ACOT4
gene geneOn this page
Also known as FLJ31235PTE-IbPTE2B
Summary
ACOT4 (acyl-CoA thioesterase 4, HGNC:19748) is a protein-coding gene on chromosome 14q24.3, encoding Peroxisomal succinyl-coenzyme A thioesterase (Q8N9L9). Catalyzes the hydrolysis of acyl-CoAs into free fatty acids and coenzyme A (CoASH), regulating their respective intracellular levels.
Enables fatty acyl-CoA hydrolase activity and succinyl-CoA hydrolase activity. Involved in carboxylic acid metabolic process and succinyl-CoA metabolic process. Located in peroxisome.
Source: NCBI Gene 122970 — RefSeq curated summary.
At a glance
- GWAS associations: 3
- Clinical variants (ClinVar): 80 total
- MANE Select transcript:
NM_152331
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:19748 |
| Approved symbol | ACOT4 |
| Name | acyl-CoA thioesterase 4 |
| Location | 14q24.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | FLJ31235, PTE-Ib, PTE2B |
| Ensembl gene | ENSG00000177465 |
| Ensembl biotype | protein_coding |
| OMIM | 614314 |
| Entrez | 122970 |
Gene structure
Transcript identifiers
Ensembl transcripts: 1 — 1 protein_coding
ENST00000326303
RefSeq mRNA: 1 — MANE Select: NM_152331
NM_152331
CCDS: CCDS9817
Canonical transcript exons
ENST00000326303 — 3 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001248932 | 73593702 | 73593904 |
| ENSE00001248937 | 73595049 | 73595766 |
| ENSE00001296271 | 73591873 | 73592416 |
Expression profiles
Bgee: expression breadth ubiquitous, 169 present calls, max score 92.02.
FANTOM5 (CAGE): breadth broad, TPM avg 1.0914 / max 17.9877, expressed in 468 samples.
FANTOM5 promoters (1 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 140547 | 1.0914 | 468 |
Top tissues by expression
247 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| kidney epithelium | UBERON:0004819 | 92.02 | silver quality |
| ileal mucosa | UBERON:0000331 | 81.33 | gold quality |
| right lobe of liver | UBERON:0001114 | 79.35 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 78.22 | gold quality |
| oocyte | CL:0000023 | 77.60 | silver quality |
| liver | UBERON:0002107 | 77.41 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 76.24 | gold quality |
| adult mammalian kidney | UBERON:0000082 | 74.89 | gold quality |
| buccal mucosa cell | CL:0002336 | 74.60 | gold quality |
| secondary oocyte | CL:0000655 | 74.44 | gold quality |
| prefrontal cortex | UBERON:0000451 | 72.40 | gold quality |
| jejunal mucosa | UBERON:0000399 | 72.03 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 71.57 | gold quality |
| amniotic fluid | UBERON:0000173 | 71.49 | gold quality |
| duodenum | UBERON:0002114 | 71.15 | gold quality |
| kidney | UBERON:0002113 | 70.84 | gold quality |
| upper arm skin | UBERON:0004263 | 70.78 | gold quality |
| decidua | UBERON:0002450 | 70.00 | silver quality |
| islet of Langerhans | UBERON:0000006 | 69.69 | gold quality |
| adipose tissue | UBERON:0001013 | 69.62 | gold quality |
| lower esophagus mucosa | UBERON:0035834 | 69.31 | gold quality |
| frontal cortex | UBERON:0001870 | 68.34 | gold quality |
| placenta | UBERON:0001987 | 67.93 | gold quality |
| subcutaneous adipose tissue | UBERON:0002190 | 67.42 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 67.41 | gold quality |
| cortex of kidney | UBERON:0001225 | 67.23 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 67.15 | gold quality |
| neocortex | UBERON:0001950 | 67.09 | gold quality |
| upper leg skin | UBERON:0004262 | 66.98 | gold quality |
| dorsolateral prefrontal cortex | UBERON:0009834 | 66.94 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 0.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | no | 2.41 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): MYCN
miRNA regulators (miRDB)
8 targeting ACOT4, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-505-3P | 99.19 | 69.71 | 896 |
| HSA-MIR-29A-5P | 99.08 | 68.59 | 1813 |
| HSA-MIR-4724-5P | 98.87 | 67.75 | 1324 |
| HSA-MIR-942-3P | 98.81 | 69.04 | 876 |
| HSA-MIR-3192-3P | 98.62 | 65.80 | 970 |
| HSA-MIR-3920 | 97.75 | 69.02 | 1168 |
| HSA-MIR-665 | 97.60 | 65.64 | 1781 |
| HSA-MIR-4704-5P | 96.13 | 68.67 | 608 |
Literature-anchored findings (GeneRIF, showing 3)
- ACOT4 and ACOT8 are responsible for the termination of beta-oxidation of dicarboxylic acids of medium-chain length with the concomitant release of the corresponding free acids (PMID:16141203)
- Exome sequencing revealed an association with ACOT4 and increased risk of ischemic stroke. (PMID:25961151)
- ACOT4 accumulation via AKT-mediated phosphorylation promotes pancreatic tumourigenesis. (PMID:33148467)
Cross-species orthologs
9 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | acot20 | ENSDARG00000042510 |
| danio_rerio | acot21 | ENSDARG00000042513 |
| danio_rerio | acot22 | ENSDARG00000058945 |
| mus_musculus | Acot4 | ENSMUSG00000052392 |
| rattus_norvegicus | Acot4 | ENSRNOG00000046864 |
| caenorhabditis_elegans | C31H5.6 | WBGENE00007857 |
| caenorhabditis_elegans | WBGENE00019404 | |
| caenorhabditis_elegans | T05E7.1 | WBGENE00020258 |
| caenorhabditis_elegans | W03D8.8 | WBGENE00020989 |
Paralogs (4): ACOT2 (ENSG00000119673), BAAT (ENSG00000136881), ACOT1 (ENSG00000184227), ACOT6 (ENSG00000205669)
Protein
Protein identifiers
Peroxisomal succinyl-coenzyme A thioesterase — Q8N9L9 (reviewed: Q8N9L9)
Alternative names: Acyl-coenzyme A thioesterase 4, PTE-2b, Peroxisomal acyl coenzyme A thioester hydrolase Ib, Peroxisomal long-chain acyl-CoA thioesterase Ib
All UniProt accessions (1): Q8N9L9
UniProt curated annotations — full annotation on UniProt →
Function. Catalyzes the hydrolysis of acyl-CoAs into free fatty acids and coenzyme A (CoASH), regulating their respective intracellular levels. Functions as a peroxisomal succinyl-coenzyme A thioesterase that can also hydrolyze glutaryl-CoA and long chain saturated acyl-CoAs.
Subcellular location. Peroxisome.
Tissue specificity. Strongest expression in liver and kidney and weaker expression in placenta, heart, and muscle.
Pathway. Lipid metabolism; fatty acid biosynthesis.
Miscellaneous. Compared to mouse peroxisomal succinyl-coenzyme A thioesterase/ACOT4, the human enzyme has a broad substrate specificity overlapping the activity of three mouse acyl-coenzyme A thioesterases, providing an explanation for the unexpectedly low number of acyl-coenzyme A thioesterase genes in the human genome.
Similarity. Belongs to the C/M/P thioester hydrolase family.
RefSeq proteins (1): NP_689544* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR006862 | Thio_Ohase/aa_AcTrfase | Domain |
| IPR014940 | BAAT_C | Domain |
| IPR016662 | Acyl-CoA_thioEstase_long-chain | Family |
| IPR029058 | AB_hydrolase_fold | Homologous_superfamily |
| IPR042490 | Thio_Ohase/BAAT_N | Homologous_superfamily |
Pfam: PF04775, PF08840
Catalyzed reactions (Rhea), 11 shown:
- succinyl-CoA + H2O = succinate + CoA + H(+) (RHEA:11516)
- hexadecanoyl-CoA + H2O = hexadecanoate + CoA + H(+) (RHEA:16645)
- dodecanoyl-CoA + H2O = dodecanoate + CoA + H(+) (RHEA:30135)
- octadecanoyl-CoA + H2O = octadecanoate + CoA + H(+) (RHEA:30139)
- decanoyl-CoA + H2O = decanoate + CoA + H(+) (RHEA:40059)
- tetradecanoyl-CoA + H2O = tetradecanoate + CoA + H(+) (RHEA:40119)
- (9Z)-octadecenoyl-CoA + H2O = (9Z)-octadecenoate + CoA + H(+) (RHEA:40139)
- (9Z,12Z)-octadecadienoyl-CoA + H2O = (9Z,12Z)-octadecadienoate + CoA + H(+) (RHEA:40143)
- eicosanoyl-CoA + H2O = eicosanoate + CoA + H(+) (RHEA:40147)
- (5Z,8Z,11Z,14Z)-eicosatetraenoyl-CoA + H2O = (5Z,8Z,11Z,14Z)-eicosatetraenoate + CoA + H(+) (RHEA:40151)
- glutaryl-CoA + H2O = glutarate + CoA + H(+) (RHEA:40575)
UniProt features (45 total): strand 23, helix 9, turn 3, active site 3, sequence variant 2, sequence conflict 2, chain 1, short sequence motif 1, modified residue 1
Structure
Experimental structures (PDB)
1 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 3K2I | X-RAY DIFFRACTION | 2.4 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q8N9L9-F1 | 96.47 | 0.96 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (3): 232 (charge relay system); 326 (charge relay system); 360 (charge relay system)
Post-translational modifications (1): 313
Function
Pathways and Gene Ontology
Reactome pathways
7 pathways
| ID | Pathway |
|---|---|
| R-HSA-390247 | Beta-oxidation of very long chain fatty acids |
| R-HSA-9033241 | Peroxisomal protein import |
| R-HSA-1430728 | Metabolism |
| R-HSA-390918 | Peroxisomal lipid metabolism |
| R-HSA-556833 | Metabolism of lipids |
| R-HSA-8978868 | Fatty acid metabolism |
| R-HSA-9609507 | Protein localization |
MSigDB gene sets: 71 (showing top):
GOBP_ORGANOPHOSPHATE_METABOLIC_PROCESS, GOBP_LONG_CHAIN_FATTY_ACID_METABOLIC_PROCESS, GOBP_MONOCARBOXYLIC_ACID_METABOLIC_PROCESS, KEGG_BIOSYNTHESIS_OF_UNSATURATED_FATTY_ACIDS, GOBP_ORGANIC_ACID_BIOSYNTHETIC_PROCESS, GOBP_DICARBOXYLIC_ACID_METABOLIC_PROCESS, GOBP_NUCLEOBASE_CONTAINING_SMALL_MOLECULE_METABOLIC_PROCESS, GOBP_SMALL_MOLECULE_BIOSYNTHETIC_PROCESS, GOBP_SHORT_CHAIN_FATTY_ACID_METABOLIC_PROCESS, chr14q24, GOBP_AMIDE_METABOLIC_PROCESS, GOBP_ORGANIC_ACID_CATABOLIC_PROCESS, GOBP_VERY_LONG_CHAIN_FATTY_ACID_METABOLIC_PROCESS, GOBP_FATTY_ACID_BIOSYNTHETIC_PROCESS, GOBP_MONOCARBOXYLIC_ACID_BIOSYNTHETIC_PROCESS
GO Biological Process (13): very long-chain fatty acid metabolic process (GO:0000038), long-chain fatty acid metabolic process (GO:0001676), succinyl-CoA metabolic process (GO:0006104), fatty acid metabolic process (GO:0006631), fatty acid biosynthetic process (GO:0006633), acyl-CoA metabolic process (GO:0006637), saturated monocarboxylic acid metabolic process (GO:0032788), unsaturated monocarboxylic acid metabolic process (GO:0032789), dicarboxylic acid metabolic process (GO:0043648), dicarboxylic acid catabolic process (GO:0043649), short-chain fatty acid metabolic process (GO:0046459), lipid metabolic process (GO:0006629), monocarboxylic acid metabolic process (GO:0032787)
GO Molecular Function (5): succinyl-CoA hydrolase activity (GO:0004778), fatty acyl-CoA hydrolase activity (GO:0047617), carboxylic ester hydrolase activity (GO:0052689), hydrolase activity (GO:0016787), thiolester hydrolase activity (GO:0016790)
GO Cellular Component (3): peroxisome (GO:0005777), peroxisomal matrix (GO:0005782), cytosol (GO:0005829)
Reactome top-level categories
Rollup of top-5 pathways:
| Category | Pathways |
|---|---|
| Peroxisomal lipid metabolism | 1 |
| Protein localization | 1 |
| Fatty acid metabolism | 1 |
| Metabolism | 1 |
| Metabolism of lipids | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| fatty acid metabolic process | 4 |
| carboxylic acid metabolic process | 3 |
| monocarboxylic acid metabolic process | 2 |
| acyl-CoA hydrolase activity | 2 |
| hydrolase activity, acting on ester bonds | 2 |
| acyl-CoA metabolic process | 1 |
| lipid metabolic process | 1 |
| lipid biosynthetic process | 1 |
| monocarboxylic acid biosynthetic process | 1 |
| nucleoside phosphate metabolic process | 1 |
| sulfur compound metabolic process | 1 |
| purine-containing compound metabolic process | 1 |
| dicarboxylic acid metabolic process | 1 |
| carboxylic acid catabolic process | 1 |
| primary metabolic process | 1 |
| catalytic activity | 1 |
| microbody | 1 |
| peroxisome | 1 |
| microbody lumen | 1 |
| cytoplasm | 1 |
| cellular anatomical structure | 1 |
Protein interactions and networks
STRING
779 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| ACOT4 | ACOT8 | O14734 | 698 |
| ACOT4 | EHHADH | Q08426 | 667 |
| ACOT4 | ACOX2 | Q99424 | 617 |
| ACOT4 | ACOT13 | Q9NPJ3 | 595 |
| ACOT4 | ACOT9 | Q9Y305 | 577 |
| ACOT4 | ACOT11 | Q8WXI4 | 514 |
| ACOT4 | AFMID | Q63HM1 | 481 |
| ACOT4 | AGXT | P21549 | 469 |
| ACOT4 | ACOT7 | O00154 | 461 |
| ACOT4 | ACOX3 | O15254 | 460 |
| ACOT4 | ACOX1 | Q15067 | 454 |
| ACOT4 | PEX11A | O75192 | 449 |
| ACOT4 | ABHD17B | Q5VST6 | 446 |
| ACOT4 | FAAH | O00519 | 436 |
| ACOT4 | HEATR4 | Q86WZ0 | 428 |
IntAct
4 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| ESRRG | DDX3Y | psi-mi:“MI:0914”(association) | 0.350 |
| MTERF3 | ACOT4 | psi-mi:“MI:0914”(association) | 0.350 |
| MTERF3 | SELENBP1 | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (3): ACOT4 (Affinity Capture-MS), ACOT4 (Affinity Capture-MS), ACOT4 (Protein-peptide)
ESM2 similar proteins: A0JMS7, A2AKK5, A5PJN5, B3MF31, O55137, O55171, O88267, P08587, P10937, P21980, P21981, P34913, P40935, P40936, P49753, P51176, P70683, Q01841, Q14032, Q32Q92, Q3I5F7, Q4V8A1, Q5BJ91, Q5FVR5, Q5R8R3, Q5XHI4, Q60963, Q63276, Q6NTR1, Q6P6V7, Q6Q2C2, Q6Q2Z6, Q6QR59, Q7TS68, Q86TX2, Q8BGG9, Q8BNE1, Q8BWN8, Q8C7R4, Q8N9L9
Diamond homologs: A2AKK5, O55137, O55171, O88267, P49753, Q14032, Q32Q92, Q3I5F7, Q5FVR5, Q63276, Q6Q2Z6, Q86TX2, Q8BGG9, Q8BWN8, Q8N9L9, Q91X34, Q9QYR7, Q9QYR9
SIGNOR signaling
7 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| AKT1 | “up-regulates quantity by stabilization” | ACOT4 | phosphorylation |
| AKT | “up-regulates quantity by stabilization” | ACOT4 | phosphorylation |
| ACOT4 | “up-regulates quantity” | “coenzyme A(4-)” | “chemical modification” |
| ACOT4 | “down-regulates quantity” | succinyl-CoA(5-) | “chemical modification” |
| ACOT4 | “up-regulates quantity” | glutarate(2-) | “chemical modification” |
| ACOT4 | “down-regulates quantity” | glutaryl-CoA(5-) | “chemical modification” |
| HSPA1A | “down-regulates quantity by destabilization” | ACOT4 | binding |
Disease & clinical
Clinical variants and AI predictions
ClinVar
80 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 76 |
| Likely benign | 2 |
| Benign | 1 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
283 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 14:73593697:TCTA:T | acceptor_loss | 1.0000 |
| 14:73593699:TAG:T | acceptor_loss | 1.0000 |
| 14:73593700:A:AG | acceptor_gain | 1.0000 |
| 14:73593701:G:GA | acceptor_loss | 1.0000 |
| 14:73593701:G:GG | acceptor_gain | 1.0000 |
| 14:73593875:GCC:G | donor_gain | 1.0000 |
| 14:73592412:GCCAG:G | donor_gain | 0.9900 |
| 14:73592414:CAG:C | donor_loss | 0.9900 |
| 14:73592415:AG:A | donor_loss | 0.9900 |
| 14:73592416:GG:G | donor_loss | 0.9900 |
| 14:73592417:G:GA | donor_loss | 0.9900 |
| 14:73592418:T:G | donor_loss | 0.9900 |
| 14:73593859:G:GT | donor_gain | 0.9900 |
| 14:73593878:G:GG | donor_gain | 0.9900 |
| 14:73595043:TTCCA:T | acceptor_loss | 0.9900 |
| 14:73595044:TCCAG:T | acceptor_loss | 0.9900 |
| 14:73595045:CCA:C | acceptor_loss | 0.9900 |
| 14:73595046:CA:C | acceptor_loss | 0.9900 |
| 14:73593699:TAGGA:T | acceptor_gain | 0.9800 |
| 14:73593700:AG:A | acceptor_gain | 0.9800 |
| 14:73593701:GG:G | acceptor_gain | 0.9800 |
| 14:73593701:GGA:G | acceptor_gain | 0.9800 |
| 14:73593701:GGAC:G | acceptor_gain | 0.9800 |
| 14:73593872:G:GT | donor_gain | 0.9800 |
| 14:73595047:A:AG | acceptor_gain | 0.9800 |
| 14:73595048:G:GG | acceptor_gain | 0.9800 |
| 14:73592417:G:GG | donor_gain | 0.9700 |
| 14:73593700:AGGA:A | acceptor_gain | 0.9700 |
| 14:73593701:GGACC:G | acceptor_gain | 0.9600 |
| 14:73593900:CCCAG:C | donor_loss | 0.9600 |
AlphaMissense
2713 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 14:73595143:T:A | V252D | 0.979 |
| 14:73593770:A:C | S176R | 0.975 |
| 14:73593772:C:A | S176R | 0.975 |
| 14:73593772:C:G | S176R | 0.975 |
| 14:73592095:T:C | F46L | 0.974 |
| 14:73592097:C:A | F46L | 0.974 |
| 14:73592097:C:G | F46L | 0.974 |
| 14:73592173:T:C | F72L | 0.973 |
| 14:73592175:C:A | F72L | 0.973 |
| 14:73592175:C:G | F72L | 0.973 |
| 14:73592404:T:C | F149L | 0.972 |
| 14:73592406:C:A | F149L | 0.972 |
| 14:73592406:C:G | F149L | 0.972 |
| 14:73595153:T:A | N255K | 0.971 |
| 14:73595153:T:G | N255K | 0.971 |
| 14:73595365:A:C | D326A | 0.971 |
| 14:73595364:G:C | D326H | 0.970 |
| 14:73595601:T:C | F405L | 0.968 |
| 14:73595603:C:A | F405L | 0.968 |
| 14:73595603:C:G | F405L | 0.968 |
| 14:73595102:T:G | C238W | 0.967 |
| 14:73595379:A:C | S331R | 0.967 |
| 14:73595381:T:A | S331R | 0.967 |
| 14:73595381:T:G | S331R | 0.967 |
| 14:73595344:T:C | L319P | 0.966 |
| 14:73592338:C:A | R127S | 0.965 |
| 14:73595365:A:T | D326V | 0.965 |
| 14:73595068:G:A | G227E | 0.963 |
| 14:73592244:G:C | K95N | 0.962 |
| 14:73592244:G:T | K95N | 0.962 |
dbSNP variants (sampled 300 via entrez): RS1000172637 (14:73590448 A>C,G), RS1000236440 (14:73591535 C>T), RS1000562894 (14:73591231 A>G), RS1000696111 (14:73596091 T>C), RS1000912901 (14:73591512 C>T), RS1000946553 (14:73590514 C>T), RS1001641069 (14:73592026 G>A,T), RS1001693459 (14:73591808 T>C), RS1001976554 (14:73590814 T>C), RS1002571461 (14:73594272 A>G), RS1002696206 (14:73593020 A>G), RS1002927779 (14:73594505 A>G), RS1004195349 (14:73595749 C>A,G), RS1004322209 (14:73590189 G>T), RS1004375914 (14:73590081 A>C,G)
Disease associations
OMIM: gene MIM:614314 | disease phenotypes:
GenCC curated gene-disease
Mondo (1): intellectual disability (MONDO:0001071)
Orphanet (1): NON RARE IN EUROPE: Unexplained intellectual disability (Orphanet:319658)
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
3 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST002761_6 | Hippocampal volume | 4.000000e-06 |
| GCST009733_63 | Urinary metabolite levels in chronic kidney disease | 1.000000e-52 |
| GCST009733_91 | Urinary metabolite levels in chronic kidney disease | 2.000000e-25 |
EFO canonical traits (2, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0005035 | hippocampal volume |
| EFO:0005116 | urinary metabolite measurement |
MeSH disease descriptors (1)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D008607 | Intellectual Disability | C10.597.606.360; C23.888.592.604.646; F01.700.687; F03.625.539 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
27 total (human), top 27 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Acetaminophen | decreases expression | 2 |
| Benzo(a)pyrene | decreases expression, decreases methylation | 2 |
| Cyclosporine | decreases expression, increases expression | 2 |
| Aflatoxin B1 | affects expression, decreases expression | 2 |
| Particulate Matter | increases abundance, increases expression | 2 |
| GSK-J4 | decreases expression | 1 |
| propionaldehyde | increases expression | 1 |
| sulforaphane | decreases expression | 1 |
| sodium arsenite | increases expression | 1 |
| butyraldehyde | increases expression | 1 |
| 2,3-bis(3’-hydroxybenzyl)butyrolactone | affects cotreatment, increases expression | 1 |
| nickel sulfate | decreases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| GW 4064 | affects cotreatment, decreases expression | 1 |
| GW 7647 | increases expression, affects cotreatment | 1 |
| 6-(4-chlorophenyl)imidazo(2,1-b)(1,3)thiazole-5-carbaldehyde O-(3,4-dichlorobenzyl)oxime | increases expression, affects cotreatment | 1 |
| abrine | decreases expression | 1 |
| (+)-JQ1 compound | decreases expression | 1 |
| Resveratrol | affects cotreatment, increases expression | 1 |
| Arsenic Trioxide | increases expression | 1 |
| Air Pollutants | increases abundance, increases expression | 1 |
| Arsenic | affects methylation | 1 |
| Coumestrol | affects cotreatment, increases expression | 1 |
| Nickel | decreases expression | 1 |
| Tobacco Smoke Pollution | decreases expression | 1 |
| Oleic Acid | affects cotreatment, increases expression, decreases expression | 1 |
Clinical trials (associated diseases)
197 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT05657860 | PHASE4 | COMPLETED | Guanfacine Extended Release for the Reduction of Aggression and Self-injurious Behavior Associated With Prader-Willi Syndrome |
| NCT05744479 | PHASE4 | RECRUITING | Metformin for Antipsychotic-induced Weight Gain in Adults With Intellectual Disability |
| NCT06107829 | PHASE4 | WITHDRAWN | Valbenazine Treatment of Tardive Dyskinesia in Adults With Intellectual/Developmental Disabilities |
| NCT06997198 | PHASE4 | NOT_YET_RECRUITING | Deutetrabenazine Treatment for Tardive Dyskinesia in Intellectual/Developmental Disabilities |
| NCT02270736 | PHASE3 | COMPLETED | Clinical Study to Investigate the Efficacy and Safety of NT 201 Compared to Placebo in the Treatment of Chronic Troublesome Drooling Associated With Neurological Disorders and/or Intellectual Disability |
| NCT02304302 | PHASE2 | COMPLETED | Down Syndrome Memantine Follow-up Study |
| NCT03862950 | PHASE2 | COMPLETED | A Trial of Metformin in Individuals With Fragile X Syndrome (Met) |
| NCT04529226 | PHASE2 | UNKNOWN | Study to Compare Clozapine vs Treatment as Usual in People With Intellectual Disability & Treatment-resistant Psychosis |
| NCT04821856 | PHASE2 | COMPLETED | Evaluation of the Effectiveness of Cannabidiol in Treating Severe Behavioural Problems in Children and Adolescents With Intellectual Disability |
| NCT05273320 | PHASE1 | COMPLETED | Clinical Trial of Nabilone for Aggression in Adults With Intellectual and Developmental Disabilities |
| NCT05301361 | PHASE1 | ENROLLING_BY_INVITATION | Sensitivity of the NIH Toolbox to Stimulant Treatment in Intellectual Disabilities |
| NCT06016764 | PHASE1 | COMPLETED | Use of MRI and cTBS for Catatonia in Autism |
| NCT06586827 | PHASE1 | COMPLETED | Impact of Competency-Based Training and Technical Assistance Employment Outcomes of Individuals With ID/DD |
| NCT07531940 | PHASE1 | NOT_YET_RECRUITING | Escalating Doses of Memantine in Down Syndrome (MEDS-123) |
| NCT03479476 | PHASE2/PHASE3 | COMPLETED | A Trial of Metformin in Individuals With Fragile X Syndrome |
| NCT02616796 | PHASE1/PHASE2 | COMPLETED | Effects of Social Gaze Training on Brain and Behavior in Fragile X Syndrome |
| NCT06860672 | EARLY_PHASE1 | RECRUITING | Clinical Trial of the Dual Vector Base Editor for the Treatment of the CHD3-R1025W Mutation |
| NCT00597948 | Not specified | COMPLETED | Healthy Lifestyles for People With Intellectual Disabilities |
| NCT01087320 | Not specified | RECRUITING | Genome Medical Sequencing for Gene Discovery |
| NCT01652963 | Not specified | UNKNOWN | Picture-based Computerised Assessment and Training of Cognitive Behaviour Therapy Skills |
| NCT01695395 | Not specified | COMPLETED | Mental Health Care Provision for Adults With Intellectual Disability and a Mental Disorder |
| NCT01867554 | Not specified | COMPLETED | Research and Characterization of New Genes Involved in Intellectual Disability |
| NCT01915381 | Not specified | COMPLETED | Improving Adherence Healthy Lifestyle With a Smartphone Application Based on Adults With Intellectual Disabilities |
| NCT01988623 | Not specified | COMPLETED | Pivotal Response Treatment for Individuals With Intellectual Disabilities |
| NCT02099773 | Not specified | COMPLETED | Support Staff-client Interactions With Augmentative and Alternative Communication |
| NCT02136849 | Not specified | COMPLETED | Inter-regional Project of the Great Western Exploration Approach for Exome Molecular Causes Severe Intellectual Disability Isolated or Syndromic |
| NCT02225041 | Not specified | COMPLETED | Sedation Strategy and Cognitive Outcome After Critical Illness in Early Childhood |
| NCT02414438 | Not specified | COMPLETED | Establishing the Clinical Utility of First StepDx PLUS and NextStepDx PLUS Study |
| NCT02451761 | Not specified | COMPLETED | Apparently Balanced Chromosomal Translocation/ Next-generation Sequencing/ Intellectual Disability |
| NCT02461420 | Not specified | ACTIVE_NOT_RECRUITING | Mapping the Genotype, Phenotype, and Natural History of Phelan-McDermid Syndrome |
| NCT02461459 | Not specified | ACTIVE_NOT_RECRUITING | Autism Spectrum Disorder (ASD) and Intellectual Disability (ID) Determinants in Tuberous Sclerosis Complex (TSC) |
| NCT02486081 | Not specified | COMPLETED | Development and Application-Smart Football for Movement Evaluation and Training in the Special Education Population |
| NCT02504502 | Not specified | COMPLETED | Enhancing Genomic Laboratory Reports to Enhance Communication and Empower Patients |
| NCT02513277 | Not specified | COMPLETED | Diabetes Screening & Prevention for People With Learning (Intellectual) Disabilities:STOP Diabetes Study |
| NCT02561754 | Not specified | COMPLETED | Weight Management for Adolescents With IDD |
| NCT02591446 | Not specified | COMPLETED | Transcranial Magnetic Stimulation Studies in Autism Spectrum Disorders |
| NCT02714868 | Not specified | COMPLETED | Evaluation of Project TEAM (Teens Making Environmental and Activity Modifications) |
| NCT02721394 | Not specified | UNKNOWN | FCT With Young Children With ID in the UK: A Feasibility Project V.1 |
| NCT02746614 | Not specified | COMPLETED | Psychomotor Therapy Effects in Adaptive Behavior and Motor Proficiency in Intellectual Disability |
| NCT02836405 | Not specified | COMPLETED | TMS for the Investigation of Brain Plasticity in Autism Spectrum Disorders |
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.