ABCC5-AS1

Summary

ABCC5-AS1 (ABCC5 antisense RNA 1, HGNC:40055) is a long non-coding RNA gene on chromosome 3q27.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40055
Approved symbol	ABCC5-AS1
Name	ABCC5 antisense RNA 1
Location	3q27.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000223882
Ensembl biotype	lncRNA
Entrez	100873982
RNAcentral	URS0000221CD6 — lncRNA, 469 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000422946

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000422946 — 3 exons

Exon	Start	End
ENSE00001627084	184010451	184010641
ENSE00001736506	184006338	184006461
ENSE00001750888	184011266	184011419

Expression profiles

Bgee: expression breadth ubiquitous, 108 present calls, max score 67.94.

Top tissues by expression

108 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
ganglionic eminence	UBERON:0004023	67.94	gold quality
skeletal muscle tissue	UBERON:0001134	65.50	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	65.13	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	64.02	gold quality
lymph node	UBERON:0000029	63.17	gold quality
adrenal tissue	UBERON:0018303	63.05	gold quality
hindlimb stylopod muscle	UBERON:0004252	61.54	gold quality
islet of Langerhans	UBERON:0000006	59.33	gold quality
bone marrow	UBERON:0002371	58.98	gold quality
descending thoracic aorta	UBERON:0002345	58.01	gold quality
primary visual cortex	UBERON:0002436	57.77	gold quality
corpus callosum	UBERON:0002336	56.80	gold quality
right uterine tube	UBERON:0001302	56.44	gold quality
placenta	UBERON:0001987	55.57	gold quality
blood	UBERON:0000178	55.53	gold quality
calcaneal tendon	UBERON:0003701	55.25	gold quality
smooth muscle tissue	UBERON:0001135	53.00	gold quality
muscle of leg	UBERON:0001383	52.91	gold quality
fallopian tube	UBERON:0003889	52.61	gold quality
liver	UBERON:0002107	52.11	gold quality
monocyte	CL:0000576	51.94	silver quality
gastrocnemius	UBERON:0001388	51.69	gold quality
kidney	UBERON:0002113	51.33	gold quality
rectum	UBERON:0001052	50.72	gold quality
endometrium	UBERON:0001295	50.16	gold quality
stomach	UBERON:0000945	49.81	gold quality
tonsil	UBERON:0002372	49.02	gold quality
right coronary artery	UBERON:0001625	48.95	gold quality
right lung	UBERON:0002167	48.77	gold quality
adrenal gland	UBERON:0002369	48.65	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.95

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.