ACOXL-AS1

Summary

ACOXL-AS1 (ACOXL antisense RNA 1, HGNC:41112) is a long non-coding RNA gene on chromosome 2q13.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41112
Approved symbol	ACOXL-AS1
Name	ACOXL antisense RNA 1
Location	2q13
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000204581
Ensembl biotype	lncRNA
Entrez	400997
RNAcentral	URS000075CC59 — lncRNA, 3212 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000376593, ENST00000418615, ENST00000670010

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000376593 — 3 exons

Exon	Start	End
ENSE00001471032	111098345	111101143
ENSE00001471033	111101897	111102076
ENSE00001711874	111114139	111114185

Expression profiles

Bgee: expression breadth ubiquitous, 128 present calls, max score 74.60.

Top tissues by expression

128 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	74.60	silver quality
bone marrow cell	CL:0002092	73.32	silver quality
hindlimb stylopod muscle	UBERON:0004252	66.44	gold quality
ventricular zone	UBERON:0003053	64.91	gold quality
ganglionic eminence	UBERON:0004023	62.32	gold quality
upper lobe of left lung	UBERON:0008952	62.32	gold quality
lung	UBERON:0002048	62.03	gold quality
right testis	UBERON:0004534	61.89	gold quality
cortical plate	UBERON:0005343	61.75	silver quality
skeletal muscle tissue	UBERON:0001134	61.42	gold quality
testis	UBERON:0000473	61.41	gold quality
left testis	UBERON:0004533	61.26	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	61.14	gold quality
right uterine tube	UBERON:0001302	59.87	gold quality
thyroid gland	UBERON:0002046	59.52	gold quality
prostate gland	UBERON:0002367	59.44	gold quality
left lobe of thyroid gland	UBERON:0001120	59.14	gold quality
right lobe of thyroid gland	UBERON:0001119	59.05	gold quality
right lung	UBERON:0002167	58.98	gold quality
bone marrow	UBERON:0002371	58.94	silver quality
pituitary gland	UBERON:0000007	57.35	gold quality
stromal cell of endometrium	CL:0002255	57.09	gold quality
urinary bladder	UBERON:0001255	56.98	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	56.36	gold quality
adenohypophysis	UBERON:0002196	55.33	gold quality
placenta	UBERON:0001987	55.25	gold quality
granulocyte	CL:0000094	55.06	gold quality
endometrium	UBERON:0001295	54.85	gold quality
prefrontal cortex	UBERON:0000451	54.80	gold quality
primary visual cortex	UBERON:0002436	54.66	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.72

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.