ABHD11

gene
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Also known as PP1226

Summary

ABHD11 (abhydrolase domain containing 11, HGNC:16407) is a protein-coding gene on chromosome 7q11.23, encoding sn-1-specific diacylglycerol lipase ABHD11 (Q8NFV4). Catalyzes the hydrolysis of diacylglycerol in vitro and may function as a key regulator in lipid metabolism, namely by regulating the intracellular levels of diacylglycerol. 1,2-diacyl-sn-glycerols are the preferred substrate over 1,3-diacyl-sn-glycerols. It is a selective cancer dependency (DepMap: 25.7% of cell lines).

This gene encodes a protein containing an alpha/beta hydrolase fold domain. This gene is deleted in Williams syndrome, a multisystem developmental disorder caused by the deletion of contiguous genes at 7q11.23.

Source: NCBI Gene 83451 — RefSeq curated summary.

At a glance

  • GWAS associations: 4
  • Clinical variants (ClinVar): 194 total — 111 pathogenic, 5 likely-pathogenic
  • Druggable target: yes
  • Cancer dependency (DepMap): dependent in 25.7% of screened cell lines
  • MANE Select transcript: NM_148912

Identifiers

Gene identifiers

FieldValue
HGNC IDHGNC:16407
Approved symbolABHD11
Nameabhydrolase domain containing 11
Location7q11.23
Locus typegene with protein product
StatusApproved
AliasesPP1226
Ensembl geneENSG00000106077
Ensembl biotypeprotein_coding
OMIM621050
Entrez83451

Gene structure

Transcript identifiers

Ensembl transcripts: 23 — 13 protein_coding, 4 nonsense_mediated_decay, 3 retained_intron, 3 protein_coding_CDS_not_defined

ENST00000222800, ENST00000357419, ENST00000395147, ENST00000412965, ENST00000437775, ENST00000437891, ENST00000458339, ENST00000462381, ENST00000468331, ENST00000468998, ENST00000474130, ENST00000480445, ENST00000486114, ENST00000497897, ENST00000906765, ENST00000906766, ENST00000906767, ENST00000906768, ENST00000906769, ENST00000906770, ENST00000906771, ENST00000933786, ENST00000933787

RefSeq mRNA: 4 — MANE Select: NM_148912 NM_001145364, NM_001301058, NM_148912, NM_148913

CCDS: CCDS47607, CCDS47608, CCDS5558, CCDS75615

Canonical transcript exons

ENST00000222800 — 6 exons

ExonStartEnd
ENSE000018340917373864673738802
ENSE000034624437373692973737110
ENSE000035672737373756273737735
ENSE000036127597373609473736691
ENSE000036168897373722173737391
ENSE000036221927373832873738463

Expression profiles

Bgee: expression breadth ubiquitous, 280 present calls, max score 97.55.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 19.5930 / max 457.2273, expressed in 1783 samples.

FANTOM5 promoters (5 alternative TSS)

Promoter IDTPM avgSamples expressed
8432618.08841776
843250.5687235
843270.5616310
843280.3253146
843240.049022

Top tissues by expression

288 total, by Bgee expression score (0-100, higher = more expressed):

TissueAnatomy IDExpression scoreQuality
mucosa of transverse colonUBERON:000499197.55gold quality
metanephros cortexUBERON:001053396.82gold quality
right lobe of thyroid glandUBERON:000111996.00gold quality
left lobe of thyroid glandUBERON:000112095.94gold quality
right uterine tubeUBERON:000130295.56gold quality
thyroid glandUBERON:000204695.28gold quality
olfactory segment of nasal mucosaUBERON:000538694.67gold quality
body of pancreasUBERON:000115094.26gold quality
transverse colonUBERON:000115793.92gold quality
rectumUBERON:000105293.87gold quality
pancreatic ductal cellCL:000207992.47gold quality
minor salivary glandUBERON:000183092.47gold quality
small intestine Peyer’s patchUBERON:000345492.12gold quality
epithelium of bronchusUBERON:000203191.91gold quality
bronchusUBERON:000218591.74gold quality
bronchial epithelial cellCL:000232891.52gold quality
adenohypophysisUBERON:000219691.45gold quality
small intestineUBERON:000210891.18gold quality
mouth mucosaUBERON:000372990.84gold quality
duodenumUBERON:000211490.57gold quality
pituitary glandUBERON:000000790.56gold quality
prostate glandUBERON:000236790.40gold quality
colonic mucosaUBERON:000031790.26gold quality
nasal cavity epitheliumUBERON:000538490.01gold quality
apex of heartUBERON:000209889.89gold quality
saliva-secreting glandUBERON:000104489.77gold quality
granulocyteCL:000009489.72gold quality
nasal cavity mucosaUBERON:000182689.60gold quality
mucosa of sigmoid colonUBERON:000499389.59gold quality
gall bladderUBERON:000211089.36gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

ExperimentMarker?Max mean expression
E-ANND-3yes9.97

Regulation

Is transcription factor: no

miRNA regulators (miRDB)

18 targeting ABHD11, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):

miRNAMax scoreAvg scoremiRNA target_count
HSA-MIR-6778-3P99.9667.292693
HSA-MIR-4524A-3P99.7266.852406
HSA-MIR-1212399.5271.792990
HSA-MIR-664A-3P99.2271.082696
HSA-MIR-7151-3P99.0469.722370
HSA-MIR-511-5P98.9770.942268
HSA-MIR-6889-3P98.8467.351198
HSA-MIR-367-5P98.8467.18902
HSA-MIR-4755-3P98.7765.591915
HSA-MIR-6529-3P98.6866.761020
HSA-MIR-7843-3P98.3167.94803
HSA-MIR-569198.2367.021335
HSA-MIR-6805-3P98.2367.021334
HSA-MIR-6791-3P97.4564.311123
HSA-MIR-6829-3P97.4564.311137
HSA-MIR-214-5P97.3466.50617
HSA-MIR-122-5P97.2364.921024
HSA-MIR-3135A96.4165.30494

Functional genomics

DepMap (CRISPR cell-line fitness): dependent in 25.7% of screened cell lines.

Literature-anchored findings (GeneRIF, showing 8)

  • Abhydrolase domain-containing protein 11 and Esterase D predict the development of distant metastases and the presence of aggressive lung adenocarcinomas. (PMID:21596165)
  • ABHD11-AS1 is expressed in gastric cancer tissues and may have a role as a biological marker (PMID:26280398)
  • The results demonstrate that human ABHD11 and its yeast homolog YGR031W have a pivotal role in the lipid metabolism. (PMID:28465236)
  • that ABHD11-AS1 promotes CRC progression through the miR-1254-WNT11 pathway (PMID:30537177)
  • ABHD11, a new diacylglycerol lipase involved in weight gain regulation. (PMID:32579589)
  • ABHD11 maintains 2-oxoglutarate metabolism by preserving functional lipoylation of the 2-oxoglutarate dehydrogenase complex. (PMID:32792488)
  • Long non-coding RNA ABHD11-AS1 promotes colorectal cancer progression and invasion through targeting the integrin subunit alpha 5/focal adhesion kinase/phosphoinositide 3 kinase/Akt signaling pathway. (PMID:34375304)
  • LncRNA ABHD11-AS1 activates EGFR signaling to promote cervical cancer progression by preventing FUS-mediated degradation of ABHD11 mRNA. (PMID:38146687)

Cross-species orthologs

6 orthologs

OrganismSymbolGene ID
danio_rerioabhd11ENSDARG00000069501
mus_musculusAbhd11ENSMUSG00000040532
rattus_norvegicusAbhd11ENSRNOG00000018910
drosophila_melanogasterCG2059FBGN0029942
drosophila_melanogasterCG14717FBGN0265271
caenorhabditis_elegansabhd-11.2WBGENE00011029

Paralogs (12): ABHD5 (ENSG00000011198), ABHD4 (ENSG00000100439), EPHX3 (ENSG00000105131), MEST (ENSG00000106484), ABHD14B (ENSG00000114779), EPHX2 (ENSG00000120915), ABHD8 (ENSG00000127220), BPHL (ENSG00000137274), ABHD6 (ENSG00000163686), EPHX4 (ENSG00000172031), SERHL2 (ENSG00000183569), ABHD14A (ENSG00000248487)

Protein

Protein identifiers

sn-1-specific diacylglycerol lipase ABHD11Q8NFV4 (reviewed: Q8NFV4)

Alternative names: Alpha/beta hydrolase domain-containing protein 11, Williams-Beuren syndrome chromosomal region 21 protein

All UniProt accessions (5): Q8NFV4, C9J7Q4, H0YC52, H7BZ58, H7C396

UniProt curated annotations — full annotation on UniProt →

Function. Catalyzes the hydrolysis of diacylglycerol in vitro and may function as a key regulator in lipid metabolism, namely by regulating the intracellular levels of diacylglycerol. 1,2-diacyl-sn-glycerols are the preferred substrate over 1,3-diacyl-sn-glycerols. The enzyme hydrolyzes stearate in preference to palmitate from the sn-1 position of 1,2-diacyl-sn-glycerols. Maintains the functional lipoylation of the 2-oxoglutarate dehydrogenase complex (OGDHc) through its interaction with the OGDHc by preventing the formation of lipoyl adducts. In addition, is also required for the expansion and differentiation of embryonic stem cells (ESCs).

Subunit / interactions. Interacts with OGDH and DLST; this interaction maintains the functional lipoylation of the 2-oxoglutarate dehydrogenase complex.

Subcellular location. Mitochondrion. Mitochondrion matrix.

Tissue specificity. Ubiquitously expressed. Highly expressed in small intestine, prostate and thyroid, while aorta and colon tissues exhibit weak expression levels.

Post-translational modifications. Phosphorylated.

Disease relevance. ABHD11 is located in the Williams-Beuren syndrome (WBS) critical region. WBS results from a hemizygous deletion of several genes on chromosome 7q11.23, thought to arise as a consequence of unequal crossing over between highly homologous low-copy repeat sequences flanking the deleted region.

Miscellaneous. May be produced at very low levels due to a premature stop codon in the mRNA, leading to nonsense-mediated mRNA decay. May be produced at very low levels due to a premature stop codon in the mRNA, leading to nonsense-mediated mRNA decay.

Similarity. Belongs to the AB hydrolase superfamily.

Isoforms (6)

UniProt IDNamesCanonical?
Q8NFV4-11, Ayes
Q8NFV4-22, B
Q8NFV4-33, C
Q8NFV4-44, D
Q8NFV4-55, E
Q8NFV4-66

RefSeq proteins (4): NP_001138836, NP_001287987, NP_683710, NP_683711 (=MANE)

Domains & families (InterPro)

IDNameType
IPR000073AB_hydrolase_1Domain
IPR029058AB_hydrolase_foldHomologous_superfamily

Pfam: PF00561

Catalyzed reactions (Rhea), 6 shown:

  • a 1,2-diacyl-sn-glycerol + H2O = a 2-acylglycerol + a fatty acid + H(+) (RHEA:33275)
  • a 1,3-diacyl-sn-glycerol + H2O = a 1-acyl-sn-glycerol + a fatty acid + H(+) (RHEA:38503)
  • 1-octadecanoyl-2-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-sn-glycerol + H2O = 2-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-glycerol + octadecanoate + H(+) (RHEA:38507)
  • 1,2-didecanoylglycerol + H2O = decanoylglycerol + decanoate + H(+) (RHEA:48596)
  • 1-octadecanoyl-2-(9Z-octadecenoyl)-sn-glycerol + H2O = 2-(9Z-octadecenoyl)-glycerol + octadecanoate + H(+) (RHEA:77103)
  • 1-octadecanoyl-2-(4Z,7Z,10Z,13Z,16Z,19Z-docosahexaenoyl)-sn-glycerol + H2O = 2-(4Z,7Z,10Z,13Z,16Z,19Z-docosahexaenoyl)-glycerol + octadecanoate + H(+) (RHEA:77107)

UniProt features (18 total): splice variant 8, active site 3, mutagenesis site 2, transit peptide 1, chain 1, region of interest 1, compositionally biased region 1, modified residue 1

Structure

Experimental structures (PDB)

0 structures.

Predicted structure (AlphaFold)

ModelpLDDTFraction very-high
AF-Q8NFV4-F188.410.83

Functional residue map

Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.

Catalytic / active sites (3): 132 (charge relay system); 228 (charge relay system); 287 (charge relay system)

Post-translational modifications (1): 78

Mutagenesis-validated functional residues (2):

PositionPhenotype
132loss of p-nitrophenyl ester hydrolysis. does not affect mitochondrion location. loss of dlst lipoylation.
287loss of dlst lipoylation.

Function

Pathways and Gene Ontology

Reactome pathways

0 pathways

MSigDB gene sets: 127 (showing top): STARK_PREFRONTAL_CORTEX_22Q11_DELETION_DN, GOBP_LIPID_METABOLIC_PROCESS, ATF4_Q2, chr7q11, IVANOVA_HEMATOPOIESIS_EARLY_PROGENITOR, CUI_TCF21_TARGETS_2_UP, HUANG_DASATINIB_RESISTANCE_DN, GOCC_OXIDOREDUCTASE_COMPLEX, NUYTTEN_EZH2_TARGETS_DN, GOCC_TRANSFERASE_COMPLEX, CHARAFE_BREAST_CANCER_LUMINAL_VS_MESENCHYMAL_UP, GOCC_MITOCHONDRIAL_MATRIX, GOCC_TRICARBOXYLIC_ACID_CYCLE_HETEROMERIC_ENZYME_COMPLEX, GOMF_HYDROLASE_ACTIVITY_ACTING_ON_ESTER_BONDS, GOMF_CARBOXYLIC_ESTER_HYDROLASE_ACTIVITY

GO Biological Process (1): lipid metabolic process (GO:0006629)

GO Molecular Function (4): lipase activity (GO:0016298), carboxylic ester hydrolase activity (GO:0052689), protein binding (GO:0005515), hydrolase activity (GO:0016787)

GO Cellular Component (3): mitochondrion (GO:0005739), mitochondrial matrix (GO:0005759), oxoglutarate dehydrogenase complex (GO:0045252)

GO top-level categories

Rollup of top GO terms by namespace:

CategoryTerms
hydrolase activity, acting on ester bonds2
primary metabolic process1
binding1
catalytic activity1
cytoplasm1
intracellular membrane-bounded organelle1
mitochondrion1
intracellular organelle lumen1
tricarboxylic acid cycle heteromeric enzyme complex1
alpha-ketoacid dehydrogenase complex1
transferase complex1

Protein interactions and networks

STRING

1388 interactions, top by confidence (×1000):

Protein AProtein BPartner UniProtScore
ABHD11PAFAH2Q99487683
ABHD11ABHD6Q9BV23682
ABHD11ABHD10Q9NUJ1605
ABHD11ABHD1Q96SE0588
ABHD11ABHD18Q0P651581
ABHD11ABHD3Q8WU67562
ABHD11IAH1Q2TAA2547
ABHD11ROGDIQ9GZN7534
ABHD11ABHD8Q96I13532
ABHD11ABHD16AO95870531
ABHD11LYPLA1O75608530
ABHD11LYPLA2O95372530
ABHD11ABHD16BQ9H3Z7530
ABHD11ABHD4Q8TB40529
ABHD11ABHD13Q7L211527

IntAct

18 interactions, top by confidence:

ABTypeScore
UQCRFS1NDUFAB1psi-mi:“MI:0914”(association)0.530
Prdm16ESYT2psi-mi:“MI:0914”(association)0.350
MecomESYT2psi-mi:“MI:0914”(association)0.350
ABHD11NME4psi-mi:“MI:0914”(association)0.350
ITM2BILVBLpsi-mi:“MI:0914”(association)0.350
OSTM1ILVBLpsi-mi:“MI:0914”(association)0.350
S100A6VWA8psi-mi:“MI:0914”(association)0.350
UQCRFS1VWA8psi-mi:“MI:0914”(association)0.350
YARS2VWA8psi-mi:“MI:0914”(association)0.350
FAHD1VWA8psi-mi:“MI:0914”(association)0.350
STING1SMCHD1psi-mi:“MI:0914”(association)0.350
NIPSNAP3ANUDT19psi-mi:“MI:0914”(association)0.350
COL10A1PLOD2psi-mi:“MI:0914”(association)0.350

BioGRID (68): ABHD11 (Affinity Capture-MS), PGM1 (Co-fractionation), NME4 (Affinity Capture-MS), ABHD11 (Affinity Capture-MS), BOLA3 (Affinity Capture-MS), DHRS4 (Affinity Capture-MS), HOGA1 (Affinity Capture-MS), BOLA1 (Affinity Capture-MS), ACAD8 (Affinity Capture-MS), ECH1 (Affinity Capture-MS), CHCHD4 (Affinity Capture-MS), C1QBP (Affinity Capture-MS), ABHD11 (Affinity Capture-MS), ABHD11 (Co-fractionation), ABHD11 (Co-fractionation)

ESM2 similar proteins: A1A4L8, A2BDX3, A4RPM5, A5GFZ6, A6NK58, B4FAT0, B4NXF7, B6TNK6, O19179, O43323, O95396, O95571, P19971, P55203, P85971, Q02846, Q05922, Q08DH8, Q0VFH3, Q14BV6, Q17CA7, Q1WNP0, Q3KQV9, Q3TW96, Q3UQ84, Q561R2, Q58E95, Q5PQQ1, Q5ZKI2, Q61488, Q66JK4, Q6PAT0, Q7PY41, Q86U10, Q8AWD2, Q8NFV4, Q8VBZ0, Q8VDG5, Q923K4, Q96EY9

Diamond homologs: A0A061AYY2, A0A061B0Q2, A0A1E3P8S6, A0A1E3P8S8, A0A1E4S2N7, A0A1E4S2P1, A0A1E5RIW9, A0A1E5RUL9, G8JVR4, K0KPV8, K0KSN3, O06734, O07015, P23974, Q6CLY8, Q8NFV4, Q988D4, W0T4A7, A1A9R4, A1JMX1, A4VQH7, A4W922, A6T799, A7MFY0, A7ZKB4, A7ZYW4, A8GCT3, A8IAD8, A9W3H8, B0SW62, B1IV88, B1LIZ6, B1M5I5, B1X9D0, B1ZB18, B5XXN3, B5YU51, B6I985, B7KWT4, B7LFB9

SIGNOR signaling

0 interactions.

Disease & clinical

Clinical variants and AI predictions

ClinVar

194 variants total. Per-class counts are floors (≥ shown; pagination cap):

ClassificationCount (floor)
Pathogenic111
Likely pathogenic5
Uncertain significance63
Likely benign5
Benign0

Top pathogenic / likely-pathogenic (30)

Variant IDHGVSClassification
1330192GRCh37/hg19 7q11.23(chr7:72717345-74133310)x3Pathogenic
146803GRCh38/hg38 7q11.23(chr7:73352303-74719008)x3Pathogenic
146807GRCh38/hg38 7q11.23(chr7:73352303-74719008)x1Pathogenic
146838GRCh38/hg38 7q11.23(chr7:73352303-74924023)x1Pathogenic
147066GRCh38/hg38 7q11.23(chr7:72938064-74779028)x3Pathogenic
147170GRCh38/hg38 7q11.23(chr7:73280574-74924007)x1Pathogenic
147629GRCh38/hg38 7q11.23(chr7:73312582-74725057)x1Pathogenic
148663GRCh38/hg38 7q11.23(chr7:73040501-75255046)x3Pathogenic
149043GRCh38/hg38 7q11.23(chr7:73192369-74779057)x3Pathogenic
149044GRCh38/hg38 7q11.23(chr7:73192369-74779057)x1Pathogenic
149308GRCh38/hg38 7q11.23(chr7:73286412-74727989)x1Pathogenic
149309GRCh38/hg38 7q11.23(chr7:73280574-74727989)x3Pathogenic
149310GRCh38/hg38 7q11.23(chr7:73271690-74727989)x1Pathogenic
150236GRCh38/hg38 7q11.23(chr7:73280574-74779057)x3Pathogenic
150322GRCh38/hg38 7q11.23(chr7:73192369-74869255)x1Pathogenic
151015GRCh38/hg38 7q11.23(chr7:73286412-74869255)x1Pathogenic
151986GRCh38/hg38 7q11.23(chr7:73286412-74779057)x1Pathogenic
152064GRCh38/hg38 7q11.23(chr7:73192369-74883978)x3Pathogenic
153242GRCh38/hg38 7q11.23(chr7:73175475-74740268)x3Pathogenic
153973GRCh38/hg38 7q11.23(chr7:73280574-74727918)x1Pathogenic
153978GRCh38/hg38 7q11.23(chr7:73286522-74727156)x1Pathogenic
154080GRCh38/hg38 7q11.23(chr7:73286508-74727852)x1Pathogenic
154104GRCh38/hg38 7q11.21-11.23(chr7:62977085-75415352)x3Pathogenic
154347GRCh38/hg38 7q11.23(chr7:73280574-74789341)x1Pathogenic
154623GRCh38/hg38 7q11.23(chr7:73352304-75065728)x3Pathogenic
154824GRCh38/hg38 7q11.23(chr7:73286412-74758583)x1Pathogenic
155565GRCh38/hg38 7q11.23(chr7:73304280-74727852)x1Pathogenic
160823GRCh38/hg38 7q11.23(chr7:73352304-74924037)x1Pathogenic
1703588GRCh37/hg19 7q11.23(chr7:72589515-74629034)Pathogenic
1703590GRCh37/hg19 7q11.23(chr7:72645013-74142190)Pathogenic

SpliceAI

826 predictions. Top by Δscore:

VariantEffectΔscore
7:73737733:CAC:Cacceptor_gain1.0000
7:73737736:C:CCacceptor_gain1.0000
7:73737736:CT:Cacceptor_loss1.0000
7:73738326:A:ACdonor_gain1.0000
7:73738326:AC:Adonor_gain1.0000
7:73738327:C:CCdonor_gain1.0000
7:73738327:CC:Cdonor_gain1.0000
7:73738327:CCCTA:Cdonor_gain1.0000
7:73738331:ACGG:Adonor_gain1.0000
7:73738332:CGGC:Cdonor_gain1.0000
7:73738641:CTGA:Cdonor_loss1.0000
7:73738642:TGA:Tdonor_loss1.0000
7:73738643:GACCT:Gdonor_loss1.0000
7:73738645:CCTCG:Cdonor_loss1.0000
7:73736758:G:Cacceptor_gain0.9900
7:73736927:A:ACdonor_gain0.9900
7:73736928:C:CCdonor_gain0.9900
7:73736928:CTG:Cdonor_gain0.9900
7:73737560:AC:Adonor_gain0.9900
7:73737561:CC:Cdonor_gain0.9900
7:73737561:CCCT:Cdonor_gain0.9900
7:73737592:T:Adonor_gain0.9900
7:73737731:AGCAC:Aacceptor_gain0.9900
7:73737732:GCAC:Gacceptor_gain0.9900
7:73737733:CACC:Cacceptor_gain0.9900
7:73737734:AC:Aacceptor_gain0.9900
7:73737735:CC:Cacceptor_gain0.9900
7:73737743:G:Cacceptor_gain0.9900
7:73738332:CGG:Cdonor_gain0.9900
7:73738334:G:GAdonor_gain0.9900

AlphaMissense

2067 scored. Top likely-pathogenic:

VariantProtein changeam_pathogenicity
7:73737712:G:CN104K0.979
7:73737712:G:TN104K0.979
7:73737700:G:CS108R0.978
7:73737700:G:TS108R0.978
7:73737702:T:GS108R0.978
7:73737050:A:GW232R0.970
7:73737050:A:TW232R0.970
7:73736568:G:CF313L0.966
7:73736568:G:TF313L0.966
7:73736570:A:GF313L0.966
7:73737353:G:CS167R0.962
7:73737353:G:TS167R0.962
7:73737355:T:GS167R0.962
7:73737601:G:CS141R0.961
7:73737601:G:TS141R0.961
7:73737603:T:GS141R0.961
7:73736658:G:CF283L0.958
7:73736658:G:TF283L0.958
7:73736660:A:GF283L0.958
7:73737572:G:TA151E0.947
7:73736997:G:CF249L0.946
7:73736997:G:TF249L0.946
7:73736999:A:GF249L0.946
7:73737584:G:TA147D0.945
7:73737602:C:AS141I0.945
7:73737717:G:TR103S0.941
7:73738407:A:TV70D0.940
7:73737585:C:GA147P0.939
7:73736958:A:CF262L0.938
7:73736958:A:TF262L0.938

dbSNP variants (sampled 300 via entrez): RS1000744587 (7:73737854 G>A), RS1000817951 (7:73736609 C>T), RS1002860930 (7:73740308 C>A), RS1002916512 (7:73740167 G>A), RS1003669079 (7:73736362 C>T), RS1004982371 (7:73740138 G>A), RS1005219563 (7:73735736 C>A,T), RS1005332474 (7:73735965 G>A,C,T), RS1005446907 (7:73736293 G>A), RS1006889276 (7:73736837 C>A,G), RS1007002367 (7:73737084 G>A), RS1007388458 (7:73738177 G>A), RS1009006351 (7:73739375 A>G), RS1009058537 (7:73739081 G>A), RS1009502631 (7:73738071 C>T)

Disease associations

OMIM: gene MIM:621050 | disease phenotypes: MIM:194050, MIM:613729, MIM:193250

GenCC curated gene-disease

Mondo (6): Williams syndrome (MONDO:0008678), distal 7q11.23 microdeletion syndrome (MONDO:0013393), breast ductal adenocarcinoma (MONDO:0005590), autism spectrum disorder (MONDO:0005258), volvulus of midgut (MONDO:0008666), neurodevelopmental disorder (MONDO:0700092)

Orphanet (5): Williams syndrome (Orphanet:904), Distal 7q11.23 microdeletion syndrome (Orphanet:254351), OBSOLETE: Familial intestinal malrotation-facial anomalies syndrome (Orphanet:2454), Familial intestinal malrotation (Orphanet:508410), NON RARE IN EUROPE: Autism (Orphanet:106)

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

4 associations (top):

StudyTraitp-value
GCST007203_4Total cholesterol levels2.000000e-06
GCST010725_13Malaria8.000000e-06
GCST010725_74Malaria6.000000e-06
GCST010725_91Malaria7.000000e-06

EFO canonical traits (1, from GWAS)

EFO IDTrait name
EFO:0004574total cholesterol measurement

MeSH disease descriptors (4)

DescriptorNameTree numbers
D018270Carcinoma, Ductal, BreastC04.557.470.200.025.232.500; C04.557.470.615.132.500; C04.588.180.390; C17.800.090.500.390
D065886Neurodevelopmental DisordersF03.625
D018980Williams SyndromeC10.597.606.360.970; C14.280.484.048.750.535.960; C16.131.260.970; C16.320.180.970
C562456Volvulus Of Midgut (supp.)

Drugs & pharmacology

Drug and pharmacology data

Is drug target: yes

ChEMBL targets (1): CHEMBL2189134 (SINGLE PROTEIN)

PharmGKB: 1 entry (VIP=true, CPIC=false)

ChEMBL bioactivities

2 potent at pChembl≥5 of 2 total, top 2 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).

pChemblTypeValueUnitMolecule
9.17IC500.68nMCHEMBL1891894
7.82IC5015nMCHEMBL1891894

PubChem BioAssay actives

3 with measured affinity, of 4 total; 3 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.

CompoundAssayTypeValueUnit
[4-[hydroxy(diphenyl)methyl]triazol-2-yl]-piperidin-1-ylmethanone1079557: Inhibition of ABHD11 (unknown origin)ic500.0300uM
(2-ethylpiperidin-1-yl)-[4-[hydroxy(diphenyl)methyl]triazol-2-yl]methanone1079557: Inhibition of ABHD11 (unknown origin)ic500.0300uM
(4-tert-butylpiperidin-1-yl)-[4-[hydroxy(diphenyl)methyl]triazol-2-yl]methanone1079557: Inhibition of ABHD11 (unknown origin)ic500.0300uM

CTD chemical–gene interactions

52 total (human), top 30 by PubMed support.

ChemicalActions (top 5)PubMed papers
Valproic Acidaffects cotreatment, increases expression4
bisphenol Adecreases expression, increases expression, affects cotreatment2
Cadmium Chlorideincreases expression2
aristolochic acid Idecreases expression1
GSK-J4decreases expression1
sotorasibaffects cotreatment, increases expression1
triphenyl phosphateaffects expression1
beta-lapachoneincreases expression1
tris(1,3-dichloro-2-propyl)phosphatedecreases expression1
sodium arseniteincreases expression1
zinc chromatedecreases expression, increases abundance1
2,3-bis(3’-hydroxybenzyl)butyrolactoneaffects cotreatment, decreases expression1
di-n-butylphosphoric acidaffects expression1
chromium hexavalent iondecreases expression, increases abundance1
tanespimycinaffects cotreatment, decreases expression1
4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamideaffects cotreatment, increases expression1
abrineincreases expression1
dorsomorphinaffects cotreatment, increases expression1
jinfukangincreases expression1
VER 155008affects cotreatment, decreases expression1
NSC 689534affects binding, decreases expression1
trametinibaffects cotreatment, increases expression1
NVP-BKM120affects cotreatment, increases expression1
Resveratrolaffects cotreatment, decreases expression1
Sunitinibdecreases expression1
Air Pollutantsincreases abundance, increases expression1
Cisplatinaffects response to substance1
Copperaffects binding, decreases expression1
Coumestrolaffects cotreatment, decreases expression1
Demecolcinedecreases expression1

ChEMBL screening assays

4 unique, capped per target: 2 binding, 2 functional

Representative assays (with source publication via chembl_document):

Assay IDTypeDescriptionSource paper
CHEMBL2209099BindingInhibition of ABHD11 binding to FP-biotin in [12C][14N]-lysine, arginine and [13C6][15N2]-lysine, arginine labeled HEK293T cells at 20 uM after 1 hr by isotopic activity-based protein profiling-MudPIT assayDiscovery and optimization of sulfonyl acrylonitriles as selective, covalent inhibitors of protein phosphatase methylesterase-1. — J Med Chem
CHEMBL5723266FunctionalAffinity Biochemical interaction: (fluorescence-based biochemical gel-based Activity-Based Protein Profiling (ABPP)) EUB0002643a ABHD11Affinity Biochemical Literature for EUbOPEN Chemogenomic Library

Clinical trials (associated diseases)

300 trials via MONDO — disease-level, not drug-specific.

TrialPhaseStatusTitle
NCT00768820PHASE4RECRUITINGThe Psychiatric and Cognitive Phenotypes in Velocardiofacial Syndrome
NCT04807517PHASE4COMPLETEDBuspirone Treatment of Anxiety in Williams Syndrome
NCT00391261PHASE4COMPLETEDAn Open-label Trial of Metformin for Weight Control of Pediatric Patients on Antipsychotic Medications.
NCT01028820PHASE4COMPLETEDFMRI Brain Activation of Aripiprazole Treatment in Autism Spectrum Disorders
NCT01333865PHASE4COMPLETEDA Study of Memantine Hydrochloride (Namenda®) for Cognitive and Behavioral Impairment in Adults With Autism Spectrum Disorders
NCT01337700PHASE4COMPLETEDMilnacipran in Autism and the Functional Locus Coeruleus and Noradrenergic Model of Autism
NCT01695200PHASE4COMPLETEDOmega-3 Fatty Acids in Autism Spectrum Disorders
NCT02096952PHASE4COMPLETEDMethylphenidate ER Liquid Formulation in Adults With ASD and ADHD
NCT02235467PHASE4COMPLETEDMultisite Study: Parental Training Using Video Modelling to Develop Social Skills in Children With Autism
NCT02940574PHASE4COMPLETEDNeural and Behavioral Effects of Oxytocin in Autism Spectrum Disorders
NCT03333629PHASE4COMPLETEDPromoting Positive Outcomes for Individuals With ASD: Linking Early Detection, Treatment, and Long-term Outcomes
NCT03337646PHASE4COMPLETEDEvaluation of the Effect and Safety of Lisdexamfetamine in Children Aged 6-12 With ADHD and Autism
NCT03538431PHASE4COMPLETEDImproving Driving in Young People With Autism Spectrum Disorders
NCT03757585PHASE4COMPLETEDNatural Treatments for the Management of Emotional Dysregulation in Youth With Non-verbal Learning Disability (NVLD) and/or Autism Spectrum Disorders (ASD)
NCT04903353PHASE4COMPLETEDPragmatic Trial Comparing Weight Gain in Children With Autism Taking Risperidone Versus Aripiprazole
NCT05063656PHASE4COMPLETEDBiomarker-Driven Pharmacological Treatment of Adolescents With Autism Spectrum Disorder With Gabapentin
NCT05146245PHASE4UNKNOWNSafety and Pharmacokinetics of Antipsychotics in Children 2: Studying TDM in an RCT
NCT05916339PHASE4RECRUITINGAWARE: Management of ADHD in Autism Spectrum Disorder
NCT05954052PHASE4TERMINATEDA Study of Glutathione in Children With Autism Spectrum Disorder
NCT06853665PHASE4RECRUITINGThe TEAM Study - Treatment Efficacy for Autism/Attention Using Mixed Amphetamine
NCT07054697PHASE4COMPLETEDPilot-RCT With Individualized Homeopathic Treatment in the Children With Autism Spectrum Disorder
NCT07161804PHASE4COMPLETEDPilot RCT Using Homeopathic Medicines in ASD
NCT07439042PHASE4NOT_YET_RECRUITINGBuspirone for Anxiety in Autistic Youth
NCT03414970PHASE3ACTIVE_NOT_RECRUITINGHypofractionated Radiation Therapy After Mastectomy in Preventing Recurrence in Patients With Stage IIa-IIIa Breast Cancer
NCT01302964PHASE3COMPLETEDMirtazapine Treatment of Anxiety in Children and Adolescents With Pervasive Developmental Disorders
NCT01706523PHASE3TERMINATEDOpen Label Extension Study of STX209 (Arbaclofen) in Autism Spectrum Disorders
NCT01825798PHASE3COMPLETEDTreatment of Overweight Induced by Antipsychotic Medication in Young People With Autism Spectrum Disorders (ASD)
NCT01972074PHASE3COMPLETEDBehavioral and Neural Response to Memantine in Adolescents With Autism Spectrum Disorder
NCT02985749PHASE3COMPLETEDA Study of Oxytocin for the Treatment of Social Impairment in Individuals With High Functioning Autism Spectrum Disorder
NCT03197922PHASE3COMPLETEDTreatment of Encopresis in Children With Autism Spectrum Disorders
NCT03504917PHASE3TERMINATEDA Study of Balovaptan in Adults With Autism Spectrum Disorder With a 2-Year Open-Label Extension
NCT03553875PHASE3TERMINATEDMemantine for the Treatment of Social Deficits in Youth With Disorders of Impaired Social Interactions
NCT03640156PHASE3COMPLETEDModulating Socially Adaptive Mirror System Functioning in Autism by Oxytocin
NCT03715153PHASE3TERMINATEDEfficacy and Safety of Bumetanide Oral Liquid Formulation in Children Aged From 2 to Less Than 7 Years Old With Autism Spectrum Disorder.
NCT03715166PHASE3TERMINATEDEfficacy and Safety of Bumetanide Oral Liquid Formulation in Children and Adolescents Aged From 7 to Less Than 18 Years Old With Autism Spectrum Disorder
NCT04233502PHASE3WITHDRAWNEfficacy and Safety of Slenyto for Insomnia in Children With ASD
NCT04578756PHASE3COMPLETEDOpen-Label, Flexible-dose Study to Evaluate the Long-Term Safety and Tolerability of Cariprazine in the Treatment of Pediatric Participants With Schizophrenia, Bipolar I Disorder, or Autism Spectrum Disorder
NCT04623398PHASE3COMPLETEDEffect of Lithium in Patients With Autism Spectrum Disorder and Phelan-McDermid Syndrome (SHANK3 Haploinsufficiency)
NCT04725383PHASE3TERMINATEDAmitriptyline for Repetitive Behaviors in Autism Spectrum Disorders
NCT05212493PHASE3COMPLETEDThe Effects of Medical Cannabis in Children With Autistic Spectrum Disorder