ACSL6-AS1

Summary

ACSL6-AS1 (ACSL6 antisense RNA 1, HGNC:40772) is a long non-coding RNA gene on chromosome 5q31.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40772
Approved symbol	ACSL6-AS1
Name	ACSL6 antisense RNA 1
Location	5q31.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000223548
Ensembl biotype	lncRNA
Entrez	101927693
RNAcentral	URS00026A2633 — lncRNA, 956 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000424244

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000424244 — 2 exons

Exon	Start	End
ENSE00004262808	132003592	132003811
ENSE00004262809	132006320	132007041

Expression profiles

Bgee: expression breadth broad, 70 present calls, max score 93.12.

Top tissues by expression

70 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	93.12	gold quality
ventricular zone	UBERON:0003053	65.92	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	64.85	gold quality
substantia nigra	UBERON:0002038	63.92	gold quality
temporal lobe	UBERON:0001871	63.57	gold quality
amygdala	UBERON:0001876	63.57	gold quality
putamen	UBERON:0001874	62.89	gold quality
ganglionic eminence	UBERON:0004023	62.44	gold quality
nucleus accumbens	UBERON:0001882	62.04	gold quality
caudate nucleus	UBERON:0001873	61.80	gold quality
Ammon’s horn	UBERON:0001954	61.60	gold quality
hypothalamus	UBERON:0001898	60.69	gold quality
prefrontal cortex	UBERON:0000451	59.03	gold quality
brain	UBERON:0000955	58.45	gold quality
cerebral cortex	UBERON:0000956	57.93	gold quality
anterior cingulate cortex	UBERON:0009835	57.72	gold quality
frontal cortex	UBERON:0001870	57.52	gold quality
primary visual cortex	UBERON:0002436	57.00	gold quality
Brodmann (1909) area 9	UBERON:0013540	56.77	gold quality
cortical plate	UBERON:0005343	56.52	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	56.44	gold quality
right frontal lobe	UBERON:0002810	55.80	gold quality
multicellular organism	UBERON:0000468	53.63	gold quality
right adrenal gland cortex	UBERON:0035827	53.50	gold quality
right adrenal gland	UBERON:0001233	52.87	gold quality
corpus callosum	UBERON:0002336	52.64	gold quality
superior frontal gyrus	UBERON:0002661	51.94	gold quality
adrenal gland	UBERON:0002369	51.51	gold quality
left adrenal gland	UBERON:0001234	51.02	gold quality
right hemisphere of cerebellum	UBERON:0014890	50.90	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.98

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.