of calcein-AM efflux measured after 30 mins in presence of ABCB1 inhibitor GF120918 and ABCC1 inhibitor MK-571 by flow cytometry | ic50 | 6.3000 | uM |
| (2Z)-2-[[1-[(3-bromophenyl)methyl]-5-methoxyindol-3-yl]methylidene]-4,6-dihydroxy-1-benzofuran-3-one | 1327018: Inhibition of ABCC2 (unknown origin) expressed in MDCK2 cells assessed as inhibition of calcein-AM efflux measured after 30 mins in presence of ABCB1 inhibitor GF120918 and ABCC1 inhibitor MK-571 by flow cytometry | ic50 | 7.3000 | uM |
| Etravirine | 586880: Inhibition of MRP2 expressed in MDCK2 cells assessed as cell growth inhibition by calcein and pheophorbide A efflux assays | ic50 | 7.8000 | uM |
| (2Z)-2-[(1-butyl-3-methylindol-2-yl)methylidene]-4,6-dihydroxy-1-benzofuran-3-one | 1327018: Inhibition of ABCC2 (unknown origin) expressed in MDCK2 cells assessed as inhibition of calcein-AM efflux measured after 30 mins in presence of ABCB1 inhibitor GF120918 and ABCC1 inhibitor MK-571 by flow cytometry | ic50 | 8.2000 | uM |
| (2Z)-2-[(1-butylindol-2-yl)methylidene]-4,6-dihydroxy-1-benzofuran-3-one | 1327018: Inhibition of ABCC2 (unknown origin) expressed in MDCK2 cells assessed as inhibition of calcein-AM efflux measured after 30 mins in presence of ABCB1 inhibitor GF120918 and ABCC1 inhibitor MK-571 by flow cytometry | ic50 | 9.0000 | uM |
| Erlotinib | 699529: Inhibition of human MRP2 | ic50 | 10.0000 | uM |
CTD chemical–gene interactions
303 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Cisplatin | decreases reaction, increases response to substance, decreases response to substance, increases expression, decreases expression (+4 more) | 20 |
| verlukast | decreases reaction, increases export, increases transport, affects cotreatment, increases uptake (+4 more) | 13 |
| estradiol-17 beta-glucuronide | increases uptake, increases reaction, decreases activity, affects localization, decreases reaction (+4 more) | 11 |
| sodium arsenite | increases abundance, increases expression, increases reaction, decreases response to substance, affects expression | 10 |
| Cyclosporine | decreases reaction, increases transport, decreases activity, affects transport, increases abundance (+3 more) | 10 |
| Methotrexate | affects metabolic processing, decreases response to substance, decreases reaction, increases expression, affects response to substance (+4 more) | 9 |
| Rifampin | affects export, affects cotreatment, increases expression | 9 |
| Acetaminophen | affects activity, increases transport, affects cotreatment, decreases expression, increases expression | 7 |
| 5(6)-carboxy-2’,7’-dichlorofluorescein | increases uptake, increases export, increases reaction, decreases reaction, increases transport (+1 more) | 6 |
| Probenecid | decreases reaction, increases export, affects transport, increases reaction, decreases response to substance (+2 more) | 6 |
| sulforaphane | increases expression | 5 |
| ochratoxin A | affects export, affects transport, decreases reaction, decreases expression, decreases activity (+1 more) | 5 |
| calcein AM | affects transport, increases export, increases transport, decreases reaction, increases expression | 5 |
| Benzo(a)pyrene | decreases expression, increases expression, increases methylation | 5 |
| Indomethacin | increases abundance, affects export, affects transport, increases reaction, decreases activity (+2 more) | 5 |
| Phenobarbital | affects expression, increases expression | 5 |
| Resveratrol | affects binding, increases reaction, increases expression, decreases expression, affects export (+1 more) | 4 |
| Arsenic Trioxide | decreases response to substance, decreases expression, increases expression | 4 |
| Adenosine Triphosphate | affects metabolic processing, affects activity, increases transport, affects reaction, affects cotreatment (+2 more) | 4 |
| Lithocholic Acid | increases expression, decreases activity, increases abundance, decreases expression, increases activity | 4 |
| Mercury | increases transport, affects reaction, affects abundance, affects response to substance, affects cotreatment (+1 more) | 4 |
| Aflatoxin B1 | decreases methylation, decreases reaction, affects expression, affects cotreatment, decreases expression (+1 more) | 4 |
| Paclitaxel | affects response to substance, affects transport, decreases response to substance, increases export, decreases reaction (+2 more) | 4 |
| Leukotriene C4 | affects transport, decreases reaction, increases transport | 4 |
| beta-Naphthoflavone | increases expression | 4 |
| Genistein | increases expression, affects export, affects binding, increases reaction, increases activity (+1 more) | 4 |
| bisphenol A | affects expression, affects methylation, affects cotreatment, increases methylation, increases expression | 3 |
| fluorexon | affects transport, increases abundance, decreases reaction, affects export | 3 |
| arsenite | affects transport, increases expression, increases abundance, decreases reaction, affects reaction (+1 more) | 3 |
| oltipraz | increases expression | 3 |
ChEMBL screening assays
159 unique, capped per target: 84 functional, 40 admet, 35 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL2075613 | Functional | TP_TRANSPORTER: transepithelial transport (basal to apical) of Phalloidin at a concentration of 1 uM in MRP2- and OATP-C-expressing MDCKII cells | Characterization of the transport of the bicyclic peptide phalloidin by human hepatic transport proteins. — *Naunyn Schmiedebergs Arch Pharmacol* |
| CHEMBL1006005 | Binding | Effect on human MRP2-mediated estradiol-17-beta-glucuronide transport in Sf9 cells inverted membrane vesicles relative to control | Prediction and identification of drug interactions with the human ATP-binding cassette transporter multidrug-resistance associated protein 2 (MRP2; ABCC2). — *J Med Chem* |
| CHEMBL1743160 | ADMET | Substrates of transporters of clinical importance in the absorption and disposition of drugs, MRP2 | Membrane transporters in drug development. — *Nat Rev Drug Discov* |
Cellosaurus cell lines
9 cell lines: 6 cancer cell line, 3 spontaneously immortalized cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_9U72 | MDCKII-MRP2/UGT1A1 | Spontaneously immortalized cell line | Female |
| CVCL_A2JY | MDCK2-ABCC2 | Spontaneously immortalized cell line | Female |
| CVCL_B2M0 | Abcam A-549 ABCC2 KO | Cancer cell line | Male |
| CVCL_B5ZV | C2BBe1 MRP2 KO | Cancer cell line | Male |
| CVCL_B5ZW | C2BBe1 MDR1/MRP2 KO | Cancer cell line | Male |
| CVCL_B5ZX | C2BBe1 MRP2/BCRP KO | Cancer cell line | Male |
| CVCL_B6AG | HepaRG MRP2 KO | Cancer cell line | Female |
| CVCL_B6AH | HepaRG MRP2/MRP4 KO | Cancer cell line | Female |
| CVCL_X022 | MDCK-MRP2 | Spontaneously immortalized cell line | Female |
Clinical trials (associated diseases)
Via MONDO — disease-level, not drug-specific.
28 trials:
| NCT | Phase | Status | Title |
|---|---|---|---|
| NCT05832580 | Phase 3 | RECRUITING | The Prevention of Systemic Ectopic Mineralization in Pseudoxanthoma Elasticum |
| NCT01525875 | Phase 2 | COMPLETED | Magnesium Supplements In The Treatment Of Pseudoxanthoma Elasticum (PXE) |
| NCT02537054 | Phase 2 | COMPLETED | Intravitreal Aflibercept for Therapy of Patients With Pseudoxanthoma Elasticum (PXE) |
| NCT04441671 | Phase 2 | WITHDRAWN | Oral Pyrophosphate Absorption in PXE Disease |
| NCT05569252 | Phase 2 | COMPLETED | A Study of DS-1211b in Individuals With PseudoXanthoma Elasticum |
| NCT06462547 | Phase 2 | ACTIVE_NOT_RECRUITING | ADAPT Study: Long-term Safety Study of INZ-701 in Patients With ENPP1 Deficiency and ABCC6 Deficiency |
| NCT05734196 | Phase 1 | ACTIVE_NOT_RECRUITING | The ENERGY Study: Evaluation of Safety and Tolerability of INZ-701 in Infants With ENPP1 Deficiency or ABCC6 Deficiency |
| NCT00470977 | Phase 1/2 | COMPLETED | Treatment of Exudative and Vasogenic Chorioretinal Diseases Including Variants of AMD and Other CNV Related Maculopathy |
| NCT05030831 | Phase 1/2 | COMPLETED | Evaluation of Safety, Tolerability, and Efficacy of INZ-701 in Adults With ABCC6 Deficiency Causing PXE |
| NCT00341419 | Not specified | COMPLETED | Genetic Analysis of Patients With Pseudoxanthoma Elasticum |
| NCT00555113 | Not specified | COMPLETED | Evolution of Visual Impairment During Pseudoxanthoma Elasticum |
| NCT01446380 | Not specified | UNKNOWN | Phenotypic Expressions in a French Pseudoxanthoma-Elasticum Cohort |
| NCT01446393 | Not specified | COMPLETED | Functional and Structural Characterization of Arteriopathy in Pseudoxanthoma Elasticum (PXE) |
| NCT01731080 | Not specified | UNKNOWN | Arterial Wall Calcium Load in Pseudoxanthoma Elasticum |
| NCT02108392 | Not specified | UNKNOWN | Characterization of Pseudoxanthoma Elasticum |
| NCT03070860 | Not specified | COMPLETED | What’s Happen Under the Calcification Process in Pseudoxanthoma Elasticum |
| NCT03364504 | Not specified | UNKNOWN | Biological Collection of Kidney Cells |
| NCT03758534 | Not specified | UNKNOWN | Natural History of GACI With or Without ARHR2 or PXE |
| NCT03813550 | Not specified | UNKNOWN | Intestinal Microbiota and Vitamin K Levels in PXE Patients (IMPROVE Study) |
| NCT04868578 | Not specified | RECRUITING | PPI Supplementation to Fight ECtopIc Calcification in PXE |
| NCT05025722 | Not specified | COMPLETED | Pseudoxanthoma Elasticum (PXE) Natural History Biomarkers in PXE Individuals and Their Biological Non-PXE Siblings |
| NCT05246189 | Not specified | COMPLETED | Employment of Patients With Pseudoxanthoma Elasticum |
| NCT05662085 | Not specified | ACTIVE_NOT_RECRUITING | Progression Rate of Pseudoxanthoma Elasticum-associated Choroidal and Retinal Degeneration |
| NCT06636344 | Not specified | RECRUITING | Impact of Optimized Recruitment and Follow-up of Patients With Pseudoxanthoma Elasticum (PXE) |
| NCT07006649 | Not specified | RECRUITING | CHOPXE - Analysis of Choriocapillaris Flow Deficits in Patients With Pseudoxanthoma Elasticum |
| NCT07048106 | Not specified | RECRUITING | Progression Assessment of PXE-associated Alterations |
| NCT07323082 | Not specified | RECRUITING | Purinergic Compounds in Pseudoxanthoma Elasticum |
| NCT07745179 | Not specified | COMPLETED | Natural History Study: ENPP1 Deficiency or the Early-Onset Form of ABCC6 Deficiency |
Predicted chemistry — Sugi Predict
The predicted patent-compound landscape for ABCC2 across ~30M SureChEMBL compounds — explore on Sugi Predict.
Related Atlas pages
- Associated diseases: Dubin-Johnson syndrome
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): autosomal recessive inherited pseudoxanthoma elasticum, Dubin-Johnson syndrome
- Pharmacogenomically associated drugs (drugs whose metabolism/response is associated with variants in this gene (PharmGKB) — not drugs that target it): Apixaban, Atazanavir, Atorvastatin, Carbamazepine, Ceftriaxone, Clopidogrel, Cyclophosphamide Anhydrous, Daunorubicin, Diclofenac, Docetaxel Anhydrous, Doxorubicin, Efavirenz, Emtricitabine, Epirubicin, Erythromycin, Eslicarbazepine, Fluorouracil, Imatinib, Irinotecan, Lacosamide, Lopinavir, Lumefantrine, Methotrexate, Mycophenolate Mofetil, Mycophenolic Acid, Oxcarbazepine, Paclitaxel, Pitavastatin, Pravastatin, Rasagiline, Ritonavir, Simvastatin, Sorafenib, Tacrolimus Anhydrous, Tamoxifen, Tenofovir Anhydrous, Vincristine, Voriconazole