ACER3-AS1

Summary

ACER3-AS1 (ACER antisense RNA 1, HGNC:58067) is a long non-coding RNA gene on chromosome 11q13.5.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58067
Approved symbol	ACER3-AS1
Name	ACER antisense RNA 1
Location	11q13.5
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000254988
Ensembl biotype	lncRNA
Entrez	124902721
RNAcentral	URS0002A5C9B9 — lncRNA, 814 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000530190, ENST00000804914

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000530190 — 3 exons

Exon	Start	End
ENSE00002159977	76978401	76978619
ENSE00002190266	76955417	76955585
ENSE00002200184	76958834	76959013

Expression profiles

Bgee: expression breadth ubiquitous, 117 present calls, max score 84.79.

Top tissues by expression

117 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
mucosa of transverse colon	UBERON:0004991	84.79	gold quality
rectum	UBERON:0001052	76.05	gold quality
transverse colon	UBERON:0001157	72.59	gold quality
colonic epithelium	UBERON:0000397	71.64	gold quality
body of stomach	UBERON:0001161	71.55	gold quality
corpus callosum	UBERON:0002336	71.45	gold quality
stomach	UBERON:0000945	70.76	gold quality
minor salivary gland	UBERON:0001830	70.09	gold quality
saliva-secreting gland	UBERON:0001044	69.88	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	69.14	gold quality
lower esophagus mucosa	UBERON:0035834	69.03	gold quality
bone marrow cell	CL:0002092	68.81	silver quality
fundus of stomach	UBERON:0001160	66.60	gold quality
duodenum	UBERON:0002114	66.07	gold quality
small intestine	UBERON:0002108	65.73	gold quality
small intestine Peyer’s patch	UBERON:0003454	65.59	gold quality
intestine	UBERON:0000160	65.28	gold quality
colon	UBERON:0001155	65.15	gold quality
esophagus mucosa	UBERON:0002469	62.45	gold quality
monocyte	CL:0000576	61.31	gold quality
muscle tissue	UBERON:0002385	61.08	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	60.98	gold quality
skeletal muscle tissue	UBERON:0001134	58.52	silver quality
vermiform appendix	UBERON:0001154	57.82	gold quality
esophagus	UBERON:0001043	57.62	gold quality
tonsil	UBERON:0002372	57.31	gold quality
bone marrow	UBERON:0002371	56.94	gold quality
urinary bladder	UBERON:0001255	56.20	gold quality
calcaneal tendon	UBERON:0003701	56.16	gold quality
mucosa of stomach	UBERON:0001199	56.14	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.37

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.