ABCG2

gene
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Also known as EST157481MXRBCRPABCPCD338

Summary

ABCG2 (ATP binding cassette subfamily G member 2 (JR blood group), HGNC:74) is a protein-coding gene on chromosome 4q22.1, encoding Broad substrate specificity ATP-binding cassette transporter ABCG2 (Q9UNQ0). Broad substrate specificity ATP-dependent transporter of the ATP-binding cassette (ABC) family that actively extrudes a wide variety of physiological compounds, dietary toxins and xenobiotics from cells.

The membrane-associated protein encoded by this gene is included in the superfamily of ATP-binding cassette (ABC) transporters. ABC proteins transport various molecules across extra- and intra-cellular membranes. ABC genes are divided into seven distinct subfamilies (ABC1, MDR/TAP, MRP, ALD, OABP, GCN20, White). This protein is a member of the White subfamily. Alternatively referred to as a breast cancer resistance protein, this protein functions as a xenobiotic transporter which may play a major role in multi-drug resistance. It likely serves as a cellular defense mechanism in response to mitoxantrone and anthracycline exposure. Significant expression of this protein has been observed in the placenta, which may suggest a potential role for this molecule in placenta tissue. Multiple transcript variants encoding different isoforms have been found for this gene.

Source: NCBI Gene 9429 — RefSeq curated summary.

At a glance

  • GWAS associations: 96
  • Clinical variants (ClinVar): 97 total — 14 pathogenic, 1 likely-pathogenic
  • Phenotypes (HPO): 5
  • Druggable target: yes — 92 molecules with ChEMBL bioactivity
  • MANE Select transcript: NM_004827

Identifiers

Gene identifiers

FieldValue
HGNC IDHGNC:74
Approved symbolABCG2
NameATP binding cassette subfamily G member 2 (JR blood group)
Location4q22.1
Locus typegene with protein product
StatusApproved
AliasesEST157481, MXR, BCRP, ABCP, CD338
Ensembl geneENSG00000118777
Ensembl biotypeprotein_coding
OMIM603756
Entrez9429

Gene structure

Transcript identifiers

Ensembl transcripts: 31 — 31 protein_coding

ENST00000237612, ENST00000503830, ENST00000505480, ENST00000515655, ENST00000650821, ENST00000889078, ENST00000889079, ENST00000889080, ENST00000889081, ENST00000889082, ENST00000889083, ENST00000889084, ENST00000889085, ENST00000889086, ENST00000889087, ENST00000889088, ENST00000889089, ENST00000889090, ENST00000889091, ENST00000889092, ENST00000889093, ENST00000889094, ENST00000889095, ENST00000889096, ENST00000889097, ENST00000889098, ENST00000889099, ENST00000889100, ENST00000962213, ENST00000962214, ENST00000962215

RefSeq mRNA: 7 — MANE Select: NM_004827 NM_001257386, NM_001348985, NM_001348986, NM_001348987, NM_001348988, NM_001348989, NM_004827

CCDS: CCDS3628, CCDS58910

Canonical transcript exons

ENST00000237612 — 16 exons

ExonStartEnd
ENSE000008011808809552088095609
ENSE000008011818809745388097607
ENSE000008011828809932488099448
ENSE000008011838810123088101319
ENSE000008011848810718488107266
ENSE000008011858811330388113553
ENSE000008011868811495788115058
ENSE000008011878811810988118260
ENSE000008011888812163588121792
ENSE000008011898813106188131213
ENSE000008011908813180388131917
ENSE000008011918813257688132635
ENSE000011962208809026988092381
ENSE000013429698815838688158639
ENSE000034654568813979388140014
ENSE000035012948809457788094659

Expression profiles

Bgee: expression breadth ubiquitous, 245 present calls, max score 98.97.

FANTOM5 (CAGE): breadth broad, TPM avg 4.4675 / max 251.9052, expressed in 755 samples.

FANTOM5 promoters (16 alternative TSS)

Promoter IDTPM avgSamples expressed
530721.3827451
530701.1039397
530660.4975171
530690.3850139
530760.3049124
530670.2214126
530710.163170
530750.128347
530680.102457
530780.048115

Top tissues by expression

290 total, by Bgee expression score (0-100, higher = more expressed):

TissueAnatomy IDExpression scoreQuality
jejunal mucosaUBERON:000039998.97gold quality
ileal mucosaUBERON:000033198.67gold quality
endothelial cellCL:000011595.45gold quality
mucosa of transverse colonUBERON:000499194.43gold quality
seminal vesicleUBERON:000099894.20gold quality
duodenumUBERON:000211493.87gold quality
substantia nigraUBERON:000203887.82gold quality
medial globus pallidusUBERON:000247787.80gold quality
colonic mucosaUBERON:000031787.50gold quality
placentaUBERON:000198787.32gold quality
midbrainUBERON:000189187.31gold quality
C1 segment of cervical spinal cordUBERON:000646987.00gold quality
inferior vagus X ganglionUBERON:000536386.89gold quality
subthalamic nucleusUBERON:000190686.88gold quality
spinal cordUBERON:000224085.98gold quality
globus pallidusUBERON:000187585.81gold quality
dorsal motor nucleus of vagus nerveUBERON:000287085.53gold quality
postcentral gyrusUBERON:000258185.52gold quality
putamenUBERON:000187485.06gold quality
rectumUBERON:000105285.03gold quality
caudate nucleusUBERON:000187385.00gold quality
prefrontal cortexUBERON:000045184.87gold quality
lateral nuclear group of thalamusUBERON:000273684.87gold quality
Ammon’s hornUBERON:000195484.66gold quality
hypothalamusUBERON:000189884.63gold quality
mucosa of sigmoid colonUBERON:000499384.53gold quality
medulla oblongataUBERON:000189683.88gold quality
parietal lobeUBERON:000187283.83gold quality
amygdalaUBERON:000187683.69gold quality
superior vestibular nucleusUBERON:000722783.32gold quality

Single-cell (SCXA)

Detected in 8 experiment(s), a significant marker in 7.

ExperimentMarker?Max mean expression
E-MTAB-6819yes387.44
E-MTAB-10018yes209.80
E-MTAB-6701yes45.98
E-GEOD-135922yes45.47
E-MTAB-9388yes7.38
E-GEOD-137537yes6.21
E-MTAB-2983no495.00
E-ANND-3no0.00

Regulation

Is transcription factor: no

Upstream regulators (CollecTRI, top): AHR, E2F1, ESR1, ESR2, FOXC1, GLI1, HIF1A, KLF5, MSX2, NFE2L2, NFKB1, NFKB, NR1I2, NR3C1, PGR, PPARA, PPARG, RARA, RELA, SALL4, SMAD2, SMARCA4, SP1, SP3, TP53

miRNA regulators (miRDB)

104 targeting ABCG2, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):

miRNAMax scoreAvg scoremiRNA target_count
HSA-MIR-6873-3P100.0071.422626
HSA-MIR-6833-3P100.0070.633197
HSA-MIR-3163100.0077.238605
HSA-MIR-4768-5P100.0069.492861
HSA-MIR-5011-5P100.0083.465820
HSA-MIR-4747-5P100.0067.902681
HSA-MIR-5196-5P100.0067.982761
HSA-MIR-196A-1-3P99.9972.152772
HSA-MIR-186-5P99.9970.833707
HSA-MIR-1213699.9872.815713
HSA-MIR-569699.9872.364487
HSA-MIR-548N99.9871.944170
HSA-MIR-4482-3P99.9872.503147
HSA-MIR-512-3P99.9767.351049
HSA-MIR-302E99.9670.742669
HSA-MIR-570-3P99.9672.414910
HSA-MIR-548AT-5P99.9670.832666
HSA-MIR-314399.9371.963104
HSA-MIR-218-5P99.9372.222103
HSA-MIR-311999.9271.342390
HSA-MIR-3529-3P99.9073.553045
HSA-MIR-302A-3P99.8971.231777
HSA-MIR-302B-3P99.8971.231777
HSA-MIR-302C-3P99.8971.201778
HSA-MIR-302D-3P99.8971.251777
HSA-MIR-7845-5P99.8864.88771
HSA-MIR-1211999.8768.351653
HSA-MIR-579-3P99.8671.663628
HSA-MIR-520E-3P99.8470.551698
HSA-MIR-373-3P99.8470.681668

Literature-anchored findings (GeneRIF, showing 40)

  • role in transport of 7-ethyl-10-hydroxycamptothecin (SN-38) in human lung cancer cells (PMID:11688982)
  • ABCG2 protein effluxes hoechst 33342 in hematopoietic stem cells (PMID:11801536)
  • homodimer formation is essential for BCRP drug resistance (PMID:11807788)
  • There is no indication that elevated BCRP expression in breast carcinomas confers resistance to anthracyclines. (PMID:11948115)
  • Increased expression in relapsed or refractory acute myeloid leukemia compared to level at diagnosis. (PMID:11986944)
  • Expression of the BCRP gene reduces the response to chemotherapy in AML and that BCRP expression is higher at the time of relapse. (PMID:12145683)
  • Overexpression of wild-type breast cancer resistance protein mediates methotrexate resistance. (PMID:12208758)
  • involvement of ABCG2 in multidrug resistance in cancer, especially with regard to acute myeloid leukemia (PMID:12369998)
  • characterization of different isoforms without possible endogenous dimerization partners (PMID:12374800)
  • ABCG2 expression conferred resistance to mitoxantrone & topotecan, but not to idarubicin. High levels of ABCG2 mRNA expression in adult AML blast specimens are relatively uncommon. ABCG2 expression may be limited to a small cell subpopulation. (PMID:12393637)
  • The breast cancer resistance protein protects against pheophorbide a, a major chlorophyll-derived dietary phototoxin, and protoporphyria. (PMID:12429862)
  • In both normal and tumour brain tissue, BCRP is located at the blood-brain barrier, mainly at the luminal surface of microvessel endothelium. It may pose an additional barrier to drug access to the brain. (PMID:12438926)
  • results showed that ABCG2 confers resistance to indolocarbazoles by transporting them in an energy-dependent manner (PMID:12459192)
  • polymorphisms in BCRP1 result in low amounts of BCRP, which results in hypersensitivity of normal cells to such anticancer drugs as irinotecan and mitoxantrone (PMID:12479221)
  • RNA expression of this protein in breast cancer correlates with response to chemotherapy. (PMID:12576456)
  • Function of the ABC transporters, P-gp, multidrug resistance protein and BCRP, in minimal residual disease in acute myeloid leukemia (PMID:12604403)
  • BCRP may play a role in the transport of sterols in human, in addition to its ability to transport multiple drugs and toxins. (PMID:12668685)
  • transports sulfated conjugates of steroids and xenobiotics (PMID:12682043)
  • functional study on polymorphism and determination of critical role of arginine-482 in methotrexate transport (PMID:12741957)
  • Wld-type as well as R482T BCRP mediates cellular efflux of 9-AC but not 9-NC. Zplar groups at the 9 or 10 position of the CPT A ring facilitate interaction with BCRP. (PMID:12810652)
  • ABCG2 is a component of the energy-dependent efflux system for certain folates and antifolates. (PMID:12874005)
  • ABCG2 is expressed and functions as a transporter in the brain. (PMID:12958161)
  • Single amino acid substitutions in the transmembrane domains of breast cancer resistance protein (BCRP) alter cross resistance patterns in transfectants (PMID:14566825)
  • REVIEW: multidrug resistance in breast cancer (PMID:14576842)
  • Higher ABCG2 expression is associated with T-lineage acute lymphoblastic leukemia (PMID:14613996)
  • human ABCG2 likely exists and functions as a homotetramer (PMID:15001581)
  • BCRP may serve as a molecular target for reducing drug resistance to chemotherapy in advanced lung cancer patients. (PMID:15014021)
  • VX-710 modulates Pgp, MRP-1, and BCRP(R482), and has potential as a clinical broad-spectrum multidrug resistance modulator in malignancies. (PMID:15014037)
  • ABCG2 overexpression is associated with drug resistance to SN38 in colon cancer cells and in irinotecan-treated metastases (PMID:15027118)
  • Bcrp/ABCG2 enhances hypoxic cell survival through interactions with heme (PMID:15044468)
  • subcellular localization of ABCG2 in gallbladder adenocarcinoma (PMID:15146167)
  • As a method of circumventing ABCG2-associated drug resistance, low-polarity camptothecin analogues are considered to be potent lead compounds. (PMID:15170677)
  • BCRP mRNA levels, antibody staining and function correlated strongly in cell lines but not in acute myeloid leukemia samples, suggesting complex biology of BCRP in AML and incomplete modeling by cell lines (PMID:15208643)
  • imatinib is a substrate for BCRP; it competes with mitoxantrone for drug export (PMID:15251980)
  • GXXXG motif promotes proper packing of the transmembrane segments in the functional ABCG2 homodimer, although it does not solely arbitrate dimerization (PMID:15260487)
  • Results suggest that 1) the predominant allelic expression pattern of BCRP in placental samples is biallelic, and 2) the mutation C421A is not a genetic variant acting in cis, but is considered to influence translation efficiency. (PMID:15475413)
  • conformational changes of the ABCG2 multidrug transporter modify its interaction with a monoclonal antibody on the cell surface (PMID:15557326)
  • Cyclosporin A is neither a substrate nor an inhibitor of the human ABCG2 transporter. (PMID:15598974)
  • The breast cancer resistance protein (BCRP) can be expressed in AML and BCRP mRNA expression was determined in samples from 40 AML patients by real-time RT-PCR. (PMID:15607361)
  • The ABCG2, a member of the ATP binding cassette (ABC) transporters, has been identified as a molecular determinant for bone marrow stem cells and proposed as a universal marker for stem cells. (PMID:15625123)

Cross-species orthologs

12 orthologs

OrganismSymbolGene ID
danio_rerioabcg2bENSDARG00000079361
mus_musculusAbcg3ENSMUSG00000029299
rattus_norvegicusAbcg3l4ENSRNOG00000064381
rattus_norvegicusAbcg3l4ENSRNOG00000065003
rattus_norvegicusAbcg3l1ENSRNOG00000069481
rattus_norvegicusAbcg3ENSRNOG00000070774
drosophila_melanogasterCG31689FBGN0031449
drosophila_melanogasterCG31121FBGN0051121
drosophila_melanogasterCG32091FBGN0052091
caenorhabditis_elegansWBGENE00006522
caenorhabditis_elegansWBGENE00015479
caenorhabditis_elegansWBGENE00017179

Paralogs (4): ABCG5 (ENSG00000138075), ABCG8 (ENSG00000143921), ABCG1 (ENSG00000160179), ABCG4 (ENSG00000172350)

Protein

Protein identifiers

Broad substrate specificity ATP-binding cassette transporter ABCG2Q9UNQ0 (reviewed: Q9UNQ0)

Alternative names: ATP-binding cassette sub-family G member 2, Breast cancer resistance protein, CDw338, Mitoxantrone resistance-associated protein, Placenta-specific ATP-binding cassette transporter, Urate exporter

All UniProt accessions (2): Q9UNQ0, F8S0F2

UniProt curated annotations — full annotation on UniProt →

Function. Broad substrate specificity ATP-dependent transporter of the ATP-binding cassette (ABC) family that actively extrudes a wide variety of physiological compounds, dietary toxins and xenobiotics from cells. Involved in porphyrin homeostasis, mediating the export of protoporphyrin IX (PPIX) from both mitochondria to cytosol and cytosol to extracellular space, it also functions in the cellular export of heme. Also mediates the efflux of sphingosine-1-P from cells. Acts as a urate exporter functioning in both renal and extrarenal urate excretion. In kidney, it also functions as a physiological exporter of the uremic toxin indoxyl sulfate. Also involved in the excretion of steroids like estrone 3-sulfate/E1S, 3beta-sulfooxy-androst-5-en-17-one/DHEAS, and other sulfate conjugates. Mediates the secretion of the vitamins riboflavin and biotin into milk. Involved in the excretion of the riboflavin-derived compound lumichrome into the intestinal lumen and in its secretion into milk. Extrudes pheophorbide a, a phototoxic porphyrin catabolite of chlorophyll, reducing its bioavailability. Plays an important role in the exclusion of xenobiotics from the brain. It confers to cells a resistance to multiple drugs and other xenobiotics including mitoxantrone, pheophorbide, camptothecin, methotrexate, azidothymidine, and the anthracyclines daunorubicin and doxorubicin, through the control of their efflux. In placenta, it limits the penetration of drugs from the maternal plasma into the fetus. May play a role in early stem cell self-renewal by blocking differentiation. In inflammatory macrophages, exports itaconate from the cytosol to the extracellular compartment and limits the activation of TFEB-dependent lysosome biogenesis involved in antibacterial innate immune response.

Subunit / interactions. Homodimer; disulfide-linked. The minimal functional unit is a homodimer, but the major oligomeric form in plasma membrane is a homotetramer with possibility of higher order oligomerization up to homododecamers.

Subcellular location. Cell membrane. Apical cell membrane. Mitochondrion membrane.

Tissue specificity. Highly expressed in placenta. Low expression in small intestine, liver and colon. Expressed in brain (at protein level).

Post-translational modifications. N-glycosylated. Glycosylation-deficient ABCG2 is normally expressed and functional. Phosphorylated. Phosphorylation at Thr-362 by PIM1 is induced by drugs like mitoxantrone and is associated with cells increased drug resistance. It regulates the localization to the plasma membrane, the homooligomerization and therefore, the activity of the transporter.

Activity regulation. Specifically inhibited by the fungal toxin fumitremorgin C and Ko143.

Domain organisation. The extracellular loop 3 (ECL3) is involved in binding porphyrins and transfer them to other carriers, probably albumin.

Polymorphism. Genetic variations in ABCG2 define the blood group Junior system (JR) [MIM:614490]. Individuals with Jr(a-) blood group lack the Jr(a) antigen on their red blood cells. These individuals may have anti-Jr(a) antibodies in their serum, which can cause transfusion reactions or hemolytic disease of the fetus or newborn. Although the clinical significance of the Jr(a-) blood group has been controversial, severe fatal hemolytic disease of the newborn has been reported. The Jr(a-) phenotype has a higher frequency in individuals of Asian descent, compared to those of European descent. The Jr(a-) phenotype is inherited as an autosomal recessive trait. Genetic variations in ABCG2 influence the variance in serum uric acid concentrations and define the serum uric acid concentration quantitative trait locus 1 (UAQTL1) [MIM:138900]. Excess serum accumulation of uric acid can lead to the development of gout, a common disorder characterized by tissue deposition of monosodium urate crystals as a consequence of hyperuricemia.

Similarity. Belongs to the ABC transporter superfamily. ABCG family. Eye pigment precursor importer (TC 3.A.1.204) subfamily.

Isoforms (2)

UniProt IDNamesCanonical?
Q9UNQ0-11yes
Q9UNQ0-22

RefSeq proteins (7): NP_001244315, NP_001335914, NP_001335915, NP_001335916, NP_001335917, NP_001335918, NP_004818* (*=MANE)

Domains & families (InterPro)

IDNameType
IPR003439ABC_transporter-like_ATP-bdDomain
IPR003593AAA+_ATPaseDomain
IPR013525ABC2_TMDomain
IPR027417P-loop_NTPaseHomologous_superfamily
IPR043926ABCG_domDomain
IPR050352ABCG_transportersFamily

Pfam: PF00005, PF01061, PF19055

Enzyme classification (BRENDA):

  • EC 7.6.2.2 — ABC-type xenobiotic transporter (BRENDA: 49 organisms, 716 substrates, 471 inhibitors, 280 Km, 31 kcat entries)
  • EC 7.6.2.3 — ABC-type glutathione-S-conjugate transporter (BRENDA: 8 organisms, 145 substrates, 63 inhibitors, 16 Km, 0 kcat entries)

Substrate kinetics (BRENDA)

75 substrates with measured Km, best-characterized 15. Km ranges are aggregated across organisms/conditions.

SubstrateKm (mM)Measurements
ATP0.0009–9105
VERAPAMIL/IN0.0006–0.005811
VINBLASTINE/IN0.0002–0.145511
ESTRADIOL 17-BETA-D-GLUCURONIDE/IN0.013–0.177
LEUKOTRIENE C4/IN7
METHOTREXATE/IN0.24–0.7766
NICARDIPINE/IN0.0004–0.00266
PROGESTERONE/IN0.0038–0.02076
CYCLIC GUANOSINE MONOPHOSPHATE/IN0.36–25
VERAPAMIL0.0022–0.01155
ATP0.0865–0.915
COLCHICINE/IN0.037–0.724
FOLIC ACID/IN0.13–0.264
PACLITAXEL/IN0.0007–0.00094
RHODAMINE 123/IN0.0118–0.03544

Catalyzed reactions (Rhea), 12 shown:

  • urate(in) + ATP + H2O = urate(out) + ADP + phosphate + H(+) (RHEA:16461)
  • sphing-4-enine 1-phosphate(in) + ATP + H2O = sphing-4-enine 1-phosphate(out) + ADP + phosphate + H(+) (RHEA:38951)
  • 17beta-estradiol 17-O-(beta-D-glucuronate)(in) + ATP + H2O = 17beta-estradiol 17-O-(beta-D-glucuronate)(out) + ADP + phosphate + H(+) (RHEA:60128)
  • indoxyl sulfate(in) + ATP + H2O = indoxyl sulfate(out) + ADP + phosphate + H(+) (RHEA:61332)
  • estrone 3-sulfate(in) + ATP + H2O = estrone 3-sulfate(out) + ADP + phosphate + H(+) (RHEA:61348)
  • riboflavin(in) + ATP + H2O = riboflavin(out) + ADP + phosphate + H(+) (RHEA:61352)
  • methotrexate(in) + ATP + H2O = methotrexate(out) + ADP + phosphate + H(+) (RHEA:61356)
  • pheophorbide a(in) + ATP + H2O = pheophorbide a(out) + ADP + phosphate + H(+) (RHEA:61360)
  • dehydroepiandrosterone 3-sulfate(in) + ATP + H2O = dehydroepiandrosterone 3-sulfate(out) + ADP + phosphate + H(+) (RHEA:61364)
  • 4-methylumbelliferone sulfate(in) + ATP + H2O = 4-methylumbelliferone sulfate(out) + ADP + phosphate + H(+) (RHEA:61368)
  • 4-methylumbelliferone beta-D-glucuronate(in) + ATP + H2O = 4-methylumbelliferone beta-D-glucuronate(out) + ADP + phosphate + H(+) (RHEA:61372)
  • 5,7-dimethyl-2-methylamino-4-(3-pyridylmethyl)-1,3-benzothiazol-6-yl sulfate(in) + ATP + H2O = 5,7-dimethyl-2-methylamino-4-(3-pyridylmethyl)-1,3-benzothiazol-6-yl sulfate(out) + ADP + phosphate + H(+) (RHEA:61376)

UniProt features (139 total): helix 31, sequence variant 26, mutagenesis site 25, strand 17, topological domain 7, sequence conflict 7, transmembrane region 6, turn 5, binding site 4, domain 2, site 2, disulfide bond 2, splice variant 2, chain 1, modified residue 1, glycosylation site 1

Structure

Experimental structures (PDB)

29 structures.

PDBMethodResolution (Å)
8QCMELECTRON MICROSCOPY2.39
8U2CELECTRON MICROSCOPY2.5
8Q7BELECTRON MICROSCOPY2.56
8PXOELECTRON MICROSCOPY3
8PY4ELECTRON MICROSCOPY3
8P7WELECTRON MICROSCOPY3.04
6HBUELECTRON MICROSCOPY3.09
6HZMELECTRON MICROSCOPY3.09
6ETIELECTRON MICROSCOPY3.1
7OJHELECTRON MICROSCOPY3.1
8BHTELECTRON MICROSCOPY3.1
7NEQELECTRON MICROSCOPY3.12
8BI0ELECTRON MICROSCOPY3.2
8P8AELECTRON MICROSCOPY3.2
7NEZELECTRON MICROSCOPY3.39
7OJ8ELECTRON MICROSCOPY3.4
7OJIELECTRON MICROSCOPY3.4
8P8JELECTRON MICROSCOPY3.49
6VXFELECTRON MICROSCOPY3.5
7NFDELECTRON MICROSCOPY3.51
6FFCELECTRON MICROSCOPY3.56
6HIJELECTRON MICROSCOPY3.56
6HCOELECTRON MICROSCOPY3.58
6FEQELECTRON MICROSCOPY3.6
6VXIELECTRON MICROSCOPY3.7
5NJ3ELECTRON MICROSCOPY3.78
5NJGELECTRON MICROSCOPY3.78
6VXHELECTRON MICROSCOPY4
6VXJELECTRON MICROSCOPY4.1

Predicted structure (AlphaFold)

ModelpLDDTFraction very-high
AF-Q9UNQ0-F185.540.66

Antibody-complex structures (SAbDab): 165NJ3, 5NJG, 6ETI, 6FEQ, 6HCO, 7NEQ, 7NEZ, 7NFD, 8P7W, 8P8A, 8P8J, 8PXO, 8PY4, 8Q7B, 8QCM, 8U2C

Functional residue map

Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.

Catalytic / active sites (2): 418 (not glycosylated); 557 (not glycosylated)

Ligand- & substrate-binding residues (4): 80–87; 184–190; 211; 243

Post-translational modifications (1): 362

Disulfide bonds (2): 592–608, 603

Glycosylation sites (1): 596

Mutagenesis-validated functional residues (25):

PositionPhenotype
71decreased protein abundance. no effect on substrate transmembrane transport.
86decreased protein abundance. decreased localization to the plasma membrane and retained intracellularly. loss of atpase-
211decreased estrone-3 sulfate atpase-coupled transmembrane transporter activity. decreased substrate-induced atp hydrolysi
362loss of phosphorylation by pim1. decreased localization to the plasma membrane. decreased homooligomerization. loss of f
362loss of phosphorylation by pim1. constitutive drug resistance independent of pim1.
383loss of protein expression.
418no effect.
435no effect on stability. increased estrone-3 sulfate atpase-coupled transmembrane transporter activity. increased substra
435no effect on stability. decreased estrone-3 sulfate atpase-coupled transmembrane transporter activity. decreased substra
436no effect on stability. decreased estrone-3 sulfate atpase-coupled transmembrane transporter activity. decreased substra
439no effect on stability. decreased estrone-3 sulfate atpase-coupled transmembrane transporter activity. decreased substra
482decreases atpase activity.
482increases atpase activity.
482no change in atpase activity.
482decreases transport activity.
546no effect on stability. no effect on estrone-3 sulfate atpase-coupled transmembrane transporter activity. no effect on s
546no effect on stability. decreased estrone-3 sulfate atpase-coupled transmembrane transporter activity. increased basal a
549no effect on stability. no effect on estrone-3 sulfate atpase-coupled transmembrane transporter activity. no effect on s
554no effect on stability. increased estrone-3 sulfate atpase-coupled transmembrane transporter activity. increased basal a
555loss of protein expression.
557no effect.
583strongly reduced binding to hemin but not to ppix.
596loss of glycosylation.
603strongly reduced binding to hemin but not to ppix.
605no effect on hemin binding.

Function

Pathways and Gene Ontology

Reactome pathways

23 pathways

IDPathway
R-HSA-1660661Sphingolipid de novo biosynthesis
R-HSA-189451Heme biosynthesis
R-HSA-189483Heme degradation
R-HSA-2161517Abacavir transmembrane transport
R-HSA-917937Iron uptake and transport
R-HSA-9725554Differentiation of Keratinocytes in Interfollicular Epidermis in Mammalian Skin
R-HSA-9753281Paracetamol ADME
R-HSA-9793528Ciprofloxacin ADME
R-HSA-9818032NFE2L2 regulating MDR associated enzymes
R-HSA-1266738Developmental Biology
R-HSA-1430728Metabolism
R-HSA-189445Metabolism of porphyrins
R-HSA-2161522Abacavir ADME
R-HSA-2262752Cellular responses to stress
R-HSA-382551Transport of small molecules
R-HSA-428157Sphingolipid metabolism
R-HSA-556833Metabolism of lipids
R-HSA-8953897Cellular responses to stimuli
R-HSA-9711123Cellular response to chemical stress
R-HSA-9734767Developmental Cell Lineages
R-HSA-9748784Drug ADME
R-HSA-9755511KEAP1-NFE2L2 pathway
R-HSA-9759194Nuclear events mediated by NFE2L2

MSigDB gene sets: 315 (showing top): GSE18804_SPLEEN_MACROPHAGE_VS_TUMORAL_MACROPHAGE_UP, GOBP_EXCRETION, GOBP_CIRCULATORY_SYSTEM_PROCESS, PAL_PRMT5_TARGETS_UP, REACTOME_METABOLISM_OF_PORPHYRINS, VICENT_METASTASIS_UP, GOCC_CELL_SURFACE, GOBP_ORGANIC_ACID_TRANSPORT, KEGG_ABC_TRANSPORTERS, BOYAULT_LIVER_CANCER_SUBCLASS_G12_DN, OSWALD_HEMATOPOIETIC_STEM_CELL_IN_COLLAGEN_GEL_UP, GOBP_CELLULAR_RESPONSE_TO_TOXIC_SUBSTANCE, GOBP_SPHINGOLIPID_METABOLIC_PROCESS, BILD_E2F3_ONCOGENIC_SIGNATURE, ENGELMANN_CANCER_PROGENITORS_UP

GO Biological Process (14): obsolete organic anion transport (GO:0015711), biotin transport (GO:0015878), sphingolipid biosynthetic process (GO:0030148), riboflavin transport (GO:0032218), urate metabolic process (GO:0046415), transmembrane transport (GO:0055085), transepithelial transport (GO:0070633), renal urate salt excretion (GO:0097744), export across plasma membrane (GO:0140115), transport across blood-brain barrier (GO:0150104), cellular detoxification (GO:1990748), xenobiotic transport across blood-brain barrier (GO:1990962), lipid transport (GO:0006869), urate transport (GO:0015747)

GO Molecular Function (17): ATP binding (GO:0005524), obsolete organic anion transmembrane transporter activity (GO:0008514), ABC-type xenobiotic transporter activity (GO:0008559), urate transmembrane transporter activity (GO:0015143), biotin transmembrane transporter activity (GO:0015225), efflux transmembrane transporter activity (GO:0015562), ATP hydrolysis activity (GO:0016887), riboflavin transmembrane transporter activity (GO:0032217), ATPase-coupled transmembrane transporter activity (GO:0042626), identical protein binding (GO:0042802), protein homodimerization activity (GO:0042803), xenobiotic transmembrane transporter activity (GO:0042910), sphingolipid intramembrane carrier activity (GO:0046624), nucleotide binding (GO:0000166), protein binding (GO:0005515), protein dimerization activity (GO:0046983), ABC-type transporter activity (GO:0140359)

GO Cellular Component (9): nucleoplasm (GO:0005654), plasma membrane (GO:0005886), apical plasma membrane (GO:0016324), brush border membrane (GO:0031526), mitochondrial membrane (GO:0031966), membrane raft (GO:0045121), external side of apical plasma membrane (GO:0098591), mitochondrion (GO:0005739), membrane (GO:0016020)

Reactome top-level categories

Rollup of top-12 pathways:

CategoryPathways
Drug ADME3
Metabolism of porphyrins2
Metabolism2
Sphingolipid metabolism1
Abacavir ADME1
Transport of small molecules1
Developmental Cell Lineages of the Integumentary System1
Nuclear events mediated by NFE2L21
Cellular responses to stimuli1
Metabolism of lipids1
Cellular responses to stress1
Developmental Biology1

GO top-level categories

Rollup of top GO terms by namespace:

CategoryTerms
nitrogen compound transport3
transport3
vitamin transport2
cellular process2
xenobiotic transport2
vitamin transmembrane transporter activity2
transmembrane transporter activity2
ATP-dependent activity2
protein binding2
cellular anatomical structure2
apical plasma membrane2
monocarboxylic acid transport1
sulfur compound transport1
sphingolipid metabolic process1
lipid biosynthetic process1
small molecule metabolic process1
purine-containing compound metabolic process1
renal tubular secretion1
transmembrane transport1
export from cell1
vascular transport1
cellular response to toxic substance1
detoxification1
transport across blood-brain barrier1
lipid localization1
adenyl ribonucleotide binding1
purine ribonucleoside triphosphate binding1
xenobiotic transmembrane transporter activity1
ABC-type transporter activity1
urate transport1
salt transmembrane transporter activity1
monocarboxylic acid transmembrane transporter activity1
biotin transport1
sulfur compound transmembrane transporter activity1
ribonucleoside triphosphate phosphatase activity1
riboflavin transport1
primary active transmembrane transporter activity1
ATP hydrolysis activity1
identical protein binding1
protein dimerization activity1

Protein interactions and networks

STRING

3633 interactions, top by confidence (×1000):

Protein AProtein BPartner UniProtScore
ABCG2ABCC1P33527969
ABCG2ABCC2Q92887889
ABCG2SLCO1B1Q9Y6L6886
ABCG2SLC2A9Q9NRM0874
ABCG2SLC22A12Q96S37861
ABCG2BSGP35613839
ABCG2MRPS7Q9Y2R9813
ABCG2ALBP02768806
ABCG2SLC17A1Q14916803
ABCG2SLC22A1O15245798
ABCG2SLC22A8Q8TCC7796
ABCG2SLCO1B3Q9NPD5790
ABCG2PROM1O43490783
ABCG2CYP3A4P05184778
ABCG2SLCO2B1O94956767

IntAct

29 interactions, top by confidence:

ABTypeScore
ABCG2ABCG2psi-mi:“MI:0915”(physical association)0.790
ABCG2ABCG2psi-mi:“MI:0407”(direct interaction)0.790
ABCG2PIM1psi-mi:“MI:0915”(physical association)0.640
PIM1ABCG2psi-mi:“MI:0915”(physical association)0.640
PIM1ABCG2psi-mi:“MI:0403”(colocalization)0.640
ABCG2ENPP1psi-mi:“MI:0407”(direct interaction)0.600
ENPP1ABCG2psi-mi:“MI:0915”(physical association)0.600
ABCG2ENPP1psi-mi:“MI:0915”(physical association)0.600
Trim69psi-mi:“MI:0915”(physical association)0.400
GPC1SNAP23psi-mi:“MI:0915”(physical association)0.400
GPC1GANABpsi-mi:“MI:0915”(physical association)0.400
ABCG2UBCpsi-mi:“MI:0915”(physical association)0.400
UBCABCG2psi-mi:“MI:0915”(physical association)0.400
Npc1ESYT2psi-mi:“MI:0914”(association)0.350
ARRDC5PLPP1psi-mi:“MI:0914”(association)0.350
ABCG2SCAMP1psi-mi:“MI:0914”(association)0.350
RHCGTMEM223psi-mi:“MI:0914”(association)0.350
SLC34A2SNAP23psi-mi:“MI:0914”(association)0.350
SLC6A7ABCB1psi-mi:“MI:0914”(association)0.350
SLC7A2SCAMP3psi-mi:“MI:0914”(association)0.350
SLC7A4ESYT2psi-mi:“MI:0914”(association)0.350

BioGRID (81): ABCG2 (Affinity Capture-MS), ABCG2 (Affinity Capture-MS), ABCG2 (Affinity Capture-MS), ABCG2 (Affinity Capture-MS), ABCG2 (Affinity Capture-MS), ABCG2 (Affinity Capture-MS), ABCG2 (Affinity Capture-MS), ABCG2 (Affinity Capture-MS), ABCG2 (Affinity Capture-MS), ABCG2 (Affinity Capture-MS), ABCG2 (Affinity Capture-MS), ABCG2 (Affinity Capture-MS), ABCG2 (Affinity Capture-MS), ABCG2 (Affinity Capture-MS), ABCG2 (Affinity Capture-MS)

ESM2 similar proteins: A2AKQ0, A2VE55, A5GFZ5, C9WPN6, F1QGW6, F6RQL9, O60762, O70152, O77676, P00516, P0C605, P20461, P32189, P35250, P37273, P41091, P53033, P81795, Q05B83, Q0IID9, Q13126, Q13976, Q14409, Q15B89, Q1JQ93, Q2KHU8, Q2KJ61, Q2TBV5, Q2VIR3, Q3MHF7, Q5HZM6, Q5MB13, Q5R797, Q5RDC9, Q5RIC0, Q5ZHS1, Q5ZMS3, Q63060, Q641W4, Q64516

Diamond homologs: A0A059J0G5, A0A0M3R8G1, A0A0M4FLW6, A0A1U8QKX8, A2WSH0, A9YWR6, B8ALI0, B9G300, B9G5Y5, C7J6G6, D3GE74, D3ZCM3, F2PLH2, F2RSQ6, F2SHL1, H9BZ66, O24367, O80946, O81016, P10090, P25371, P45843, P45844, P58428, Q05360, Q08234, Q0JLC5, Q16928, Q17320, Q27256, Q2QV81, Q4GZT4, Q4WFQ4, Q54CG0, Q55DA0, Q55DR1, Q55DW4, Q55GB1, Q5MB13, Q64343

SIGNOR signaling

4 interactions.

AEffectBMechanism
PPARG“up-regulates quantity by expression”ABCG2“transcriptional regulation”
SALL4“up-regulates quantity by expression”ABCG2“transcriptional regulation”
SMARCA4“up-regulates quantity by expression”ABCG2“transcriptional regulation”
PIM1“up-regulates activity”ABCG2phosphorylation

Disease & clinical

Cancer significance

Clinical variants and AI predictions

ClinVar

97 variants total. Per-class counts are floors (≥ shown; pagination cap):

ClassificationCount (floor)
Pathogenic14
Likely pathogenic1
Uncertain significance46
Likely benign5
Benign8

Top pathogenic / likely-pathogenic (15)

Variant IDHGVSClassification
1341211GRCh37/hg19 4q21.21-22.1(chr4:80467886-93362064)x1Pathogenic
145649GRCh38/hg38 4q21.21-22.3(chr4:80879777-94809447)x1Pathogenic
148194GRCh38/hg38 4q21.21-24(chr4:80427023-100855441)x1Pathogenic
1527097GRCh37/hg19 4q13.3-22.1(chr4:75737340-91131156)Pathogenic
1527100GRCh37/hg19 4q21.21-22.2(chr4:79780152-94873225)Pathogenic
1527103GRCh37/hg19 4q21.21-22.1(chr4:81054789-90667421)Pathogenic
1527108GRCh37/hg19 4q21.23-22.1(chr4:85839771-93071150)Pathogenic
152923GRCh38/hg38 4q21.23-22.2(chr4:85449365-93973194)x1Pathogenic
2498966GRCh37/hg19 4q22.1(chr4:88344058-89061168)x1Pathogenic
2579270GRCh38/hg38 4q21.21-23(chr4:79123548-99457773)x1Pathogenic
3062764GRCh37/hg19 4q21.21-22.3(chr4:81558759-95965995)x1Pathogenic
394976GRCh37/hg19 4q21.21-22.1(chr4:82283358-90341831)x1Pathogenic
562937GRCh37/hg19 4q21.21-22.3(chr4:81314915-96636651)x1Pathogenic
59455GRCh38/hg38 4q21.21-22.1(chr4:79575748-92412449)x1Pathogenic
3062760GRCh37/hg19 4q21.23-22.3(chr4:85139670-96295033)x3Likely pathogenic

SpliceAI

2331 predictions. Top by Δscore:

VariantEffectΔscore
4:88094575:A:ACdonor_gain1.0000
4:88094576:C:CCdonor_gain1.0000
4:88094576:CG:Cdonor_gain1.0000
4:88094576:CGTTG:Cdonor_gain1.0000
4:88094658:GCCTA:Gacceptor_loss1.0000
4:88094659:CCTA:Cacceptor_loss1.0000
4:88094660:C:CCacceptor_gain1.0000
4:88094660:CT:Cacceptor_loss1.0000
4:88094661:T:Gacceptor_loss1.0000
4:88095605:AAAAT:Aacceptor_gain1.0000
4:88095606:AAAT:Aacceptor_gain1.0000
4:88095607:AAT:Aacceptor_gain1.0000
4:88095608:AT:Aacceptor_gain1.0000
4:88095610:C:CAacceptor_loss1.0000
4:88097615:A:Tacceptor_gain1.0000
4:88107283:A:ACacceptor_gain1.0000
4:88107283:A:Cacceptor_gain1.0000
4:88113353:TGGAA:Tdonor_gain1.0000
4:88113363:T:Cdonor_gain1.0000
4:88113556:T:TCacceptor_gain1.0000
4:88113563:C:CTacceptor_gain1.0000
4:88113564:A:Tacceptor_gain1.0000
4:88113565:G:GCacceptor_gain1.0000
4:88113569:A:ACacceptor_gain1.0000
4:88113569:A:Cacceptor_gain1.0000
4:88114952:TATAC:Tdonor_loss1.0000
4:88114954:TA:Tdonor_loss1.0000
4:88114955:A:Tdonor_loss1.0000
4:88114956:C:CGdonor_loss1.0000
4:88131795:ATACT:Adonor_loss1.0000

AlphaMissense

4276 scored. Top likely-pathogenic:

VariantProtein changeam_pathogenicity
4:88118223:G:CH243D1.000
4:88118216:G:TP245H0.999
4:88121663:C:GA221P0.999
4:88121673:G:CD217E0.999
4:88121673:G:TD217E0.999
4:88121674:T:AD217V0.999
4:88121674:T:CD217G0.999
4:88121675:C:GD217H0.999
4:88121689:G:TP212H0.999
4:88121692:T:AE211V0.999
4:88132582:T:AK86I0.999
4:88095541:G:CS572R0.998
4:88095541:G:TS572R0.998
4:88095543:T:GS572R0.998
4:88121674:T:GD217A0.998
4:88121675:C:TD217N0.998
4:88121677:A:GL216S0.998
4:88121689:G:CP212R0.998
4:88121691:C:AE211D0.998
4:88121691:C:GE211D0.998
4:88121692:T:CE211G0.998
4:88121692:T:GE211A0.998
4:88121693:C:TE211K0.998
4:88121695:T:AD210V0.998
4:88121748:T:AK192N0.998
4:88121748:T:GK192N0.998
4:88131083:A:GL170P0.998
4:88131803:T:AQ126H0.998
4:88131803:T:GQ126H0.998
4:88132583:T:GK86Q0.998

dbSNP variants (sampled 300 via entrez): RS1000002258 (4:88094347 G>A), RS1000039382 (4:88207764 C>T), RS1000089015 (4:88222936 G>A,C), RS1000106772 (4:88161991 T>A), RS1000117689 (4:88092723 C>T), RS1000121656 (4:88223327 C>T), RS1000176118 (4:88204945 T>A), RS10001782 (4:88136188 T>C,G), RS1000204267 (4:88156050 C>G), RS1000205232 (4:88126323 T>A,C), RS1000239974 (4:88168209 C>A), RS1000255944 (4:88112437 T>A), RS1000261345 (4:88173566 C>A,T), RS1000266205 (4:88216810 A>G), RS1000275640 (4:88112151 T>G)

Disease associations

OMIM: gene MIM:603756 | disease phenotypes: MIM:613509

GenCC curated gene-disease

Mondo (3): chromosome 4q21 deletion syndrome (MONDO:0013292), autosomal dominant polycystic kidney disease (MONDO:0004691), hereditary breast ovarian cancer syndrome (MONDO:0003582)

Orphanet (3): 4q21 microdeletion syndrome (Orphanet:238750), Autosomal dominant polycystic kidney disease (Orphanet:730), Hereditary breast and/or ovarian cancer syndrome (Orphanet:145)

HPO phenotypes

5 total (5 of 5 shown, HPO-id order):

HPOTerm
HP:0000006Autosomal dominant inheritance
HP:0000951Abnormality of the skin
HP:0001369Arthritis
HP:0002149Hyperuricemia
HP:0033073Urate tophus

GWAS associations

96 associations (top):

StudyTraitp-value
GCST000242_3Urate levels3.000000e-60
GCST000418_5Uric acid levels1.000000e-10
GCST000418_9Uric acid levels2.000000e-18
GCST000581_5Urate levels1.000000e-13
GCST000818_3Urate levels3.000000e-23
GCST000818_5Urate levels1.000000e-75
GCST001247_2Cardiovascular disease risk factors2.000000e-17
GCST001268_3Gout3.000000e-12
GCST001269_4Serum uric acid levels2.000000e-20
GCST001374_6Uric acid levels5.000000e-06
GCST001408_3Response to statins (LDL cholesterol change)2.000000e-15
GCST001608_3Renal function-related traits (urate)4.000000e-30
GCST001713_23Dental caries7.000000e-08
GCST001726_3Lipoprotein-associated phospholipase A2 activity change in response to statin therapy2.000000e-10
GCST001790_4Gout2.000000e-32
GCST001791_5Urate levels1.000000e-134
GCST002355_1Serum uric acid levels3.000000e-42
GCST002355_2Serum uric acid levels3.000000e-18
GCST002355_3Serum uric acid levels4.000000e-20
GCST002650_2Coffee consumption (cups per day)9.000000e-08
GCST002773_1Gout7.000000e-54
GCST002828_1Urate levels in obese individuals9.000000e-08
GCST002828_32Urate levels in obese individuals1.000000e-07
GCST002829_31Urate levels in overweight individuals2.000000e-30
GCST002829_39Urate levels in overweight individuals2.000000e-11
GCST002829_41Urate levels in overweight individuals1.000000e-22
GCST002830_10Urate levels in lean individuals1.000000e-22
GCST002830_25Urate levels in lean individuals2.000000e-29
GCST002830_7Urate levels in lean individuals6.000000e-13
GCST002989_5LDL peak particle diameter (total fat intake interaction)9.000000e-06

EFO canonical traits (13, from GWAS)

EFO IDTrait name
EFO:0004531urate measurement
EFO:0004761uric acid measurement
EFO:0007804LDL cholesterol change measurement
EFO:0004746lipoprotein-associated phospholipase A(2) measurement
EFO:0004330coffee consumption
EFO:0006782cups of coffee per day measurement
EFO:0007677LDL peak particle diameter measurement
EFO:0007678total fat intake measurement
EFO:0009104hyperuricemia
EFO:0010089bitter beverage consumption measurement
EFO:0006781coffee consumption measurement
EFO:0010091tea consumption measurement
EFO:0004346neuroimaging measurement

MeSH disease descriptors (2)

DescriptorNameTree numbers
D061325Hereditary Breast and Ovarian Cancer SyndromeC04.588.180.483; C04.588.322.455.431; C04.700.517; C12.050.351.500.056.630.705.431; C12.050.351.937.418.685.431; C12.100.250.056.630.705.431; C12.900.418.685.431; C16.320.700.517; C17.800.090.500.483; C19.344.410.431; C19.391.630.705.431
D016891Polycystic Kidney, Autosomal DominantC12.050.351.968.419.403.875.500; C12.200.777.419.403.875.500; C12.950.419.403.875.500; C16.131.077.717.500; C16.320.184.625.500

Drugs & pharmacology

Drug and pharmacology data

Is drug target: yes

ChEMBL targets (1): CHEMBL5393 (SINGLE PROTEIN)

Molecules with ChEMBL bioactivity

92 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 561,299 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).

MoleculeNamePhasePatents
CHEMBL1014CANDESARTAN CILEXETIL411,194
CHEMBL1017TELMISARTAN427,457
CHEMBL114SAQUINAVIR439,899
CHEMBL1163ATAZANAVIR422,094
CHEMBL1164729FEBUXOSTAT43,499
CHEMBL1171837PONATINIB48,955
CHEMBL1219RABEPRAZOLE412,441
CHEMBL1229211DOLUTEGRAVIR43,337
CHEMBL1289494TIVOZANIB44,455
CHEMBL1292CLOFAZIMINE415,481
CHEMBL1336SORAFENIB486,060
CHEMBL1397POSACONAZOLE4541
CHEMBL1405ESTRONE436,722
CHEMBL1428NIMODIPINE432,587
CHEMBL1450ATOVAQUONE414,589
CHEMBL1484NICARDIPINE430,866
CHEMBL1487ATORVASTATIN468,788
CHEMBL1502PANTOPRAZOLE414,689
CHEMBL1503OMEPRAZOLE452,284
CHEMBL157101KETOCONAZOLE475,361
CHEMBL160CYCLOSPORINE4
CHEMBL163RITONAVIR4
CHEMBL1630575CASPOFUNGIN4
CHEMBL1738797ALECTINIB4
CHEMBL175691RILPIVIRINE4
CHEMBL191LOSARTAN4
CHEMBL193NIFEDIPINE4
CHEMBL1946170REGORAFENIB4
CHEMBL2095208COBICISTAT4
CHEMBL2103830FOSTAMATINIB4

PharmGKB: 1 entry (VIP=true, CPIC=true)

PharmGKB clinical annotations

53 annotations.

VariantTypeLevelDrugsPhenotypes
rs10011796Efficacy4allopurinol
rs1061018Other3dasatinib;imatinib;nilotinib
rs12505410Efficacy3imatinibChronic myelogenous leukemia;BCR-ABL1 positive
rs12505410Metabolism/PK3methotrexateOsteosarcoma
rs13120400Efficacy3methotrexatePsoriasis
rs13120400Efficacy3imatinibChronic myelogenous leukemia;BCR-ABL1 positive
rs13120400Efficacy,Metabolism/PK3deferasiroxBeta-thalassemia and related diseases
rs13120400Metabolism/PK3ceftriaxoneCentral Nervous System Infectious Disorder
rs13120400Metabolism/PK3methotrexateOsteosarcoma
rs13137622Metabolism/PK3methotrexateOsteosarcoma
rs17731538Efficacy3methotrexatePsoriasis
rs2199936Efficacy3rosuvastatin
rs2231135Toxicity3methotrexateOsteosarcoma
rs2231137Toxicity3irinotecanNon-Small Cell Lung Carcinoma
rs2231137Other3dasatinib;imatinib;nilotinib
rs2231137Dosage3imatinibDrug Toxicity;Gastrointestinal Stromal Tumors
rs2231142Metabolism/PK1Arosuvastatin
rs2231142Metabolism/PK3tenofovirHIV infectious disease
rs2231142Metabolism/PK3dolutegravirHIV infectious disease
rs2231142Toxicity3methotrexateRheumatoid arthritis
rs2231142Metabolism/PK3apixabanAtrial Fibrillation
rs2231142Efficacy,Toxicity3gemcitabineNon-Small Cell Lung Carcinoma
rs2231142Efficacy3Opioid anesthetics;Other general anesthetics;volatile anesthetics
rs2231142Toxicity3cyclophosphamide;doxorubicin;fluorouracilBreast Neoplasms
rs2231142Toxicity3sunitinibNeoplasms
rs2231142Metabolism/PK3lamotrigineEpilepsy
rs2231142Other3atorvastatin
rs2231142Toxicity1Arosuvastatinstatin-related myopathy
rs2231142Metabolism/PK3simvastatin
rs2231142Metabolism/PK3fluvastatin
rs2231142Toxicity3atorvastatin
rs2231142Toxicity4gefitinibLung Neoplasms
rs2231142Efficacy4capecitabine;fluorouracil;leucovorin;oxaliplatinColorectal Neoplasms
rs2231142Metabolism/PK4methotrexateAcute lymphoblastic leukemia;Burkitt Lymphoma;Lymphoma;T-Cell;Osteosarcoma
rs2231142Toxicity4methotrexateAcute lymphoblastic leukemia;Burkitt Lymphoma;Drug Toxicity;Lymphoma;T-Cell;Osteosarcoma
rs2231142Efficacy1AallopurinolGout
rs2231142Dosage1AallopurinolGout
rs2231142Efficacy2ArosuvastatinHypercholesterolemia;Myocardial Infarction
rs2231142Toxicity3efavirenzHIV infectious disease
rs2231142Efficacy3sulfasalazineRheumatoid arthritis

PharmGKB variants

53 variants.

VariantGenesLevelScore#Clin annotsDrugs
rs1061018ABCG230.001dasatinib;imatinib;nilotinib
rs1481012ABCG20.000
rs2231135ABCG232.251methotrexate
rs2231137ABCG233.753irinotecan;dasatinib;imatinib;nilotinib;imatinib
rs2231142ABCG21A115.6226rosuvastatin;atorvastatin;cyclophosphamide;doxorubicin;fluorouracil;allopurinol;simvastatin;fluvastatin;efavirenz;tenofovir;dolutegravir;Opioid anesthetics;Other general anesthetics;volatile anesthetics
rs2231148ABCG20.000
rs2231164ABCG20.000
rs2622604ABCG20.000
rs2622628ABCG20.000
rs2725252ABCG232.001imatinib
rs2725256ABCG20.000
rs3109823ABCG20.000
rs3114018ABCG20.000
rs3114020ABCG230.751lamotrigine
rs3219191ABCG20.000
rs4148157ABCG231.752allopurinol;topotecan
rs7699188ABCG236.001fluorouracil;irinotecan;leucovorin
rs10011796ABCG24-1.501allopurinol
rs12505410ABCG232.002methotrexate;imatinib
rs13120400ABCG234.255methotrexate;ceftriaxone;imatinib;deferasirox
rs17731538ABCG232.751methotrexate
rs17731799ABCG20.000
rs41282401ABCG230.001dasatinib;imatinib;nilotinib
rs45605536ABCG230.001dasatinib;imatinib
rs58818712ABCG230.001dasatinib;imatinib
rs72552713ABCG230.121sulfasalazine
rs2725264ABCG20.000
rs9999111ABCG20.000
rs2725263ABCG20.000
rs1564481ABCG20.000
rs13137622ABCG232.001methotrexate
rs2622621ABCG20.000
rs6857600ABCG20.000
rs45499402ABCG20.000
rs4148155ABCG230.001allopurinol
rs76979899ABCG230.001allopurinol
rs1448784ABCG20.000
rs569310717ABCG20.000
rs149106245ABCG20.000
rs769734146ABCG20.000

PharmGKB dosing guidelines

3 guidelines.

SourceDrugGuidelineDosing?Recommendation?
CPICatorvastatin;fluvastatin;lovastatin;pitavastatin;pravastatin;simvastatinAnnotation of CPIC Guideline for atorvastatin, fluvastatin, lovastatin, pitavastatin, pravastatin, simvastatin and ABCG2
CPICrosuvastatinAnnotation of CPIC Guideline for rosuvastatin and ABCG2, SLCO1B1yesyes
DPWGallopurinolAnnotation of DPWG Guideline for allopurinol and ABCG2yesyes

GtoPdb / IUPHAR curated pharmacology

(IUPHAR/BPS Guide to Pharmacology — expert-curated)

Target class: transporter — ABCG subfamily

Most potent curated ligand interactions (5 total), top 5:

LigandActionAffinityParameter
elacridarInhibition6.71pIC50
cyclosporin AInhibition6.3pKi
KS 176Inhibition6.23pIC50
compound 14 [PMID: 30925062]Non-competitive5.62pIC50
nobiletinInhibition5.36pIC50

Binding affinities (BindingDB)

48 measured of 52 human assays (53 total across all organisms); most potent 48 below. Values come from heterogeneous assays and are not directly comparable.

LigandMeasureValuePatent
3-chloranyl-N-[2-chloranyl-5-(trifluoromethyl)phenyl]-6-(3,5-dimethylpyrazol-1-yl)pyridine-2-carboxamideEC50240 nM
2-methoxy-N-(2-morpholinophenyl)-5-(phthalimidomethyl)benzamideEC50340 nM
(E)-3-[3-(4-methoxyphenyl)-1-phenyl-4-pyrazolyl]-1-[4-(2-pyridinyl)-1-piperazinyl]-2-propen-1-oneEC50410 nM
(4-cyanophenyl)methyl 3-nitro-4-pyrrolidin-1-yl-benzoateEC50450 nM
N-[(E)-[3-[[4-(4-fluorophenyl)-1-piperazinyl]methyl]-4-methoxyphenyl]methylideneamino]-4-hydroxy-3-methoxybenzamideEC50760 nM
Fumitremorgin CIC50790 nM
(6E)-6-[4-(3,5-dimethyl-1-piperidinyl)-1H-quinazolin-2-ylidene]-2-methoxy-1-cyclohexa-2,4-dienoneEC501040 nM
CHEMBL4209777IC501060 nM
N-[5-(dimethylamino)-2-[4-morpholinyl-[3-(trifluoromethyl)anilino]phosphoryl]phenyl]-2-thiophenecarboxamideEC501210 nM
3,4,5-trimethoxy-N-[4-(propan-2-ylsulfamoyl)phenyl]benzamideEC501320 nM
(6-nitro-4H-1,3-benzodioxin-8-yl)methyl 2-(benzenesulfonamido)-3-methylbutanoateEC501570 nM
3-keto-2-(2-methoxyethyl)-N-p-phenetyl-isoindoline-4-carboxamideEC501600 nM
2-[[1-oxo-2-(2-pyrimidinylthio)ethyl]amino]-6-(phenylmethyl)-5,7-dihydro-4H-thieno[2,3-c]pyridine-3-carboxylic acid ethyl esterEC501880 nM
(2S,5S,8S)-14-methoxy-5,13-dimethyl-2-(2-methylpropyl)-3,6,17-triazatetracyclo[8.7.0.03,8.011,16]heptadeca-1(10),11,13,15-tetraene-4,7-dioneIC501980 nMUS-9695174: Inhibitor of breast cancer resistance protein (BCRP)
N-[2-[diethylamino-[3-(trifluoromethyl)anilino]phosphoryl]-5-(dimethylamino)phenyl]-2-furamideEC502290 nM
NSC19139IC502600 nM
4-(dimethylamino)benzoic acid [2-(2-ethoxyanilino)-2-oxo-1-phenylethyl] esterEC502750 nM
tert-butyl 3-[(2S,5S,8S)-2-(2-methylpropyl)-4,7-dioxo-3,6,17-triazatetracyclo[8.7.0.03,8.011,16]heptadeca-1(10),11,13,15-tetraen-5-yl]propanoateIC503250 nMUS-9695174: Inhibitor of breast cancer resistance protein (BCRP)
NSC375985IC503700 nM
2-[4-(4-cyanophenyl)phenoxy]-N-(2-phenylethyl)acetamideEC503760 nM
2-[(2-fluoranyl-6-nitro-phenyl)methylsulfanyl]-4,6-dimethyl-pyridine-3-carbonitrileEC503820 nM
NSC168201IC503900 nM
(4E)-4-(dimethylaminomethylene)-5-methyl-2-(4-nitrophenyl)-2-pyrazolin-3-oneEC504000 nM
2-fluoranyl-N-[(E)-[3-[[4-(4-fluorophenyl)piperazin-1-yl]methyl]-4-methoxy-phenyl]methylideneamino]benzamideEC504070 nM
NSC120688IC504300 nM
2-[7-[butyl(methyl)amino]-4,4a,5,6-tetrahydro-3H-naphthalen-2-ylidene]malononitrileEC504420 nM
cid_223753IC504500 nM
NSC320852IC504600 nM
4-[1-[benzyl-[2-(2-thienyl)acetyl]amino]-2-(cyclohexylamino)-2-keto-ethyl]benzoic acid methyl esterEC504600 nM
2-[[4-chloranyl-6-[(4-nitrophenyl)amino]-1,3,5-triazin-2-yl]amino]ethanolEC504630 nM
3-(5-bromanylfuran-2-yl)-5-(2-nitrophenyl)-1,2,4-oxadiazoleEC504880 nM
NSC306698IC505400 nM
NSC303769IC505800 nM
N-(4-fluorophenyl)-2-methyl-3-(2-pyridin-4-ylethyl)-1-indolizinecarboxamideEC506840 nM
(Z)-N-[(E)-2-(3,5-dibromo-4-hydroxyphenyl)ethenyl]-3-(4-hydroxyphenyl)-2-methoxyprop-2-enamideIC506900 nMUS-8470888: Botryllamides and method of inhibiting PGP in a mammal afflicted with cancer
DigitoninIC509700 nM
(Z)-N-[(E)-2-(3,5-dibromo-4-methoxyphenyl)ethenyl]-3-(4-hydroxyphenyl)-2-methoxyprop-2-enamideIC5011200 nMUS-8470888: Botryllamides and method of inhibiting PGP in a mammal afflicted with cancer
Botryllamide B, 2IC5011200 nM
3-(quinoxaline-2-carbonylamino)benzoic acid ethyl esterEC5011800 nM
(2S,5S,8S)-14-methoxy-5-methyl-2-(2-methylpropyl)-3,6,17-triazatetracyclo[8.7.0.03,8.011,16]heptadeca-1(10),11,13,15-tetraene-4,7-dioneIC5015400 nMUS-9695174: Inhibitor of breast cancer resistance protein (BCRP)
(Z)-N-[(E)-2-(3-bromo-4-methoxyphenyl)ethenyl]-3-(4-hydroxyphenyl)-2-methoxyprop-2-enamideIC5016400 nMUS-8470888: Botryllamides and method of inhibiting PGP in a mammal afflicted with cancer
Botryllamide D, 4IC5016400 nM
(Z)-3-(4-hydroxyphenyl)-N-[(E)-2-(4-hydroxyphenyl)ethenyl]-2-methoxyprop-2-enamideIC5016700 nMUS-8470888: Botryllamides and method of inhibiting PGP in a mammal afflicted with cancer
(Z)-3-(4-hydroxyphenyl)-2-methoxy-N-[(E)-2-(4-methoxyphenyl)ethenyl]prop-2-enamideIC5023300 nMUS-8470888: Botryllamides and method of inhibiting PGP in a mammal afflicted with cancer
1-keto-7,8-dimethoxy-isothiochromene-3-carboxylic acid isopropyl esterEC5024400 nM
Botryllamide J, 10IC5026900 nM
(Z)-3-(2-cyano-3-hydroxyphenyl)-2-methoxy-N-[(E)-2-phenylethenyl]prop-2-enamideIC5026900 nMUS-8470888: Botryllamides and method of inhibiting PGP in a mammal afflicted with cancer
Botryllamide I, 9IC5041400 nM

ChEMBL bioactivities

1955 potent at pChembl≥5 of 2203 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).

pChemblTypeValueUnitMolecule
10.99EC500.01019nMCHEMBL2141796
10.99EC500.01013nMCHEMBL2145384
10.96EC500.01088nMCHEMBL2142245
10.92EC500.01209nMCHEMBL2137928
10.64EC500.02297nMCHEMBL2141666
10.63EC500.02338nMCHEMBL2130718
10.39EC500.04032nMCHEMBL2140166
10.39EC500.04093nMCHEMBL2137680
10.35EC500.04419nMCHEMBL2135227
10.32EC500.04775nMCHEMBL2133727
9.60EC500.254nMCHEMBL2132526
9.22EC500.6nMCHEMBL4168440
9.05EC500.9nMCHEMBL4561302
9.05EC500.9nMCHEMBL4584493
8.96EC501.1nMCHEMBL4453052
8.92EC501.2nMCHEMBL4159635
8.85EC501.4nMCHEMBL4561302
8.85EC501.4nMCHEMBL4860031
8.82IC501.5nMAVAPRITINIB
8.80EC501.6nMCHEMBL4860031
8.77EC501.7nMCHEMBL4454217
8.70EC501.999nMCHEMBL2133413
8.70EC502nMCHEMBL4101737
8.70EC502nMCHEMBL4172744
8.70EC502nMCHEMBL4591134
8.70EC502nMCHEMBL4454217
8.68EC502.1nMCHEMBL4474920
8.66EC502.2nMCHEMBL4442810
8.66EC502.2nMCHEMBL4453052
8.64EC502.3nMCHEMBL4591134
8.62EC502.4nMCHEMBL4440681
8.62EC502.4nMCHEMBL4592756
8.60EC502.5nMCHEMBL4453052
8.55EC502.8nMCHEMBL4545977
8.55EC502.8nMCHEMBL4584493
8.52EC503nMCHEMBL4073213
8.51EC503.1nMCHEMBL4291291
8.48EC503.3nMCHEMBL4454945
8.48EC503.3nMCHEMBL4589907
8.46EC503.5nMCHEMBL3092485
8.46EC503.5nMCHEMBL4463713
8.46EC503.5nMCHEMBL4877122
8.44EC503.6nMCHEMBL4564209
8.41EC503.9nMCHEMBL4472194
8.40EC504nMCHEMBL4082228
8.40EC504nMCHEMBL4081708
8.40EC504nMCHEMBL4094899
8.40EC504nMCHEMBL4091528
8.40EC504nMCHEMBL4072298
8.40EC504nMCHEMBL4176228

PubChem BioAssay actives

1905 with measured affinity, of 5039 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.

CompoundAssayTypeValueUnit
N-(3-methylsulfanylphenyl)-2-(3-nitrophenyl)quinazolin-4-amine1501277: Activation of ABCG2 ATPase activity (unknown origin) expressed in baculovirus infected high5 cell membranes after 20 mins by ascorbic acid ammonia molybdate reaction based colorimetric assayec500.0006uM
methyl 3-[[2-[4-[2-[2-[2-[4-[4-[4-(6-methyl-4-oxochromen-2-yl)phenoxy]butyl]triazol-1-yl]ethoxy]ethoxy]ethoxy]phenyl]-4-oxochromen-3-yl]oxymethyl]benzoate1525920: Inhibition of BCRP in human MCF7/MX100 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assayec500.0009uM
methyl 3-[[4-oxo-2-[4-[2-[2-[2-[4-[4-(4-oxo-2-phenylchromen-7-yl)oxybutyl]triazol-1-yl]ethoxy]ethoxy]ethoxy]phenyl]chromen-3-yl]oxymethyl]benzoate1525919: Inhibition of BCRP (unknown origin) transfected in HEK293/R2 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assayec500.0009uM
methyl 3-[[2-[4-[2-[2-[4-[3-[1-[2-[2-[4-[3-[(3-methoxycarbonylphenyl)methoxy]-4-oxochromen-2-yl]phenoxy]ethoxy]ethyl]triazol-4-yl]phenyl]triazol-1-yl]ethoxy]ethoxy]phenyl]-4-oxochromen-3-yl]oxymethyl]benzoate1525920: Inhibition of BCRP in human MCF7/MX100 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assayec500.0011uM
N-(3,4-dimethoxyphenyl)-2-(4-methoxyphenyl)quinazolin-4-amine1501277: Activation of ABCG2 ATPase activity (unknown origin) expressed in baculovirus infected high5 cell membranes after 20 mins by ascorbic acid ammonia molybdate reaction based colorimetric assayec500.0012uM
methyl 3-[[2-[4-[2-[2-[2-[4-[[benzyl(2-hydroxyethyl)amino]methyl]triazol-1-yl]ethoxy]ethoxy]ethoxy]phenyl]-4-oxochromen-3-yl]oxymethyl]benzoate1769259: Inhibition of BCRP (unknown origin) transfected in HEK293/R2 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assayec500.0014uM
Avapritinib1916975: Inhibition of ABCG2 (unknown origin)ic500.0015uM
methyl 3-[[4-oxo-2-[4-[2-[2-[2-[4-[2-(4-oxo-2-phenylchromen-7-yl)oxyethoxymethyl]triazol-1-yl]ethoxy]ethoxy]ethoxy]phenyl]chromen-3-yl]oxymethyl]benzoate1525919: Inhibition of BCRP (unknown origin) transfected in HEK293/R2 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assayec500.0017uM
4-[[2-(3-methoxyphenyl)pyrido[2,3-d]pyrimidin-4-yl]amino]phenol1479734: Activation of recombinant human ABCG2 ATPase activity expressed in baculovirus infected High five insect cell membranes after 20 mins by ascorbic acid ammonia molybdate reaction-based colorimetric methodec500.0020uM
N,2-bis(3-nitrophenyl)quinazolin-4-amine1501277: Activation of ABCG2 ATPase activity (unknown origin) expressed in baculovirus infected high5 cell membranes after 20 mins by ascorbic acid ammonia molybdate reaction based colorimetric assayec500.0020uM
methyl 3-[[2-[4-[2-[2-[2-[4-[3-[4-(7-fluoro-4-oxochromen-2-yl)phenoxy]propyl]triazol-1-yl]ethoxy]ethoxy]ethoxy]phenyl]-4-oxochromen-3-yl]oxymethyl]benzoate1525919: Inhibition of BCRP (unknown origin) transfected in HEK293/R2 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assayec500.0020uM
methyl 3-[[2-[4-[2-[2-[4-[[1-[2-[2-[4-[3-[(3-methoxycarbonylphenyl)methoxy]-4-oxochromen-2-yl]phenoxy]ethoxy]ethyl]triazol-4-yl]methoxymethyl]triazol-1-yl]ethoxy]ethoxy]phenyl]-4-oxochromen-3-yl]oxymethyl]benzoate1525920: Inhibition of BCRP in human MCF7/MX100 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assayec500.0021uM
methyl 3-[[2-[4-[2-[2-[4-[[N-[[1-[2-[2-[4-[3-[(3-methoxycarbonylphenyl)methoxy]-4-oxochromen-2-yl]phenoxy]ethoxy]ethyl]triazol-4-yl]methyl]anilino]methyl]triazol-1-yl]ethoxy]ethoxy]phenyl]-4-oxochromen-3-yl]oxymethyl]benzoate1525920: Inhibition of BCRP in human MCF7/MX100 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assayec500.0022uM
methyl 3-[[2-[4-[2-[2-[4-[3-[1-[2-[2-[4-[3-[(3-methoxycarbonylphenyl)methoxy]-4-oxochromen-2-yl]phenoxy]ethoxy]ethyl]triazol-4-yl]propyl]triazol-1-yl]ethoxy]ethoxy]phenyl]-4-oxochromen-3-yl]oxymethyl]benzoate1525920: Inhibition of BCRP in human MCF7/MX100 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assayec500.0024uM
methyl 3-[[2-[4-[2-[2-[2-[4-[4-[1-[2-[2-[2-[4-[3-[(3-methoxycarbonylphenyl)methoxy]-4-oxochromen-2-yl]phenoxy]ethoxy]ethoxy]ethyl]triazol-4-yl]phenyl]triazol-1-yl]ethoxy]ethoxy]ethoxy]phenyl]-4-oxochromen-3-yl]oxymethyl]benzoate1525919: Inhibition of BCRP (unknown origin) transfected in HEK293/R2 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assayec500.0024uM
methyl 3-[[2-[4-[2-[2-[2-[4-[3-[1-[2-[2-[2-[4-[3-[(3-methoxycarbonylphenyl)methoxy]-4-oxochromen-2-yl]phenoxy]ethoxy]ethoxy]ethyl]triazol-4-yl]phenyl]triazol-1-yl]ethoxy]ethoxy]ethoxy]phenyl]-4-oxochromen-3-yl]oxymethyl]benzoate1525919: Inhibition of BCRP (unknown origin) transfected in HEK293/R2 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assayec500.0028uM
4-[[2-(3-methoxyphenyl)pyrido[2,3-d]pyrimidin-4-yl]amino]benzonitrile1479734: Activation of recombinant human ABCG2 ATPase activity expressed in baculovirus infected High five insect cell membranes after 20 mins by ascorbic acid ammonia molybdate reaction-based colorimetric methodec500.0030uM
7-fluoro-2-[4-[3-[1-[2-[2-[2-[4-(6-fluoro-4-oxochromen-2-yl)phenoxy]ethoxy]ethoxy]ethyl]triazol-4-yl]propoxy]phenyl]chromen-4-one1525919: Inhibition of BCRP (unknown origin) transfected in HEK293/R2 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assayec500.0031uM
methyl 3-[[2-[4-[2-[2-[2-[4-[[benzyl-[[1-[2-[2-[2-[4-[3-[(3-methoxycarbonylphenyl)methoxy]-4-oxochromen-2-yl]phenoxy]ethoxy]ethoxy]ethyl]triazol-4-yl]methyl]amino]methyl]triazol-1-yl]ethoxy]ethoxy]ethoxy]phenyl]-4-oxochromen-3-yl]oxymethyl]benzoate1525919: Inhibition of BCRP (unknown origin) transfected in HEK293/R2 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assayec500.0033uM
methyl 3-[[2-[4-[2-[2-[4-[[benzyl-[[1-[2-[2-[4-[3-[(3-methoxycarbonylphenyl)methoxy]-4-oxochromen-2-yl]phenoxy]ethoxy]ethyl]triazol-4-yl]methyl]amino]methyl]triazol-1-yl]ethoxy]ethoxy]phenyl]-4-oxochromen-3-yl]oxymethyl]benzoate1525920: Inhibition of BCRP in human MCF7/MX100 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assayec500.0033uM
methyl 3-[[4-oxo-2-[4-[2-[2-[2-[4-[3-(4-oxo-2-phenylchromen-7-yl)oxypropyl]triazol-1-yl]ethoxy]ethoxy]ethoxy]phenyl]chromen-3-yl]oxymethyl]benzoate1525919: Inhibition of BCRP (unknown origin) transfected in HEK293/R2 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assayec500.0035uM
methyl 3-[[2-[4-[2-[2-[4-[[benzyl(methyl)amino]methyl]triazol-1-yl]ethoxy]ethoxy]phenyl]-4-oxochromen-3-yl]oxymethyl]benzoate1769261: Inhibition of BCRP (unknown origin) expressed in MCF7/MX100 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assayec500.0035uM
2-(3,4-dimethoxyphenyl)-N-(3-nitrophenyl)quinazolin-4-amine1501277: Activation of ABCG2 ATPase activity (unknown origin) expressed in baculovirus infected high5 cell membranes after 20 mins by ascorbic acid ammonia molybdate reaction based colorimetric assayec500.0035uM
methyl 3-[[2-[4-[2-[2-[4-[4-[4-(6-methyl-4-oxochromen-2-yl)phenoxy]butyl]triazol-1-yl]ethoxy]ethoxy]phenyl]-4-oxochromen-3-yl]oxymethyl]benzoate1525919: Inhibition of BCRP (unknown origin) transfected in HEK293/R2 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assayec500.0036uM
methyl 3-[[2-[4-[2-[2-[2-[4-[[N-[[1-[2-[2-[2-[4-[3-[(3-methoxycarbonylphenyl)methoxy]-4-oxochromen-2-yl]phenoxy]ethoxy]ethoxy]ethyl]triazol-4-yl]methyl]anilino]methyl]triazol-1-yl]ethoxy]ethoxy]ethoxy]phenyl]-4-oxochromen-3-yl]oxymethyl]benzoate1525920: Inhibition of BCRP in human MCF7/MX100 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assayec500.0039uM
tert-butyl 3-[(2S,5S,8S)-14-methoxy-2-(2-methylpropyl)-4,7-dioxo-3,6,17-triazatetracyclo[8.7.0.03,8.011,16]heptadeca-1(10),11,13,15-tetraen-5-yl]propanoate1635795: Inhibition of human ABCG2 expressed in baculovirus infected Sf9 cell membrane assessed as inhibition of vanadate sensitive basal ATPase activity after 20 mins by colorimetric methodic500.0040uM
N-(3-nitrophenyl)-2-pyridin-3-ylpyrido[2,3-d]pyrimidin-4-amine1479734: Activation of recombinant human ABCG2 ATPase activity expressed in baculovirus infected High five insect cell membranes after 20 mins by ascorbic acid ammonia molybdate reaction-based colorimetric methodec500.0040uM
N-(3-nitrophenyl)-2-pyridin-4-ylquinazolin-4-amine1447895: Activation of ABCG2 (unknown origin) ATPase activity expressed in baculovirus infected high five cell membranes by ascorbic acid/ammonia molybdate reaction-based colorimetric analysisec500.0040uM
4-[(2-pyridin-3-ylquinazolin-4-yl)amino]benzonitrile1447895: Activation of ABCG2 (unknown origin) ATPase activity expressed in baculovirus infected high five cell membranes by ascorbic acid/ammonia molybdate reaction-based colorimetric analysisec500.0040uM
N-(4-fluorophenyl)-2-(3-methoxyphenyl)pyrido[2,3-d]pyrimidin-4-amine1479734: Activation of recombinant human ABCG2 ATPase activity expressed in baculovirus infected High five insect cell membranes after 20 mins by ascorbic acid ammonia molybdate reaction-based colorimetric methodec500.0040uM
3-[[2-(3-methoxyphenyl)pyrido[2,3-d]pyrimidin-4-yl]amino]benzonitrile1479734: Activation of recombinant human ABCG2 ATPase activity expressed in baculovirus infected High five insect cell membranes after 20 mins by ascorbic acid ammonia molybdate reaction-based colorimetric methodec500.0040uM
N-(3,4-dimethoxyphenyl)-2-(3-methoxyphenyl)quinazolin-4-amine1501277: Activation of ABCG2 ATPase activity (unknown origin) expressed in baculovirus infected high5 cell membranes after 20 mins by ascorbic acid ammonia molybdate reaction based colorimetric assayec500.0040uM
N-(4-bromo-3-methoxyphenyl)-2-(3,4-dimethoxyphenyl)quinazolin-4-amine1501277: Activation of ABCG2 ATPase activity (unknown origin) expressed in baculovirus infected high5 cell membranes after 20 mins by ascorbic acid ammonia molybdate reaction based colorimetric assayec500.0040uM
2-(3-methoxyphenyl)-N-(3-nitrophenyl)quinazolin-4-amine1501277: Activation of ABCG2 ATPase activity (unknown origin) expressed in baculovirus infected high5 cell membranes after 20 mins by ascorbic acid ammonia molybdate reaction based colorimetric assayec500.0040uM
methyl 3-[[4-oxo-2-[4-[2-[2-[4-[2-(4-oxo-2-phenylchromen-7-yl)oxyethoxymethyl]triazol-1-yl]ethoxy]ethoxy]phenyl]chromen-3-yl]oxymethyl]benzoate1525919: Inhibition of BCRP (unknown origin) transfected in HEK293/R2 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assayec500.0041uM
2-[(2S,5S,8S)-14-methoxy-2-(2-methylpropyl)-4,7-dioxo-3,6,17-triazatetracyclo[8.7.0.03,8.011,16]heptadeca-1(10),11,13,15-tetraen-5-yl]ethyl 2,2-dimethylpropanoate1668468: Reversal of human ABCG2-mediated multidrug resistance in HEK293/R482 cells assessed as effect on mitoxantrone-induced cytotoxicity by measuring mitoxantrone IC50 at 1 uM after 72 hrs by CCK8 assay (Rvb = 50.66 +/- 6.88 nM)ic500.0046uM
2-(3,4-dimethoxyphenyl)-N-(4-nitrophenyl)quinazolin-4-amine1501277: Activation of ABCG2 ATPase activity (unknown origin) expressed in baculovirus infected high5 cell membranes after 20 mins by ascorbic acid ammonia molybdate reaction based colorimetric assayec500.0047uM
N-(4-nitrophenyl)-2-phenylpyrido[2,3-d]pyrimidin-4-amine1479734: Activation of recombinant human ABCG2 ATPase activity expressed in baculovirus infected High five insect cell membranes after 20 mins by ascorbic acid ammonia molybdate reaction-based colorimetric methodec500.0050uM
2-nitro-4-[[2-(3-nitrophenyl)quinazolin-4-yl]amino]phenol1501277: Activation of ABCG2 ATPase activity (unknown origin) expressed in baculovirus infected high5 cell membranes after 20 mins by ascorbic acid ammonia molybdate reaction based colorimetric assayec500.0050uM
tert-butyl 3-[(2S,5S,8S)-14-methoxy-2-(2-methylpropyl)-7-oxo-3,6,17-triazatetracyclo[8.7.0.03,8.011,16]heptadeca-1(10),11,13,15-tetraen-5-yl]propanoate1769268: Inhibition of BCRP (unknown origin) expressed in human HEK293/R2 cells assessed as reversal of mitoxantrone resistance after 5 days by MTS/PMS assayec500.0050uM
methyl 3-[[4-oxo-2-[4-[2-[2-[4-[4-(4-oxo-2-phenylchromen-7-yl)oxybutyl]triazol-1-yl]ethoxy]ethoxy]phenyl]chromen-3-yl]oxymethyl]benzoate1525919: Inhibition of BCRP (unknown origin) transfected in HEK293/R2 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assayec500.0052uM
2-(3-methoxyphenyl)-N-(4-nitrophenyl)quinazolin-4-amine1501277: Activation of ABCG2 ATPase activity (unknown origin) expressed in baculovirus infected high5 cell membranes after 20 mins by ascorbic acid ammonia molybdate reaction based colorimetric assayec500.0060uM
methyl 3-[[2-[4-[4-(1-benzyltriazol-4-yl)butoxy]phenyl]-4-oxochromen-3-yl]oxymethyl]benzoate1769261: Inhibition of BCRP (unknown origin) expressed in MCF7/MX100 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assayec500.0060uM
(E)-3-[4-hydroxy-2-methoxy-5-(2-methylbut-3-en-2-yl)phenyl]-1-(4-hydroxyphenyl)prop-2-en-1-one1668466: Reversal of human ABCG2-mediated multidrug resistance in HEK293/R482 cells assessed as effect on mitoxantrone-induced cytotoxicity by measuring mitoxantrone IC50 at 3 uM after 72 hrs by CCK8 assay (Rvb = 50.66 +/- 6.88 nM)ic500.0062uM
7-[2-[2-[4-[3-[4-(7-fluoro-4-oxochromen-2-yl)phenoxy]propyl]triazol-1-yl]ethoxy]ethoxy]-2-phenylchromen-4-one1525919: Inhibition of BCRP (unknown origin) transfected in HEK293/R2 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assayec500.0064uM
methyl 3-[[2-[4-[2-[2-[4-[3-[4-(7-fluoro-4-oxochromen-2-yl)phenoxy]propyl]triazol-1-yl]ethoxy]ethoxy]phenyl]-4-oxochromen-3-yl]oxymethyl]benzoate1525920: Inhibition of BCRP in human MCF7/MX100 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assayec500.0065uM
2-nitro-4-[(2-pyridin-3-ylquinazolin-4-yl)amino]phenol1447895: Activation of ABCG2 (unknown origin) ATPase activity expressed in baculovirus infected high five cell membranes by ascorbic acid/ammonia molybdate reaction-based colorimetric analysisec500.0070uM
methyl 3-[[4-oxo-2-[4-[2-[2-[4-[3-(4-oxo-2-phenylchromen-7-yl)oxypropyl]triazol-1-yl]ethoxy]ethoxy]phenyl]chromen-3-yl]oxymethyl]benzoate1525919: Inhibition of BCRP (unknown origin) transfected in HEK293/R2 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assayec500.0072uM
7-fluoro-2-[4-[3-[1-[2-[2-[4-(4-oxochromen-2-yl)phenoxy]ethoxy]ethyl]triazol-4-yl]propoxy]phenyl]chromen-4-one1525919: Inhibition of BCRP (unknown origin) transfected in HEK293/R2 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assayec500.0072uM
7-fluoro-2-[4-[3-[1-[2-[2-[2-[4-(4-oxochromen-2-yl)phenoxy]ethoxy]ethoxy]ethyl]triazol-4-yl]propoxy]phenyl]chromen-4-one1525920: Inhibition of BCRP in human MCF7/MX100 cells assessed as reversal of topotecan resistance after 5 days by MTS/PMS assayec500.0074uM

CTD chemical–gene interactions

307 total (human), top 30 by PubMed support.

ChemicalActions (top 5)PubMed papers
Mitoxantroneincreases transport, decreases activity, decreases export, affects export, decreases abundance (+12 more)24
3-(6-isobutyl-9-methoxy-1,4-dioxo-1,2,3,4,6,7,12,12a-octahydropyrazino(1’,2’-1,6)pyrido(3,4-b)indol-3-yl)propionic acid tert-butyl esterdecreases export, decreases activity, increases expression, affects reaction, decreases reaction (+6 more)14
Tetrachlorodibenzodioxindecreases reaction, increases expression, affects cotreatment12
Benzo(a)pyrenedecreases activity, decreases methylation, increases activity, increases reaction, increases expression (+4 more)11
Estradiolincreases expression, increases reaction, affects transport, decreases reaction, increases uptake (+6 more)11
Cisplatinaffects expression, affects response to substance, decreases expression, affects cotreatment, decreases response to substance (+2 more)10
Methotrexateincreases export, affects response to substance, decreases response to substance, increases transport, decreases reaction (+3 more)10
tryptoquivalineincreases export, affects transport, affects uptake, decreases activity, decreases export (+2 more)9
bisbenzimide ethoxide trihydrochloridedecreases activity, decreases export, decreases abundance, increases transport, increases reaction (+6 more)9
Irinotecanaffects response to substance, affects metabolic processing, increases response to substance, affects export, decreases response to substance (+2 more)9
Doxorubicinaffects transport, affects localization, affects cotreatment, decreases reaction, increases export (+7 more)9
Topotecanincreases expression, affects export, increases response to substance, decreases activity, decreases export (+6 more)9
estrone sulfatedecreases reaction, affects export, affects transport, increases export, increases transport (+2 more)7
Sulfasalazinedecreases reaction, increases expression, increases activity, increases transport, affects cotreatment (+4 more)7
Valproic Acidaffects cotreatment, increases expression, affects expression7
Cyclosporinedecreases reaction, increases export, increases transport, decreases activity, increases expression (+2 more)7
2-amino-1-methyl-6-phenylimidazo(4,5-b)pyridineincreases secretion, decreases reaction, increases expression, affects transport, increases export (+4 more)6
Resveratrolincreases export, decreases expression, affects transport, increases transport, increases expression (+2 more)5
Arsenic Trioxideaffects expression, decreases expression, increases expression, decreases reaction, increases reaction5
Fulvestrantaffects cotreatment, increases expression, affects response to substance, affects reaction, decreases expression (+1 more)5
Cadmiumdecreases uptake, affects cotreatment, increases abundance, affects response to substance, affects uptake (+3 more)5
Fluorouracildecreases expression, decreases reaction, decreases response to substance, affects cotreatment, affects response to substance (+1 more)5
Tobacco Smoke Pollutionincreases expression, increases reaction, affects expression, decreases reaction, increases export5
Cadmium Chlorideaffects response to substance, decreases response to substance, decreases activity, affects cotreatment, decreases expression (+7 more)5
bisphenol Aincreases transport, decreases activity, decreases transport, decreases expression, affects reaction (+1 more)4
chrysindecreases expression, increases expression, decreases reaction, increases secretion, increases transport (+2 more)4
Acetaminophendecreases expression, decreases activity, increases expression4
Chlorpyrifosdecreases response to substance, increases expression, affects cotreatment, affects expression4
Novobiocindecreases activity, decreases reaction, decreases export, increases abundance, increases uptake4
Phenobarbitalaffects expression, increases expression4

ChEMBL screening assays

878 unique, capped per target: 651 binding, 115 admet, 111 functional, 1 toxicity

Representative assays (with source publication via chembl_document):

Assay IDTypeDescriptionSource paper
CHEMBL1035250BindingInhibition of BCRP expressed in human MCF7 MX cells at 31.6 uM by Hoechst 33342 staining relative to 10 uM XR9577Aromatic 2-(thio)ureidocarboxylic acids as a new family of modulators of multidrug resistance-associated protein 1: synthesis, biological evaluation, and structure-activity relationships. — J Med Chem
CHEMBL1743158ADMETSubstrates of transporters of clinical importance in the absorption and disposition of drugs, BCRPMembrane transporters in drug development. — Nat Rev Drug Discov
CHEMBL2075183FunctionalTP_TRANSPORTER: inhibition of mitoxantrone efflux in BCRP-expressing MCF7-MX cellsTransport of glyburide by placental ABC transporters: implications in fetal drug exposure. — Placenta

Cellosaurus cell lines

19 cell lines: 16 cancer cell line, 2 spontaneously immortalized cell line, 1 induced pluripotent stem cell

First 10 cell lines (id-ordered, not curated):

CellosaurusNameCategorySex
CVCL_0H87S1-M1-80Cancer cell lineFemale
CVCL_5227OCI-AML3/HaABCG2 clone 6.2Cancer cell lineMale
CVCL_A2KCMDCK-hBCRP cMDR1-KOSpontaneously immortalized cell lineFemale
CVCL_A5XRNCI-H460/TPT10 ABCG2 KOCancer cell lineMale
CVCL_B1EHAbcam A-549 ABCG2 KOCancer cell lineMale
CVCL_B5ZSC2BBe1 BCRP KOCancer cell lineMale
CVCL_B5ZUC2BBe1 MDR1/BCRP KOCancer cell lineMale
CVCL_B5ZXC2BBe1 MRP2/BCRP KOCancer cell lineMale
CVCL_B6A8HepaRG BCRP KOCancer cell lineFemale
CVCL_D6NGOCI-AML3/HaABCG2 clone 3.3Cancer cell lineMale

Clinical trials (associated diseases)

164 trials via MONDO — disease-level, not drug-specific.

TrialPhaseStatusTitle
NCT00414440PHASE4COMPLETEDEfficacy, Safety and Tolerability of Everolimus in Preventing End-stage Renal Disease in Patients With Autosomal Dominant Polycystic Kidney Disease
NCT03273413PHASE4ACTIVE_NOT_RECRUITINGStatin Therapy in Patients With Early Stage ADPKD
NCT03949894PHASE4COMPLETEDEvaluating the Safety and effectivenesS in Adult KorEaN Patients Treated With Tolvaptan for Management of Autosomal domInAnt poLycystic Kidney Disease
NCT02562170PHASE4COMPLETEDProtexa® Versus TiLoopBra® in Immediate Breast Reconstruction- A Pilot Study
NCT00309283PHASE3COMPLETEDSomatostatin in Polycystic Kidney: a Long-term Three Year Follow up Study
NCT00346918PHASE3COMPLETEDSirolimus (Rapamune®) for Autosomal Dominant Polycystic Kidney Disease (ADPKD)
NCT00428948PHASE3COMPLETEDTolvaptan Phase 3 Efficacy and Safety Study in Autosomal Dominant Polycystic Kidney Disease (ADPKD)
NCT01022424PHASE3COMPLETEDA Long-term Administration Study of OPC-41061 in Patients With Autosomal Dominant Polycystic Kidney Disease (ADPKD) (2) [Extension of Study 156-05-002]
NCT01214421PHASE3COMPLETEDTolvaptan Extension Study in Participants With ADPKD
NCT01377246PHASE3COMPLETEDSomatostatin In Patients With Autosomal Dominant Polycystic Kidney Disease And Moderate To Severe Renal Insufficiency
NCT01616927PHASE3UNKNOWNStudy of Lanreotide to Treat Polycystic Kidney Disease
NCT01853553PHASE3COMPLETEDMineralocorticoid Antagonism and Endothelial Dysfunction in Autosomal Dominant Polycystic Kidney Disease (ADPKD)
NCT02115659PHASE3UNKNOWNTriptolide-Containing Formulation as Treatment for Autosomal Dominant Polycystic Kidney Disease (ADPKD)
NCT02134899PHASE3COMPLETEDThe Efficacy of Everolimus in Reducing Total Native Kidney Volume in Polycystic Kidney Disease Transplanted Recipients
NCT02160145PHASE3COMPLETEDEfficacy and Safety of Tolvaptan in Subjects With Chronic Kidney Disease Between Late Stage 2 to Early Stage 4 Due to Autosomal Dominant Polycystic Kidney Disease
NCT02964273PHASE3COMPLETEDSafety, Pharmacokinetics, Tolerability and Efficacy of Tolvaptan in Children and Adolescents With ADPKD (Autosomal Dominant Polycystic Kidney Disease)
NCT03764605PHASE3UNKNOWNMetformin vs Tolvaptan for Treatment of Autosomal Dominant Polycystic Kidney Disease
NCT03918447PHASE3TERMINATEDA Trial of Bardoxolone Methyl in Patients With ADPKD - FALCON
NCT04064346PHASE3TERMINATEDEfficacy and Safety of Lixivaptan in the Treatment of Autosomal Dominant Polycystic Kidney Disease
NCT04152837PHASE3TERMINATEDSafety of Lixivaptan in Subjects Previously Treated With Tolvaptan for Autosomal Dominant Polycystic Kidney Disease
NCT04939935PHASE3RECRUITINGImplementation of Metformin theraPy to Ease Decline of Kidney Function in Polycystic Kidney Disease (IMPEDE-PKD)
NCT05373264PHASE3RECRUITINGHYDROchlorothiazide to PROTECT Polycystic Kidney Disease Patients and Improve Their Quality of Life
NCT00673335PHASE3COMPLETEDLetrozole in Preventing Breast Cancer in Postmenopausal Women With a BRCA1 or BRCA2 Mutation
NCT00685256PHASE3COMPLETEDStandard Genetic Counseling With or Without a Decision Guide in Improving Communication Between Mothers Undergoing BRCA1/2 Testing and Their Minor-Age Children
NCT03162276PHASE3UNKNOWNTrial of Inquiry Based Stress Reduction (IBSR) Program for BRCA1/2 Mutation Carriers
NCT00841568PHASE2COMPLETEDA Long-term Administration Study of OPC-41061 in Patients With Autosomal Dominant Polycystic Kidney Disease (ADPKD) [Extension of Study 156-04-001]
NCT01210560PHASE2COMPLETEDDose-finding Study of New Tolvaptan Formulation in Subjects With ADPKD
NCT01336972PHASE2COMPLETEDShort-term Renal Hemodynamic Effects of Tolvaptan in Subjects With Autosomal Dominant Polycystic Kidney Disease (ADPKD)
NCT01451827PHASE2COMPLETED8-Week Study of Tolvaptan Dose Forms in Autosomal Dominant Polycystic Kidney Disease (ADPKD)
NCT01670110PHASE2COMPLETEDPasireotide LAR in Severe Polycystic Liver Disease
NCT01932450PHASE2UNKNOWNRadiofrequency Ablation for ADPKD Blood Pressure and Disease Progression Control
NCT02527863PHASE2COMPLETEDEffect of the Aquaretic Tolvaptan on Nitric Oxide System
NCT02616055PHASE2TERMINATEDLong-Term Treatment and Follow up of Subjects Completing 24 Months of Treatment With Tesevatinib on Study KD019-101
NCT03203642PHASE2COMPLETEDStudy of the Efficacy and Safety of Tesevatinib in Subjects With ADPKD
NCT03487913PHASE2COMPLETEDThe ELiSA Study - Evaluation of Lixivaptan in Subjects With Autosomal Dominant Polycystic Kidney Disease
NCT03541447PHASE2COMPLETEDTolvaptan-Octreotide LAR Combination in ADPKD
NCT04284657PHASE2COMPLETEDPravastatin and Alkali Therapy in Patients With Autosomal Dominant Polycystic Kidney Disease
NCT04578548PHASE2TERMINATEDA Study to Evaluate the Effects of GLPG2737 in Participants With Autosomal Dominant Polycystic Kidney Disease (ADPKD)
NCT05190744PHASE2COMPLETEDProbenecid (PB) to Treat Hereditary Nephrogenic Diabetes Insipidus (NDI), ADPKD Treated With Tolvaptan, and Severely Polyuric Patients With Previous Lithium Administration
NCT05870007PHASE2ENROLLING_BY_INVITATIONAtorvastatin and Alkali Therapy in Patients With Autosomal Dominant Polycystic Kidney Disease