ABCG2
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Also known as EST157481MXRBCRPABCPCD338
Summary
ABCG2 (ATP binding cassette subfamily G member 2 (JR blood group), HGNC:74) is a protein-coding gene on chromosome 4q22.1, encoding Broad substrate specificity ATP-binding cassette transporter ABCG2 (Q9UNQ0). Broad substrate specificity ATP-dependent transporter of the ATP-binding cassette (ABC) family that actively extrudes a wide variety of physiological compounds, dietary toxins and xenobiotics from cells.
The membrane-associated protein encoded by this gene is included in the superfamily of ATP-binding cassette (ABC) transporters. ABC proteins transport various molecules across extra- and intra-cellular membranes. ABC genes are divided into seven distinct subfamilies (ABC1, MDR/TAP, MRP, ALD, OABP, GCN20, White). This protein is a member of the White subfamily. Alternatively referred to as a breast cancer resistance protein, this protein functions as a xenobiotic transporter which may play a major role in multi-drug resistance. It likely serves as a cellular defense mechanism in response to mitoxantrone and anthracycline exposure. Significant expression of this protein has been observed in the placenta, which may suggest a potential role for this molecule in placenta tissue. Multiple transcript variants encoding different isoforms have been found for this gene.
Source: NCBI Gene 9429 — RefSeq curated summary.
At a glance
- GWAS associations: 96
- Clinical variants (ClinVar): 97 total — 14 pathogenic, 1 likely-pathogenic
- Phenotypes (HPO): 5
- Druggable target: yes — 92 molecules with ChEMBL bioactivity
- MANE Select transcript:
NM_004827
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:74 |
| Approved symbol | ABCG2 |
| Name | ATP binding cassette subfamily G member 2 (JR blood group) |
| Location | 4q22.1 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | EST157481, MXR, BCRP, ABCP, CD338 |
| Ensembl gene | ENSG00000118777 |
| Ensembl biotype | protein_coding |
| OMIM | 603756 |
| Entrez | 9429 |
Gene structure
Transcript identifiers
Ensembl transcripts: 31 — 31 protein_coding
ENST00000237612, ENST00000503830, ENST00000505480, ENST00000515655, ENST00000650821, ENST00000889078, ENST00000889079, ENST00000889080, ENST00000889081, ENST00000889082, ENST00000889083, ENST00000889084, ENST00000889085, ENST00000889086, ENST00000889087, ENST00000889088, ENST00000889089, ENST00000889090, ENST00000889091, ENST00000889092, ENST00000889093, ENST00000889094, ENST00000889095, ENST00000889096, ENST00000889097, ENST00000889098, ENST00000889099, ENST00000889100, ENST00000962213, ENST00000962214, ENST00000962215
RefSeq mRNA: 7 — MANE Select: NM_004827
NM_001257386, NM_001348985, NM_001348986, NM_001348987, NM_001348988, NM_001348989, NM_004827
CCDS: CCDS3628, CCDS58910
Canonical transcript exons
ENST00000237612 — 16 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000801180 | 88095520 | 88095609 |
| ENSE00000801181 | 88097453 | 88097607 |
| ENSE00000801182 | 88099324 | 88099448 |
| ENSE00000801183 | 88101230 | 88101319 |
| ENSE00000801184 | 88107184 | 88107266 |
| ENSE00000801185 | 88113303 | 88113553 |
| ENSE00000801186 | 88114957 | 88115058 |
| ENSE00000801187 | 88118109 | 88118260 |
| ENSE00000801188 | 88121635 | 88121792 |
| ENSE00000801189 | 88131061 | 88131213 |
| ENSE00000801190 | 88131803 | 88131917 |
| ENSE00000801191 | 88132576 | 88132635 |
| ENSE00001196220 | 88090269 | 88092381 |
| ENSE00001342969 | 88158386 | 88158639 |
| ENSE00003465456 | 88139793 | 88140014 |
| ENSE00003501294 | 88094577 | 88094659 |
Expression profiles
Bgee: expression breadth ubiquitous, 245 present calls, max score 98.97.
FANTOM5 (CAGE): breadth broad, TPM avg 4.4675 / max 251.9052, expressed in 755 samples.
FANTOM5 promoters (16 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 53072 | 1.3827 | 451 |
| 53070 | 1.1039 | 397 |
| 53066 | 0.4975 | 171 |
| 53069 | 0.3850 | 139 |
| 53076 | 0.3049 | 124 |
| 53067 | 0.2214 | 126 |
| 53071 | 0.1631 | 70 |
| 53075 | 0.1283 | 47 |
| 53068 | 0.1024 | 57 |
| 53078 | 0.0481 | 15 |
Top tissues by expression
290 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| jejunal mucosa | UBERON:0000399 | 98.97 | gold quality |
| ileal mucosa | UBERON:0000331 | 98.67 | gold quality |
| endothelial cell | CL:0000115 | 95.45 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 94.43 | gold quality |
| seminal vesicle | UBERON:0000998 | 94.20 | gold quality |
| duodenum | UBERON:0002114 | 93.87 | gold quality |
| substantia nigra | UBERON:0002038 | 87.82 | gold quality |
| medial globus pallidus | UBERON:0002477 | 87.80 | gold quality |
| colonic mucosa | UBERON:0000317 | 87.50 | gold quality |
| placenta | UBERON:0001987 | 87.32 | gold quality |
| midbrain | UBERON:0001891 | 87.31 | gold quality |
| C1 segment of cervical spinal cord | UBERON:0006469 | 87.00 | gold quality |
| inferior vagus X ganglion | UBERON:0005363 | 86.89 | gold quality |
| subthalamic nucleus | UBERON:0001906 | 86.88 | gold quality |
| spinal cord | UBERON:0002240 | 85.98 | gold quality |
| globus pallidus | UBERON:0001875 | 85.81 | gold quality |
| dorsal motor nucleus of vagus nerve | UBERON:0002870 | 85.53 | gold quality |
| postcentral gyrus | UBERON:0002581 | 85.52 | gold quality |
| putamen | UBERON:0001874 | 85.06 | gold quality |
| rectum | UBERON:0001052 | 85.03 | gold quality |
| caudate nucleus | UBERON:0001873 | 85.00 | gold quality |
| prefrontal cortex | UBERON:0000451 | 84.87 | gold quality |
| lateral nuclear group of thalamus | UBERON:0002736 | 84.87 | gold quality |
| Ammon’s horn | UBERON:0001954 | 84.66 | gold quality |
| hypothalamus | UBERON:0001898 | 84.63 | gold quality |
| mucosa of sigmoid colon | UBERON:0004993 | 84.53 | gold quality |
| medulla oblongata | UBERON:0001896 | 83.88 | gold quality |
| parietal lobe | UBERON:0001872 | 83.83 | gold quality |
| amygdala | UBERON:0001876 | 83.69 | gold quality |
| superior vestibular nucleus | UBERON:0007227 | 83.32 | gold quality |
Single-cell (SCXA)
Detected in 8 experiment(s), a significant marker in 7.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-MTAB-6819 | yes | 387.44 |
| E-MTAB-10018 | yes | 209.80 |
| E-MTAB-6701 | yes | 45.98 |
| E-GEOD-135922 | yes | 45.47 |
| E-MTAB-9388 | yes | 7.38 |
| E-GEOD-137537 | yes | 6.21 |
| E-MTAB-2983 | no | 495.00 |
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): AHR, E2F1, ESR1, ESR2, FOXC1, GLI1, HIF1A, KLF5, MSX2, NFE2L2, NFKB1, NFKB, NR1I2, NR3C1, PGR, PPARA, PPARG, RARA, RELA, SALL4, SMAD2, SMARCA4, SP1, SP3, TP53
miRNA regulators (miRDB)
104 targeting ABCG2, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-6873-3P | 100.00 | 71.42 | 2626 |
| HSA-MIR-6833-3P | 100.00 | 70.63 | 3197 |
| HSA-MIR-3163 | 100.00 | 77.23 | 8605 |
| HSA-MIR-4768-5P | 100.00 | 69.49 | 2861 |
| HSA-MIR-5011-5P | 100.00 | 83.46 | 5820 |
| HSA-MIR-4747-5P | 100.00 | 67.90 | 2681 |
| HSA-MIR-5196-5P | 100.00 | 67.98 | 2761 |
| HSA-MIR-196A-1-3P | 99.99 | 72.15 | 2772 |
| HSA-MIR-186-5P | 99.99 | 70.83 | 3707 |
| HSA-MIR-12136 | 99.98 | 72.81 | 5713 |
| HSA-MIR-5696 | 99.98 | 72.36 | 4487 |
| HSA-MIR-548N | 99.98 | 71.94 | 4170 |
| HSA-MIR-4482-3P | 99.98 | 72.50 | 3147 |
| HSA-MIR-512-3P | 99.97 | 67.35 | 1049 |
| HSA-MIR-302E | 99.96 | 70.74 | 2669 |
| HSA-MIR-570-3P | 99.96 | 72.41 | 4910 |
| HSA-MIR-548AT-5P | 99.96 | 70.83 | 2666 |
| HSA-MIR-3143 | 99.93 | 71.96 | 3104 |
| HSA-MIR-218-5P | 99.93 | 72.22 | 2103 |
| HSA-MIR-3119 | 99.92 | 71.34 | 2390 |
| HSA-MIR-3529-3P | 99.90 | 73.55 | 3045 |
| HSA-MIR-302A-3P | 99.89 | 71.23 | 1777 |
| HSA-MIR-302B-3P | 99.89 | 71.23 | 1777 |
| HSA-MIR-302C-3P | 99.89 | 71.20 | 1778 |
| HSA-MIR-302D-3P | 99.89 | 71.25 | 1777 |
| HSA-MIR-7845-5P | 99.88 | 64.88 | 771 |
| HSA-MIR-12119 | 99.87 | 68.35 | 1653 |
| HSA-MIR-579-3P | 99.86 | 71.66 | 3628 |
| HSA-MIR-520E-3P | 99.84 | 70.55 | 1698 |
| HSA-MIR-373-3P | 99.84 | 70.68 | 1668 |
Literature-anchored findings (GeneRIF, showing 40)
- role in transport of 7-ethyl-10-hydroxycamptothecin (SN-38) in human lung cancer cells (PMID:11688982)
- ABCG2 protein effluxes hoechst 33342 in hematopoietic stem cells (PMID:11801536)
- homodimer formation is essential for BCRP drug resistance (PMID:11807788)
- There is no indication that elevated BCRP expression in breast carcinomas confers resistance to anthracyclines. (PMID:11948115)
- Increased expression in relapsed or refractory acute myeloid leukemia compared to level at diagnosis. (PMID:11986944)
- Expression of the BCRP gene reduces the response to chemotherapy in AML and that BCRP expression is higher at the time of relapse. (PMID:12145683)
- Overexpression of wild-type breast cancer resistance protein mediates methotrexate resistance. (PMID:12208758)
- involvement of ABCG2 in multidrug resistance in cancer, especially with regard to acute myeloid leukemia (PMID:12369998)
- characterization of different isoforms without possible endogenous dimerization partners (PMID:12374800)
- ABCG2 expression conferred resistance to mitoxantrone & topotecan, but not to idarubicin. High levels of ABCG2 mRNA expression in adult AML blast specimens are relatively uncommon. ABCG2 expression may be limited to a small cell subpopulation. (PMID:12393637)
- The breast cancer resistance protein protects against pheophorbide a, a major chlorophyll-derived dietary phototoxin, and protoporphyria. (PMID:12429862)
- In both normal and tumour brain tissue, BCRP is located at the blood-brain barrier, mainly at the luminal surface of microvessel endothelium. It may pose an additional barrier to drug access to the brain. (PMID:12438926)
- results showed that ABCG2 confers resistance to indolocarbazoles by transporting them in an energy-dependent manner (PMID:12459192)
- polymorphisms in BCRP1 result in low amounts of BCRP, which results in hypersensitivity of normal cells to such anticancer drugs as irinotecan and mitoxantrone (PMID:12479221)
- RNA expression of this protein in breast cancer correlates with response to chemotherapy. (PMID:12576456)
- Function of the ABC transporters, P-gp, multidrug resistance protein and BCRP, in minimal residual disease in acute myeloid leukemia (PMID:12604403)
- BCRP may play a role in the transport of sterols in human, in addition to its ability to transport multiple drugs and toxins. (PMID:12668685)
- transports sulfated conjugates of steroids and xenobiotics (PMID:12682043)
- functional study on polymorphism and determination of critical role of arginine-482 in methotrexate transport (PMID:12741957)
- Wld-type as well as R482T BCRP mediates cellular efflux of 9-AC but not 9-NC. Zplar groups at the 9 or 10 position of the CPT A ring facilitate interaction with BCRP. (PMID:12810652)
- ABCG2 is a component of the energy-dependent efflux system for certain folates and antifolates. (PMID:12874005)
- ABCG2 is expressed and functions as a transporter in the brain. (PMID:12958161)
- Single amino acid substitutions in the transmembrane domains of breast cancer resistance protein (BCRP) alter cross resistance patterns in transfectants (PMID:14566825)
- REVIEW: multidrug resistance in breast cancer (PMID:14576842)
- Higher ABCG2 expression is associated with T-lineage acute lymphoblastic leukemia (PMID:14613996)
- human ABCG2 likely exists and functions as a homotetramer (PMID:15001581)
- BCRP may serve as a molecular target for reducing drug resistance to chemotherapy in advanced lung cancer patients. (PMID:15014021)
- VX-710 modulates Pgp, MRP-1, and BCRP(R482), and has potential as a clinical broad-spectrum multidrug resistance modulator in malignancies. (PMID:15014037)
- ABCG2 overexpression is associated with drug resistance to SN38 in colon cancer cells and in irinotecan-treated metastases (PMID:15027118)
- Bcrp/ABCG2 enhances hypoxic cell survival through interactions with heme (PMID:15044468)
- subcellular localization of ABCG2 in gallbladder adenocarcinoma (PMID:15146167)
- As a method of circumventing ABCG2-associated drug resistance, low-polarity camptothecin analogues are considered to be potent lead compounds. (PMID:15170677)
- BCRP mRNA levels, antibody staining and function correlated strongly in cell lines but not in acute myeloid leukemia samples, suggesting complex biology of BCRP in AML and incomplete modeling by cell lines (PMID:15208643)
- imatinib is a substrate for BCRP; it competes with mitoxantrone for drug export (PMID:15251980)
- GXXXG motif promotes proper packing of the transmembrane segments in the functional ABCG2 homodimer, although it does not solely arbitrate dimerization (PMID:15260487)
- Results suggest that 1) the predominant allelic expression pattern of BCRP in placental samples is biallelic, and 2) the mutation C421A is not a genetic variant acting in cis, but is considered to influence translation efficiency. (PMID:15475413)
- conformational changes of the ABCG2 multidrug transporter modify its interaction with a monoclonal antibody on the cell surface (PMID:15557326)
- Cyclosporin A is neither a substrate nor an inhibitor of the human ABCG2 transporter. (PMID:15598974)
- The breast cancer resistance protein (BCRP) can be expressed in AML and BCRP mRNA expression was determined in samples from 40 AML patients by real-time RT-PCR. (PMID:15607361)
- The ABCG2, a member of the ATP binding cassette (ABC) transporters, has been identified as a molecular determinant for bone marrow stem cells and proposed as a universal marker for stem cells. (PMID:15625123)
Cross-species orthologs
12 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | abcg2b | ENSDARG00000079361 |
| mus_musculus | Abcg3 | ENSMUSG00000029299 |
| rattus_norvegicus | Abcg3l4 | ENSRNOG00000064381 |
| rattus_norvegicus | Abcg3l4 | ENSRNOG00000065003 |
| rattus_norvegicus | Abcg3l1 | ENSRNOG00000069481 |
| rattus_norvegicus | Abcg3 | ENSRNOG00000070774 |
| drosophila_melanogaster | CG31689 | FBGN0031449 |
| drosophila_melanogaster | CG31121 | FBGN0051121 |
| drosophila_melanogaster | CG32091 | FBGN0052091 |
| caenorhabditis_elegans | WBGENE00006522 | |
| caenorhabditis_elegans | WBGENE00015479 | |
| caenorhabditis_elegans | WBGENE00017179 |
Paralogs (4): ABCG5 (ENSG00000138075), ABCG8 (ENSG00000143921), ABCG1 (ENSG00000160179), ABCG4 (ENSG00000172350)
Protein
Protein identifiers
Broad substrate specificity ATP-binding cassette transporter ABCG2 — Q9UNQ0 (reviewed: Q9UNQ0)
Alternative names: ATP-binding cassette sub-family G member 2, Breast cancer resistance protein, CDw338, Mitoxantrone resistance-associated protein, Placenta-specific ATP-binding cassette transporter, Urate exporter
All UniProt accessions (2): Q9UNQ0, F8S0F2
UniProt curated annotations — full annotation on UniProt →
Function. Broad substrate specificity ATP-dependent transporter of the ATP-binding cassette (ABC) family that actively extrudes a wide variety of physiological compounds, dietary toxins and xenobiotics from cells. Involved in porphyrin homeostasis, mediating the export of protoporphyrin IX (PPIX) from both mitochondria to cytosol and cytosol to extracellular space, it also functions in the cellular export of heme. Also mediates the efflux of sphingosine-1-P from cells. Acts as a urate exporter functioning in both renal and extrarenal urate excretion. In kidney, it also functions as a physiological exporter of the uremic toxin indoxyl sulfate. Also involved in the excretion of steroids like estrone 3-sulfate/E1S, 3beta-sulfooxy-androst-5-en-17-one/DHEAS, and other sulfate conjugates. Mediates the secretion of the vitamins riboflavin and biotin into milk. Involved in the excretion of the riboflavin-derived compound lumichrome into the intestinal lumen and in its secretion into milk. Extrudes pheophorbide a, a phototoxic porphyrin catabolite of chlorophyll, reducing its bioavailability. Plays an important role in the exclusion of xenobiotics from the brain. It confers to cells a resistance to multiple drugs and other xenobiotics including mitoxantrone, pheophorbide, camptothecin, methotrexate, azidothymidine, and the anthracyclines daunorubicin and doxorubicin, through the control of their efflux. In placenta, it limits the penetration of drugs from the maternal plasma into the fetus. May play a role in early stem cell self-renewal by blocking differentiation. In inflammatory macrophages, exports itaconate from the cytosol to the extracellular compartment and limits the activation of TFEB-dependent lysosome biogenesis involved in antibacterial innate immune response.
Subunit / interactions. Homodimer; disulfide-linked. The minimal functional unit is a homodimer, but the major oligomeric form in plasma membrane is a homotetramer with possibility of higher order oligomerization up to homododecamers.
Subcellular location. Cell membrane. Apical cell membrane. Mitochondrion membrane.
Tissue specificity. Highly expressed in placenta. Low expression in small intestine, liver and colon. Expressed in brain (at protein level).
Post-translational modifications. N-glycosylated. Glycosylation-deficient ABCG2 is normally expressed and functional. Phosphorylated. Phosphorylation at Thr-362 by PIM1 is induced by drugs like mitoxantrone and is associated with cells increased drug resistance. It regulates the localization to the plasma membrane, the homooligomerization and therefore, the activity of the transporter.
Activity regulation. Specifically inhibited by the fungal toxin fumitremorgin C and Ko143.
Domain organisation. The extracellular loop 3 (ECL3) is involved in binding porphyrins and transfer them to other carriers, probably albumin.
Polymorphism. Genetic variations in ABCG2 define the blood group Junior system (JR) [MIM:614490]. Individuals with Jr(a-) blood group lack the Jr(a) antigen on their red blood cells. These individuals may have anti-Jr(a) antibodies in their serum, which can cause transfusion reactions or hemolytic disease of the fetus or newborn. Although the clinical significance of the Jr(a-) blood group has been controversial, severe fatal hemolytic disease of the newborn has been reported. The Jr(a-) phenotype has a higher frequency in individuals of Asian descent, compared to those of European descent. The Jr(a-) phenotype is inherited as an autosomal recessive trait. Genetic variations in ABCG2 influence the variance in serum uric acid concentrations and define the serum uric acid concentration quantitative trait locus 1 (UAQTL1) [MIM:138900]. Excess serum accumulation of uric acid can lead to the development of gout, a common disorder characterized by tissue deposition of monosodium urate crystals as a consequence of hyperuricemia.
Similarity. Belongs to the ABC transporter superfamily. ABCG family. Eye pigment precursor importer (TC 3.A.1.204) subfamily.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q9UNQ0-1 | 1 | yes |
| Q9UNQ0-2 | 2 |
RefSeq proteins (7): NP_001244315, NP_001335914, NP_001335915, NP_001335916, NP_001335917, NP_001335918, NP_004818* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR003439 | ABC_transporter-like_ATP-bd | Domain |
| IPR003593 | AAA+_ATPase | Domain |
| IPR013525 | ABC2_TM | Domain |
| IPR027417 | P-loop_NTPase | Homologous_superfamily |
| IPR043926 | ABCG_dom | Domain |
| IPR050352 | ABCG_transporters | Family |
Pfam: PF00005, PF01061, PF19055
Enzyme classification (BRENDA):
- EC 7.6.2.2 — ABC-type xenobiotic transporter (BRENDA: 49 organisms, 716 substrates, 471 inhibitors, 280 Km, 31 kcat entries)
- EC 7.6.2.3 — ABC-type glutathione-S-conjugate transporter (BRENDA: 8 organisms, 145 substrates, 63 inhibitors, 16 Km, 0 kcat entries)
Substrate kinetics (BRENDA)
75 substrates with measured Km, best-characterized 15. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| ATP | 0.0009–9 | 105 |
| VERAPAMIL/IN | 0.0006–0.0058 | 11 |
| VINBLASTINE/IN | 0.0002–0.1455 | 11 |
| ESTRADIOL 17-BETA-D-GLUCURONIDE/IN | 0.013–0.17 | 7 |
| LEUKOTRIENE C4/IN | — | 7 |
| METHOTREXATE/IN | 0.24–0.776 | 6 |
| NICARDIPINE/IN | 0.0004–0.0026 | 6 |
| PROGESTERONE/IN | 0.0038–0.0207 | 6 |
| CYCLIC GUANOSINE MONOPHOSPHATE/IN | 0.36–2 | 5 |
| VERAPAMIL | 0.0022–0.0115 | 5 |
| ATP | 0.0865–0.91 | 5 |
| COLCHICINE/IN | 0.037–0.72 | 4 |
| FOLIC ACID/IN | 0.13–0.26 | 4 |
| PACLITAXEL/IN | 0.0007–0.0009 | 4 |
| RHODAMINE 123/IN | 0.0118–0.0354 | 4 |
Catalyzed reactions (Rhea), 12 shown:
- urate(in) + ATP + H2O = urate(out) + ADP + phosphate + H(+) (RHEA:16461)
- sphing-4-enine 1-phosphate(in) + ATP + H2O = sphing-4-enine 1-phosphate(out) + ADP + phosphate + H(+) (RHEA:38951)
- 17beta-estradiol 17-O-(beta-D-glucuronate)(in) + ATP + H2O = 17beta-estradiol 17-O-(beta-D-glucuronate)(out) + ADP + phosphate + H(+) (RHEA:60128)
- indoxyl sulfate(in) + ATP + H2O = indoxyl sulfate(out) + ADP + phosphate + H(+) (RHEA:61332)
- estrone 3-sulfate(in) + ATP + H2O = estrone 3-sulfate(out) + ADP + phosphate + H(+) (RHEA:61348)
- riboflavin(in) + ATP + H2O = riboflavin(out) + ADP + phosphate + H(+) (RHEA:61352)
- methotrexate(in) + ATP + H2O = methotrexate(out) + ADP + phosphate + H(+) (RHEA:61356)
- pheophorbide a(in) + ATP + H2O = pheophorbide a(out) + ADP + phosphate + H(+) (RHEA:61360)
- dehydroepiandrosterone 3-sulfate(in) + ATP + H2O = dehydroepiandrosterone 3-sulfate(out) + ADP + phosphate + H(+) (RHEA:61364)
- 4-methylumbelliferone sulfate(in) + ATP + H2O = 4-methylumbelliferone sulfate(out) + ADP + phosphate + H(+) (RHEA:61368)
- 4-methylumbelliferone beta-D-glucuronate(in) + ATP + H2O = 4-methylumbelliferone beta-D-glucuronate(out) + ADP + phosphate + H(+) (RHEA:61372)
- 5,7-dimethyl-2-methylamino-4-(3-pyridylmethyl)-1,3-benzothiazol-6-yl sulfate(in) + ATP + H2O = 5,7-dimethyl-2-methylamino-4-(3-pyridylmethyl)-1,3-benzothiazol-6-yl sulfate(out) + ADP + phosphate + H(+) (RHEA:61376)
UniProt features (139 total): helix 31, sequence variant 26, mutagenesis site 25, strand 17, topological domain 7, sequence conflict 7, transmembrane region 6, turn 5, binding site 4, domain 2, site 2, disulfide bond 2, splice variant 2, chain 1, modified residue 1, glycosylation site 1
Structure
Experimental structures (PDB)
29 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 8QCM | ELECTRON MICROSCOPY | 2.39 |
| 8U2C | ELECTRON MICROSCOPY | 2.5 |
| 8Q7B | ELECTRON MICROSCOPY | 2.56 |
| 8PXO | ELECTRON MICROSCOPY | 3 |
| 8PY4 | ELECTRON MICROSCOPY | 3 |
| 8P7W | ELECTRON MICROSCOPY | 3.04 |
| 6HBU | ELECTRON MICROSCOPY | 3.09 |
| 6HZM | ELECTRON MICROSCOPY | 3.09 |
| 6ETI | ELECTRON MICROSCOPY | 3.1 |
| 7OJH | ELECTRON MICROSCOPY | 3.1 |
| 8BHT | ELECTRON MICROSCOPY | 3.1 |
| 7NEQ | ELECTRON MICROSCOPY | 3.12 |
| 8BI0 | ELECTRON MICROSCOPY | 3.2 |
| 8P8A | ELECTRON MICROSCOPY | 3.2 |
| 7NEZ | ELECTRON MICROSCOPY | 3.39 |
| 7OJ8 | ELECTRON MICROSCOPY | 3.4 |
| 7OJI | ELECTRON MICROSCOPY | 3.4 |
| 8P8J | ELECTRON MICROSCOPY | 3.49 |
| 6VXF | ELECTRON MICROSCOPY | 3.5 |
| 7NFD | ELECTRON MICROSCOPY | 3.51 |
| 6FFC | ELECTRON MICROSCOPY | 3.56 |
| 6HIJ | ELECTRON MICROSCOPY | 3.56 |
| 6HCO | ELECTRON MICROSCOPY | 3.58 |
| 6FEQ | ELECTRON MICROSCOPY | 3.6 |
| 6VXI | ELECTRON MICROSCOPY | 3.7 |
| 5NJ3 | ELECTRON MICROSCOPY | 3.78 |
| 5NJG | ELECTRON MICROSCOPY | 3.78 |
| 6VXH | ELECTRON MICROSCOPY | 4 |
| 6VXJ | ELECTRON MICROSCOPY | 4.1 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q9UNQ0-F1 | 85.54 | 0.66 |
Antibody-complex structures (SAbDab): 16 — 5NJ3, 5NJG, 6ETI, 6FEQ, 6HCO, 7NEQ, 7NEZ, 7NFD, 8P7W, 8P8A, 8P8J, 8PXO, 8PY4, 8Q7B, 8QCM, 8U2C
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (2): 418 (not glycosylated); 557 (not glycosylated)
Ligand- & substrate-binding residues (4): 80–87; 184–190; 211; 243
Post-translational modifications (1): 362
Disulfide bonds (2): 592–608, 603
Glycosylation sites (1): 596
Mutagenesis-validated functional residues (25):
| Position | Phenotype |
|---|---|
| 71 | decreased protein abundance. no effect on substrate transmembrane transport. |
| 86 | decreased protein abundance. decreased localization to the plasma membrane and retained intracellularly. loss of atpase- |
| 211 | decreased estrone-3 sulfate atpase-coupled transmembrane transporter activity. decreased substrate-induced atp hydrolysi |
| 362 | loss of phosphorylation by pim1. decreased localization to the plasma membrane. decreased homooligomerization. loss of f |
| 362 | loss of phosphorylation by pim1. constitutive drug resistance independent of pim1. |
| 383 | loss of protein expression. |
| 418 | no effect. |
| 435 | no effect on stability. increased estrone-3 sulfate atpase-coupled transmembrane transporter activity. increased substra |
| 435 | no effect on stability. decreased estrone-3 sulfate atpase-coupled transmembrane transporter activity. decreased substra |
| 436 | no effect on stability. decreased estrone-3 sulfate atpase-coupled transmembrane transporter activity. decreased substra |
| 439 | no effect on stability. decreased estrone-3 sulfate atpase-coupled transmembrane transporter activity. decreased substra |
| 482 | decreases atpase activity. |
| 482 | increases atpase activity. |
| 482 | no change in atpase activity. |
| 482 | decreases transport activity. |
| 546 | no effect on stability. no effect on estrone-3 sulfate atpase-coupled transmembrane transporter activity. no effect on s |
| 546 | no effect on stability. decreased estrone-3 sulfate atpase-coupled transmembrane transporter activity. increased basal a |
| 549 | no effect on stability. no effect on estrone-3 sulfate atpase-coupled transmembrane transporter activity. no effect on s |
| 554 | no effect on stability. increased estrone-3 sulfate atpase-coupled transmembrane transporter activity. increased basal a |
| 555 | loss of protein expression. |
| 557 | no effect. |
| 583 | strongly reduced binding to hemin but not to ppix. |
| 596 | loss of glycosylation. |
| 603 | strongly reduced binding to hemin but not to ppix. |
| 605 | no effect on hemin binding. |
Function
Pathways and Gene Ontology
Reactome pathways
23 pathways
| ID | Pathway |
|---|---|
| R-HSA-1660661 | Sphingolipid de novo biosynthesis |
| R-HSA-189451 | Heme biosynthesis |
| R-HSA-189483 | Heme degradation |
| R-HSA-2161517 | Abacavir transmembrane transport |
| R-HSA-917937 | Iron uptake and transport |
| R-HSA-9725554 | Differentiation of Keratinocytes in Interfollicular Epidermis in Mammalian Skin |
| R-HSA-9753281 | Paracetamol ADME |
| R-HSA-9793528 | Ciprofloxacin ADME |
| R-HSA-9818032 | NFE2L2 regulating MDR associated enzymes |
| R-HSA-1266738 | Developmental Biology |
| R-HSA-1430728 | Metabolism |
| R-HSA-189445 | Metabolism of porphyrins |
| R-HSA-2161522 | Abacavir ADME |
| R-HSA-2262752 | Cellular responses to stress |
| R-HSA-382551 | Transport of small molecules |
| R-HSA-428157 | Sphingolipid metabolism |
| R-HSA-556833 | Metabolism of lipids |
| R-HSA-8953897 | Cellular responses to stimuli |
| R-HSA-9711123 | Cellular response to chemical stress |
| R-HSA-9734767 | Developmental Cell Lineages |
| R-HSA-9748784 | Drug ADME |
| R-HSA-9755511 | KEAP1-NFE2L2 pathway |
| R-HSA-9759194 | Nuclear events mediated by NFE2L2 |
MSigDB gene sets: 315 (showing top):
GSE18804_SPLEEN_MACROPHAGE_VS_TUMORAL_MACROPHAGE_UP, GOBP_EXCRETION, GOBP_CIRCULATORY_SYSTEM_PROCESS, PAL_PRMT5_TARGETS_UP, REACTOME_METABOLISM_OF_PORPHYRINS, VICENT_METASTASIS_UP, GOCC_CELL_SURFACE, GOBP_ORGANIC_ACID_TRANSPORT, KEGG_ABC_TRANSPORTERS, BOYAULT_LIVER_CANCER_SUBCLASS_G12_DN, OSWALD_HEMATOPOIETIC_STEM_CELL_IN_COLLAGEN_GEL_UP, GOBP_CELLULAR_RESPONSE_TO_TOXIC_SUBSTANCE, GOBP_SPHINGOLIPID_METABOLIC_PROCESS, BILD_E2F3_ONCOGENIC_SIGNATURE, ENGELMANN_CANCER_PROGENITORS_UP
GO Biological Process (14): obsolete organic anion transport (GO:0015711), biotin transport (GO:0015878), sphingolipid biosynthetic process (GO:0030148), riboflavin transport (GO:0032218), urate metabolic process (GO:0046415), transmembrane transport (GO:0055085), transepithelial transport (GO:0070633), renal urate salt excretion (GO:0097744), export across plasma membrane (GO:0140115), transport across blood-brain barrier (GO:0150104), cellular detoxification (GO:1990748), xenobiotic transport across blood-brain barrier (GO:1990962), lipid transport (GO:0006869), urate transport (GO:0015747)
GO Molecular Function (17): ATP binding (GO:0005524), obsolete organic anion transmembrane transporter activity (GO:0008514), ABC-type xenobiotic transporter activity (GO:0008559), urate transmembrane transporter activity (GO:0015143), biotin transmembrane transporter activity (GO:0015225), efflux transmembrane transporter activity (GO:0015562), ATP hydrolysis activity (GO:0016887), riboflavin transmembrane transporter activity (GO:0032217), ATPase-coupled transmembrane transporter activity (GO:0042626), identical protein binding (GO:0042802), protein homodimerization activity (GO:0042803), xenobiotic transmembrane transporter activity (GO:0042910), sphingolipid intramembrane carrier activity (GO:0046624), nucleotide binding (GO:0000166), protein binding (GO:0005515), protein dimerization activity (GO:0046983), ABC-type transporter activity (GO:0140359)
GO Cellular Component (9): nucleoplasm (GO:0005654), plasma membrane (GO:0005886), apical plasma membrane (GO:0016324), brush border membrane (GO:0031526), mitochondrial membrane (GO:0031966), membrane raft (GO:0045121), external side of apical plasma membrane (GO:0098591), mitochondrion (GO:0005739), membrane (GO:0016020)
Reactome top-level categories
Rollup of top-12 pathways:
| Category | Pathways |
|---|---|
| Drug ADME | 3 |
| Metabolism of porphyrins | 2 |
| Metabolism | 2 |
| Sphingolipid metabolism | 1 |
| Abacavir ADME | 1 |
| Transport of small molecules | 1 |
| Developmental Cell Lineages of the Integumentary System | 1 |
| Nuclear events mediated by NFE2L2 | 1 |
| Cellular responses to stimuli | 1 |
| Metabolism of lipids | 1 |
| Cellular responses to stress | 1 |
| Developmental Biology | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| nitrogen compound transport | 3 |
| transport | 3 |
| vitamin transport | 2 |
| cellular process | 2 |
| xenobiotic transport | 2 |
| vitamin transmembrane transporter activity | 2 |
| transmembrane transporter activity | 2 |
| ATP-dependent activity | 2 |
| protein binding | 2 |
| cellular anatomical structure | 2 |
| apical plasma membrane | 2 |
| monocarboxylic acid transport | 1 |
| sulfur compound transport | 1 |
| sphingolipid metabolic process | 1 |
| lipid biosynthetic process | 1 |
| small molecule metabolic process | 1 |
| purine-containing compound metabolic process | 1 |
| renal tubular secretion | 1 |
| transmembrane transport | 1 |
| export from cell | 1 |
| vascular transport | 1 |
| cellular response to toxic substance | 1 |
| detoxification | 1 |
| transport across blood-brain barrier | 1 |
| lipid localization | 1 |
| adenyl ribonucleotide binding | 1 |
| purine ribonucleoside triphosphate binding | 1 |
| xenobiotic transmembrane transporter activity | 1 |
| ABC-type transporter activity | 1 |
| urate transport | 1 |
| salt transmembrane transporter activity | 1 |
| monocarboxylic acid transmembrane transporter activity | 1 |
| biotin transport | 1 |
| sulfur compound transmembrane transporter activity | 1 |
| ribonucleoside triphosphate phosphatase activity | 1 |
| riboflavin transport | 1 |
| primary active transmembrane transporter activity | 1 |
| ATP hydrolysis activity | 1 |
| identical protein binding | 1 |
| protein dimerization activity | 1 |
Protein interactions and networks
STRING
3633 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| ABCG2 | ABCC1 | P33527 | 969 |
| ABCG2 | ABCC2 | Q92887 | 889 |
| ABCG2 | SLCO1B1 | Q9Y6L6 | 886 |
| ABCG2 | SLC2A9 | Q9NRM0 | 874 |
| ABCG2 | SLC22A12 | Q96S37 | 861 |
| ABCG2 | BSG | P35613 | 839 |
| ABCG2 | MRPS7 | Q9Y2R9 | 813 |
| ABCG2 | ALB | P02768 | 806 |
| ABCG2 | SLC17A1 | Q14916 | 803 |
| ABCG2 | SLC22A1 | O15245 | 798 |
| ABCG2 | SLC22A8 | Q8TCC7 | 796 |
| ABCG2 | SLCO1B3 | Q9NPD5 | 790 |
| ABCG2 | PROM1 | O43490 | 783 |
| ABCG2 | CYP3A4 | P05184 | 778 |
| ABCG2 | SLCO2B1 | O94956 | 767 |
IntAct
29 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| ABCG2 | ABCG2 | psi-mi:“MI:0915”(physical association) | 0.790 |
| ABCG2 | ABCG2 | psi-mi:“MI:0407”(direct interaction) | 0.790 |
| ABCG2 | PIM1 | psi-mi:“MI:0915”(physical association) | 0.640 |
| PIM1 | ABCG2 | psi-mi:“MI:0915”(physical association) | 0.640 |
| PIM1 | ABCG2 | psi-mi:“MI:0403”(colocalization) | 0.640 |
| ABCG2 | ENPP1 | psi-mi:“MI:0407”(direct interaction) | 0.600 |
| ENPP1 | ABCG2 | psi-mi:“MI:0915”(physical association) | 0.600 |
| ABCG2 | ENPP1 | psi-mi:“MI:0915”(physical association) | 0.600 |
| Trim69 | psi-mi:“MI:0915”(physical association) | 0.400 | |
| GPC1 | SNAP23 | psi-mi:“MI:0915”(physical association) | 0.400 |
| GPC1 | GANAB | psi-mi:“MI:0915”(physical association) | 0.400 |
| ABCG2 | UBC | psi-mi:“MI:0915”(physical association) | 0.400 |
| UBC | ABCG2 | psi-mi:“MI:0915”(physical association) | 0.400 |
| Npc1 | ESYT2 | psi-mi:“MI:0914”(association) | 0.350 |
| ARRDC5 | PLPP1 | psi-mi:“MI:0914”(association) | 0.350 |
| ABCG2 | SCAMP1 | psi-mi:“MI:0914”(association) | 0.350 |
| RHCG | TMEM223 | psi-mi:“MI:0914”(association) | 0.350 |
| SLC34A2 | SNAP23 | psi-mi:“MI:0914”(association) | 0.350 |
| SLC6A7 | ABCB1 | psi-mi:“MI:0914”(association) | 0.350 |
| SLC7A2 | SCAMP3 | psi-mi:“MI:0914”(association) | 0.350 |
| SLC7A4 | ESYT2 | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (81): ABCG2 (Affinity Capture-MS), ABCG2 (Affinity Capture-MS), ABCG2 (Affinity Capture-MS), ABCG2 (Affinity Capture-MS), ABCG2 (Affinity Capture-MS), ABCG2 (Affinity Capture-MS), ABCG2 (Affinity Capture-MS), ABCG2 (Affinity Capture-MS), ABCG2 (Affinity Capture-MS), ABCG2 (Affinity Capture-MS), ABCG2 (Affinity Capture-MS), ABCG2 (Affinity Capture-MS), ABCG2 (Affinity Capture-MS), ABCG2 (Affinity Capture-MS), ABCG2 (Affinity Capture-MS)
ESM2 similar proteins: A2AKQ0, A2VE55, A5GFZ5, C9WPN6, F1QGW6, F6RQL9, O60762, O70152, O77676, P00516, P0C605, P20461, P32189, P35250, P37273, P41091, P53033, P81795, Q05B83, Q0IID9, Q13126, Q13976, Q14409, Q15B89, Q1JQ93, Q2KHU8, Q2KJ61, Q2TBV5, Q2VIR3, Q3MHF7, Q5HZM6, Q5MB13, Q5R797, Q5RDC9, Q5RIC0, Q5ZHS1, Q5ZMS3, Q63060, Q641W4, Q64516
Diamond homologs: A0A059J0G5, A0A0M3R8G1, A0A0M4FLW6, A0A1U8QKX8, A2WSH0, A9YWR6, B8ALI0, B9G300, B9G5Y5, C7J6G6, D3GE74, D3ZCM3, F2PLH2, F2RSQ6, F2SHL1, H9BZ66, O24367, O80946, O81016, P10090, P25371, P45843, P45844, P58428, Q05360, Q08234, Q0JLC5, Q16928, Q17320, Q27256, Q2QV81, Q4GZT4, Q4WFQ4, Q54CG0, Q55DA0, Q55DR1, Q55DW4, Q55GB1, Q5MB13, Q64343
SIGNOR signaling
4 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| PPARG | “up-regulates quantity by expression” | ABCG2 | “transcriptional regulation” |
| SALL4 | “up-regulates quantity by expression” | ABCG2 | “transcriptional regulation” |
| SMARCA4 | “up-regulates quantity by expression” | ABCG2 | “transcriptional regulation” |
| PIM1 | “up-regulates activity” | ABCG2 | phosphorylation |
Disease & clinical
Cancer significance
Clinical variants and AI predictions
ClinVar
97 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 14 |
| Likely pathogenic | 1 |
| Uncertain significance | 46 |
| Likely benign | 5 |
| Benign | 8 |
Top pathogenic / likely-pathogenic (15)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1341211 | GRCh37/hg19 4q21.21-22.1(chr4:80467886-93362064)x1 | Pathogenic |
| 145649 | GRCh38/hg38 4q21.21-22.3(chr4:80879777-94809447)x1 | Pathogenic |
| 148194 | GRCh38/hg38 4q21.21-24(chr4:80427023-100855441)x1 | Pathogenic |
| 1527097 | GRCh37/hg19 4q13.3-22.1(chr4:75737340-91131156) | Pathogenic |
| 1527100 | GRCh37/hg19 4q21.21-22.2(chr4:79780152-94873225) | Pathogenic |
| 1527103 | GRCh37/hg19 4q21.21-22.1(chr4:81054789-90667421) | Pathogenic |
| 1527108 | GRCh37/hg19 4q21.23-22.1(chr4:85839771-93071150) | Pathogenic |
| 152923 | GRCh38/hg38 4q21.23-22.2(chr4:85449365-93973194)x1 | Pathogenic |
| 2498966 | GRCh37/hg19 4q22.1(chr4:88344058-89061168)x1 | Pathogenic |
| 2579270 | GRCh38/hg38 4q21.21-23(chr4:79123548-99457773)x1 | Pathogenic |
| 3062764 | GRCh37/hg19 4q21.21-22.3(chr4:81558759-95965995)x1 | Pathogenic |
| 394976 | GRCh37/hg19 4q21.21-22.1(chr4:82283358-90341831)x1 | Pathogenic |
| 562937 | GRCh37/hg19 4q21.21-22.3(chr4:81314915-96636651)x1 | Pathogenic |
| 59455 | GRCh38/hg38 4q21.21-22.1(chr4:79575748-92412449)x1 | Pathogenic |
| 3062760 | GRCh37/hg19 4q21.23-22.3(chr4:85139670-96295033)x3 | Likely pathogenic |
SpliceAI
2331 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 4:88094575:A:AC | donor_gain | 1.0000 |
| 4:88094576:C:CC | donor_gain | 1.0000 |
| 4:88094576:CG:C | donor_gain | 1.0000 |
| 4:88094576:CGTTG:C | donor_gain | 1.0000 |
| 4:88094658:GCCTA:G | acceptor_loss | 1.0000 |
| 4:88094659:CCTA:C | acceptor_loss | 1.0000 |
| 4:88094660:C:CC | acceptor_gain | 1.0000 |
| 4:88094660:CT:C | acceptor_loss | 1.0000 |
| 4:88094661:T:G | acceptor_loss | 1.0000 |
| 4:88095605:AAAAT:A | acceptor_gain | 1.0000 |
| 4:88095606:AAAT:A | acceptor_gain | 1.0000 |
| 4:88095607:AAT:A | acceptor_gain | 1.0000 |
| 4:88095608:AT:A | acceptor_gain | 1.0000 |
| 4:88095610:C:CA | acceptor_loss | 1.0000 |
| 4:88097615:A:T | acceptor_gain | 1.0000 |
| 4:88107283:A:AC | acceptor_gain | 1.0000 |
| 4:88107283:A:C | acceptor_gain | 1.0000 |
| 4:88113353:TGGAA:T | donor_gain | 1.0000 |
| 4:88113363:T:C | donor_gain | 1.0000 |
| 4:88113556:T:TC | acceptor_gain | 1.0000 |
| 4:88113563:C:CT | acceptor_gain | 1.0000 |
| 4:88113564:A:T | acceptor_gain | 1.0000 |
| 4:88113565:G:GC | acceptor_gain | 1.0000 |
| 4:88113569:A:AC | acceptor_gain | 1.0000 |
| 4:88113569:A:C | acceptor_gain | 1.0000 |
| 4:88114952:TATAC:T | donor_loss | 1.0000 |
| 4:88114954:TA:T | donor_loss | 1.0000 |
| 4:88114955:A:T | donor_loss | 1.0000 |
| 4:88114956:C:CG | donor_loss | 1.0000 |
| 4:88131795:ATACT:A | donor_loss | 1.0000 |
AlphaMissense
4276 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 4:88118223:G:C | H243D | 1.000 |
| 4:88118216:G:T | P245H | 0.999 |
| 4:88121663:C:G | A221P | 0.999 |
| 4:88121673:G:C | D217E | 0.999 |
| 4:88121673:G:T | D217E | 0.999 |
| 4:88121674:T:A | D217V | 0.999 |
| 4:88121674:T:C | D217G | 0.999 |
| 4:88121675:C:G | D217H | 0.999 |
| 4:88121689:G:T | P212H | 0.999 |
| 4:88121692:T:A | E211V | 0.999 |
| 4:88132582:T:A | K86I | 0.999 |
| 4:88095541:G:C | S572R | 0.998 |
| 4:88095541:G:T | S572R | 0.998 |
| 4:88095543:T:G | S572R | 0.998 |
| 4:88121674:T:G | D217A | 0.998 |
| 4:88121675:C:T | D217N | 0.998 |
| 4:88121677:A:G | L216S | 0.998 |
| 4:88121689:G:C | P212R | 0.998 |
| 4:88121691:C:A | E211D | 0.998 |
| 4:88121691:C:G | E211D | 0.998 |
| 4:88121692:T:C | E211G | 0.998 |
| 4:88121692:T:G | E211A | 0.998 |
| 4:88121693:C:T | E211K | 0.998 |
| 4:88121695:T:A | D210V | 0.998 |
| 4:88121748:T:A | K192N | 0.998 |
| 4:88121748:T:G | K192N | 0.998 |
| 4:88131083:A:G | L170P | 0.998 |
| 4:88131803:T:A | Q126H | 0.998 |
| 4:88131803:T:G | Q126H | 0.998 |
| 4:88132583:T:G | K86Q | 0.998 |
dbSNP variants (sampled 300 via entrez): RS1000002258 (4:88094347 G>A), RS1000039382 (4:88207764 C>T), RS1000089015 (4:88222936 G>A,C), RS1000106772 (4:88161991 T>A), RS1000117689 (4:88092723 C>T), RS1000121656 (4:88223327 C>T), RS1000176118 (4:88204945 T>A), RS10001782 (4:88136188 T>C,G), RS1000204267 (4:88156050 C>G), RS1000205232 (4:88126323 T>A,C), RS1000239974 (4:88168209 C>A), RS1000255944 (4:88112437 T>A), RS1000261345 (4:88173566 C>A,T), RS1000266205 (4:88216810 A>G), RS1000275640 (4:88112151 T>G)
Disease associations
OMIM: gene MIM:603756 | disease phenotypes: MIM:613509
GenCC curated gene-disease
Mondo (3): chromosome 4q21 deletion syndrome (MONDO:0013292), autosomal dominant polycystic kidney disease (MONDO:0004691), hereditary breast ovarian cancer syndrome (MONDO:0003582)
Orphanet (3): 4q21 microdeletion syndrome (Orphanet:238750), Autosomal dominant polycystic kidney disease (Orphanet:730), Hereditary breast and/or ovarian cancer syndrome (Orphanet:145)
HPO phenotypes
5 total (5 of 5 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000006 | Autosomal dominant inheritance |
| HP:0000951 | Abnormality of the skin |
| HP:0001369 | Arthritis |
| HP:0002149 | Hyperuricemia |
| HP:0033073 | Urate tophus |
GWAS associations
96 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST000242_3 | Urate levels | 3.000000e-60 |
| GCST000418_5 | Uric acid levels | 1.000000e-10 |
| GCST000418_9 | Uric acid levels | 2.000000e-18 |
| GCST000581_5 | Urate levels | 1.000000e-13 |
| GCST000818_3 | Urate levels | 3.000000e-23 |
| GCST000818_5 | Urate levels | 1.000000e-75 |
| GCST001247_2 | Cardiovascular disease risk factors | 2.000000e-17 |
| GCST001268_3 | Gout | 3.000000e-12 |
| GCST001269_4 | Serum uric acid levels | 2.000000e-20 |
| GCST001374_6 | Uric acid levels | 5.000000e-06 |
| GCST001408_3 | Response to statins (LDL cholesterol change) | 2.000000e-15 |
| GCST001608_3 | Renal function-related traits (urate) | 4.000000e-30 |
| GCST001713_23 | Dental caries | 7.000000e-08 |
| GCST001726_3 | Lipoprotein-associated phospholipase A2 activity change in response to statin therapy | 2.000000e-10 |
| GCST001790_4 | Gout | 2.000000e-32 |
| GCST001791_5 | Urate levels | 1.000000e-134 |
| GCST002355_1 | Serum uric acid levels | 3.000000e-42 |
| GCST002355_2 | Serum uric acid levels | 3.000000e-18 |
| GCST002355_3 | Serum uric acid levels | 4.000000e-20 |
| GCST002650_2 | Coffee consumption (cups per day) | 9.000000e-08 |
| GCST002773_1 | Gout | 7.000000e-54 |
| GCST002828_1 | Urate levels in obese individuals | 9.000000e-08 |
| GCST002828_32 | Urate levels in obese individuals | 1.000000e-07 |
| GCST002829_31 | Urate levels in overweight individuals | 2.000000e-30 |
| GCST002829_39 | Urate levels in overweight individuals | 2.000000e-11 |
| GCST002829_41 | Urate levels in overweight individuals | 1.000000e-22 |
| GCST002830_10 | Urate levels in lean individuals | 1.000000e-22 |
| GCST002830_25 | Urate levels in lean individuals | 2.000000e-29 |
| GCST002830_7 | Urate levels in lean individuals | 6.000000e-13 |
| GCST002989_5 | LDL peak particle diameter (total fat intake interaction) | 9.000000e-06 |
EFO canonical traits (13, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004531 | urate measurement |
| EFO:0004761 | uric acid measurement |
| EFO:0007804 | LDL cholesterol change measurement |
| EFO:0004746 | lipoprotein-associated phospholipase A(2) measurement |
| EFO:0004330 | coffee consumption |
| EFO:0006782 | cups of coffee per day measurement |
| EFO:0007677 | LDL peak particle diameter measurement |
| EFO:0007678 | total fat intake measurement |
| EFO:0009104 | hyperuricemia |
| EFO:0010089 | bitter beverage consumption measurement |
| EFO:0006781 | coffee consumption measurement |
| EFO:0010091 | tea consumption measurement |
| EFO:0004346 | neuroimaging measurement |
MeSH disease descriptors (2)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D061325 | Hereditary Breast and Ovarian Cancer Syndrome | C04.588.180.483; C04.588.322.455.431; C04.700.517; C12.050.351.500.056.630.705.431; C12.050.351.937.418.685.431; C12.100.250.056.630.705.431; C12.900.418.685.431; C16.320.700.517; C17.800.090.500.483; C19.344.410.431; C19.391.630.705.431 |
| D016891 | Polycystic Kidney, Autosomal Dominant | C12.050.351.968.419.403.875.500; C12.200.777.419.403.875.500; C12.950.419.403.875.500; C16.131.077.717.500; C16.320.184.625.500 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL5393 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
92 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 561,299 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL1014 | CANDESARTAN CILEXETIL | 4 | 11,194 |
| CHEMBL1017 | TELMISARTAN | 4 | 27,457 |
| CHEMBL114 | SAQUINAVIR | 4 | 39,899 |
| CHEMBL1163 | ATAZANAVIR | 4 | 22,094 |
| CHEMBL1164729 | FEBUXOSTAT | 4 | 3,499 |
| CHEMBL1171837 | PONATINIB | 4 | 8,955 |
| CHEMBL1219 | RABEPRAZOLE | 4 | 12,441 |
| CHEMBL1229211 | DOLUTEGRAVIR | 4 | 3,337 |
| CHEMBL1289494 | TIVOZANIB | 4 | 4,455 |
| CHEMBL1292 | CLOFAZIMINE | 4 | 15,481 |
| CHEMBL1336 | SORAFENIB | 4 | 86,060 |
| CHEMBL1397 | POSACONAZOLE | 4 | 541 |
| CHEMBL1405 | ESTRONE | 4 | 36,722 |
| CHEMBL1428 | NIMODIPINE | 4 | 32,587 |
| CHEMBL1450 | ATOVAQUONE | 4 | 14,589 |
| CHEMBL1484 | NICARDIPINE | 4 | 30,866 |
| CHEMBL1487 | ATORVASTATIN | 4 | 68,788 |
| CHEMBL1502 | PANTOPRAZOLE | 4 | 14,689 |
| CHEMBL1503 | OMEPRAZOLE | 4 | 52,284 |
| CHEMBL157101 | KETOCONAZOLE | 4 | 75,361 |
| CHEMBL160 | CYCLOSPORINE | 4 | |
| CHEMBL163 | RITONAVIR | 4 | |
| CHEMBL1630575 | CASPOFUNGIN | 4 | |
| CHEMBL1738797 | ALECTINIB | 4 | |
| CHEMBL175691 | RILPIVIRINE | 4 | |
| CHEMBL191 | LOSARTAN | 4 | |
| CHEMBL193 | NIFEDIPINE | 4 | |
| CHEMBL1946170 | REGORAFENIB | 4 | |
| CHEMBL2095208 | COBICISTAT | 4 | |
| CHEMBL2103830 | FOSTAMATINIB | 4 |
PharmGKB: 1 entry (VIP=true, CPIC=true)
PharmGKB clinical annotations
53 annotations.
| Variant | Type | Level | Drugs | Phenotypes |
|---|---|---|---|---|
| rs10011796 | Efficacy | 4 | allopurinol | |
| rs1061018 | Other | 3 | dasatinib;imatinib;nilotinib | |
| rs12505410 | Efficacy | 3 | imatinib | Chronic myelogenous leukemia;BCR-ABL1 positive |
| rs12505410 | Metabolism/PK | 3 | methotrexate | Osteosarcoma |
| rs13120400 | Efficacy | 3 | methotrexate | Psoriasis |
| rs13120400 | Efficacy | 3 | imatinib | Chronic myelogenous leukemia;BCR-ABL1 positive |
| rs13120400 | Efficacy,Metabolism/PK | 3 | deferasirox | Beta-thalassemia and related diseases |
| rs13120400 | Metabolism/PK | 3 | ceftriaxone | Central Nervous System Infectious Disorder |
| rs13120400 | Metabolism/PK | 3 | methotrexate | Osteosarcoma |
| rs13137622 | Metabolism/PK | 3 | methotrexate | Osteosarcoma |
| rs17731538 | Efficacy | 3 | methotrexate | Psoriasis |
| rs2199936 | Efficacy | 3 | rosuvastatin | |
| rs2231135 | Toxicity | 3 | methotrexate | Osteosarcoma |
| rs2231137 | Toxicity | 3 | irinotecan | Non-Small Cell Lung Carcinoma |
| rs2231137 | Other | 3 | dasatinib;imatinib;nilotinib | |
| rs2231137 | Dosage | 3 | imatinib | Drug Toxicity;Gastrointestinal Stromal Tumors |
| rs2231142 | Metabolism/PK | 1A | rosuvastatin | |
| rs2231142 | Metabolism/PK | 3 | tenofovir | HIV infectious disease |
| rs2231142 | Metabolism/PK | 3 | dolutegravir | HIV infectious disease |
| rs2231142 | Toxicity | 3 | methotrexate | Rheumatoid arthritis |
| rs2231142 | Metabolism/PK | 3 | apixaban | Atrial Fibrillation |
| rs2231142 | Efficacy,Toxicity | 3 | gemcitabine | Non-Small Cell Lung Carcinoma |
| rs2231142 | Efficacy | 3 | Opioid anesthetics;Other general anesthetics;volatile anesthetics | |
| rs2231142 | Toxicity | 3 | cyclophosphamide;doxorubicin;fluorouracil | Breast Neoplasms |
| rs2231142 | Toxicity | 3 | sunitinib | Neoplasms |
| rs2231142 | Metabolism/PK | 3 | lamotrigine | Epilepsy |
| rs2231142 | Other | 3 | atorvastatin | |
| rs2231142 | Toxicity | 1A | rosuvastatin | statin-related myopathy |
| rs2231142 | Metabolism/PK | 3 | simvastatin | |
| rs2231142 | Metabolism/PK | 3 | fluvastatin | |
| rs2231142 | Toxicity | 3 | atorvastatin | |
| rs2231142 | Toxicity | 4 | gefitinib | Lung Neoplasms |
| rs2231142 | Efficacy | 4 | capecitabine;fluorouracil;leucovorin;oxaliplatin | Colorectal Neoplasms |
| rs2231142 | Metabolism/PK | 4 | methotrexate | Acute lymphoblastic leukemia;Burkitt Lymphoma;Lymphoma;T-Cell;Osteosarcoma |
| rs2231142 | Toxicity | 4 | methotrexate | Acute lymphoblastic leukemia;Burkitt Lymphoma;Drug Toxicity;Lymphoma;T-Cell;Osteosarcoma |
| rs2231142 | Efficacy | 1A | allopurinol | Gout |
| rs2231142 | Dosage | 1A | allopurinol | Gout |
| rs2231142 | Efficacy | 2A | rosuvastatin | Hypercholesterolemia;Myocardial Infarction |
| rs2231142 | Toxicity | 3 | efavirenz | HIV infectious disease |
| rs2231142 | Efficacy | 3 | sulfasalazine | Rheumatoid arthritis |
PharmGKB variants
53 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs1061018 | ABCG2 | 3 | 0.00 | 1 | dasatinib;imatinib;nilotinib |
| rs1481012 | ABCG2 | 0.00 | 0 | ||
| rs2231135 | ABCG2 | 3 | 2.25 | 1 | methotrexate |
| rs2231137 | ABCG2 | 3 | 3.75 | 3 | irinotecan;dasatinib;imatinib;nilotinib;imatinib |
| rs2231142 | ABCG2 | 1A | 115.62 | 26 | rosuvastatin;atorvastatin;cyclophosphamide;doxorubicin;fluorouracil;allopurinol;simvastatin;fluvastatin;efavirenz;tenofovir;dolutegravir;Opioid anesthetics;Other general anesthetics;volatile anesthetics |
| rs2231148 | ABCG2 | 0.00 | 0 | ||
| rs2231164 | ABCG2 | 0.00 | 0 | ||
| rs2622604 | ABCG2 | 0.00 | 0 | ||
| rs2622628 | ABCG2 | 0.00 | 0 | ||
| rs2725252 | ABCG2 | 3 | 2.00 | 1 | imatinib |
| rs2725256 | ABCG2 | 0.00 | 0 | ||
| rs3109823 | ABCG2 | 0.00 | 0 | ||
| rs3114018 | ABCG2 | 0.00 | 0 | ||
| rs3114020 | ABCG2 | 3 | 0.75 | 1 | lamotrigine |
| rs3219191 | ABCG2 | 0.00 | 0 | ||
| rs4148157 | ABCG2 | 3 | 1.75 | 2 | allopurinol;topotecan |
| rs7699188 | ABCG2 | 3 | 6.00 | 1 | fluorouracil;irinotecan;leucovorin |
| rs10011796 | ABCG2 | 4 | -1.50 | 1 | allopurinol |
| rs12505410 | ABCG2 | 3 | 2.00 | 2 | methotrexate;imatinib |
| rs13120400 | ABCG2 | 3 | 4.25 | 5 | methotrexate;ceftriaxone;imatinib;deferasirox |
| rs17731538 | ABCG2 | 3 | 2.75 | 1 | methotrexate |
| rs17731799 | ABCG2 | 0.00 | 0 | ||
| rs41282401 | ABCG2 | 3 | 0.00 | 1 | dasatinib;imatinib;nilotinib |
| rs45605536 | ABCG2 | 3 | 0.00 | 1 | dasatinib;imatinib |
| rs58818712 | ABCG2 | 3 | 0.00 | 1 | dasatinib;imatinib |
| rs72552713 | ABCG2 | 3 | 0.12 | 1 | sulfasalazine |
| rs2725264 | ABCG2 | 0.00 | 0 | ||
| rs9999111 | ABCG2 | 0.00 | 0 | ||
| rs2725263 | ABCG2 | 0.00 | 0 | ||
| rs1564481 | ABCG2 | 0.00 | 0 | ||
| rs13137622 | ABCG2 | 3 | 2.00 | 1 | methotrexate |
| rs2622621 | ABCG2 | 0.00 | 0 | ||
| rs6857600 | ABCG2 | 0.00 | 0 | ||
| rs45499402 | ABCG2 | 0.00 | 0 | ||
| rs4148155 | ABCG2 | 3 | 0.00 | 1 | allopurinol |
| rs76979899 | ABCG2 | 3 | 0.00 | 1 | allopurinol |
| rs1448784 | ABCG2 | 0.00 | 0 | ||
| rs569310717 | ABCG2 | 0.00 | 0 | ||
| rs149106245 | ABCG2 | 0.00 | 0 | ||
| rs769734146 | ABCG2 | 0.00 | 0 |
PharmGKB dosing guidelines
3 guidelines.
| Source | Drug | Guideline | Dosing? | Recommendation? |
|---|---|---|---|---|
| CPIC | atorvastatin;fluvastatin;lovastatin;pitavastatin;pravastatin;simvastatin | Annotation of CPIC Guideline for atorvastatin, fluvastatin, lovastatin, pitavastatin, pravastatin, simvastatin and ABCG2 | ||
| CPIC | rosuvastatin | Annotation of CPIC Guideline for rosuvastatin and ABCG2, SLCO1B1 | yes | yes |
| DPWG | allopurinol | Annotation of DPWG Guideline for allopurinol and ABCG2 | yes | yes |
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: transporter — ABCG subfamily
Most potent curated ligand interactions (5 total), top 5:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| elacridar | Inhibition | 6.71 | pIC50 |
| cyclosporin A | Inhibition | 6.3 | pKi |
| KS 176 | Inhibition | 6.23 | pIC50 |
| compound 14 [PMID: 30925062] | Non-competitive | 5.62 | pIC50 |
| nobiletin | Inhibition | 5.36 | pIC50 |
Binding affinities (BindingDB)
48 measured of 52 human assays (53 total across all organisms); most potent 48 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value | Patent |
|---|---|---|---|
| 3-chloranyl-N-[2-chloranyl-5-(trifluoromethyl)phenyl]-6-(3,5-dimethylpyrazol-1-yl)pyridine-2-carboxamide | EC50 | 240 nM | |
| 2-methoxy-N-(2-morpholinophenyl)-5-(phthalimidomethyl)benzamide | EC50 | 340 nM | |
| (E)-3-[3-(4-methoxyphenyl)-1-phenyl-4-pyrazolyl]-1-[4-(2-pyridinyl)-1-piperazinyl]-2-propen-1-one | EC50 | 410 nM | |
| (4-cyanophenyl)methyl 3-nitro-4-pyrrolidin-1-yl-benzoate | EC50 | 450 nM | |
| N-[(E)-[3-[[4-(4-fluorophenyl)-1-piperazinyl]methyl]-4-methoxyphenyl]methylideneamino]-4-hydroxy-3-methoxybenzamide | EC50 | 760 nM | |
| Fumitremorgin C | IC50 | 790 nM | |
| (6E)-6-[4-(3,5-dimethyl-1-piperidinyl)-1H-quinazolin-2-ylidene]-2-methoxy-1-cyclohexa-2,4-dienone | EC50 | 1040 nM | |
| CHEMBL4209777 | IC50 | 1060 nM | |
| N-[5-(dimethylamino)-2-[4-morpholinyl-[3-(trifluoromethyl)anilino]phosphoryl]phenyl]-2-thiophenecarboxamide | EC50 | 1210 nM | |
| 3,4,5-trimethoxy-N-[4-(propan-2-ylsulfamoyl)phenyl]benzamide | EC50 | 1320 nM | |
| (6-nitro-4H-1,3-benzodioxin-8-yl)methyl 2-(benzenesulfonamido)-3-methylbutanoate | EC50 | 1570 nM | |
| 3-keto-2-(2-methoxyethyl)-N-p-phenetyl-isoindoline-4-carboxamide | EC50 | 1600 nM | |
| 2-[[1-oxo-2-(2-pyrimidinylthio)ethyl]amino]-6-(phenylmethyl)-5,7-dihydro-4H-thieno[2,3-c]pyridine-3-carboxylic acid ethyl ester | EC50 | 1880 nM | |
| (2S,5S,8S)-14-methoxy-5,13-dimethyl-2-(2-methylpropyl)-3,6,17-triazatetracyclo[8.7.0.03,8.011,16]heptadeca-1(10),11,13,15-tetraene-4,7-dione | IC50 | 1980 nM | US-9695174: Inhibitor of breast cancer resistance protein (BCRP) |
| N-[2-[diethylamino-[3-(trifluoromethyl)anilino]phosphoryl]-5-(dimethylamino)phenyl]-2-furamide | EC50 | 2290 nM | |
| NSC19139 | IC50 | 2600 nM | |
| 4-(dimethylamino)benzoic acid [2-(2-ethoxyanilino)-2-oxo-1-phenylethyl] ester | EC50 | 2750 nM | |
| tert-butyl 3-[(2S,5S,8S)-2-(2-methylpropyl)-4,7-dioxo-3,6,17-triazatetracyclo[8.7.0.03,8.011,16]heptadeca-1(10),11,13,15-tetraen-5-yl]propanoate | IC50 | 3250 nM | US-9695174: Inhibitor of breast cancer resistance protein (BCRP) |
| NSC375985 | IC50 | 3700 nM | |
| 2-[4-(4-cyanophenyl)phenoxy]-N-(2-phenylethyl)acetamide | EC50 | 3760 nM | |
| 2-[(2-fluoranyl-6-nitro-phenyl)methylsulfanyl]-4,6-dimethyl-pyridine-3-carbonitrile | EC50 | 3820 nM | |
| NSC168201 | IC50 | 3900 nM | |
| (4E)-4-(dimethylaminomethylene)-5-methyl-2-(4-nitrophenyl)-2-pyrazolin-3-one | EC50 | 4000 nM | |
| 2-fluoranyl-N-[(E)-[3-[[4-(4-fluorophenyl)piperazin-1-yl]methyl]-4-methoxy-phenyl]methylideneamino]benzamide | EC50 | 4070 nM | |
| NSC120688 | IC50 | 4300 nM | |
| 2-[7-[butyl(methyl)amino]-4,4a,5,6-tetrahydro-3H-naphthalen-2-ylidene]malononitrile | EC50 | 4420 nM | |
| cid_223753 | IC50 | 4500 nM | |
| NSC320852 | IC50 | 4600 nM | |
| 4-[1-[benzyl-[2-(2-thienyl)acetyl]amino]-2-(cyclohexylamino)-2-keto-ethyl]benzoic acid methyl ester | EC50 | 4600 nM | |
| 2-[[4-chloranyl-6-[(4-nitrophenyl)amino]-1,3,5-triazin-2-yl]amino]ethanol | EC50 | 4630 nM | |
| 3-(5-bromanylfuran-2-yl)-5-(2-nitrophenyl)-1,2,4-oxadiazole | EC50 | 4880 nM | |
| NSC306698 | IC50 | 5400 nM | |
| NSC303769 | IC50 | 5800 nM | |
| N-(4-fluorophenyl)-2-methyl-3-(2-pyridin-4-ylethyl)-1-indolizinecarboxamide | EC50 | 6840 nM | |
| (Z)-N-[(E)-2-(3,5-dibromo-4-hydroxyphenyl)ethenyl]-3-(4-hydroxyphenyl)-2-methoxyprop-2-enamide | IC50 | 6900 nM | US-8470888: Botryllamides and method of inhibiting PGP in a mammal afflicted with cancer |
| Digitonin | IC50 | 9700 nM | |
| (Z)-N-[(E)-2-(3,5-dibromo-4-methoxyphenyl)ethenyl]-3-(4-hydroxyphenyl)-2-methoxyprop-2-enamide | IC50 | 11200 nM | US-8470888: Botryllamides and method of inhibiting PGP in a mammal afflicted with cancer |
| Botryllamide B, 2 | IC50 | 11200 nM | |
| 3-(quinoxaline-2-carbonylamino)benzoic acid ethyl ester | EC50 | 11800 nM | |
| (2S,5S,8S)-14-methoxy-5-methyl-2-(2-methylpropyl)-3,6,17-triazatetracyclo[8.7.0.03,8.011,16]heptadeca-1(10),11,13,15-tetraene-4,7-dione | IC50 | 15400 nM | US-9695174: Inhibitor of breast cancer resistance protein (BCRP) |
| (Z)-N-[(E)-2-(3-bromo-4-methoxyphenyl)ethenyl]-3-(4-hydroxyphenyl)-2-methoxyprop-2-enamide | IC50 | 16400 nM | US-8470888: Botryllamides and method of inhibiting PGP in a mammal afflicted with cancer |
| Botryllamide D, 4 | IC50 | 16400 nM | |
| (Z)-3-(4-hydroxyphenyl)-N-[(E)-2-(4-hydroxyphenyl)ethenyl]-2-methoxyprop-2-enamide | IC50 | 16700 nM | US-8470888: Botryllamides and method of inhibiting PGP in a mammal afflicted with cancer |
| (Z)-3-(4-hydroxyphenyl)-2-methoxy-N-[(E)-2-(4-methoxyphenyl)ethenyl]prop-2-enamide | IC50 | 23300 nM | US-8470888: Botryllamides and method of inhibiting PGP in a mammal afflicted with cancer |
| 1-keto-7,8-dimethoxy-isothiochromene-3-carboxylic acid isopropyl ester | EC50 | 24400 nM | |
| Botryllamide J, 10 | IC50 | 26900 nM | |
| (Z)-3-(2-cyano-3-hydroxyphenyl)-2-methoxy-N-[(E)-2-phenylethenyl]prop-2-enamide | IC50 | 26900 nM | US-8470888: Botryllamides and method of inhibiting PGP in a mammal afflicted with cancer |
| Botryllamide I, 9 | IC50 | 41400 nM |
ChEMBL bioactivities
1955 potent at pChembl≥5 of 2203 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 10.99 | EC50 | 0.01019 | nM | CHEMBL2141796 |
| 10.99 | EC50 | 0.01013 | nM | CHEMBL2145384 |
| 10.96 | EC50 | 0.01088 | nM | CHEMBL2142245 |
| 10.92 | EC50 | 0.01209 | nM | CHEMBL2137928 |
| 10.64 | EC50 | 0.02297 | nM | CHEMBL2141666 |
| 10.63 | EC50 | 0.02338 | nM | CHEMBL2130718 |
| 10.39 | EC50 | 0.04032 | nM | CHEMBL2140166 |
| 10.39 | EC50 | 0.04093 | nM | CHEMBL2137680 |
| 10.35 | EC50 | 0.04419 | nM | CHEMBL2135227 |
| 10.32 | EC50 | 0.04775 | nM | CHEMBL2133727 |
| 9.60 | EC50 | 0.254 | nM | CHEMBL2132526 |
| 9.22 | EC50 | 0.6 | nM | CHEMBL4168440 |
| 9.05 | EC50 | 0.9 | nM | CHEMBL4561302 |
| 9.05 | EC50 | 0.9 | nM | CHEMBL4584493 |
| 8.96 | EC50 | 1.1 | nM | CHEMBL4453052 |
| 8.92 | EC50 | 1.2 | nM | CHEMBL4159635 |
| 8.85 | EC50 | 1.4 | nM | CHEMBL4561302 |
| 8.85 | EC50 | 1.4 | nM | CHEMBL4860031 |
| 8.82 | IC50 | 1.5 | nM | AVAPRITINIB |
| 8.80 | EC50 | 1.6 | nM | CHEMBL4860031 |
| 8.77 | EC50 | 1.7 | nM | CHEMBL4454217 |
| 8.70 | EC50 | 1.999 | nM | CHEMBL2133413 |
| 8.70 | EC50 | 2 | nM | CHEMBL4101737 |
| 8.70 | EC50 | 2 | nM | CHEMBL4172744 |
| 8.70 | EC50 | 2 | nM | CHEMBL4591134 |
| 8.70 | EC50 | 2 | nM | CHEMBL4454217 |
| 8.68 | EC50 | 2.1 | nM | CHEMBL4474920 |
| 8.66 | EC50 | 2.2 | nM | CHEMBL4442810 |
| 8.66 | EC50 | 2.2 | nM | CHEMBL4453052 |
| 8.64 | EC50 | 2.3 | nM | CHEMBL4591134 |
| 8.62 | EC50 | 2.4 | nM | CHEMBL4440681 |
| 8.62 | EC50 | 2.4 | nM | CHEMBL4592756 |
| 8.60 | EC50 | 2.5 | nM | CHEMBL4453052 |
| 8.55 | EC50 | 2.8 | nM | CHEMBL4545977 |
| 8.55 | EC50 | 2.8 | nM | CHEMBL4584493 |
| 8.52 | EC50 | 3 | nM | CHEMBL4073213 |
| 8.51 | EC50 | 3.1 | nM | CHEMBL4291291 |
| 8.48 | EC50 | 3.3 | nM | CHEMBL4454945 |
| 8.48 | EC50 | 3.3 | nM | CHEMBL4589907 |
| 8.46 | EC50 | 3.5 | nM | CHEMBL3092485 |
| 8.46 | EC50 | 3.5 | nM | CHEMBL4463713 |
| 8.46 | EC50 | 3.5 | nM | CHEMBL4877122 |
| 8.44 | EC50 | 3.6 | nM | CHEMBL4564209 |
| 8.41 | EC50 | 3.9 | nM | CHEMBL4472194 |
| 8.40 | EC50 | 4 | nM | CHEMBL4082228 |
| 8.40 | EC50 | 4 | nM | CHEMBL4081708 |
| 8.40 | EC50 | 4 | nM | CHEMBL4094899 |
| 8.40 | EC50 | 4 | nM | CHEMBL4091528 |
| 8.40 | EC50 | 4 | nM | CHEMBL4072298 |
| 8.40 | EC50 | 4 | nM | CHEMBL4176228 |
PubChem BioAssay actives
1905 with measured affinity, of 5039 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| N-(3-methylsulfanylphenyl)-2-(3-nitrophenyl)quinazolin-4-amine | 1501277: Activation of ABCG2 ATPase activity (unknown origin) expressed in baculovirus infected high5 cell membranes after 20 mins by ascorbic acid ammonia molybdate reaction based colorimetric assay | ec50 | 0.0006 | uM |
| methyl 3-[[2-[4-[2-[2-[2-[4-[4-[4-(6-methyl-4-oxochromen-2-yl)phenoxy]butyl]triazol-1-yl]ethoxy]ethoxy]ethoxy]phenyl]-4-oxochromen-3-yl]oxymethyl]benzoate | 1525920: Inhibition of BCRP in human MCF7/MX100 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assay | ec50 | 0.0009 | uM |
| methyl 3-[[4-oxo-2-[4-[2-[2-[2-[4-[4-(4-oxo-2-phenylchromen-7-yl)oxybutyl]triazol-1-yl]ethoxy]ethoxy]ethoxy]phenyl]chromen-3-yl]oxymethyl]benzoate | 1525919: Inhibition of BCRP (unknown origin) transfected in HEK293/R2 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assay | ec50 | 0.0009 | uM |
| methyl 3-[[2-[4-[2-[2-[4-[3-[1-[2-[2-[4-[3-[(3-methoxycarbonylphenyl)methoxy]-4-oxochromen-2-yl]phenoxy]ethoxy]ethyl]triazol-4-yl]phenyl]triazol-1-yl]ethoxy]ethoxy]phenyl]-4-oxochromen-3-yl]oxymethyl]benzoate | 1525920: Inhibition of BCRP in human MCF7/MX100 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assay | ec50 | 0.0011 | uM |
| N-(3,4-dimethoxyphenyl)-2-(4-methoxyphenyl)quinazolin-4-amine | 1501277: Activation of ABCG2 ATPase activity (unknown origin) expressed in baculovirus infected high5 cell membranes after 20 mins by ascorbic acid ammonia molybdate reaction based colorimetric assay | ec50 | 0.0012 | uM |
| methyl 3-[[2-[4-[2-[2-[2-[4-[[benzyl(2-hydroxyethyl)amino]methyl]triazol-1-yl]ethoxy]ethoxy]ethoxy]phenyl]-4-oxochromen-3-yl]oxymethyl]benzoate | 1769259: Inhibition of BCRP (unknown origin) transfected in HEK293/R2 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assay | ec50 | 0.0014 | uM |
| Avapritinib | 1916975: Inhibition of ABCG2 (unknown origin) | ic50 | 0.0015 | uM |
| methyl 3-[[4-oxo-2-[4-[2-[2-[2-[4-[2-(4-oxo-2-phenylchromen-7-yl)oxyethoxymethyl]triazol-1-yl]ethoxy]ethoxy]ethoxy]phenyl]chromen-3-yl]oxymethyl]benzoate | 1525919: Inhibition of BCRP (unknown origin) transfected in HEK293/R2 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assay | ec50 | 0.0017 | uM |
| 4-[[2-(3-methoxyphenyl)pyrido[2,3-d]pyrimidin-4-yl]amino]phenol | 1479734: Activation of recombinant human ABCG2 ATPase activity expressed in baculovirus infected High five insect cell membranes after 20 mins by ascorbic acid ammonia molybdate reaction-based colorimetric method | ec50 | 0.0020 | uM |
| N,2-bis(3-nitrophenyl)quinazolin-4-amine | 1501277: Activation of ABCG2 ATPase activity (unknown origin) expressed in baculovirus infected high5 cell membranes after 20 mins by ascorbic acid ammonia molybdate reaction based colorimetric assay | ec50 | 0.0020 | uM |
| methyl 3-[[2-[4-[2-[2-[2-[4-[3-[4-(7-fluoro-4-oxochromen-2-yl)phenoxy]propyl]triazol-1-yl]ethoxy]ethoxy]ethoxy]phenyl]-4-oxochromen-3-yl]oxymethyl]benzoate | 1525919: Inhibition of BCRP (unknown origin) transfected in HEK293/R2 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assay | ec50 | 0.0020 | uM |
| methyl 3-[[2-[4-[2-[2-[4-[[1-[2-[2-[4-[3-[(3-methoxycarbonylphenyl)methoxy]-4-oxochromen-2-yl]phenoxy]ethoxy]ethyl]triazol-4-yl]methoxymethyl]triazol-1-yl]ethoxy]ethoxy]phenyl]-4-oxochromen-3-yl]oxymethyl]benzoate | 1525920: Inhibition of BCRP in human MCF7/MX100 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assay | ec50 | 0.0021 | uM |
| methyl 3-[[2-[4-[2-[2-[4-[[N-[[1-[2-[2-[4-[3-[(3-methoxycarbonylphenyl)methoxy]-4-oxochromen-2-yl]phenoxy]ethoxy]ethyl]triazol-4-yl]methyl]anilino]methyl]triazol-1-yl]ethoxy]ethoxy]phenyl]-4-oxochromen-3-yl]oxymethyl]benzoate | 1525920: Inhibition of BCRP in human MCF7/MX100 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assay | ec50 | 0.0022 | uM |
| methyl 3-[[2-[4-[2-[2-[4-[3-[1-[2-[2-[4-[3-[(3-methoxycarbonylphenyl)methoxy]-4-oxochromen-2-yl]phenoxy]ethoxy]ethyl]triazol-4-yl]propyl]triazol-1-yl]ethoxy]ethoxy]phenyl]-4-oxochromen-3-yl]oxymethyl]benzoate | 1525920: Inhibition of BCRP in human MCF7/MX100 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assay | ec50 | 0.0024 | uM |
| methyl 3-[[2-[4-[2-[2-[2-[4-[4-[1-[2-[2-[2-[4-[3-[(3-methoxycarbonylphenyl)methoxy]-4-oxochromen-2-yl]phenoxy]ethoxy]ethoxy]ethyl]triazol-4-yl]phenyl]triazol-1-yl]ethoxy]ethoxy]ethoxy]phenyl]-4-oxochromen-3-yl]oxymethyl]benzoate | 1525919: Inhibition of BCRP (unknown origin) transfected in HEK293/R2 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assay | ec50 | 0.0024 | uM |
| methyl 3-[[2-[4-[2-[2-[2-[4-[3-[1-[2-[2-[2-[4-[3-[(3-methoxycarbonylphenyl)methoxy]-4-oxochromen-2-yl]phenoxy]ethoxy]ethoxy]ethyl]triazol-4-yl]phenyl]triazol-1-yl]ethoxy]ethoxy]ethoxy]phenyl]-4-oxochromen-3-yl]oxymethyl]benzoate | 1525919: Inhibition of BCRP (unknown origin) transfected in HEK293/R2 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assay | ec50 | 0.0028 | uM |
| 4-[[2-(3-methoxyphenyl)pyrido[2,3-d]pyrimidin-4-yl]amino]benzonitrile | 1479734: Activation of recombinant human ABCG2 ATPase activity expressed in baculovirus infected High five insect cell membranes after 20 mins by ascorbic acid ammonia molybdate reaction-based colorimetric method | ec50 | 0.0030 | uM |
| 7-fluoro-2-[4-[3-[1-[2-[2-[2-[4-(6-fluoro-4-oxochromen-2-yl)phenoxy]ethoxy]ethoxy]ethyl]triazol-4-yl]propoxy]phenyl]chromen-4-one | 1525919: Inhibition of BCRP (unknown origin) transfected in HEK293/R2 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assay | ec50 | 0.0031 | uM |
| methyl 3-[[2-[4-[2-[2-[2-[4-[[benzyl-[[1-[2-[2-[2-[4-[3-[(3-methoxycarbonylphenyl)methoxy]-4-oxochromen-2-yl]phenoxy]ethoxy]ethoxy]ethyl]triazol-4-yl]methyl]amino]methyl]triazol-1-yl]ethoxy]ethoxy]ethoxy]phenyl]-4-oxochromen-3-yl]oxymethyl]benzoate | 1525919: Inhibition of BCRP (unknown origin) transfected in HEK293/R2 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assay | ec50 | 0.0033 | uM |
| methyl 3-[[2-[4-[2-[2-[4-[[benzyl-[[1-[2-[2-[4-[3-[(3-methoxycarbonylphenyl)methoxy]-4-oxochromen-2-yl]phenoxy]ethoxy]ethyl]triazol-4-yl]methyl]amino]methyl]triazol-1-yl]ethoxy]ethoxy]phenyl]-4-oxochromen-3-yl]oxymethyl]benzoate | 1525920: Inhibition of BCRP in human MCF7/MX100 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assay | ec50 | 0.0033 | uM |
| methyl 3-[[4-oxo-2-[4-[2-[2-[2-[4-[3-(4-oxo-2-phenylchromen-7-yl)oxypropyl]triazol-1-yl]ethoxy]ethoxy]ethoxy]phenyl]chromen-3-yl]oxymethyl]benzoate | 1525919: Inhibition of BCRP (unknown origin) transfected in HEK293/R2 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assay | ec50 | 0.0035 | uM |
| methyl 3-[[2-[4-[2-[2-[4-[[benzyl(methyl)amino]methyl]triazol-1-yl]ethoxy]ethoxy]phenyl]-4-oxochromen-3-yl]oxymethyl]benzoate | 1769261: Inhibition of BCRP (unknown origin) expressed in MCF7/MX100 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assay | ec50 | 0.0035 | uM |
| 2-(3,4-dimethoxyphenyl)-N-(3-nitrophenyl)quinazolin-4-amine | 1501277: Activation of ABCG2 ATPase activity (unknown origin) expressed in baculovirus infected high5 cell membranes after 20 mins by ascorbic acid ammonia molybdate reaction based colorimetric assay | ec50 | 0.0035 | uM |
| methyl 3-[[2-[4-[2-[2-[4-[4-[4-(6-methyl-4-oxochromen-2-yl)phenoxy]butyl]triazol-1-yl]ethoxy]ethoxy]phenyl]-4-oxochromen-3-yl]oxymethyl]benzoate | 1525919: Inhibition of BCRP (unknown origin) transfected in HEK293/R2 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assay | ec50 | 0.0036 | uM |
| methyl 3-[[2-[4-[2-[2-[2-[4-[[N-[[1-[2-[2-[2-[4-[3-[(3-methoxycarbonylphenyl)methoxy]-4-oxochromen-2-yl]phenoxy]ethoxy]ethoxy]ethyl]triazol-4-yl]methyl]anilino]methyl]triazol-1-yl]ethoxy]ethoxy]ethoxy]phenyl]-4-oxochromen-3-yl]oxymethyl]benzoate | 1525920: Inhibition of BCRP in human MCF7/MX100 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assay | ec50 | 0.0039 | uM |
| tert-butyl 3-[(2S,5S,8S)-14-methoxy-2-(2-methylpropyl)-4,7-dioxo-3,6,17-triazatetracyclo[8.7.0.03,8.011,16]heptadeca-1(10),11,13,15-tetraen-5-yl]propanoate | 1635795: Inhibition of human ABCG2 expressed in baculovirus infected Sf9 cell membrane assessed as inhibition of vanadate sensitive basal ATPase activity after 20 mins by colorimetric method | ic50 | 0.0040 | uM |
| N-(3-nitrophenyl)-2-pyridin-3-ylpyrido[2,3-d]pyrimidin-4-amine | 1479734: Activation of recombinant human ABCG2 ATPase activity expressed in baculovirus infected High five insect cell membranes after 20 mins by ascorbic acid ammonia molybdate reaction-based colorimetric method | ec50 | 0.0040 | uM |
| N-(3-nitrophenyl)-2-pyridin-4-ylquinazolin-4-amine | 1447895: Activation of ABCG2 (unknown origin) ATPase activity expressed in baculovirus infected high five cell membranes by ascorbic acid/ammonia molybdate reaction-based colorimetric analysis | ec50 | 0.0040 | uM |
| 4-[(2-pyridin-3-ylquinazolin-4-yl)amino]benzonitrile | 1447895: Activation of ABCG2 (unknown origin) ATPase activity expressed in baculovirus infected high five cell membranes by ascorbic acid/ammonia molybdate reaction-based colorimetric analysis | ec50 | 0.0040 | uM |
| N-(4-fluorophenyl)-2-(3-methoxyphenyl)pyrido[2,3-d]pyrimidin-4-amine | 1479734: Activation of recombinant human ABCG2 ATPase activity expressed in baculovirus infected High five insect cell membranes after 20 mins by ascorbic acid ammonia molybdate reaction-based colorimetric method | ec50 | 0.0040 | uM |
| 3-[[2-(3-methoxyphenyl)pyrido[2,3-d]pyrimidin-4-yl]amino]benzonitrile | 1479734: Activation of recombinant human ABCG2 ATPase activity expressed in baculovirus infected High five insect cell membranes after 20 mins by ascorbic acid ammonia molybdate reaction-based colorimetric method | ec50 | 0.0040 | uM |
| N-(3,4-dimethoxyphenyl)-2-(3-methoxyphenyl)quinazolin-4-amine | 1501277: Activation of ABCG2 ATPase activity (unknown origin) expressed in baculovirus infected high5 cell membranes after 20 mins by ascorbic acid ammonia molybdate reaction based colorimetric assay | ec50 | 0.0040 | uM |
| N-(4-bromo-3-methoxyphenyl)-2-(3,4-dimethoxyphenyl)quinazolin-4-amine | 1501277: Activation of ABCG2 ATPase activity (unknown origin) expressed in baculovirus infected high5 cell membranes after 20 mins by ascorbic acid ammonia molybdate reaction based colorimetric assay | ec50 | 0.0040 | uM |
| 2-(3-methoxyphenyl)-N-(3-nitrophenyl)quinazolin-4-amine | 1501277: Activation of ABCG2 ATPase activity (unknown origin) expressed in baculovirus infected high5 cell membranes after 20 mins by ascorbic acid ammonia molybdate reaction based colorimetric assay | ec50 | 0.0040 | uM |
| methyl 3-[[4-oxo-2-[4-[2-[2-[4-[2-(4-oxo-2-phenylchromen-7-yl)oxyethoxymethyl]triazol-1-yl]ethoxy]ethoxy]phenyl]chromen-3-yl]oxymethyl]benzoate | 1525919: Inhibition of BCRP (unknown origin) transfected in HEK293/R2 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assay | ec50 | 0.0041 | uM |
| 2-[(2S,5S,8S)-14-methoxy-2-(2-methylpropyl)-4,7-dioxo-3,6,17-triazatetracyclo[8.7.0.03,8.011,16]heptadeca-1(10),11,13,15-tetraen-5-yl]ethyl 2,2-dimethylpropanoate | 1668468: Reversal of human ABCG2-mediated multidrug resistance in HEK293/R482 cells assessed as effect on mitoxantrone-induced cytotoxicity by measuring mitoxantrone IC50 at 1 uM after 72 hrs by CCK8 assay (Rvb = 50.66 +/- 6.88 nM) | ic50 | 0.0046 | uM |
| 2-(3,4-dimethoxyphenyl)-N-(4-nitrophenyl)quinazolin-4-amine | 1501277: Activation of ABCG2 ATPase activity (unknown origin) expressed in baculovirus infected high5 cell membranes after 20 mins by ascorbic acid ammonia molybdate reaction based colorimetric assay | ec50 | 0.0047 | uM |
| N-(4-nitrophenyl)-2-phenylpyrido[2,3-d]pyrimidin-4-amine | 1479734: Activation of recombinant human ABCG2 ATPase activity expressed in baculovirus infected High five insect cell membranes after 20 mins by ascorbic acid ammonia molybdate reaction-based colorimetric method | ec50 | 0.0050 | uM |
| 2-nitro-4-[[2-(3-nitrophenyl)quinazolin-4-yl]amino]phenol | 1501277: Activation of ABCG2 ATPase activity (unknown origin) expressed in baculovirus infected high5 cell membranes after 20 mins by ascorbic acid ammonia molybdate reaction based colorimetric assay | ec50 | 0.0050 | uM |
| tert-butyl 3-[(2S,5S,8S)-14-methoxy-2-(2-methylpropyl)-7-oxo-3,6,17-triazatetracyclo[8.7.0.03,8.011,16]heptadeca-1(10),11,13,15-tetraen-5-yl]propanoate | 1769268: Inhibition of BCRP (unknown origin) expressed in human HEK293/R2 cells assessed as reversal of mitoxantrone resistance after 5 days by MTS/PMS assay | ec50 | 0.0050 | uM |
| methyl 3-[[4-oxo-2-[4-[2-[2-[4-[4-(4-oxo-2-phenylchromen-7-yl)oxybutyl]triazol-1-yl]ethoxy]ethoxy]phenyl]chromen-3-yl]oxymethyl]benzoate | 1525919: Inhibition of BCRP (unknown origin) transfected in HEK293/R2 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assay | ec50 | 0.0052 | uM |
| 2-(3-methoxyphenyl)-N-(4-nitrophenyl)quinazolin-4-amine | 1501277: Activation of ABCG2 ATPase activity (unknown origin) expressed in baculovirus infected high5 cell membranes after 20 mins by ascorbic acid ammonia molybdate reaction based colorimetric assay | ec50 | 0.0060 | uM |
| methyl 3-[[2-[4-[4-(1-benzyltriazol-4-yl)butoxy]phenyl]-4-oxochromen-3-yl]oxymethyl]benzoate | 1769261: Inhibition of BCRP (unknown origin) expressed in MCF7/MX100 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assay | ec50 | 0.0060 | uM |
| (E)-3-[4-hydroxy-2-methoxy-5-(2-methylbut-3-en-2-yl)phenyl]-1-(4-hydroxyphenyl)prop-2-en-1-one | 1668466: Reversal of human ABCG2-mediated multidrug resistance in HEK293/R482 cells assessed as effect on mitoxantrone-induced cytotoxicity by measuring mitoxantrone IC50 at 3 uM after 72 hrs by CCK8 assay (Rvb = 50.66 +/- 6.88 nM) | ic50 | 0.0062 | uM |
| 7-[2-[2-[4-[3-[4-(7-fluoro-4-oxochromen-2-yl)phenoxy]propyl]triazol-1-yl]ethoxy]ethoxy]-2-phenylchromen-4-one | 1525919: Inhibition of BCRP (unknown origin) transfected in HEK293/R2 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assay | ec50 | 0.0064 | uM |
| methyl 3-[[2-[4-[2-[2-[4-[3-[4-(7-fluoro-4-oxochromen-2-yl)phenoxy]propyl]triazol-1-yl]ethoxy]ethoxy]phenyl]-4-oxochromen-3-yl]oxymethyl]benzoate | 1525920: Inhibition of BCRP in human MCF7/MX100 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assay | ec50 | 0.0065 | uM |
| 2-nitro-4-[(2-pyridin-3-ylquinazolin-4-yl)amino]phenol | 1447895: Activation of ABCG2 (unknown origin) ATPase activity expressed in baculovirus infected high five cell membranes by ascorbic acid/ammonia molybdate reaction-based colorimetric analysis | ec50 | 0.0070 | uM |
| methyl 3-[[4-oxo-2-[4-[2-[2-[4-[3-(4-oxo-2-phenylchromen-7-yl)oxypropyl]triazol-1-yl]ethoxy]ethoxy]phenyl]chromen-3-yl]oxymethyl]benzoate | 1525919: Inhibition of BCRP (unknown origin) transfected in HEK293/R2 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assay | ec50 | 0.0072 | uM |
| 7-fluoro-2-[4-[3-[1-[2-[2-[4-(4-oxochromen-2-yl)phenoxy]ethoxy]ethyl]triazol-4-yl]propoxy]phenyl]chromen-4-one | 1525919: Inhibition of BCRP (unknown origin) transfected in HEK293/R2 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assay | ec50 | 0.0072 | uM |
| 7-fluoro-2-[4-[3-[1-[2-[2-[2-[4-(4-oxochromen-2-yl)phenoxy]ethoxy]ethoxy]ethyl]triazol-4-yl]propoxy]phenyl]chromen-4-one | 1525920: Inhibition of BCRP in human MCF7/MX100 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assay | ec50 | 0.0074 | uM |
CTD chemical–gene interactions
307 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Mitoxantrone | increases transport, decreases activity, decreases export, affects export, decreases abundance (+12 more) | 24 |
| 3-(6-isobutyl-9-methoxy-1,4-dioxo-1,2,3,4,6,7,12,12a-octahydropyrazino(1’,2’-1,6)pyrido(3,4-b)indol-3-yl)propionic acid tert-butyl ester | decreases export, decreases activity, increases expression, affects reaction, decreases reaction (+6 more) | 14 |
| Tetrachlorodibenzodioxin | decreases reaction, increases expression, affects cotreatment | 12 |
| Benzo(a)pyrene | decreases activity, decreases methylation, increases activity, increases reaction, increases expression (+4 more) | 11 |
| Estradiol | increases expression, increases reaction, affects transport, decreases reaction, increases uptake (+6 more) | 11 |
| Cisplatin | affects expression, affects response to substance, decreases expression, affects cotreatment, decreases response to substance (+2 more) | 10 |
| Methotrexate | increases export, affects response to substance, decreases response to substance, increases transport, decreases reaction (+3 more) | 10 |
| tryptoquivaline | increases export, affects transport, affects uptake, decreases activity, decreases export (+2 more) | 9 |
| bisbenzimide ethoxide trihydrochloride | decreases activity, decreases export, decreases abundance, increases transport, increases reaction (+6 more) | 9 |
| Irinotecan | affects response to substance, affects metabolic processing, increases response to substance, affects export, decreases response to substance (+2 more) | 9 |
| Doxorubicin | affects transport, affects localization, affects cotreatment, decreases reaction, increases export (+7 more) | 9 |
| Topotecan | increases expression, affects export, increases response to substance, decreases activity, decreases export (+6 more) | 9 |
| estrone sulfate | decreases reaction, affects export, affects transport, increases export, increases transport (+2 more) | 7 |
| Sulfasalazine | decreases reaction, increases expression, increases activity, increases transport, affects cotreatment (+4 more) | 7 |
| Valproic Acid | affects cotreatment, increases expression, affects expression | 7 |
| Cyclosporine | decreases reaction, increases export, increases transport, decreases activity, increases expression (+2 more) | 7 |
| 2-amino-1-methyl-6-phenylimidazo(4,5-b)pyridine | increases secretion, decreases reaction, increases expression, affects transport, increases export (+4 more) | 6 |
| Resveratrol | increases export, decreases expression, affects transport, increases transport, increases expression (+2 more) | 5 |
| Arsenic Trioxide | affects expression, decreases expression, increases expression, decreases reaction, increases reaction | 5 |
| Fulvestrant | affects cotreatment, increases expression, affects response to substance, affects reaction, decreases expression (+1 more) | 5 |
| Cadmium | decreases uptake, affects cotreatment, increases abundance, affects response to substance, affects uptake (+3 more) | 5 |
| Fluorouracil | decreases expression, decreases reaction, decreases response to substance, affects cotreatment, affects response to substance (+1 more) | 5 |
| Tobacco Smoke Pollution | increases expression, increases reaction, affects expression, decreases reaction, increases export | 5 |
| Cadmium Chloride | affects response to substance, decreases response to substance, decreases activity, affects cotreatment, decreases expression (+7 more) | 5 |
| bisphenol A | increases transport, decreases activity, decreases transport, decreases expression, affects reaction (+1 more) | 4 |
| chrysin | decreases expression, increases expression, decreases reaction, increases secretion, increases transport (+2 more) | 4 |
| Acetaminophen | decreases expression, decreases activity, increases expression | 4 |
| Chlorpyrifos | decreases response to substance, increases expression, affects cotreatment, affects expression | 4 |
| Novobiocin | decreases activity, decreases reaction, decreases export, increases abundance, increases uptake | 4 |
| Phenobarbital | affects expression, increases expression | 4 |
ChEMBL screening assays
878 unique, capped per target: 651 binding, 115 admet, 111 functional, 1 toxicity
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1035250 | Binding | Inhibition of BCRP expressed in human MCF7 MX cells at 31.6 uM by Hoechst 33342 staining relative to 10 uM XR9577 | Aromatic 2-(thio)ureidocarboxylic acids as a new family of modulators of multidrug resistance-associated protein 1: synthesis, biological evaluation, and structure-activity relationships. — J Med Chem |
| CHEMBL1743158 | ADMET | Substrates of transporters of clinical importance in the absorption and disposition of drugs, BCRP | Membrane transporters in drug development. — Nat Rev Drug Discov |
| CHEMBL2075183 | Functional | TP_TRANSPORTER: inhibition of mitoxantrone efflux in BCRP-expressing MCF7-MX cells | Transport of glyburide by placental ABC transporters: implications in fetal drug exposure. — Placenta |
Cellosaurus cell lines
19 cell lines: 16 cancer cell line, 2 spontaneously immortalized cell line, 1 induced pluripotent stem cell
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_0H87 | S1-M1-80 | Cancer cell line | Female |
| CVCL_5227 | OCI-AML3/HaABCG2 clone 6.2 | Cancer cell line | Male |
| CVCL_A2KC | MDCK-hBCRP cMDR1-KO | Spontaneously immortalized cell line | Female |
| CVCL_A5XR | NCI-H460/TPT10 ABCG2 KO | Cancer cell line | Male |
| CVCL_B1EH | Abcam A-549 ABCG2 KO | Cancer cell line | Male |
| CVCL_B5ZS | C2BBe1 BCRP KO | Cancer cell line | Male |
| CVCL_B5ZU | C2BBe1 MDR1/BCRP KO | Cancer cell line | Male |
| CVCL_B5ZX | C2BBe1 MRP2/BCRP KO | Cancer cell line | Male |
| CVCL_B6A8 | HepaRG BCRP KO | Cancer cell line | Female |
| CVCL_D6NG | OCI-AML3/HaABCG2 clone 3.3 | Cancer cell line | Male |
Clinical trials (associated diseases)
164 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00414440 | PHASE4 | COMPLETED | Efficacy, Safety and Tolerability of Everolimus in Preventing End-stage Renal Disease in Patients With Autosomal Dominant Polycystic Kidney Disease |
| NCT03273413 | PHASE4 | ACTIVE_NOT_RECRUITING | Statin Therapy in Patients With Early Stage ADPKD |
| NCT03949894 | PHASE4 | COMPLETED | Evaluating the Safety and effectivenesS in Adult KorEaN Patients Treated With Tolvaptan for Management of Autosomal domInAnt poLycystic Kidney Disease |
| NCT02562170 | PHASE4 | COMPLETED | Protexa® Versus TiLoopBra® in Immediate Breast Reconstruction- A Pilot Study |
| NCT00309283 | PHASE3 | COMPLETED | Somatostatin in Polycystic Kidney: a Long-term Three Year Follow up Study |
| NCT00346918 | PHASE3 | COMPLETED | Sirolimus (Rapamune®) for Autosomal Dominant Polycystic Kidney Disease (ADPKD) |
| NCT00428948 | PHASE3 | COMPLETED | Tolvaptan Phase 3 Efficacy and Safety Study in Autosomal Dominant Polycystic Kidney Disease (ADPKD) |
| NCT01022424 | PHASE3 | COMPLETED | A Long-term Administration Study of OPC-41061 in Patients With Autosomal Dominant Polycystic Kidney Disease (ADPKD) (2) [Extension of Study 156-05-002] |
| NCT01214421 | PHASE3 | COMPLETED | Tolvaptan Extension Study in Participants With ADPKD |
| NCT01377246 | PHASE3 | COMPLETED | Somatostatin In Patients With Autosomal Dominant Polycystic Kidney Disease And Moderate To Severe Renal Insufficiency |
| NCT01616927 | PHASE3 | UNKNOWN | Study of Lanreotide to Treat Polycystic Kidney Disease |
| NCT01853553 | PHASE3 | COMPLETED | Mineralocorticoid Antagonism and Endothelial Dysfunction in Autosomal Dominant Polycystic Kidney Disease (ADPKD) |
| NCT02115659 | PHASE3 | UNKNOWN | Triptolide-Containing Formulation as Treatment for Autosomal Dominant Polycystic Kidney Disease (ADPKD) |
| NCT02134899 | PHASE3 | COMPLETED | The Efficacy of Everolimus in Reducing Total Native Kidney Volume in Polycystic Kidney Disease Transplanted Recipients |
| NCT02160145 | PHASE3 | COMPLETED | Efficacy and Safety of Tolvaptan in Subjects With Chronic Kidney Disease Between Late Stage 2 to Early Stage 4 Due to Autosomal Dominant Polycystic Kidney Disease |
| NCT02964273 | PHASE3 | COMPLETED | Safety, Pharmacokinetics, Tolerability and Efficacy of Tolvaptan in Children and Adolescents With ADPKD (Autosomal Dominant Polycystic Kidney Disease) |
| NCT03764605 | PHASE3 | UNKNOWN | Metformin vs Tolvaptan for Treatment of Autosomal Dominant Polycystic Kidney Disease |
| NCT03918447 | PHASE3 | TERMINATED | A Trial of Bardoxolone Methyl in Patients With ADPKD - FALCON |
| NCT04064346 | PHASE3 | TERMINATED | Efficacy and Safety of Lixivaptan in the Treatment of Autosomal Dominant Polycystic Kidney Disease |
| NCT04152837 | PHASE3 | TERMINATED | Safety of Lixivaptan in Subjects Previously Treated With Tolvaptan for Autosomal Dominant Polycystic Kidney Disease |
| NCT04939935 | PHASE3 | RECRUITING | Implementation of Metformin theraPy to Ease Decline of Kidney Function in Polycystic Kidney Disease (IMPEDE-PKD) |
| NCT05373264 | PHASE3 | RECRUITING | HYDROchlorothiazide to PROTECT Polycystic Kidney Disease Patients and Improve Their Quality of Life |
| NCT00673335 | PHASE3 | COMPLETED | Letrozole in Preventing Breast Cancer in Postmenopausal Women With a BRCA1 or BRCA2 Mutation |
| NCT00685256 | PHASE3 | COMPLETED | Standard Genetic Counseling With or Without a Decision Guide in Improving Communication Between Mothers Undergoing BRCA1/2 Testing and Their Minor-Age Children |
| NCT03162276 | PHASE3 | UNKNOWN | Trial of Inquiry Based Stress Reduction (IBSR) Program for BRCA1/2 Mutation Carriers |
| NCT00841568 | PHASE2 | COMPLETED | A Long-term Administration Study of OPC-41061 in Patients With Autosomal Dominant Polycystic Kidney Disease (ADPKD) [Extension of Study 156-04-001] |
| NCT01210560 | PHASE2 | COMPLETED | Dose-finding Study of New Tolvaptan Formulation in Subjects With ADPKD |
| NCT01336972 | PHASE2 | COMPLETED | Short-term Renal Hemodynamic Effects of Tolvaptan in Subjects With Autosomal Dominant Polycystic Kidney Disease (ADPKD) |
| NCT01451827 | PHASE2 | COMPLETED | 8-Week Study of Tolvaptan Dose Forms in Autosomal Dominant Polycystic Kidney Disease (ADPKD) |
| NCT01670110 | PHASE2 | COMPLETED | Pasireotide LAR in Severe Polycystic Liver Disease |
| NCT01932450 | PHASE2 | UNKNOWN | Radiofrequency Ablation for ADPKD Blood Pressure and Disease Progression Control |
| NCT02527863 | PHASE2 | COMPLETED | Effect of the Aquaretic Tolvaptan on Nitric Oxide System |
| NCT02616055 | PHASE2 | TERMINATED | Long-Term Treatment and Follow up of Subjects Completing 24 Months of Treatment With Tesevatinib on Study KD019-101 |
| NCT03203642 | PHASE2 | COMPLETED | Study of the Efficacy and Safety of Tesevatinib in Subjects With ADPKD |
| NCT03487913 | PHASE2 | COMPLETED | The ELiSA Study - Evaluation of Lixivaptan in Subjects With Autosomal Dominant Polycystic Kidney Disease |
| NCT03541447 | PHASE2 | COMPLETED | Tolvaptan-Octreotide LAR Combination in ADPKD |
| NCT04284657 | PHASE2 | COMPLETED | Pravastatin and Alkali Therapy in Patients With Autosomal Dominant Polycystic Kidney Disease |
| NCT04578548 | PHASE2 | TERMINATED | A Study to Evaluate the Effects of GLPG2737 in Participants With Autosomal Dominant Polycystic Kidney Disease (ADPKD) |
| NCT05190744 | PHASE2 | COMPLETED | Probenecid (PB) to Treat Hereditary Nephrogenic Diabetes Insipidus (NDI), ADPKD Treated With Tolvaptan, and Severely Polyuric Patients With Previous Lithium Administration |
| NCT05870007 | PHASE2 | ENROLLING_BY_INVITATION | Atorvastatin and Alkali Therapy in Patients With Autosomal Dominant Polycystic Kidney Disease |
Related Atlas pages
- Targeted by drugs: Cyclosporine
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): autosomal dominant polycystic kidney disease, chromosome 4q21 deletion syndrome, nephrolithiasis, ovarian cancer, ovarian carcinoma