ABCF1-DT

Summary

ABCF1-DT (ABCF1 divergent transcript, HGNC:53628) is a long non-coding RNA gene on chromosome 6p21.33.

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:53628
Approved symbol	ABCF1-DT
Name	ABCF1 divergent transcript
Location	6p21.33
Locus type	RNA, long non-coding
Status	Approved
Entrez	107986587

Gene structure

Transcript identifiers

Ensembl transcripts: 0

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

None — 0 exons

Expression profiles

Top tissues by expression

0 total, by Bgee expression score (0-100, higher = more expressed):

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Protein identifiers

Canonical reviewed UniProt: None (reviewed: )

All UniProt accessions (0):

RefSeq proteins (0): (*=MANE)

Domains & families (InterPro)

Structure

Experimental structures (PDB)

0 structures.

Predicted structure (AlphaFold)

Function

Pathways and Gene Ontology

Reactome pathways

0 pathways

MSigDB gene sets: 0 (showing top):

GO Biological Process (0):

GO Molecular Function (0):

GO Cellular Component (0):

Protein interactions and networks

STRING

0 interactions, top by confidence (×1000):

IntAct

0 interactions, top by confidence:

SIGNOR signaling

0 interactions.

Disease & clinical

Clinical variants and AI predictions

ClinVar

0 variants total. Per-class counts are floors (≥ shown; pagination cap):

Classification	Count (floor)
Pathogenic	0
Likely pathogenic	0
Uncertain significance	0
Likely benign	0
Benign	0

Top pathogenic / likely-pathogenic (0)

SpliceAI

0 predictions. Top by Δscore:

AlphaMissense

0 scored. Top likely-pathogenic:

dbSNP variants (sampled 300 via entrez): RS1000177520 (6:30570431 A>G), RS1000462579 (6:30568914 A>C), RS1000479834 (6:30564292 G>C), RS1000605473 (6:30568629 T>G), RS1000821115 (6:30573207 C>T), RS1000836531 (6:30566753 G>GT), RS1000888750 (6:30566506 G>C), RS1001452460 (6:30565432 G>C,T), RS1002293775 (6:30566433 T>C), RS1002327618 (6:30572805 G>C), RS1002621396 (6:30572410 G>A,T), RS1002839973 (6:30570038 G>T), RS1003341755 (6:30564945 T>C), RS1003787486 (6:30566751 T>A,G), RS1003813085 (6:30564803 A>G)

Disease associations

OMIM: gene `` | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

0 associations (top):

Drugs & pharmacology

Drug and pharmacology data

Is drug target: no

PharmGKB: 0 entries

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.